Multiple sequence alignment - TraesCS1B01G268700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G268700 chr1B 100.000 5653 0 0 1 5653 471749342 471754994 0.000000e+00 10440.0
1 TraesCS1B01G268700 chr1B 92.771 83 5 1 4356 4438 196463212 196463131 9.950000e-23 119.0
2 TraesCS1B01G268700 chr1A 89.744 2691 173 45 1 2628 449933716 449936366 0.000000e+00 3345.0
3 TraesCS1B01G268700 chr1A 94.765 1299 53 8 2622 3907 449936489 449937785 0.000000e+00 2008.0
4 TraesCS1B01G268700 chr1A 86.594 552 42 14 4425 4956 449938039 449938578 1.060000e-161 580.0
5 TraesCS1B01G268700 chr1A 88.462 234 19 6 3986 4216 449937792 449938020 5.580000e-70 276.0
6 TraesCS1B01G268700 chr1A 78.618 463 31 29 5204 5653 449938787 449939194 1.570000e-60 244.0
7 TraesCS1B01G268700 chr1A 92.683 82 5 1 3907 3987 104216544 104216463 3.580000e-22 117.0
8 TraesCS1B01G268700 chr1A 89.024 82 7 2 3907 3987 11940894 11940814 3.600000e-17 100.0
9 TraesCS1B01G268700 chr1A 89.873 79 6 2 3910 3987 574636987 574637064 3.600000e-17 100.0
10 TraesCS1B01G268700 chr1D 89.517 2051 130 45 611 2628 349743217 349745215 0.000000e+00 2518.0
11 TraesCS1B01G268700 chr1D 95.703 1187 41 5 2731 3907 349745418 349746604 0.000000e+00 1901.0
12 TraesCS1B01G268700 chr1D 89.151 636 52 6 1 621 349716761 349717394 0.000000e+00 776.0
13 TraesCS1B01G268700 chr1D 87.365 554 34 17 4425 4956 349746863 349747402 2.250000e-168 603.0
14 TraesCS1B01G268700 chr1D 80.837 454 32 17 5204 5653 349747612 349748014 7.120000e-79 305.0
15 TraesCS1B01G268700 chr1D 89.610 231 21 3 3986 4213 349746611 349746841 1.990000e-74 291.0
16 TraesCS1B01G268700 chr1D 85.621 153 9 4 5052 5204 349747445 349747584 1.270000e-31 148.0
17 TraesCS1B01G268700 chr1D 93.902 82 4 1 3907 3987 101285151 101285232 7.690000e-24 122.0
18 TraesCS1B01G268700 chr1D 89.873 79 6 2 3910 3987 478353796 478353873 3.600000e-17 100.0
19 TraesCS1B01G268700 chr1D 87.654 81 7 2 3907 3984 260569017 260568937 2.170000e-14 91.6
20 TraesCS1B01G268700 chr1D 87.342 79 7 3 3910 3987 365889045 365888969 2.810000e-13 87.9
21 TraesCS1B01G268700 chr1D 84.337 83 11 2 3907 3987 451978954 451978872 4.690000e-11 80.5
22 TraesCS1B01G268700 chr7D 91.121 214 13 2 4215 4425 234351369 234351159 9.270000e-73 285.0
23 TraesCS1B01G268700 chr7D 93.103 87 6 0 4338 4424 177106879 177106793 1.650000e-25 128.0
24 TraesCS1B01G268700 chr7D 93.421 76 3 2 3907 3981 66954808 66954734 1.660000e-20 111.0
25 TraesCS1B01G268700 chr3D 88.596 228 18 4 4202 4425 371367047 371366824 2.600000e-68 270.0
26 TraesCS1B01G268700 chr3D 95.652 138 5 1 4231 4367 283321251 283321114 2.650000e-53 220.0
27 TraesCS1B01G268700 chr3D 92.683 82 5 1 3907 3987 477907440 477907359 3.580000e-22 117.0
28 TraesCS1B01G268700 chr3D 90.588 85 4 4 3907 3987 64194776 64194860 5.990000e-20 110.0
29 TraesCS1B01G268700 chr5D 94.366 142 6 2 4226 4366 447459720 447459580 3.430000e-52 217.0
30 TraesCS1B01G268700 chr5D 94.805 77 3 1 4356 4432 57225979 57226054 9.950000e-23 119.0
31 TraesCS1B01G268700 chr5D 95.775 71 2 1 3907 3976 281024793 281024863 4.630000e-21 113.0
32 TraesCS1B01G268700 chr5D 85.227 88 9 4 3907 3991 28480031 28479945 2.810000e-13 87.9
33 TraesCS1B01G268700 chr2D 91.083 157 11 3 4230 4385 399721463 399721309 5.740000e-50 209.0
34 TraesCS1B01G268700 chr2D 92.683 82 5 1 3907 3987 86080994 86080913 3.580000e-22 117.0
35 TraesCS1B01G268700 chr7A 89.222 167 14 4 4215 4379 439786373 439786537 7.420000e-49 206.0
36 TraesCS1B01G268700 chr5B 88.623 167 15 4 4215 4379 394253629 394253465 3.450000e-47 200.0
37 TraesCS1B01G268700 chr5B 88.623 167 15 4 4215 4379 394256287 394256123 3.450000e-47 200.0
38 TraesCS1B01G268700 chr5A 88.623 167 15 4 4215 4379 311019702 311019866 3.450000e-47 200.0
39 TraesCS1B01G268700 chr4A 100.000 69 0 0 4356 4424 621290194 621290126 1.650000e-25 128.0
40 TraesCS1B01G268700 chr4A 93.827 81 4 1 3908 3987 27643530 27643610 2.770000e-23 121.0
41 TraesCS1B01G268700 chr4B 94.048 84 4 1 3907 3989 41531420 41531503 5.950000e-25 126.0
42 TraesCS1B01G268700 chr4B 92.683 82 4 2 4356 4435 2431963 2431882 3.580000e-22 117.0
43 TraesCS1B01G268700 chr4B 90.805 87 5 2 3907 3992 163758318 163758234 4.630000e-21 113.0
44 TraesCS1B01G268700 chr2B 97.297 74 2 0 4356 4429 58098946 58099019 5.950000e-25 126.0
45 TraesCS1B01G268700 chr6D 92.857 84 6 0 4346 4429 374102467 374102384 7.690000e-24 122.0
46 TraesCS1B01G268700 chr6D 90.244 82 7 1 3907 3987 88776500 88776581 7.750000e-19 106.0
47 TraesCS1B01G268700 chr6D 87.805 82 9 1 3907 3987 27150789 27150870 1.680000e-15 95.3
48 TraesCS1B01G268700 chr6D 90.000 70 5 2 3909 3977 330111490 330111422 7.800000e-14 89.8
49 TraesCS1B01G268700 chr6D 92.000 50 2 2 3909 3958 457730224 457730271 1.020000e-07 69.4
50 TraesCS1B01G268700 chr6D 97.297 37 1 0 3911 3947 467931813 467931849 4.730000e-06 63.9
51 TraesCS1B01G268700 chr6D 94.737 38 2 0 3907 3944 6833151 6833114 6.120000e-05 60.2
52 TraesCS1B01G268700 chr6D 100.000 31 0 0 3909 3939 430388493 430388463 2.200000e-04 58.4
53 TraesCS1B01G268700 chr6D 83.824 68 2 7 3907 3973 211444018 211443959 7.910000e-04 56.5
54 TraesCS1B01G268700 chr6D 96.875 32 0 1 3923 3953 200871676 200871645 1.000000e-02 52.8
55 TraesCS1B01G268700 chr3B 92.683 82 5 1 3907 3987 637089778 637089697 3.580000e-22 117.0
56 TraesCS1B01G268700 chr2A 91.463 82 6 1 3907 3987 86440624 86440543 1.660000e-20 111.0
57 TraesCS1B01G268700 chr4D 88.889 81 6 3 3908 3987 460994903 460994825 4.660000e-16 97.1
58 TraesCS1B01G268700 chrUn 87.805 82 6 2 3907 3987 134242294 134242372 6.030000e-15 93.5
59 TraesCS1B01G268700 chrUn 100.000 28 0 0 3907 3934 346286323 346286296 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G268700 chr1B 471749342 471754994 5652 False 10440.0 10440 100.000000 1 5653 1 chr1B.!!$F1 5652
1 TraesCS1B01G268700 chr1A 449933716 449939194 5478 False 1290.6 3345 87.636600 1 5653 5 chr1A.!!$F2 5652
2 TraesCS1B01G268700 chr1D 349743217 349748014 4797 False 961.0 2518 88.108833 611 5653 6 chr1D.!!$F4 5042
3 TraesCS1B01G268700 chr1D 349716761 349717394 633 False 776.0 776 89.151000 1 621 1 chr1D.!!$F2 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
918 962 1.521616 GGAAGAGAGAGGCAGGCAG 59.478 63.158 0.00 0.00 0.00 4.85 F
1900 1956 0.250124 CCCGTTAGGTGCACTGACAA 60.250 55.000 17.98 2.94 35.55 3.18 F
2349 2423 0.400213 CAGCTTGGGGTGGTGTCTAA 59.600 55.000 0.00 0.00 37.31 2.10 F
3917 4139 0.250338 GGTGGCAATCCCTCCGTATC 60.250 60.000 0.00 0.00 37.50 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2191 2256 0.537371 AGGAAGTGGAACCAAAGGCG 60.537 55.0 0.0 0.0 37.80 5.52 R
3193 3404 0.109781 CCGGTTCGTTTCTGGCAATG 60.110 55.0 0.0 0.0 0.00 2.82 R
4226 4451 0.115745 TGGGACGGAGGGAGTAGTTT 59.884 55.0 0.0 0.0 0.00 2.66 R
5522 5799 0.029035 CCGACTTCGTATGAGACCCG 59.971 60.0 0.0 0.0 37.74 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.912771 CCCACATTGGCGACTACAATA 58.087 47.619 0.00 0.00 36.47 1.90
102 103 3.826729 ACATGCTTTCCCTAAGTTTGGAC 59.173 43.478 4.78 0.00 36.19 4.02
178 180 7.712639 ACATGCCTACTTGTATCTTGTAATCTG 59.287 37.037 0.00 0.00 32.75 2.90
191 193 6.291377 TCTTGTAATCTGGATGATACCTTGC 58.709 40.000 0.00 0.00 34.45 4.01
205 207 7.900782 TGATACCTTGCTGAGTTAGTTAAAC 57.099 36.000 0.00 0.00 38.46 2.01
280 282 5.244626 ACATTTGACCTTCTGAATCCAAAGG 59.755 40.000 15.53 15.53 44.23 3.11
326 328 6.349611 GGCAATCATTGGTATATGGATGTCAC 60.350 42.308 0.00 0.00 0.00 3.67
341 343 6.785076 TGGATGTCACCACCTTAAAAATCTA 58.215 36.000 0.00 0.00 34.77 1.98
342 344 6.884295 TGGATGTCACCACCTTAAAAATCTAG 59.116 38.462 0.00 0.00 34.77 2.43
361 364 6.887376 TCTAGCACAAAATGAATACTCGTC 57.113 37.500 0.00 0.00 0.00 4.20
369 372 6.422701 ACAAAATGAATACTCGTCGTCAAAGA 59.577 34.615 0.00 0.00 0.00 2.52
414 417 8.761575 AGTTAGTTAATTTTCATGGTGCATTG 57.238 30.769 0.00 0.00 0.00 2.82
426 429 5.361571 TCATGGTGCATTGCATCTCTTTTAT 59.638 36.000 21.76 4.07 40.78 1.40
445 448 9.575783 TCTTTTATCGGTTTACAAATTTATGGC 57.424 29.630 0.00 0.00 0.00 4.40
452 457 6.569610 CGGTTTACAAATTTATGGCAGTCTGT 60.570 38.462 0.93 0.00 0.00 3.41
470 475 4.583073 GTCTGTTTGTTTGTAGGGTTGGAT 59.417 41.667 0.00 0.00 0.00 3.41
516 533 3.546815 GCGAATCACTACCACATGAATGC 60.547 47.826 0.00 0.00 0.00 3.56
544 562 9.750125 ATCCTCTTAAAAATCTGAACACAAAAC 57.250 29.630 0.00 0.00 0.00 2.43
608 626 6.693315 AAACCAGATAATTTCCATGGTACG 57.307 37.500 12.58 0.00 43.36 3.67
664 704 5.570234 ACAATCCGTTGTTTGTACTTTGT 57.430 34.783 0.00 0.00 46.07 2.83
665 705 6.680874 ACAATCCGTTGTTTGTACTTTGTA 57.319 33.333 0.00 0.00 46.07 2.41
669 709 3.304190 CCGTTGTTTGTACTTTGTAGGGC 60.304 47.826 0.00 0.00 0.00 5.19
905 949 2.687566 GGAAGCGGGAGGGGAAGA 60.688 66.667 0.00 0.00 0.00 2.87
917 961 1.992277 GGGAAGAGAGAGGCAGGCA 60.992 63.158 0.00 0.00 0.00 4.75
918 962 1.521616 GGAAGAGAGAGGCAGGCAG 59.478 63.158 0.00 0.00 0.00 4.85
920 964 2.591929 GAAGAGAGAGGCAGGCAGGC 62.592 65.000 0.00 0.00 44.61 4.85
1195 1244 3.375299 GTGCATCGCAACCTTATCTCTTT 59.625 43.478 0.00 0.00 41.47 2.52
1208 1257 2.113860 TCTCTTTCCGCAATTCCCTG 57.886 50.000 0.00 0.00 0.00 4.45
1249 1301 3.846430 CTAGGGTTCCGCCGTCCC 61.846 72.222 1.82 1.82 41.36 4.46
1272 1324 2.221981 CCTTTAATTCGCGAGAGGATGC 59.778 50.000 9.59 0.00 43.69 3.91
1279 1331 1.063649 GCGAGAGGATGCGTCGTTA 59.936 57.895 12.27 0.00 36.09 3.18
1334 1386 2.051804 GATTGGATTCGTGCCTGGCG 62.052 60.000 14.98 0.00 0.00 5.69
1377 1429 0.336048 ATTGCATAGCCCCTGGTGTT 59.664 50.000 0.00 0.00 0.00 3.32
1410 1462 3.193263 TCGATTCTTCTCATGCTTCAGC 58.807 45.455 0.00 0.00 42.50 4.26
1432 1484 4.036262 GCTAGCTCGGATATAGAGGATGTG 59.964 50.000 7.70 0.00 36.31 3.21
1437 1489 4.736473 TCGGATATAGAGGATGTGGTTGA 58.264 43.478 0.00 0.00 0.00 3.18
1501 1553 3.676291 GCCAATCTCCTAGGCTAGAAG 57.324 52.381 22.99 12.69 44.92 2.85
1557 1609 2.193447 CAATGCTGATTGTGCTGATGC 58.807 47.619 0.00 0.00 35.19 3.91
1570 1622 2.159000 TGCTGATGCTGTACTCTCCATG 60.159 50.000 0.00 0.00 40.48 3.66
1582 1634 2.948979 ACTCTCCATGAGCTAGAGAACG 59.051 50.000 15.77 4.51 46.41 3.95
1588 1640 4.517075 TCCATGAGCTAGAGAACGATACTG 59.483 45.833 0.00 0.00 0.00 2.74
1589 1641 4.517075 CCATGAGCTAGAGAACGATACTGA 59.483 45.833 0.00 0.00 0.00 3.41
1598 1650 2.103771 AGAACGATACTGATGCAGGCAT 59.896 45.455 6.44 6.44 39.69 4.40
1605 1657 5.008019 CGATACTGATGCAGGCATTAGTTTT 59.992 40.000 28.85 19.66 46.54 2.43
1689 1741 7.044181 TGCTTATGTGATCCTAAACTTCTCTG 58.956 38.462 0.00 0.00 0.00 3.35
1740 1793 7.136822 TGCTATTTATCCTTGGACATACTGT 57.863 36.000 0.00 0.00 0.00 3.55
1745 1798 7.447374 TTTATCCTTGGACATACTGTGTTTG 57.553 36.000 0.00 0.00 42.36 2.93
1804 1859 9.173939 GCATTAGATGTTTTATTCTCAATTCCG 57.826 33.333 0.00 0.00 0.00 4.30
1825 1880 2.030274 GCAAGTGGCTGTTATTTCGGTT 60.030 45.455 0.00 0.00 40.25 4.44
1883 1939 4.816925 GTCTTGATAAACCAGCTGTATCCC 59.183 45.833 13.81 0.00 0.00 3.85
1892 1948 0.464452 AGCTGTATCCCGTTAGGTGC 59.536 55.000 0.00 0.00 36.75 5.01
1895 1951 1.480954 CTGTATCCCGTTAGGTGCACT 59.519 52.381 17.98 5.41 36.75 4.40
1900 1956 0.250124 CCCGTTAGGTGCACTGACAA 60.250 55.000 17.98 2.94 35.55 3.18
1922 1978 6.946583 ACAATGATGAGATAGCCATTATTGCT 59.053 34.615 18.21 0.00 44.73 3.91
1952 2008 4.201960 GCTGCTGTAATTAGGAAAAGGCTC 60.202 45.833 0.00 0.00 0.00 4.70
1955 2011 4.336713 GCTGTAATTAGGAAAAGGCTCCAG 59.663 45.833 0.00 0.00 38.02 3.86
1962 2018 2.216782 GAAAAGGCTCCAGGGAGGGG 62.217 65.000 16.70 0.00 42.19 4.79
2007 2064 8.803397 AATCTGAAATTCTCAACATCTCATCA 57.197 30.769 0.00 0.00 32.17 3.07
2060 2117 2.580276 GCTGCAGCTGAGCTCTCT 59.420 61.111 31.33 9.20 36.40 3.10
2121 2179 9.709495 CATTTCCTTTCTTTTCATTTATGTGGA 57.291 29.630 0.00 0.00 0.00 4.02
2124 2182 9.709495 TTCCTTTCTTTTCATTTATGTGGATTG 57.291 29.630 0.00 0.00 0.00 2.67
2179 2244 4.384647 GGTCCAATCCAGCTCTCTTTATGT 60.385 45.833 0.00 0.00 0.00 2.29
2183 2248 6.384015 TCCAATCCAGCTCTCTTTATGTCTAA 59.616 38.462 0.00 0.00 0.00 2.10
2191 2256 5.813157 GCTCTCTTTATGTCTAACACCTTCC 59.187 44.000 0.00 0.00 0.00 3.46
2198 2263 1.804748 GTCTAACACCTTCCGCCTTTG 59.195 52.381 0.00 0.00 0.00 2.77
2199 2264 1.165270 CTAACACCTTCCGCCTTTGG 58.835 55.000 0.00 0.00 0.00 3.28
2226 2300 1.325355 TCCTGTCGAACTCGTCCTTT 58.675 50.000 0.00 0.00 40.80 3.11
2233 2307 1.865865 GAACTCGTCCTTTGCTGTGA 58.134 50.000 0.00 0.00 0.00 3.58
2237 2311 1.071471 CGTCCTTTGCTGTGAGGGT 59.929 57.895 0.00 0.00 33.73 4.34
2256 2330 4.645921 GCGCACCTTGGTGCCAAC 62.646 66.667 31.37 20.47 46.77 3.77
2257 2331 3.215568 CGCACCTTGGTGCCAACA 61.216 61.111 31.37 0.00 46.77 3.33
2290 2364 7.838272 CAGAAATCTGCTGTCCTGGATGGAA 62.838 48.000 0.00 0.00 41.01 3.53
2322 2396 2.216148 GCCTCACCTATGGCTCTGT 58.784 57.895 0.00 0.00 45.26 3.41
2326 2400 2.968574 CCTCACCTATGGCTCTGTACAT 59.031 50.000 0.00 0.00 0.00 2.29
2342 2416 2.283388 ATGCACAGCTTGGGGTGG 60.283 61.111 4.30 0.00 44.34 4.61
2343 2417 3.150903 ATGCACAGCTTGGGGTGGT 62.151 57.895 4.30 0.00 44.34 4.16
2344 2418 3.297620 GCACAGCTTGGGGTGGTG 61.298 66.667 4.30 0.00 44.34 4.17
2345 2419 2.195683 CACAGCTTGGGGTGGTGT 59.804 61.111 0.00 0.00 45.43 4.16
2346 2420 1.898574 CACAGCTTGGGGTGGTGTC 60.899 63.158 0.00 0.00 43.14 3.67
2347 2421 2.078665 ACAGCTTGGGGTGGTGTCT 61.079 57.895 0.00 0.00 41.52 3.41
2348 2422 0.766674 ACAGCTTGGGGTGGTGTCTA 60.767 55.000 0.00 0.00 41.52 2.59
2349 2423 0.400213 CAGCTTGGGGTGGTGTCTAA 59.600 55.000 0.00 0.00 37.31 2.10
2350 2424 1.145571 AGCTTGGGGTGGTGTCTAAA 58.854 50.000 0.00 0.00 0.00 1.85
2351 2425 1.710809 AGCTTGGGGTGGTGTCTAAAT 59.289 47.619 0.00 0.00 0.00 1.40
2352 2426 2.110011 AGCTTGGGGTGGTGTCTAAATT 59.890 45.455 0.00 0.00 0.00 1.82
2353 2427 3.332485 AGCTTGGGGTGGTGTCTAAATTA 59.668 43.478 0.00 0.00 0.00 1.40
2431 2505 6.072230 TGCTATAGTATCATCTCTCTGTGCAC 60.072 42.308 10.75 10.75 0.00 4.57
2464 2538 8.443953 AGAAATCTACCTGAATTTGAGTATGC 57.556 34.615 0.00 0.00 0.00 3.14
2480 2557 6.149504 GAGTATGCGACTCGTTTTAAGTTT 57.850 37.500 3.08 0.00 45.16 2.66
2481 2558 5.912528 AGTATGCGACTCGTTTTAAGTTTG 58.087 37.500 0.00 0.00 29.95 2.93
2483 2560 4.603231 TGCGACTCGTTTTAAGTTTGTT 57.397 36.364 0.00 0.00 0.00 2.83
2485 2562 5.392286 TGCGACTCGTTTTAAGTTTGTTTT 58.608 33.333 0.00 0.00 0.00 2.43
2486 2563 5.508922 TGCGACTCGTTTTAAGTTTGTTTTC 59.491 36.000 0.00 0.00 0.00 2.29
2487 2564 5.052829 GCGACTCGTTTTAAGTTTGTTTTCC 60.053 40.000 0.00 0.00 0.00 3.13
2488 2565 5.168329 CGACTCGTTTTAAGTTTGTTTTCCG 59.832 40.000 0.00 0.00 0.00 4.30
2506 2583 5.381174 TTCCGATTCGTTCAGTTCTCTTA 57.619 39.130 5.20 0.00 0.00 2.10
2516 2593 8.107399 TCGTTCAGTTCTCTTACATTCTCTAA 57.893 34.615 0.00 0.00 0.00 2.10
2529 2606 9.722056 CTTACATTCTCTAATGGTATTTGCAAC 57.278 33.333 0.00 0.00 45.72 4.17
2566 2643 3.750130 ACTCACTGCATGAATTCTCACAC 59.250 43.478 7.05 0.00 36.69 3.82
2610 2687 7.027161 GGTGCTGTAACCAGTGTAAATAATTG 58.973 38.462 0.00 0.00 41.02 2.32
2653 2861 6.795098 TTTATGTGTTCAGTTATTCGTGCT 57.205 33.333 0.00 0.00 0.00 4.40
2701 2909 9.273016 CATTGTCTAACTCTTCTTTAACCTTCA 57.727 33.333 0.00 0.00 0.00 3.02
2708 2916 8.990163 AACTCTTCTTTAACCTTCAATTACCA 57.010 30.769 0.00 0.00 0.00 3.25
2878 3089 8.634444 CATTATGGTTTAGAGACTACAGTAGCT 58.366 37.037 7.57 5.93 0.00 3.32
2885 3096 4.394729 AGAGACTACAGTAGCTGATAGCC 58.605 47.826 7.57 0.00 43.77 3.93
2890 3101 6.270463 AGACTACAGTAGCTGATAGCCTAGTA 59.730 42.308 7.57 0.00 43.77 1.82
2917 3128 5.130311 TGGTTCTAATAGCAGGATAGTTGCA 59.870 40.000 0.00 0.00 43.92 4.08
3127 3338 7.039011 AGGATAGATGATTACAATAAGGCACGA 60.039 37.037 0.00 0.00 0.00 4.35
3193 3404 4.301628 CAAGTGATTTTGGAGCTTTGTCC 58.698 43.478 0.00 0.00 37.10 4.02
3301 3512 7.009265 GCTGTTTTTAAGGACACTGAAAAAGAC 59.991 37.037 3.58 0.00 44.07 3.01
3313 3524 4.039973 ACTGAAAAAGACCGTAGTGATCCA 59.960 41.667 0.00 0.00 0.00 3.41
3437 3658 0.768609 GCAGGTATCTTAGGCCCCCT 60.769 60.000 0.00 0.00 37.71 4.79
3599 3820 2.626840 GGATCTTCTGGAACTGCTGTC 58.373 52.381 0.00 0.00 0.00 3.51
3602 3823 4.100808 GGATCTTCTGGAACTGCTGTCTAT 59.899 45.833 0.00 0.00 0.00 1.98
3650 3871 2.143876 ACCCCCATTGCTATGACAAC 57.856 50.000 9.87 0.00 33.37 3.32
3724 3945 8.749499 GCTTGCATATCATTTGTTTCAGTATTC 58.251 33.333 0.00 0.00 0.00 1.75
3772 3993 7.255569 TGTCTAAGTACGTGTTCTAATCATGG 58.744 38.462 0.00 0.00 0.00 3.66
3781 4002 4.508124 GTGTTCTAATCATGGAAGGTAGCG 59.492 45.833 0.00 0.00 0.00 4.26
3785 4006 6.911250 TCTAATCATGGAAGGTAGCGAATA 57.089 37.500 0.00 0.00 0.00 1.75
3794 4015 6.588204 TGGAAGGTAGCGAATATTGTTATGT 58.412 36.000 0.00 0.00 0.00 2.29
3795 4016 7.051623 TGGAAGGTAGCGAATATTGTTATGTT 58.948 34.615 0.00 0.00 0.00 2.71
3829 4051 9.494271 AAGTAGTAACCAATATATCACATGCTG 57.506 33.333 0.00 0.00 0.00 4.41
3861 4083 7.606456 CCTTTACAGAACTTGGCTTAATCTGTA 59.394 37.037 15.01 15.01 46.43 2.74
3870 4092 4.960938 TGGCTTAATCTGTATGGTAGCAG 58.039 43.478 0.00 0.00 0.00 4.24
3879 4101 8.438676 AATCTGTATGGTAGCAGTTTGTTATC 57.561 34.615 0.00 0.00 34.57 1.75
3882 4104 7.343574 TCTGTATGGTAGCAGTTTGTTATCCTA 59.656 37.037 0.00 0.00 34.57 2.94
3896 4118 5.448654 TGTTATCCTAATTGCATCCAAGCT 58.551 37.500 0.00 0.00 33.80 3.74
3907 4129 0.685458 ATCCAAGCTGGGTGGCAATC 60.685 55.000 7.13 0.00 38.32 2.67
3908 4130 2.353610 CCAAGCTGGGTGGCAATCC 61.354 63.158 0.00 0.00 32.67 3.01
3909 4131 2.037847 AAGCTGGGTGGCAATCCC 59.962 61.111 6.23 6.23 44.81 3.85
3910 4132 2.551413 AAGCTGGGTGGCAATCCCT 61.551 57.895 13.79 0.00 44.84 4.20
3911 4133 2.440980 GCTGGGTGGCAATCCCTC 60.441 66.667 13.79 3.15 44.84 4.30
3912 4134 2.276740 CTGGGTGGCAATCCCTCC 59.723 66.667 13.79 0.00 44.84 4.30
3913 4135 3.704231 CTGGGTGGCAATCCCTCCG 62.704 68.421 13.79 0.21 46.27 4.63
3914 4136 3.728373 GGGTGGCAATCCCTCCGT 61.728 66.667 5.94 0.00 46.27 4.69
3916 4138 1.705997 GGGTGGCAATCCCTCCGTAT 61.706 60.000 5.94 0.00 46.27 3.06
3917 4139 0.250338 GGTGGCAATCCCTCCGTATC 60.250 60.000 0.00 0.00 37.50 2.24
3918 4140 0.468226 GTGGCAATCCCTCCGTATCA 59.532 55.000 0.00 0.00 0.00 2.15
3919 4141 1.134220 GTGGCAATCCCTCCGTATCAA 60.134 52.381 0.00 0.00 0.00 2.57
3920 4142 1.562008 TGGCAATCCCTCCGTATCAAA 59.438 47.619 0.00 0.00 0.00 2.69
3921 4143 2.025793 TGGCAATCCCTCCGTATCAAAA 60.026 45.455 0.00 0.00 0.00 2.44
3922 4144 3.222603 GGCAATCCCTCCGTATCAAAAT 58.777 45.455 0.00 0.00 0.00 1.82
3923 4145 4.141367 TGGCAATCCCTCCGTATCAAAATA 60.141 41.667 0.00 0.00 0.00 1.40
3924 4146 5.010282 GGCAATCCCTCCGTATCAAAATAT 58.990 41.667 0.00 0.00 0.00 1.28
3925 4147 6.177610 GGCAATCCCTCCGTATCAAAATATA 58.822 40.000 0.00 0.00 0.00 0.86
3926 4148 6.657541 GGCAATCCCTCCGTATCAAAATATAA 59.342 38.462 0.00 0.00 0.00 0.98
3927 4149 7.148239 GGCAATCCCTCCGTATCAAAATATAAG 60.148 40.741 0.00 0.00 0.00 1.73
3928 4150 7.606456 GCAATCCCTCCGTATCAAAATATAAGA 59.394 37.037 0.00 0.00 0.00 2.10
3929 4151 8.936864 CAATCCCTCCGTATCAAAATATAAGAC 58.063 37.037 0.00 0.00 0.00 3.01
3930 4152 6.684686 TCCCTCCGTATCAAAATATAAGACG 58.315 40.000 0.00 0.00 0.00 4.18
3931 4153 6.266103 TCCCTCCGTATCAAAATATAAGACGT 59.734 38.462 0.00 0.00 0.00 4.34
3932 4154 6.927381 CCCTCCGTATCAAAATATAAGACGTT 59.073 38.462 0.00 0.00 0.00 3.99
3933 4155 7.440255 CCCTCCGTATCAAAATATAAGACGTTT 59.560 37.037 0.00 0.00 0.00 3.60
3934 4156 8.823818 CCTCCGTATCAAAATATAAGACGTTTT 58.176 33.333 0.00 0.00 0.00 2.43
3936 4158 9.976255 TCCGTATCAAAATATAAGACGTTTTTG 57.024 29.630 12.50 12.50 39.33 2.44
3937 4159 9.763465 CCGTATCAAAATATAAGACGTTTTTGT 57.237 29.630 16.32 9.41 39.13 2.83
3941 4163 9.783256 ATCAAAATATAAGACGTTTTTGTAGGC 57.217 29.630 16.32 0.00 39.13 3.93
3942 4164 9.005777 TCAAAATATAAGACGTTTTTGTAGGCT 57.994 29.630 16.32 0.00 39.13 4.58
3945 4167 9.662947 AAATATAAGACGTTTTTGTAGGCTAGT 57.337 29.630 0.00 0.00 0.00 2.57
3946 4168 9.662947 AATATAAGACGTTTTTGTAGGCTAGTT 57.337 29.630 0.00 0.00 0.00 2.24
3947 4169 7.974482 ATAAGACGTTTTTGTAGGCTAGTTT 57.026 32.000 0.00 0.00 0.00 2.66
3949 4171 7.417496 AAGACGTTTTTGTAGGCTAGTTTAG 57.583 36.000 0.00 0.00 0.00 1.85
3950 4172 6.752168 AGACGTTTTTGTAGGCTAGTTTAGA 58.248 36.000 0.00 0.00 0.00 2.10
3951 4173 6.644181 AGACGTTTTTGTAGGCTAGTTTAGAC 59.356 38.462 0.00 0.00 0.00 2.59
3953 4175 7.661040 ACGTTTTTGTAGGCTAGTTTAGACTA 58.339 34.615 0.00 0.00 44.01 2.59
3962 4184 6.519382 AGGCTAGTTTAGACTACAAAAACGT 58.481 36.000 0.00 0.00 44.01 3.99
3963 4185 6.644181 AGGCTAGTTTAGACTACAAAAACGTC 59.356 38.462 0.00 0.00 44.01 4.34
3964 4186 6.644181 GGCTAGTTTAGACTACAAAAACGTCT 59.356 38.462 0.00 0.00 40.74 4.18
3965 4187 7.809806 GGCTAGTTTAGACTACAAAAACGTCTA 59.190 37.037 0.00 0.00 38.77 2.59
3966 4188 9.351570 GCTAGTTTAGACTACAAAAACGTCTAT 57.648 33.333 0.00 0.00 39.29 1.98
3974 4196 9.498176 AGACTACAAAAACGTCTATATTTTGGT 57.502 29.630 20.54 12.71 44.37 3.67
3982 4204 9.609346 AAAACGTCTATATTTTGGTACATAGCT 57.391 29.630 0.00 0.00 39.30 3.32
3984 4206 9.909644 AACGTCTATATTTTGGTACATAGCTAG 57.090 33.333 0.00 0.00 39.30 3.42
3985 4207 9.075678 ACGTCTATATTTTGGTACATAGCTAGT 57.924 33.333 0.00 0.40 39.30 2.57
3996 4218 7.769220 TGGTACATAGCTAGTAAAAGTGAGTC 58.231 38.462 0.00 0.00 0.00 3.36
4036 4258 4.611367 AGATAGTACTGGTAGTGGCAGTT 58.389 43.478 5.39 0.00 0.00 3.16
4049 4271 4.822026 AGTGGCAGTTGTAGTTATGAGTC 58.178 43.478 0.00 0.00 0.00 3.36
4062 4284 0.970937 ATGAGTCATGACCCCGTCGT 60.971 55.000 22.21 11.49 34.95 4.34
4082 4305 4.161565 TCGTGAACAAGGGTAGCTTGATAT 59.838 41.667 0.00 0.00 35.88 1.63
4096 4320 4.853268 GCTTGATATAGCTTTGCCTTGAC 58.147 43.478 0.00 0.00 38.15 3.18
4111 4335 2.224314 CCTTGACGCTTGAAAGGTTCTC 59.776 50.000 0.00 0.00 36.50 2.87
4126 4350 6.566197 AAGGTTCTCAAGCAATCTGTTAAG 57.434 37.500 0.00 0.00 0.00 1.85
4166 4390 2.161855 TGGTATCTTGTTTGCTGCTGG 58.838 47.619 0.00 0.00 0.00 4.85
4202 4426 7.461749 TCTCTCTTTTGTTCCCTCACAATAAT 58.538 34.615 0.00 0.00 36.54 1.28
4216 4441 9.593134 CCCTCACAATAATATGCTCTATTCTAC 57.407 37.037 0.00 0.00 0.00 2.59
4220 4445 9.593134 CACAATAATATGCTCTATTCTACTCCC 57.407 37.037 0.00 0.00 0.00 4.30
4224 4449 7.716799 AATATGCTCTATTCTACTCCCTCTG 57.283 40.000 0.00 0.00 0.00 3.35
4226 4451 5.648330 TGCTCTATTCTACTCCCTCTGTA 57.352 43.478 0.00 0.00 0.00 2.74
4228 4453 6.432581 TGCTCTATTCTACTCCCTCTGTAAA 58.567 40.000 0.00 0.00 0.00 2.01
4229 4454 6.321690 TGCTCTATTCTACTCCCTCTGTAAAC 59.678 42.308 0.00 0.00 0.00 2.01
4230 4455 6.548251 GCTCTATTCTACTCCCTCTGTAAACT 59.452 42.308 0.00 0.00 0.00 2.66
4232 4457 8.977267 TCTATTCTACTCCCTCTGTAAACTAC 57.023 38.462 0.00 0.00 0.00 2.73
4234 4459 7.885009 ATTCTACTCCCTCTGTAAACTACTC 57.115 40.000 0.00 0.00 0.00 2.59
4235 4460 5.753716 TCTACTCCCTCTGTAAACTACTCC 58.246 45.833 0.00 0.00 0.00 3.85
4236 4461 3.710724 ACTCCCTCTGTAAACTACTCCC 58.289 50.000 0.00 0.00 0.00 4.30
4237 4462 3.337301 ACTCCCTCTGTAAACTACTCCCT 59.663 47.826 0.00 0.00 0.00 4.20
4238 4463 3.955551 CTCCCTCTGTAAACTACTCCCTC 59.044 52.174 0.00 0.00 0.00 4.30
4239 4464 3.032459 CCCTCTGTAAACTACTCCCTCC 58.968 54.545 0.00 0.00 0.00 4.30
4240 4465 2.688958 CCTCTGTAAACTACTCCCTCCG 59.311 54.545 0.00 0.00 0.00 4.63
4241 4466 3.354467 CTCTGTAAACTACTCCCTCCGT 58.646 50.000 0.00 0.00 0.00 4.69
4242 4467 3.350833 TCTGTAAACTACTCCCTCCGTC 58.649 50.000 0.00 0.00 0.00 4.79
4243 4468 2.426381 CTGTAAACTACTCCCTCCGTCC 59.574 54.545 0.00 0.00 0.00 4.79
4244 4469 1.753649 GTAAACTACTCCCTCCGTCCC 59.246 57.143 0.00 0.00 0.00 4.46
4245 4470 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
4246 4471 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
4247 4472 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4248 4473 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
4249 4474 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4250 4475 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4251 4476 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4252 4477 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4253 4478 1.280998 TCCCTCCGTCCCAAAATTCTC 59.719 52.381 0.00 0.00 0.00 2.87
4254 4479 1.369625 CCTCCGTCCCAAAATTCTCG 58.630 55.000 0.00 0.00 0.00 4.04
4255 4480 1.338769 CCTCCGTCCCAAAATTCTCGT 60.339 52.381 0.00 0.00 0.00 4.18
4256 4481 2.000447 CTCCGTCCCAAAATTCTCGTC 59.000 52.381 0.00 0.00 0.00 4.20
4257 4482 1.621814 TCCGTCCCAAAATTCTCGTCT 59.378 47.619 0.00 0.00 0.00 4.18
4258 4483 2.038033 TCCGTCCCAAAATTCTCGTCTT 59.962 45.455 0.00 0.00 0.00 3.01
4259 4484 2.415512 CCGTCCCAAAATTCTCGTCTTC 59.584 50.000 0.00 0.00 0.00 2.87
4260 4485 2.092211 CGTCCCAAAATTCTCGTCTTCG 59.908 50.000 0.00 0.00 38.55 3.79
4261 4486 3.323243 GTCCCAAAATTCTCGTCTTCGA 58.677 45.455 0.00 0.00 44.12 3.71
4262 4487 3.933332 GTCCCAAAATTCTCGTCTTCGAT 59.067 43.478 0.00 0.00 45.21 3.59
4263 4488 4.392138 GTCCCAAAATTCTCGTCTTCGATT 59.608 41.667 0.00 0.00 45.21 3.34
4264 4489 5.001232 TCCCAAAATTCTCGTCTTCGATTT 58.999 37.500 0.00 0.00 45.21 2.17
4265 4490 5.088739 CCCAAAATTCTCGTCTTCGATTTG 58.911 41.667 0.00 7.16 45.21 2.32
4266 4491 5.334879 CCCAAAATTCTCGTCTTCGATTTGT 60.335 40.000 10.93 0.00 45.21 2.83
4267 4492 5.790495 CCAAAATTCTCGTCTTCGATTTGTC 59.210 40.000 10.93 0.00 45.21 3.18
4268 4493 6.347725 CCAAAATTCTCGTCTTCGATTTGTCT 60.348 38.462 10.93 0.00 45.21 3.41
4269 4494 7.148639 CCAAAATTCTCGTCTTCGATTTGTCTA 60.149 37.037 10.93 0.00 45.21 2.59
4270 4495 7.513190 AAATTCTCGTCTTCGATTTGTCTAG 57.487 36.000 0.00 0.00 45.21 2.43
4271 4496 5.874895 TTCTCGTCTTCGATTTGTCTAGA 57.125 39.130 0.00 0.00 45.21 2.43
4272 4497 6.438259 TTCTCGTCTTCGATTTGTCTAGAT 57.562 37.500 0.00 0.00 45.21 1.98
4273 4498 7.549615 TTCTCGTCTTCGATTTGTCTAGATA 57.450 36.000 0.00 0.00 45.21 1.98
4274 4499 6.946165 TCTCGTCTTCGATTTGTCTAGATAC 58.054 40.000 0.00 0.00 45.21 2.24
4275 4500 5.735324 TCGTCTTCGATTTGTCTAGATACG 58.265 41.667 0.00 0.00 41.35 3.06
4276 4501 4.904724 CGTCTTCGATTTGTCTAGATACGG 59.095 45.833 0.00 0.00 39.71 4.02
4277 4502 5.277202 CGTCTTCGATTTGTCTAGATACGGA 60.277 44.000 0.00 0.00 39.71 4.69
4278 4503 6.566187 CGTCTTCGATTTGTCTAGATACGGAT 60.566 42.308 0.00 0.00 39.71 4.18
4279 4504 6.579292 GTCTTCGATTTGTCTAGATACGGATG 59.421 42.308 0.00 0.00 0.00 3.51
4280 4505 6.262496 TCTTCGATTTGTCTAGATACGGATGT 59.738 38.462 0.00 0.00 0.00 3.06
4281 4506 7.443272 TCTTCGATTTGTCTAGATACGGATGTA 59.557 37.037 0.00 0.00 34.45 2.29
4282 4507 7.683437 TCGATTTGTCTAGATACGGATGTAT 57.317 36.000 0.00 0.00 43.97 2.29
4298 4523 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
4299 4524 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
4300 4525 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
4301 4526 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
4311 4536 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
4312 4537 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
4313 4538 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
4314 4539 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
4315 4540 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
4316 4541 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
4317 4542 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
4318 4543 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
4319 4544 7.259882 ACGTGACTTGATACATCCGTATTTAA 58.740 34.615 0.00 0.00 38.48 1.52
4320 4545 7.760794 ACGTGACTTGATACATCCGTATTTAAA 59.239 33.333 0.00 0.00 38.48 1.52
4321 4546 8.054236 CGTGACTTGATACATCCGTATTTAAAC 58.946 37.037 0.00 0.00 38.48 2.01
4322 4547 8.875803 GTGACTTGATACATCCGTATTTAAACA 58.124 33.333 0.00 0.00 38.48 2.83
4323 4548 9.438228 TGACTTGATACATCCGTATTTAAACAA 57.562 29.630 0.00 0.00 38.48 2.83
4344 4569 9.546428 AAACAAATCTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.04 4.12
4345 4570 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4346 4571 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
4347 4572 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4348 4573 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4349 4574 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4350 4575 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4351 4576 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4352 4577 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4353 4578 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
4354 4579 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4355 4580 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
4356 4581 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4357 4582 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24
4358 4583 1.961133 TTTGGGACGGAGGGAGTAAT 58.039 50.000 0.00 0.00 0.00 1.89
4359 4584 2.852714 TTGGGACGGAGGGAGTAATA 57.147 50.000 0.00 0.00 0.00 0.98
4360 4585 3.339713 TTGGGACGGAGGGAGTAATAT 57.660 47.619 0.00 0.00 0.00 1.28
4361 4586 4.474303 TTGGGACGGAGGGAGTAATATA 57.526 45.455 0.00 0.00 0.00 0.86
4362 4587 4.474303 TGGGACGGAGGGAGTAATATAA 57.526 45.455 0.00 0.00 0.00 0.98
4363 4588 4.413760 TGGGACGGAGGGAGTAATATAAG 58.586 47.826 0.00 0.00 0.00 1.73
4364 4589 4.106825 TGGGACGGAGGGAGTAATATAAGA 59.893 45.833 0.00 0.00 0.00 2.10
4365 4590 4.705991 GGGACGGAGGGAGTAATATAAGAG 59.294 50.000 0.00 0.00 0.00 2.85
4366 4591 4.158209 GGACGGAGGGAGTAATATAAGAGC 59.842 50.000 0.00 0.00 0.00 4.09
4367 4592 3.757493 ACGGAGGGAGTAATATAAGAGCG 59.243 47.826 0.00 0.00 0.00 5.03
4368 4593 3.757493 CGGAGGGAGTAATATAAGAGCGT 59.243 47.826 0.00 0.00 0.00 5.07
4369 4594 4.217983 CGGAGGGAGTAATATAAGAGCGTT 59.782 45.833 0.00 0.00 0.00 4.84
4370 4595 5.278858 CGGAGGGAGTAATATAAGAGCGTTT 60.279 44.000 0.00 0.00 0.00 3.60
4371 4596 6.072286 CGGAGGGAGTAATATAAGAGCGTTTA 60.072 42.308 0.00 0.00 0.00 2.01
4372 4597 7.314393 GGAGGGAGTAATATAAGAGCGTTTAG 58.686 42.308 0.00 0.00 0.00 1.85
4373 4598 7.176340 GGAGGGAGTAATATAAGAGCGTTTAGA 59.824 40.741 0.00 0.00 0.00 2.10
4374 4599 8.653036 AGGGAGTAATATAAGAGCGTTTAGAT 57.347 34.615 0.00 0.00 0.00 1.98
4375 4600 8.741841 AGGGAGTAATATAAGAGCGTTTAGATC 58.258 37.037 0.00 0.00 35.01 2.75
4376 4601 8.521176 GGGAGTAATATAAGAGCGTTTAGATCA 58.479 37.037 0.00 0.00 37.82 2.92
4377 4602 9.344309 GGAGTAATATAAGAGCGTTTAGATCAC 57.656 37.037 0.00 0.00 37.82 3.06
4379 4604 9.900710 AGTAATATAAGAGCGTTTAGATCACTG 57.099 33.333 0.00 0.00 37.82 3.66
4380 4605 9.894783 GTAATATAAGAGCGTTTAGATCACTGA 57.105 33.333 0.00 0.00 37.82 3.41
4382 4607 9.469807 AATATAAGAGCGTTTAGATCACTGAAG 57.530 33.333 0.00 0.00 37.82 3.02
4383 4608 4.792521 AGAGCGTTTAGATCACTGAAGT 57.207 40.909 0.00 0.00 37.82 3.01
4384 4609 5.899120 AGAGCGTTTAGATCACTGAAGTA 57.101 39.130 0.00 0.00 37.82 2.24
4385 4610 5.885881 AGAGCGTTTAGATCACTGAAGTAG 58.114 41.667 0.00 0.00 37.82 2.57
4386 4611 5.416326 AGAGCGTTTAGATCACTGAAGTAGT 59.584 40.000 0.00 0.00 41.36 2.73
4399 4624 6.707599 ACTGAAGTAGTGATTTAAACGCTC 57.292 37.500 7.00 0.00 38.49 5.03
4400 4625 6.456501 ACTGAAGTAGTGATTTAAACGCTCT 58.543 36.000 7.00 4.27 38.49 4.09
4401 4626 6.929606 ACTGAAGTAGTGATTTAAACGCTCTT 59.070 34.615 7.00 9.51 38.49 2.85
4402 4627 8.086522 ACTGAAGTAGTGATTTAAACGCTCTTA 58.913 33.333 7.00 0.00 38.49 2.10
4403 4628 8.997621 TGAAGTAGTGATTTAAACGCTCTTAT 57.002 30.769 7.00 0.00 0.00 1.73
4417 4642 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
4418 4643 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
4419 4644 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
4420 4645 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
4421 4646 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
4422 4647 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
4423 4648 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
4434 4659 8.985805 GTTTACGGAGGGAGTATATAATGTTTG 58.014 37.037 0.00 0.00 0.00 2.93
4441 4666 8.848474 AGGGAGTATATAATGTTTGATTTCGG 57.152 34.615 0.00 0.00 0.00 4.30
4464 4689 5.124776 GGTATATTGCTTGCCACAACAGTTA 59.875 40.000 0.00 0.00 0.00 2.24
4493 4718 2.239681 TGGTCCTTTGGTTGTTTGGT 57.760 45.000 0.00 0.00 0.00 3.67
4495 4720 2.234908 TGGTCCTTTGGTTGTTTGGTTG 59.765 45.455 0.00 0.00 0.00 3.77
4510 4735 3.341857 TGGTTGGTTGAATTCGAAACG 57.658 42.857 0.00 0.00 0.00 3.60
4515 4740 5.106830 GGTTGGTTGAATTCGAAACGTATCT 60.107 40.000 0.00 0.00 0.00 1.98
4516 4741 5.524511 TGGTTGAATTCGAAACGTATCTG 57.475 39.130 0.00 0.00 0.00 2.90
4529 4754 2.162208 ACGTATCTGCCAAACAGCAATG 59.838 45.455 0.00 0.00 46.76 2.82
4530 4755 2.533266 GTATCTGCCAAACAGCAATGC 58.467 47.619 0.00 0.00 46.76 3.56
4545 4770 3.693085 AGCAATGCTGGTCTCATTTACTG 59.307 43.478 7.07 0.00 37.57 2.74
4546 4771 3.733077 GCAATGCTGGTCTCATTTACTGC 60.733 47.826 0.00 0.00 32.30 4.40
4562 4787 2.808244 ACTGCGTGAAATGTTTGTTGG 58.192 42.857 0.00 0.00 0.00 3.77
4567 4792 3.485743 GCGTGAAATGTTTGTTGGTTCTC 59.514 43.478 0.00 0.00 0.00 2.87
4568 4793 4.733523 GCGTGAAATGTTTGTTGGTTCTCT 60.734 41.667 0.00 0.00 0.00 3.10
4569 4794 5.504994 GCGTGAAATGTTTGTTGGTTCTCTA 60.505 40.000 0.00 0.00 0.00 2.43
4571 4796 6.413818 CGTGAAATGTTTGTTGGTTCTCTAAC 59.586 38.462 0.00 0.00 35.94 2.34
4572 4797 7.254852 GTGAAATGTTTGTTGGTTCTCTAACA 58.745 34.615 0.00 0.00 41.86 2.41
4604 4830 8.084073 ACACTCCAACTTTATTTTCATGTCATG 58.916 33.333 6.47 6.47 0.00 3.07
4605 4831 8.084073 CACTCCAACTTTATTTTCATGTCATGT 58.916 33.333 12.54 0.00 0.00 3.21
4607 4833 9.132521 CTCCAACTTTATTTTCATGTCATGTTC 57.867 33.333 12.54 0.00 0.00 3.18
4608 4834 8.859090 TCCAACTTTATTTTCATGTCATGTTCT 58.141 29.630 12.54 0.05 0.00 3.01
4609 4835 9.132521 CCAACTTTATTTTCATGTCATGTTCTC 57.867 33.333 12.54 0.00 0.00 2.87
4649 4890 0.251341 ACCAGTCCTTCAACCATGGC 60.251 55.000 13.04 0.00 0.00 4.40
4666 4909 2.320781 TGGCTAGGAGATGCTACTTCC 58.679 52.381 0.00 0.00 0.00 3.46
4682 4925 2.224867 ACTTCCTGGGATGTTGGAACAG 60.225 50.000 2.81 0.00 43.04 3.16
4687 4930 3.834231 CCTGGGATGTTGGAACAGAATTT 59.166 43.478 0.00 0.00 43.04 1.82
4688 4931 4.322198 CCTGGGATGTTGGAACAGAATTTG 60.322 45.833 0.00 0.00 43.04 2.32
4714 4957 1.343142 ACCTGCTATGTCGTGTTGTCA 59.657 47.619 0.00 0.00 0.00 3.58
4728 4971 3.247648 GTGTTGTCATGTTAAGTGCGTCT 59.752 43.478 0.00 0.00 0.00 4.18
4729 4972 4.446385 GTGTTGTCATGTTAAGTGCGTCTA 59.554 41.667 0.00 0.00 0.00 2.59
4730 4973 5.120208 GTGTTGTCATGTTAAGTGCGTCTAT 59.880 40.000 0.00 0.00 0.00 1.98
4731 4974 5.347635 TGTTGTCATGTTAAGTGCGTCTATC 59.652 40.000 0.00 0.00 0.00 2.08
4836 5082 0.107654 ATCTACAAACAGGGGCGCTC 60.108 55.000 7.64 1.18 0.00 5.03
4856 5102 4.149396 GCTCGTCTTTTGCTCGTTTACTTA 59.851 41.667 0.00 0.00 0.00 2.24
4866 5112 6.114221 TGCTCGTTTACTTATGTATTTGGC 57.886 37.500 0.00 0.00 0.00 4.52
4867 5113 5.065474 TGCTCGTTTACTTATGTATTTGGCC 59.935 40.000 0.00 0.00 0.00 5.36
4889 5137 5.038033 CCAAGCACTCTTACTCTATTCGAC 58.962 45.833 0.00 0.00 0.00 4.20
4894 5142 6.095580 AGCACTCTTACTCTATTCGACATTCA 59.904 38.462 0.00 0.00 0.00 2.57
4898 5146 8.687242 ACTCTTACTCTATTCGACATTCATGAA 58.313 33.333 11.26 11.26 0.00 2.57
4915 5163 1.425066 TGAAACATCACTCCCTGCCTT 59.575 47.619 0.00 0.00 0.00 4.35
4917 5165 0.610232 AACATCACTCCCTGCCTTGC 60.610 55.000 0.00 0.00 0.00 4.01
4925 5173 2.674380 CCTGCCTTGCACTGGTCC 60.674 66.667 6.77 0.00 33.79 4.46
4956 5204 1.463444 GTACAACAATCCACCGTGAGC 59.537 52.381 0.00 0.00 0.00 4.26
4957 5205 0.108585 ACAACAATCCACCGTGAGCT 59.891 50.000 0.00 0.00 0.00 4.09
4958 5206 0.518636 CAACAATCCACCGTGAGCTG 59.481 55.000 0.00 0.00 0.00 4.24
4959 5207 0.108585 AACAATCCACCGTGAGCTGT 59.891 50.000 0.00 0.00 0.00 4.40
4960 5208 0.320771 ACAATCCACCGTGAGCTGTC 60.321 55.000 0.00 0.00 0.00 3.51
4961 5209 1.021390 CAATCCACCGTGAGCTGTCC 61.021 60.000 0.00 0.00 0.00 4.02
4962 5210 1.480212 AATCCACCGTGAGCTGTCCA 61.480 55.000 0.00 0.00 0.00 4.02
4963 5211 1.267574 ATCCACCGTGAGCTGTCCAT 61.268 55.000 0.00 0.00 0.00 3.41
4964 5212 0.613572 TCCACCGTGAGCTGTCCATA 60.614 55.000 0.00 0.00 0.00 2.74
4965 5213 0.179100 CCACCGTGAGCTGTCCATAG 60.179 60.000 0.00 0.00 0.00 2.23
4966 5214 0.532573 CACCGTGAGCTGTCCATAGT 59.467 55.000 0.00 0.00 0.00 2.12
4967 5215 1.066858 CACCGTGAGCTGTCCATAGTT 60.067 52.381 0.00 0.00 0.00 2.24
4968 5216 1.066858 ACCGTGAGCTGTCCATAGTTG 60.067 52.381 0.00 0.00 0.00 3.16
4969 5217 1.645034 CGTGAGCTGTCCATAGTTGG 58.355 55.000 0.00 0.00 45.15 3.77
4970 5218 1.066858 CGTGAGCTGTCCATAGTTGGT 60.067 52.381 0.00 0.00 44.06 3.67
4971 5219 2.350522 GTGAGCTGTCCATAGTTGGTG 58.649 52.381 0.00 0.00 44.06 4.17
4972 5220 1.339055 TGAGCTGTCCATAGTTGGTGC 60.339 52.381 0.00 0.00 44.06 5.01
4973 5221 0.035056 AGCTGTCCATAGTTGGTGCC 60.035 55.000 0.00 0.00 44.06 5.01
4974 5222 0.322456 GCTGTCCATAGTTGGTGCCA 60.322 55.000 0.00 0.00 44.06 4.92
4975 5223 1.742761 CTGTCCATAGTTGGTGCCAG 58.257 55.000 0.00 0.00 44.06 4.85
4976 5224 1.003580 CTGTCCATAGTTGGTGCCAGT 59.996 52.381 0.00 0.00 44.06 4.00
4977 5225 1.271325 TGTCCATAGTTGGTGCCAGTG 60.271 52.381 0.00 0.00 44.06 3.66
4978 5226 0.327924 TCCATAGTTGGTGCCAGTGG 59.672 55.000 4.20 4.20 44.06 4.00
4979 5227 0.038166 CCATAGTTGGTGCCAGTGGT 59.962 55.000 11.74 0.00 38.30 4.16
4980 5228 1.167851 CATAGTTGGTGCCAGTGGTG 58.832 55.000 11.74 0.00 0.00 4.17
5000 5248 5.665812 TGGTGGACCTAGTATCTTAGCATTT 59.334 40.000 0.00 0.00 36.82 2.32
5016 5264 0.686224 ATTTGGGGTGCCACAATGTG 59.314 50.000 6.75 6.37 0.00 3.21
5024 5272 2.687425 GGTGCCACAATGTGCATACATA 59.313 45.455 8.05 0.00 46.54 2.29
5025 5273 3.243168 GGTGCCACAATGTGCATACATAG 60.243 47.826 8.05 0.00 46.54 2.23
5026 5274 2.950975 TGCCACAATGTGCATACATAGG 59.049 45.455 8.05 0.00 46.54 2.57
5027 5275 2.287788 GCCACAATGTGCATACATAGGC 60.288 50.000 8.05 12.44 46.54 3.93
5028 5276 2.950975 CCACAATGTGCATACATAGGCA 59.049 45.455 8.05 0.00 46.54 4.75
5029 5277 3.380954 CCACAATGTGCATACATAGGCAA 59.619 43.478 8.05 0.00 46.54 4.52
5030 5278 4.353737 CACAATGTGCATACATAGGCAAC 58.646 43.478 0.00 0.00 46.54 4.17
5031 5279 4.015764 ACAATGTGCATACATAGGCAACA 58.984 39.130 0.00 2.19 46.54 3.33
5032 5280 4.142403 ACAATGTGCATACATAGGCAACAC 60.142 41.667 0.00 0.00 46.54 3.32
5033 5281 3.064900 TGTGCATACATAGGCAACACA 57.935 42.857 0.00 0.00 45.07 3.72
5034 5282 3.416156 TGTGCATACATAGGCAACACAA 58.584 40.909 0.00 0.00 45.07 3.33
5035 5283 3.190327 TGTGCATACATAGGCAACACAAC 59.810 43.478 0.00 0.00 45.07 3.32
5036 5284 3.440173 GTGCATACATAGGCAACACAACT 59.560 43.478 0.00 0.00 45.07 3.16
5037 5285 4.078537 TGCATACATAGGCAACACAACTT 58.921 39.130 0.00 0.00 40.30 2.66
5038 5286 4.155826 TGCATACATAGGCAACACAACTTC 59.844 41.667 0.00 0.00 40.30 3.01
5039 5287 4.155826 GCATACATAGGCAACACAACTTCA 59.844 41.667 0.00 0.00 41.41 3.02
5040 5288 5.674569 GCATACATAGGCAACACAACTTCAG 60.675 44.000 0.00 0.00 41.41 3.02
5041 5289 3.820557 ACATAGGCAACACAACTTCAGT 58.179 40.909 0.00 0.00 41.41 3.41
5042 5290 3.565482 ACATAGGCAACACAACTTCAGTG 59.435 43.478 0.00 0.00 42.56 3.66
5043 5291 0.740737 AGGCAACACAACTTCAGTGC 59.259 50.000 0.00 0.00 40.59 4.40
5044 5292 0.455410 GGCAACACAACTTCAGTGCA 59.545 50.000 0.00 0.00 40.59 4.57
5045 5293 1.548986 GCAACACAACTTCAGTGCAC 58.451 50.000 9.40 9.40 40.59 4.57
5046 5294 1.798813 GCAACACAACTTCAGTGCACC 60.799 52.381 14.63 0.00 40.59 5.01
5047 5295 1.745087 CAACACAACTTCAGTGCACCT 59.255 47.619 14.63 0.00 40.59 4.00
5048 5296 1.382522 ACACAACTTCAGTGCACCTG 58.617 50.000 14.63 11.39 40.59 4.00
5049 5297 1.340017 ACACAACTTCAGTGCACCTGT 60.340 47.619 14.63 4.49 42.19 4.00
5050 5298 1.331756 CACAACTTCAGTGCACCTGTC 59.668 52.381 14.63 0.00 42.19 3.51
5051 5299 0.947244 CAACTTCAGTGCACCTGTCC 59.053 55.000 14.63 0.00 42.19 4.02
5052 5300 0.546122 AACTTCAGTGCACCTGTCCA 59.454 50.000 14.63 0.42 42.19 4.02
5057 5305 2.665165 TCAGTGCACCTGTCCAAAATT 58.335 42.857 14.63 0.00 42.19 1.82
5125 5374 4.761163 TTCCCACTGGAACCTCCA 57.239 55.556 0.00 0.00 45.88 3.86
5180 5429 2.495270 TGTGATGAGCTGGAGAGAGAAC 59.505 50.000 0.00 0.00 0.00 3.01
5186 5435 3.257873 TGAGCTGGAGAGAGAACAAAGAG 59.742 47.826 0.00 0.00 0.00 2.85
5194 5443 5.163652 GGAGAGAGAACAAAGAGAGAGTAGC 60.164 48.000 0.00 0.00 0.00 3.58
5225 5502 7.226720 TGGTAGCTTCTTAAGTCTGTTCTTTTG 59.773 37.037 1.63 0.00 0.00 2.44
5254 5531 2.432972 GCGGTCGGCGGTTCTTTA 60.433 61.111 7.21 0.00 0.00 1.85
5258 5535 0.794473 GGTCGGCGGTTCTTTAACTG 59.206 55.000 7.21 0.00 43.69 3.16
5259 5536 1.606224 GGTCGGCGGTTCTTTAACTGA 60.606 52.381 7.21 0.00 43.56 3.41
5260 5537 1.458445 GTCGGCGGTTCTTTAACTGAC 59.542 52.381 7.21 0.00 45.30 3.51
5296 5573 3.805422 TCGTACACATGACAACAAACTCC 59.195 43.478 0.00 0.00 0.00 3.85
5297 5574 3.558006 CGTACACATGACAACAAACTCCA 59.442 43.478 0.00 0.00 0.00 3.86
5298 5575 4.034626 CGTACACATGACAACAAACTCCAA 59.965 41.667 0.00 0.00 0.00 3.53
5299 5576 5.447954 CGTACACATGACAACAAACTCCAAA 60.448 40.000 0.00 0.00 0.00 3.28
5300 5577 4.743493 ACACATGACAACAAACTCCAAAC 58.257 39.130 0.00 0.00 0.00 2.93
5301 5578 4.462483 ACACATGACAACAAACTCCAAACT 59.538 37.500 0.00 0.00 0.00 2.66
5302 5579 5.036737 CACATGACAACAAACTCCAAACTC 58.963 41.667 0.00 0.00 0.00 3.01
5303 5580 4.949856 ACATGACAACAAACTCCAAACTCT 59.050 37.500 0.00 0.00 0.00 3.24
5304 5581 5.418840 ACATGACAACAAACTCCAAACTCTT 59.581 36.000 0.00 0.00 0.00 2.85
5305 5582 5.309323 TGACAACAAACTCCAAACTCTTG 57.691 39.130 0.00 0.00 0.00 3.02
5341 5618 0.956633 TGCTGCCTGCTCTTCAAAAG 59.043 50.000 0.00 0.00 43.37 2.27
5367 5644 3.007398 ACTTAGCTTGGAGAAGGACACAG 59.993 47.826 0.00 0.00 0.00 3.66
5389 5666 6.312672 ACAGTTACAATTGTCCAAAAGCAAAC 59.687 34.615 15.85 10.35 0.00 2.93
5405 5682 4.638304 AGCAAACTTACAACATCTACGGT 58.362 39.130 0.00 0.00 0.00 4.83
5409 5686 3.084039 ACTTACAACATCTACGGTCGGA 58.916 45.455 0.00 0.00 0.00 4.55
5430 5707 2.224209 ACGTCTCAAACCGGTCTCAAAT 60.224 45.455 8.04 0.00 0.00 2.32
5432 5709 3.139077 GTCTCAAACCGGTCTCAAATGT 58.861 45.455 8.04 0.00 0.00 2.71
5434 5711 3.071023 TCTCAAACCGGTCTCAAATGTCT 59.929 43.478 8.04 0.00 0.00 3.41
5463 5740 2.750350 CACCCCTCATATCCGGCC 59.250 66.667 0.00 0.00 0.00 6.13
5470 5747 0.035056 CTCATATCCGGCCCCATTCC 60.035 60.000 0.00 0.00 0.00 3.01
5471 5748 1.377202 CATATCCGGCCCCATTCCG 60.377 63.158 0.00 0.00 46.05 4.30
5476 5753 4.418328 CGGCCCCATTCCGGAACA 62.418 66.667 21.56 0.00 42.99 3.18
5520 5797 2.275703 CGTAACGTCGGACTGATGC 58.724 57.895 6.57 0.00 37.08 3.91
5522 5799 1.546834 GTAACGTCGGACTGATGCTC 58.453 55.000 6.57 0.00 37.08 4.26
5526 5803 2.362503 TCGGACTGATGCTCGGGT 60.363 61.111 0.00 0.00 0.00 5.28
5527 5804 2.105128 CGGACTGATGCTCGGGTC 59.895 66.667 0.00 0.00 0.00 4.46
5528 5805 2.418910 CGGACTGATGCTCGGGTCT 61.419 63.158 0.00 0.00 0.00 3.85
5529 5806 1.439644 GGACTGATGCTCGGGTCTC 59.560 63.158 0.00 0.00 0.00 3.36
5530 5807 1.323271 GGACTGATGCTCGGGTCTCA 61.323 60.000 0.00 0.00 0.00 3.27
5531 5808 0.749649 GACTGATGCTCGGGTCTCAT 59.250 55.000 0.00 0.00 0.00 2.90
5532 5809 1.957177 GACTGATGCTCGGGTCTCATA 59.043 52.381 0.00 0.00 0.00 2.15
5533 5810 1.683917 ACTGATGCTCGGGTCTCATAC 59.316 52.381 0.00 0.00 0.00 2.39
5534 5811 0.668535 TGATGCTCGGGTCTCATACG 59.331 55.000 0.00 0.00 0.00 3.06
5535 5812 0.952280 GATGCTCGGGTCTCATACGA 59.048 55.000 0.00 0.00 35.14 3.43
5536 5813 1.337071 GATGCTCGGGTCTCATACGAA 59.663 52.381 0.00 0.00 36.08 3.85
5537 5814 0.738975 TGCTCGGGTCTCATACGAAG 59.261 55.000 0.00 0.00 36.08 3.79
5539 5816 1.268640 GCTCGGGTCTCATACGAAGTC 60.269 57.143 0.00 0.00 43.93 3.01
5540 5817 1.003759 CTCGGGTCTCATACGAAGTCG 60.004 57.143 0.00 0.00 43.93 4.18
5541 5818 0.029035 CGGGTCTCATACGAAGTCGG 59.971 60.000 5.60 0.00 43.93 4.79
5542 5819 1.386533 GGGTCTCATACGAAGTCGGA 58.613 55.000 5.60 0.00 43.93 4.55
5543 5820 1.065251 GGGTCTCATACGAAGTCGGAC 59.935 57.143 5.60 0.00 43.93 4.79
5544 5821 2.015587 GGTCTCATACGAAGTCGGACT 58.984 52.381 4.45 4.45 43.93 3.85
5545 5822 2.223294 GGTCTCATACGAAGTCGGACTG 60.223 54.545 12.12 2.53 43.93 3.51
5546 5823 2.676839 GTCTCATACGAAGTCGGACTGA 59.323 50.000 12.12 3.47 43.93 3.41
5547 5824 3.312973 GTCTCATACGAAGTCGGACTGAT 59.687 47.826 12.12 2.99 43.93 2.90
5548 5825 3.312697 TCTCATACGAAGTCGGACTGATG 59.687 47.826 12.12 12.50 43.93 3.07
5549 5826 2.120232 CATACGAAGTCGGACTGATGC 58.880 52.381 12.12 1.33 43.93 3.91
5550 5827 1.460504 TACGAAGTCGGACTGATGCT 58.539 50.000 12.12 0.00 43.93 3.79
5551 5828 0.171455 ACGAAGTCGGACTGATGCTC 59.829 55.000 12.12 4.10 44.95 4.26
5582 5859 1.743394 GAAATCGCTCGGAAACCCAAT 59.257 47.619 0.00 0.00 0.00 3.16
5594 5879 0.255890 AACCCAATGACCCGATGAGG 59.744 55.000 0.00 0.00 40.63 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 8.894409 ACAATATTATCAAACATTGTCACGTG 57.106 30.769 9.94 9.94 37.07 4.49
163 165 8.727100 AGGTATCATCCAGATTACAAGATACA 57.273 34.615 0.00 0.00 38.55 2.29
178 180 5.283457 ACTAACTCAGCAAGGTATCATCC 57.717 43.478 0.00 0.00 0.00 3.51
191 193 8.979574 AGAATCAAAGACGTTTAACTAACTCAG 58.020 33.333 0.00 0.00 34.46 3.35
280 282 5.008613 TGCCATCTTGAGTTTCAAAGTACAC 59.991 40.000 0.00 0.00 35.73 2.90
299 301 6.258354 ACATCCATATACCAATGATTGCCAT 58.742 36.000 0.00 0.00 36.99 4.40
326 328 8.087750 TCATTTTGTGCTAGATTTTTAAGGTGG 58.912 33.333 0.00 0.00 0.00 4.61
341 343 3.994392 ACGACGAGTATTCATTTTGTGCT 59.006 39.130 0.00 0.00 0.00 4.40
342 344 4.143200 TGACGACGAGTATTCATTTTGTGC 60.143 41.667 0.00 0.00 0.00 4.57
414 417 8.911247 AATTTGTAAACCGATAAAAGAGATGC 57.089 30.769 0.00 0.00 0.00 3.91
426 429 5.708230 AGACTGCCATAAATTTGTAAACCGA 59.292 36.000 0.00 0.00 0.00 4.69
444 447 2.949644 ACCCTACAAACAAACAGACTGC 59.050 45.455 1.25 0.00 0.00 4.40
445 448 4.202010 CCAACCCTACAAACAAACAGACTG 60.202 45.833 0.00 0.00 0.00 3.51
452 457 4.100189 CCACAATCCAACCCTACAAACAAA 59.900 41.667 0.00 0.00 0.00 2.83
470 475 4.866508 AGTAGAAACTCGATGTCCACAA 57.133 40.909 0.00 0.00 0.00 3.33
516 533 7.452880 TGTGTTCAGATTTTTAAGAGGATGG 57.547 36.000 0.00 0.00 0.00 3.51
623 663 1.524355 GTCACGATTCATGATGAGCCG 59.476 52.381 14.05 14.05 32.22 5.52
626 666 4.084693 CGGATTGTCACGATTCATGATGAG 60.085 45.833 0.00 0.00 0.00 2.90
628 668 3.557185 ACGGATTGTCACGATTCATGATG 59.443 43.478 0.00 0.00 0.00 3.07
629 669 3.797039 ACGGATTGTCACGATTCATGAT 58.203 40.909 0.00 0.00 0.00 2.45
655 695 0.326927 GCCCAGCCCTACAAAGTACA 59.673 55.000 0.00 0.00 0.00 2.90
659 699 2.438434 CCGCCCAGCCCTACAAAG 60.438 66.667 0.00 0.00 0.00 2.77
660 700 4.733542 GCCGCCCAGCCCTACAAA 62.734 66.667 0.00 0.00 0.00 2.83
717 757 0.613777 GGATTGTGGTCGAGGAAGGT 59.386 55.000 0.00 0.00 0.00 3.50
718 758 0.460284 CGGATTGTGGTCGAGGAAGG 60.460 60.000 0.00 0.00 0.00 3.46
905 949 3.400928 CTGCCTGCCTGCCTCTCT 61.401 66.667 0.00 0.00 0.00 3.10
1195 1244 0.250234 CAGAGACAGGGAATTGCGGA 59.750 55.000 0.00 0.00 0.00 5.54
1208 1257 1.225422 CGACGACGACGACAGAGAC 60.225 63.158 15.32 0.00 42.66 3.36
1246 1298 3.802507 CGCGAATTAAAGGCGGGA 58.197 55.556 0.00 0.00 45.69 5.14
1291 1343 3.792047 CGCACCGCACATCCACAG 61.792 66.667 0.00 0.00 0.00 3.66
1334 1386 1.405661 CCAGGAAACGAAGCCCTAGAC 60.406 57.143 0.00 0.00 0.00 2.59
1377 1429 3.519510 AGAAGAATCGAGTCCCCAATTCA 59.480 43.478 9.63 0.00 31.90 2.57
1410 1462 4.578516 CCACATCCTCTATATCCGAGCTAG 59.421 50.000 0.00 0.00 0.00 3.42
1432 1484 3.181500 GCCCGAATTACAGAACATCAACC 60.181 47.826 0.00 0.00 0.00 3.77
1437 1489 2.684001 TCGCCCGAATTACAGAACAT 57.316 45.000 0.00 0.00 0.00 2.71
1556 1608 3.218453 TCTAGCTCATGGAGAGTACAGC 58.782 50.000 0.00 0.00 46.47 4.40
1557 1609 4.713553 TCTCTAGCTCATGGAGAGTACAG 58.286 47.826 9.70 0.00 46.47 2.74
1570 1622 4.023622 TGCATCAGTATCGTTCTCTAGCTC 60.024 45.833 0.00 0.00 0.00 4.09
1582 1634 6.261826 AGAAAACTAATGCCTGCATCAGTATC 59.738 38.462 8.30 9.80 34.05 2.24
1588 1640 4.201990 CCAGAGAAAACTAATGCCTGCATC 60.202 45.833 4.89 0.00 35.31 3.91
1589 1641 3.698040 CCAGAGAAAACTAATGCCTGCAT 59.302 43.478 0.00 0.00 38.46 3.96
1598 1650 8.160765 TGACCAATATCAACCAGAGAAAACTAA 58.839 33.333 0.00 0.00 0.00 2.24
1605 1657 5.762179 ACTTGACCAATATCAACCAGAGA 57.238 39.130 0.00 0.00 34.84 3.10
1689 1741 2.187946 CAGGCACGGGACATCTCC 59.812 66.667 0.00 0.00 35.50 3.71
1740 1793 7.255451 CCATTTAGGTAGAGAAAAGTGCAAACA 60.255 37.037 0.00 0.00 0.00 2.83
1787 1840 5.572896 CCACTTGCGGAATTGAGAATAAAAC 59.427 40.000 8.60 0.00 0.00 2.43
1804 1859 1.539827 ACCGAAATAACAGCCACTTGC 59.460 47.619 0.00 0.00 41.71 4.01
1825 1880 5.741011 GGTCCAAACCATGAGTCTATAACA 58.259 41.667 0.00 0.00 45.68 2.41
1883 1939 2.412870 TCATTGTCAGTGCACCTAACG 58.587 47.619 14.63 0.00 0.00 3.18
1892 1948 4.700700 TGGCTATCTCATCATTGTCAGTG 58.299 43.478 0.00 0.00 0.00 3.66
1895 1951 7.094506 GCAATAATGGCTATCTCATCATTGTCA 60.095 37.037 0.00 0.00 34.40 3.58
1900 1956 6.718294 TGAGCAATAATGGCTATCTCATCAT 58.282 36.000 0.00 0.00 42.78 2.45
1922 1978 3.194755 TCCTAATTACAGCAGCGACTTGA 59.805 43.478 0.00 0.00 0.00 3.02
1962 2018 2.622064 AAGATCACTATTCACCGCCC 57.378 50.000 0.00 0.00 0.00 6.13
1965 2021 8.648557 TTTCAGATTAAGATCACTATTCACCG 57.351 34.615 0.00 0.00 34.60 4.94
2005 2062 0.541392 CATCCCCGTGACCTCATTGA 59.459 55.000 0.00 0.00 0.00 2.57
2006 2063 0.541392 TCATCCCCGTGACCTCATTG 59.459 55.000 0.00 0.00 0.00 2.82
2007 2064 0.833287 CTCATCCCCGTGACCTCATT 59.167 55.000 0.00 0.00 0.00 2.57
2054 2111 0.952984 AGCGGCAGTTGAAAGAGAGC 60.953 55.000 1.45 0.00 0.00 4.09
2060 2117 1.098869 TGAAACAGCGGCAGTTGAAA 58.901 45.000 11.63 0.00 32.59 2.69
2158 2223 4.718774 AGACATAAAGAGAGCTGGATTGGA 59.281 41.667 0.00 0.00 0.00 3.53
2164 2229 5.105146 AGGTGTTAGACATAAAGAGAGCTGG 60.105 44.000 0.00 0.00 0.00 4.85
2179 2244 1.271163 CCAAAGGCGGAAGGTGTTAGA 60.271 52.381 0.00 0.00 0.00 2.10
2183 2248 0.822121 GAACCAAAGGCGGAAGGTGT 60.822 55.000 0.00 0.00 33.93 4.16
2191 2256 0.537371 AGGAAGTGGAACCAAAGGCG 60.537 55.000 0.00 0.00 37.80 5.52
2226 2300 4.560743 TGCGCAACCCTCACAGCA 62.561 61.111 8.16 0.00 0.00 4.41
2290 2364 1.767681 GTGAGGCATCCAGGAGAGAAT 59.232 52.381 0.00 0.00 0.00 2.40
2292 2366 0.689080 GGTGAGGCATCCAGGAGAGA 60.689 60.000 0.00 0.00 0.00 3.10
2322 2396 0.608856 CACCCCAAGCTGTGCATGTA 60.609 55.000 0.00 0.00 0.00 2.29
2326 2400 3.819652 ACCACCCCAAGCTGTGCA 61.820 61.111 0.00 0.00 0.00 4.57
2342 2416 7.834068 TTGACAGAGATGCTAATTTAGACAC 57.166 36.000 7.63 0.00 0.00 3.67
2343 2417 7.011763 GCATTGACAGAGATGCTAATTTAGACA 59.988 37.037 7.63 5.51 43.98 3.41
2344 2418 7.351223 GCATTGACAGAGATGCTAATTTAGAC 58.649 38.462 7.63 0.11 43.98 2.59
2345 2419 7.488187 GCATTGACAGAGATGCTAATTTAGA 57.512 36.000 7.63 0.00 43.98 2.10
2395 2469 9.581289 AGATGATACTATAGCACTAACAGACTT 57.419 33.333 0.00 0.00 0.00 3.01
2396 2470 9.226606 GAGATGATACTATAGCACTAACAGACT 57.773 37.037 0.00 0.00 0.00 3.24
2397 2471 9.226606 AGAGATGATACTATAGCACTAACAGAC 57.773 37.037 0.00 0.00 0.00 3.51
2403 2477 7.335673 GCACAGAGAGATGATACTATAGCACTA 59.664 40.741 0.00 0.00 0.00 2.74
2464 2538 5.168329 CGGAAAACAAACTTAAAACGAGTCG 59.832 40.000 11.85 11.85 0.00 4.18
2480 2557 4.124238 AGAACTGAACGAATCGGAAAACA 58.876 39.130 7.80 0.00 37.88 2.83
2481 2558 4.448060 AGAGAACTGAACGAATCGGAAAAC 59.552 41.667 7.80 0.00 37.88 2.43
2483 2560 4.252971 AGAGAACTGAACGAATCGGAAA 57.747 40.909 7.80 0.00 37.88 3.13
2485 2562 3.936372 AAGAGAACTGAACGAATCGGA 57.064 42.857 7.80 0.00 37.88 4.55
2486 2563 4.482386 TGTAAGAGAACTGAACGAATCGG 58.518 43.478 7.80 0.00 40.53 4.18
2487 2564 6.528423 AGAATGTAAGAGAACTGAACGAATCG 59.472 38.462 0.00 0.00 0.00 3.34
2488 2565 7.757624 AGAGAATGTAAGAGAACTGAACGAATC 59.242 37.037 0.00 0.00 0.00 2.52
2506 2583 7.701539 TGTTGCAAATACCATTAGAGAATGT 57.298 32.000 0.00 0.00 40.87 2.71
2516 2593 4.928615 CCATTTCGTTGTTGCAAATACCAT 59.071 37.500 0.00 0.00 0.00 3.55
2529 2606 5.088739 GCAGTGAGTTAATCCATTTCGTTG 58.911 41.667 0.00 0.00 0.00 4.10
2566 2643 7.653713 ACAGCACCTATGTTAAGATATTTCTCG 59.346 37.037 0.00 0.00 0.00 4.04
2878 3089 9.688091 CTATTAGAACCATCTACTAGGCTATCA 57.312 37.037 0.00 0.00 37.58 2.15
2885 3096 8.588290 ATCCTGCTATTAGAACCATCTACTAG 57.412 38.462 0.00 6.10 41.18 2.57
2890 3101 7.675062 CAACTATCCTGCTATTAGAACCATCT 58.325 38.462 0.00 0.00 39.82 2.90
2917 3128 7.657354 GGATATTTGCTTTCAGGTGTTTTTCTT 59.343 33.333 0.00 0.00 0.00 2.52
3073 3284 0.519519 CAGTTTTCGCCGCACCATTA 59.480 50.000 0.00 0.00 0.00 1.90
3085 3296 8.037758 TCATCTATCCTCTCTTCAACAGTTTTC 58.962 37.037 0.00 0.00 0.00 2.29
3127 3338 2.610232 GGAACCATTGAAAATGCGTGCT 60.610 45.455 0.00 0.00 0.00 4.40
3193 3404 0.109781 CCGGTTCGTTTCTGGCAATG 60.110 55.000 0.00 0.00 0.00 2.82
3313 3524 6.150140 ACCTTTTGTAGTTACGATCGTAGTCT 59.850 38.462 25.52 25.88 31.71 3.24
3437 3658 1.276138 CTCACACCATAGTCAGGCACA 59.724 52.381 0.00 0.00 0.00 4.57
3599 3820 0.759346 GGGTAGGCCACTGTGGATAG 59.241 60.000 30.23 4.16 40.96 2.08
3602 3823 2.609610 GGGGTAGGCCACTGTGGA 60.610 66.667 30.23 6.82 40.96 4.02
3650 3871 2.426024 CTGAGAAATCACATGGCCAAGG 59.574 50.000 10.96 8.08 0.00 3.61
3745 3966 9.302345 CATGATTAGAACACGTACTTAGACAAT 57.698 33.333 0.00 0.00 0.00 2.71
3756 3977 4.553330 ACCTTCCATGATTAGAACACGT 57.447 40.909 0.00 0.00 0.00 4.49
3772 3993 9.434559 GAAAACATAACAATATTCGCTACCTTC 57.565 33.333 0.00 0.00 0.00 3.46
3829 4051 3.190744 GCCAAGTTCTGTAAAGGGCTAAC 59.809 47.826 0.00 0.00 37.00 2.34
3860 4082 9.337396 CAATTAGGATAACAAACTGCTACCATA 57.663 33.333 0.00 0.00 0.00 2.74
3861 4083 7.201821 GCAATTAGGATAACAAACTGCTACCAT 60.202 37.037 0.00 0.00 0.00 3.55
3870 4092 6.476706 GCTTGGATGCAATTAGGATAACAAAC 59.523 38.462 0.00 0.00 29.27 2.93
3879 4101 1.684983 CCCAGCTTGGATGCAATTAGG 59.315 52.381 0.00 2.58 40.96 2.69
3882 4104 0.899720 CACCCAGCTTGGATGCAATT 59.100 50.000 11.55 0.00 40.96 2.32
3903 4125 8.936864 GTCTTATATTTTGATACGGAGGGATTG 58.063 37.037 0.00 0.00 0.00 2.67
3907 4129 6.453092 ACGTCTTATATTTTGATACGGAGGG 58.547 40.000 0.00 0.00 33.44 4.30
3908 4130 7.941795 AACGTCTTATATTTTGATACGGAGG 57.058 36.000 0.00 0.00 33.44 4.30
3910 4132 9.976255 CAAAAACGTCTTATATTTTGATACGGA 57.024 29.630 13.15 0.00 42.48 4.69
3911 4133 9.763465 ACAAAAACGTCTTATATTTTGATACGG 57.237 29.630 21.46 1.66 42.48 4.02
3916 4138 9.005777 AGCCTACAAAAACGTCTTATATTTTGA 57.994 29.630 21.46 9.08 42.48 2.69
3919 4141 9.662947 ACTAGCCTACAAAAACGTCTTATATTT 57.337 29.630 0.00 0.00 0.00 1.40
3920 4142 9.662947 AACTAGCCTACAAAAACGTCTTATATT 57.337 29.630 0.00 0.00 0.00 1.28
3921 4143 9.662947 AAACTAGCCTACAAAAACGTCTTATAT 57.337 29.630 0.00 0.00 0.00 0.86
3923 4145 7.974482 AAACTAGCCTACAAAAACGTCTTAT 57.026 32.000 0.00 0.00 0.00 1.73
3924 4146 8.359642 TCTAAACTAGCCTACAAAAACGTCTTA 58.640 33.333 0.00 0.00 0.00 2.10
3925 4147 7.170489 GTCTAAACTAGCCTACAAAAACGTCTT 59.830 37.037 0.00 0.00 0.00 3.01
3926 4148 6.644181 GTCTAAACTAGCCTACAAAAACGTCT 59.356 38.462 0.00 0.00 0.00 4.18
3927 4149 6.644181 AGTCTAAACTAGCCTACAAAAACGTC 59.356 38.462 0.00 0.00 32.59 4.34
3928 4150 6.519382 AGTCTAAACTAGCCTACAAAAACGT 58.481 36.000 0.00 0.00 32.59 3.99
3929 4151 7.596248 TGTAGTCTAAACTAGCCTACAAAAACG 59.404 37.037 2.88 0.00 42.31 3.60
3930 4152 8.822652 TGTAGTCTAAACTAGCCTACAAAAAC 57.177 34.615 2.88 0.00 42.31 2.43
3935 4157 7.596248 CGTTTTTGTAGTCTAAACTAGCCTACA 59.404 37.037 1.49 1.49 43.20 2.74
3936 4158 7.596621 ACGTTTTTGTAGTCTAAACTAGCCTAC 59.403 37.037 0.00 0.00 38.66 3.18
3937 4159 7.661040 ACGTTTTTGTAGTCTAAACTAGCCTA 58.339 34.615 0.00 0.00 38.66 3.93
3938 4160 6.519382 ACGTTTTTGTAGTCTAAACTAGCCT 58.481 36.000 0.00 0.00 38.66 4.58
3939 4161 6.644181 AGACGTTTTTGTAGTCTAAACTAGCC 59.356 38.462 0.00 0.00 42.71 3.93
3940 4162 7.634809 AGACGTTTTTGTAGTCTAAACTAGC 57.365 36.000 0.00 0.00 42.71 3.42
3948 4170 9.498176 ACCAAAATATAGACGTTTTTGTAGTCT 57.502 29.630 16.86 2.85 45.85 3.24
3956 4178 9.609346 AGCTATGTACCAAAATATAGACGTTTT 57.391 29.630 0.00 0.00 0.00 2.43
3958 4180 9.909644 CTAGCTATGTACCAAAATATAGACGTT 57.090 33.333 0.00 0.00 0.00 3.99
3959 4181 9.075678 ACTAGCTATGTACCAAAATATAGACGT 57.924 33.333 0.00 0.00 0.00 4.34
3967 4189 9.953565 TCACTTTTACTAGCTATGTACCAAAAT 57.046 29.630 0.00 0.00 0.00 1.82
3968 4190 9.431887 CTCACTTTTACTAGCTATGTACCAAAA 57.568 33.333 0.00 0.00 0.00 2.44
3969 4191 8.591072 ACTCACTTTTACTAGCTATGTACCAAA 58.409 33.333 0.00 0.00 0.00 3.28
3970 4192 8.130671 ACTCACTTTTACTAGCTATGTACCAA 57.869 34.615 0.00 0.00 0.00 3.67
3971 4193 7.147949 GGACTCACTTTTACTAGCTATGTACCA 60.148 40.741 0.00 0.00 0.00 3.25
3972 4194 7.068470 AGGACTCACTTTTACTAGCTATGTACC 59.932 40.741 0.00 0.00 0.00 3.34
3973 4195 7.998580 AGGACTCACTTTTACTAGCTATGTAC 58.001 38.462 0.00 0.00 0.00 2.90
3974 4196 8.591114 AAGGACTCACTTTTACTAGCTATGTA 57.409 34.615 0.00 0.00 0.00 2.29
3975 4197 7.363968 GGAAGGACTCACTTTTACTAGCTATGT 60.364 40.741 0.00 0.00 0.00 2.29
3976 4198 6.981559 GGAAGGACTCACTTTTACTAGCTATG 59.018 42.308 0.00 0.00 0.00 2.23
3977 4199 6.898521 AGGAAGGACTCACTTTTACTAGCTAT 59.101 38.462 0.00 0.00 0.00 2.97
3978 4200 6.254522 AGGAAGGACTCACTTTTACTAGCTA 58.745 40.000 0.00 0.00 0.00 3.32
3979 4201 5.088026 AGGAAGGACTCACTTTTACTAGCT 58.912 41.667 0.00 0.00 0.00 3.32
3980 4202 5.408880 AGGAAGGACTCACTTTTACTAGC 57.591 43.478 0.00 0.00 0.00 3.42
3981 4203 5.183522 ACGAGGAAGGACTCACTTTTACTAG 59.816 44.000 0.00 0.00 37.34 2.57
3982 4204 5.075493 ACGAGGAAGGACTCACTTTTACTA 58.925 41.667 0.00 0.00 37.34 1.82
3983 4205 3.896272 ACGAGGAAGGACTCACTTTTACT 59.104 43.478 0.00 0.00 37.34 2.24
3984 4206 4.236147 GACGAGGAAGGACTCACTTTTAC 58.764 47.826 0.00 0.00 37.34 2.01
3985 4207 3.893200 TGACGAGGAAGGACTCACTTTTA 59.107 43.478 0.00 0.00 37.34 1.52
3986 4208 2.698797 TGACGAGGAAGGACTCACTTTT 59.301 45.455 0.00 0.00 37.34 2.27
3987 4209 2.317040 TGACGAGGAAGGACTCACTTT 58.683 47.619 0.00 0.00 37.34 2.66
3988 4210 1.996798 TGACGAGGAAGGACTCACTT 58.003 50.000 0.00 0.00 37.34 3.16
3989 4211 1.821753 CATGACGAGGAAGGACTCACT 59.178 52.381 0.00 0.00 37.34 3.41
3990 4212 1.737363 GCATGACGAGGAAGGACTCAC 60.737 57.143 0.00 0.00 37.34 3.51
3991 4213 0.532573 GCATGACGAGGAAGGACTCA 59.467 55.000 0.00 0.00 37.34 3.41
3996 4218 0.745845 CTTGGGCATGACGAGGAAGG 60.746 60.000 0.00 0.00 0.00 3.46
4036 4258 3.383505 CGGGGTCATGACTCATAACTACA 59.616 47.826 26.63 0.00 32.11 2.74
4049 4271 0.601576 TTGTTCACGACGGGGTCATG 60.602 55.000 0.00 0.00 32.09 3.07
4082 4305 0.874390 CAAGCGTCAAGGCAAAGCTA 59.126 50.000 0.00 0.00 37.15 3.32
4089 4313 0.668535 AACCTTTCAAGCGTCAAGGC 59.331 50.000 6.96 0.00 40.85 4.35
4092 4316 2.912771 TGAGAACCTTTCAAGCGTCAA 58.087 42.857 0.00 0.00 0.00 3.18
4145 4369 2.557924 CCAGCAGCAAACAAGATACCAA 59.442 45.455 0.00 0.00 0.00 3.67
4166 4390 6.294231 GGAACAAAAGAGAGAAAGGTTGGATC 60.294 42.308 0.00 0.00 0.00 3.36
4202 4426 6.207509 ACAGAGGGAGTAGAATAGAGCATA 57.792 41.667 0.00 0.00 0.00 3.14
4216 4441 3.955551 GAGGGAGTAGTTTACAGAGGGAG 59.044 52.174 0.00 0.00 0.00 4.30
4217 4442 3.309701 GGAGGGAGTAGTTTACAGAGGGA 60.310 52.174 0.00 0.00 0.00 4.20
4219 4444 2.688958 CGGAGGGAGTAGTTTACAGAGG 59.311 54.545 0.00 0.00 0.00 3.69
4220 4445 3.354467 ACGGAGGGAGTAGTTTACAGAG 58.646 50.000 0.00 0.00 0.00 3.35
4222 4447 2.426381 GGACGGAGGGAGTAGTTTACAG 59.574 54.545 0.00 0.00 0.00 2.74
4224 4449 1.753649 GGGACGGAGGGAGTAGTTTAC 59.246 57.143 0.00 0.00 0.00 2.01
4226 4451 0.115745 TGGGACGGAGGGAGTAGTTT 59.884 55.000 0.00 0.00 0.00 2.66
4228 4453 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
4229 4454 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
4230 4455 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4232 4457 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4234 4459 1.751437 GAGAATTTTGGGACGGAGGG 58.249 55.000 0.00 0.00 0.00 4.30
4235 4460 1.338769 ACGAGAATTTTGGGACGGAGG 60.339 52.381 0.00 0.00 0.00 4.30
4236 4461 2.000447 GACGAGAATTTTGGGACGGAG 59.000 52.381 0.00 0.00 0.00 4.63
4237 4462 1.621814 AGACGAGAATTTTGGGACGGA 59.378 47.619 0.00 0.00 0.00 4.69
4238 4463 2.094762 AGACGAGAATTTTGGGACGG 57.905 50.000 0.00 0.00 0.00 4.79
4239 4464 2.092211 CGAAGACGAGAATTTTGGGACG 59.908 50.000 0.00 0.00 42.66 4.79
4240 4465 3.323243 TCGAAGACGAGAATTTTGGGAC 58.677 45.455 0.00 0.00 43.81 4.46
4241 4466 3.671008 TCGAAGACGAGAATTTTGGGA 57.329 42.857 0.00 0.00 43.81 4.37
4253 4478 4.904724 CCGTATCTAGACAAATCGAAGACG 59.095 45.833 0.00 0.00 42.51 4.18
4254 4479 6.057627 TCCGTATCTAGACAAATCGAAGAC 57.942 41.667 0.00 0.00 42.51 3.01
4255 4480 6.262496 ACATCCGTATCTAGACAAATCGAAGA 59.738 38.462 0.00 0.00 45.75 2.87
4256 4481 6.439599 ACATCCGTATCTAGACAAATCGAAG 58.560 40.000 0.00 0.00 0.00 3.79
4257 4482 6.387041 ACATCCGTATCTAGACAAATCGAA 57.613 37.500 0.00 0.00 0.00 3.71
4258 4483 7.683437 ATACATCCGTATCTAGACAAATCGA 57.317 36.000 0.00 0.00 32.66 3.59
4272 4497 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
4273 4498 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
4274 4499 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
4275 4500 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
4285 4510 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
4286 4511 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
4287 4512 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
4288 4513 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
4289 4514 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
4290 4515 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
4291 4516 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
4292 4517 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
4293 4518 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
4294 4519 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
4295 4520 7.688478 TTAAATACGGATGTATCAAGTCACG 57.312 36.000 0.00 0.00 40.42 4.35
4296 4521 8.875803 TGTTTAAATACGGATGTATCAAGTCAC 58.124 33.333 0.00 0.00 40.42 3.67
4297 4522 9.438228 TTGTTTAAATACGGATGTATCAAGTCA 57.562 29.630 0.00 0.00 40.42 3.41
4318 4543 9.546428 CCCAAAATTCTTGTCTTAGATTTGTTT 57.454 29.630 0.00 0.00 28.79 2.83
4319 4544 8.923270 TCCCAAAATTCTTGTCTTAGATTTGTT 58.077 29.630 0.00 0.00 28.79 2.83
4320 4545 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4321 4546 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4322 4547 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4323 4548 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4324 4549 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4325 4550 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4326 4551 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4327 4552 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4328 4553 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4329 4554 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4330 4555 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4331 4556 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4332 4557 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4333 4558 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4334 4559 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4335 4560 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4336 4561 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4337 4562 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4338 4563 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
4339 4564 1.961133 ATTACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
4340 4565 2.852714 TATTACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
4341 4566 4.106825 TCTTATATTACTCCCTCCGTCCCA 59.893 45.833 0.00 0.00 0.00 4.37
4342 4567 4.670765 TCTTATATTACTCCCTCCGTCCC 58.329 47.826 0.00 0.00 0.00 4.46
4343 4568 4.158209 GCTCTTATATTACTCCCTCCGTCC 59.842 50.000 0.00 0.00 0.00 4.79
4344 4569 4.142643 CGCTCTTATATTACTCCCTCCGTC 60.143 50.000 0.00 0.00 0.00 4.79
4345 4570 3.757493 CGCTCTTATATTACTCCCTCCGT 59.243 47.826 0.00 0.00 0.00 4.69
4346 4571 3.757493 ACGCTCTTATATTACTCCCTCCG 59.243 47.826 0.00 0.00 0.00 4.63
4347 4572 5.725325 AACGCTCTTATATTACTCCCTCC 57.275 43.478 0.00 0.00 0.00 4.30
4348 4573 8.108551 TCTAAACGCTCTTATATTACTCCCTC 57.891 38.462 0.00 0.00 0.00 4.30
4349 4574 8.653036 ATCTAAACGCTCTTATATTACTCCCT 57.347 34.615 0.00 0.00 0.00 4.20
4350 4575 8.521176 TGATCTAAACGCTCTTATATTACTCCC 58.479 37.037 0.00 0.00 0.00 4.30
4351 4576 9.344309 GTGATCTAAACGCTCTTATATTACTCC 57.656 37.037 0.00 0.00 0.00 3.85
4353 4578 9.900710 CAGTGATCTAAACGCTCTTATATTACT 57.099 33.333 0.00 0.00 0.00 2.24
4354 4579 9.894783 TCAGTGATCTAAACGCTCTTATATTAC 57.105 33.333 0.00 0.00 0.00 1.89
4356 4581 9.469807 CTTCAGTGATCTAAACGCTCTTATATT 57.530 33.333 0.00 0.00 0.00 1.28
4357 4582 8.634444 ACTTCAGTGATCTAAACGCTCTTATAT 58.366 33.333 0.00 0.00 0.00 0.86
4358 4583 7.997482 ACTTCAGTGATCTAAACGCTCTTATA 58.003 34.615 0.00 0.00 0.00 0.98
4359 4584 6.868622 ACTTCAGTGATCTAAACGCTCTTAT 58.131 36.000 0.00 0.00 0.00 1.73
4360 4585 6.268825 ACTTCAGTGATCTAAACGCTCTTA 57.731 37.500 0.00 0.00 0.00 2.10
4361 4586 5.140747 ACTTCAGTGATCTAAACGCTCTT 57.859 39.130 0.00 0.00 0.00 2.85
4362 4587 4.792521 ACTTCAGTGATCTAAACGCTCT 57.207 40.909 0.00 0.00 0.00 4.09
4363 4588 5.642686 ACTACTTCAGTGATCTAAACGCTC 58.357 41.667 0.00 0.00 35.62 5.03
4364 4589 5.646577 ACTACTTCAGTGATCTAAACGCT 57.353 39.130 0.00 0.00 35.62 5.07
4376 4601 6.456501 AGAGCGTTTAAATCACTACTTCAGT 58.543 36.000 0.00 0.00 38.32 3.41
4377 4602 6.952935 AGAGCGTTTAAATCACTACTTCAG 57.047 37.500 0.00 0.00 0.00 3.02
4378 4603 8.997621 ATAAGAGCGTTTAAATCACTACTTCA 57.002 30.769 0.00 0.00 0.00 3.02
4391 4616 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
4392 4617 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
4393 4618 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
4394 4619 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
4395 4620 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
4396 4621 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
4397 4622 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
4405 4630 9.592196 ACATTATATACTCCCTCCGTAAACTAA 57.408 33.333 0.00 0.00 0.00 2.24
4406 4631 9.592196 AACATTATATACTCCCTCCGTAAACTA 57.408 33.333 0.00 0.00 0.00 2.24
4407 4632 8.488308 AACATTATATACTCCCTCCGTAAACT 57.512 34.615 0.00 0.00 0.00 2.66
4408 4633 8.985805 CAAACATTATATACTCCCTCCGTAAAC 58.014 37.037 0.00 0.00 0.00 2.01
4409 4634 8.926374 TCAAACATTATATACTCCCTCCGTAAA 58.074 33.333 0.00 0.00 0.00 2.01
4410 4635 8.481492 TCAAACATTATATACTCCCTCCGTAA 57.519 34.615 0.00 0.00 0.00 3.18
4411 4636 8.660295 ATCAAACATTATATACTCCCTCCGTA 57.340 34.615 0.00 0.00 0.00 4.02
4412 4637 6.989155 TCAAACATTATATACTCCCTCCGT 57.011 37.500 0.00 0.00 0.00 4.69
4413 4638 8.848474 AAATCAAACATTATATACTCCCTCCG 57.152 34.615 0.00 0.00 0.00 4.63
4414 4639 8.936864 CGAAATCAAACATTATATACTCCCTCC 58.063 37.037 0.00 0.00 0.00 4.30
4415 4640 8.936864 CCGAAATCAAACATTATATACTCCCTC 58.063 37.037 0.00 0.00 0.00 4.30
4416 4641 8.437575 ACCGAAATCAAACATTATATACTCCCT 58.562 33.333 0.00 0.00 0.00 4.20
4417 4642 8.617290 ACCGAAATCAAACATTATATACTCCC 57.383 34.615 0.00 0.00 0.00 4.30
4427 4652 7.222611 GCAAGCAATATACCGAAATCAAACATT 59.777 33.333 0.00 0.00 0.00 2.71
4434 4659 4.036262 TGTGGCAAGCAATATACCGAAATC 59.964 41.667 0.00 0.00 0.00 2.17
4441 4666 4.701956 ACTGTTGTGGCAAGCAATATAC 57.298 40.909 0.00 0.00 0.00 1.47
4493 4718 5.615984 GCAGATACGTTTCGAATTCAACCAA 60.616 40.000 6.22 0.00 0.00 3.67
4495 4720 4.331962 GCAGATACGTTTCGAATTCAACC 58.668 43.478 6.22 0.00 0.00 3.77
4529 4754 1.394917 CACGCAGTAAATGAGACCAGC 59.605 52.381 0.00 0.00 41.61 4.85
4530 4755 2.959516 TCACGCAGTAAATGAGACCAG 58.040 47.619 0.00 0.00 41.61 4.00
4539 4764 4.800993 CCAACAAACATTTCACGCAGTAAA 59.199 37.500 0.00 0.00 41.61 2.01
4543 4768 2.808244 ACCAACAAACATTTCACGCAG 58.192 42.857 0.00 0.00 0.00 5.18
4545 4770 3.443976 AGAACCAACAAACATTTCACGC 58.556 40.909 0.00 0.00 0.00 5.34
4546 4771 4.920376 AGAGAACCAACAAACATTTCACG 58.080 39.130 0.00 0.00 0.00 4.35
4562 4787 6.431198 TGGAGTGTTTGTTTGTTAGAGAAC 57.569 37.500 0.00 0.00 36.00 3.01
4567 4792 9.581099 AATAAAGTTGGAGTGTTTGTTTGTTAG 57.419 29.630 0.00 0.00 0.00 2.34
4568 4793 9.930693 AAATAAAGTTGGAGTGTTTGTTTGTTA 57.069 25.926 0.00 0.00 0.00 2.41
4569 4794 8.840833 AAATAAAGTTGGAGTGTTTGTTTGTT 57.159 26.923 0.00 0.00 0.00 2.83
4571 4796 8.930760 TGAAAATAAAGTTGGAGTGTTTGTTTG 58.069 29.630 0.00 0.00 28.65 2.93
4572 4797 9.665719 ATGAAAATAAAGTTGGAGTGTTTGTTT 57.334 25.926 0.00 0.00 0.00 2.83
4573 4798 9.097257 CATGAAAATAAAGTTGGAGTGTTTGTT 57.903 29.630 0.00 0.00 0.00 2.83
4574 4799 8.257306 ACATGAAAATAAAGTTGGAGTGTTTGT 58.743 29.630 0.00 0.00 0.00 2.83
4575 4800 8.647143 ACATGAAAATAAAGTTGGAGTGTTTG 57.353 30.769 0.00 0.00 0.00 2.93
4576 4801 8.474025 TGACATGAAAATAAAGTTGGAGTGTTT 58.526 29.630 0.00 0.00 0.00 2.83
4577 4802 8.006298 TGACATGAAAATAAAGTTGGAGTGTT 57.994 30.769 0.00 0.00 0.00 3.32
4578 4803 7.581213 TGACATGAAAATAAAGTTGGAGTGT 57.419 32.000 0.00 0.00 0.00 3.55
4579 4804 8.084073 ACATGACATGAAAATAAAGTTGGAGTG 58.916 33.333 22.19 0.00 0.00 3.51
4604 4830 2.350772 CGGAACCTGCAACATTGAGAAC 60.351 50.000 0.00 0.00 0.00 3.01
4605 4831 1.879380 CGGAACCTGCAACATTGAGAA 59.121 47.619 0.00 0.00 0.00 2.87
4607 4833 0.523072 CCGGAACCTGCAACATTGAG 59.477 55.000 0.00 0.00 0.00 3.02
4608 4834 0.179004 ACCGGAACCTGCAACATTGA 60.179 50.000 9.46 0.00 0.00 2.57
4609 4835 0.039256 CACCGGAACCTGCAACATTG 60.039 55.000 9.46 0.00 0.00 2.82
4649 4890 2.896685 CCCAGGAAGTAGCATCTCCTAG 59.103 54.545 0.00 0.00 0.00 3.02
4666 4909 4.281688 ACAAATTCTGTTCCAACATCCCAG 59.718 41.667 0.00 0.00 38.41 4.45
4682 4925 7.060633 CACGACATAGCAGGTTTTAACAAATTC 59.939 37.037 0.00 0.00 0.00 2.17
4687 4930 4.382291 ACACGACATAGCAGGTTTTAACA 58.618 39.130 0.00 0.00 0.00 2.41
4688 4931 5.144359 CAACACGACATAGCAGGTTTTAAC 58.856 41.667 0.00 0.00 0.00 2.01
4714 4957 7.985184 TCCAAAATAGATAGACGCACTTAACAT 59.015 33.333 0.00 0.00 0.00 2.71
4728 4971 8.167392 TGGGAAAAACTGACTCCAAAATAGATA 58.833 33.333 0.00 0.00 0.00 1.98
4729 4972 7.010160 TGGGAAAAACTGACTCCAAAATAGAT 58.990 34.615 0.00 0.00 0.00 1.98
4730 4973 6.369629 TGGGAAAAACTGACTCCAAAATAGA 58.630 36.000 0.00 0.00 0.00 1.98
4731 4974 6.648879 TGGGAAAAACTGACTCCAAAATAG 57.351 37.500 0.00 0.00 0.00 1.73
4836 5082 5.912528 ACATAAGTAAACGAGCAAAAGACG 58.087 37.500 0.00 0.00 0.00 4.18
4856 5102 3.091633 AGAGTGCTTGGCCAAATACAT 57.908 42.857 25.28 15.08 0.00 2.29
4866 5112 5.038033 GTCGAATAGAGTAAGAGTGCTTGG 58.962 45.833 0.00 0.00 35.56 3.61
4867 5113 5.641709 TGTCGAATAGAGTAAGAGTGCTTG 58.358 41.667 0.00 0.00 35.56 4.01
4889 5137 4.439700 GCAGGGAGTGATGTTTCATGAATG 60.440 45.833 9.40 1.01 33.56 2.67
4894 5142 1.637553 AGGCAGGGAGTGATGTTTCAT 59.362 47.619 0.00 0.00 33.56 2.57
4898 5146 0.610232 GCAAGGCAGGGAGTGATGTT 60.610 55.000 0.00 0.00 0.00 2.71
4925 5173 2.813908 GTTGTACGCGCCCTCAGG 60.814 66.667 5.73 0.00 0.00 3.86
4961 5209 1.167851 CACCACTGGCACCAACTATG 58.832 55.000 0.00 0.00 0.00 2.23
4962 5210 0.038166 CCACCACTGGCACCAACTAT 59.962 55.000 0.00 0.00 0.00 2.12
4963 5211 1.057275 TCCACCACTGGCACCAACTA 61.057 55.000 0.00 0.00 37.49 2.24
4964 5212 2.195683 CCACCACTGGCACCAACT 59.804 61.111 0.00 0.00 0.00 3.16
4965 5213 2.193536 GTCCACCACTGGCACCAAC 61.194 63.158 0.00 0.00 37.49 3.77
4966 5214 2.194597 GTCCACCACTGGCACCAA 59.805 61.111 0.00 0.00 37.49 3.67
4967 5215 2.974435 TAGGTCCACCACTGGCACCA 62.974 60.000 12.14 0.00 37.49 4.17
4968 5216 2.185310 CTAGGTCCACCACTGGCACC 62.185 65.000 0.00 0.00 37.49 5.01
4969 5217 1.296715 CTAGGTCCACCACTGGCAC 59.703 63.158 0.00 0.00 37.49 5.01
4970 5218 0.115547 TACTAGGTCCACCACTGGCA 59.884 55.000 0.00 0.00 37.49 4.92
4971 5219 1.413077 GATACTAGGTCCACCACTGGC 59.587 57.143 0.00 0.00 37.49 4.85
4972 5220 3.033659 AGATACTAGGTCCACCACTGG 57.966 52.381 0.00 0.00 38.89 4.00
4973 5221 4.038162 GCTAAGATACTAGGTCCACCACTG 59.962 50.000 0.00 0.00 38.89 3.66
4974 5222 4.216708 GCTAAGATACTAGGTCCACCACT 58.783 47.826 0.00 0.00 38.89 4.00
4975 5223 3.958798 TGCTAAGATACTAGGTCCACCAC 59.041 47.826 0.00 0.00 38.89 4.16
4976 5224 4.259933 TGCTAAGATACTAGGTCCACCA 57.740 45.455 0.00 0.00 38.89 4.17
4977 5225 5.810080 AATGCTAAGATACTAGGTCCACC 57.190 43.478 0.00 0.00 0.00 4.61
4978 5226 5.992217 CCAAATGCTAAGATACTAGGTCCAC 59.008 44.000 0.00 0.00 0.00 4.02
4979 5227 5.071788 CCCAAATGCTAAGATACTAGGTCCA 59.928 44.000 0.00 0.00 0.00 4.02
4980 5228 5.513267 CCCCAAATGCTAAGATACTAGGTCC 60.513 48.000 0.00 0.00 0.00 4.46
5000 5248 2.916703 GCACATTGTGGCACCCCA 60.917 61.111 16.26 0.00 39.32 4.96
5016 5264 4.155826 TGAAGTTGTGTTGCCTATGTATGC 59.844 41.667 0.00 0.00 0.00 3.14
5023 5271 1.946768 GCACTGAAGTTGTGTTGCCTA 59.053 47.619 0.00 0.00 37.70 3.93
5024 5272 0.740737 GCACTGAAGTTGTGTTGCCT 59.259 50.000 0.00 0.00 37.70 4.75
5025 5273 0.455410 TGCACTGAAGTTGTGTTGCC 59.545 50.000 0.00 0.00 37.70 4.52
5026 5274 1.548986 GTGCACTGAAGTTGTGTTGC 58.451 50.000 10.32 0.00 37.70 4.17
5027 5275 1.745087 AGGTGCACTGAAGTTGTGTTG 59.255 47.619 17.98 0.00 37.70 3.33
5028 5276 2.128771 AGGTGCACTGAAGTTGTGTT 57.871 45.000 17.98 0.00 37.70 3.32
5029 5277 3.882131 AGGTGCACTGAAGTTGTGT 57.118 47.368 17.98 0.00 37.70 3.72
5057 5305 7.633193 ACTGTTTGTAGTGTAAAATTCACCA 57.367 32.000 0.00 0.00 36.58 4.17
5092 5340 5.353956 CAGTGGGAATTATGATCGTGTTTCA 59.646 40.000 0.00 0.00 0.00 2.69
5119 5368 8.336235 TGATTACTTGATCCTATTTTTGGAGGT 58.664 33.333 0.00 0.00 36.99 3.85
5147 5396 6.070251 TCCAGCTCATCACAAATCCTAGTAAA 60.070 38.462 0.00 0.00 0.00 2.01
5180 5429 2.418471 CCAGCAGGCTACTCTCTCTTTG 60.418 54.545 0.00 0.00 0.00 2.77
5186 5435 0.387565 GCTACCAGCAGGCTACTCTC 59.612 60.000 0.00 0.00 41.89 3.20
5194 5443 3.196685 AGACTTAAGAAGCTACCAGCAGG 59.803 47.826 10.09 0.00 45.56 4.85
5245 5522 5.295152 ACCTACAAGTCAGTTAAAGAACCG 58.705 41.667 0.00 0.00 36.08 4.44
5246 5523 6.073927 CGAACCTACAAGTCAGTTAAAGAACC 60.074 42.308 0.00 0.00 36.08 3.62
5250 5527 6.214399 ACTCGAACCTACAAGTCAGTTAAAG 58.786 40.000 0.00 0.00 0.00 1.85
5251 5528 6.152932 ACTCGAACCTACAAGTCAGTTAAA 57.847 37.500 0.00 0.00 0.00 1.52
5252 5529 5.561532 CGACTCGAACCTACAAGTCAGTTAA 60.562 44.000 0.00 0.00 38.41 2.01
5254 5531 3.304525 CGACTCGAACCTACAAGTCAGTT 60.305 47.826 0.00 0.00 38.41 3.16
5258 5535 2.985406 ACGACTCGAACCTACAAGTC 57.015 50.000 5.20 0.00 35.81 3.01
5259 5536 3.058639 GTGTACGACTCGAACCTACAAGT 60.059 47.826 5.20 0.00 0.00 3.16
5260 5537 3.058708 TGTGTACGACTCGAACCTACAAG 60.059 47.826 5.20 0.00 0.00 3.16
5296 5573 3.152341 ACAGATTCTGGCCAAGAGTTTG 58.848 45.455 17.66 11.09 35.91 2.93
5297 5574 3.515602 ACAGATTCTGGCCAAGAGTTT 57.484 42.857 17.66 0.00 35.91 2.66
5298 5575 4.640771 TTACAGATTCTGGCCAAGAGTT 57.359 40.909 17.66 0.00 35.91 3.01
5299 5576 4.851639 ATTACAGATTCTGGCCAAGAGT 57.148 40.909 17.66 3.21 35.91 3.24
5300 5577 5.180868 GCATATTACAGATTCTGGCCAAGAG 59.819 44.000 17.66 0.00 35.91 2.85
5301 5578 5.065914 GCATATTACAGATTCTGGCCAAGA 58.934 41.667 17.66 3.54 35.51 3.02
5302 5579 5.048921 CAGCATATTACAGATTCTGGCCAAG 60.049 44.000 17.66 0.66 35.51 3.61
5303 5580 4.823442 CAGCATATTACAGATTCTGGCCAA 59.177 41.667 17.66 8.90 35.51 4.52
5304 5581 4.392047 CAGCATATTACAGATTCTGGCCA 58.608 43.478 17.66 4.71 35.51 5.36
5305 5582 3.190118 GCAGCATATTACAGATTCTGGCC 59.810 47.826 17.66 0.00 35.51 5.36
5306 5583 3.190118 GGCAGCATATTACAGATTCTGGC 59.810 47.826 17.66 9.88 38.20 4.85
5307 5584 4.454847 CAGGCAGCATATTACAGATTCTGG 59.545 45.833 17.66 0.29 35.51 3.86
5308 5585 4.083431 GCAGGCAGCATATTACAGATTCTG 60.083 45.833 12.17 12.17 44.79 3.02
5309 5586 4.070716 GCAGGCAGCATATTACAGATTCT 58.929 43.478 0.00 0.00 44.79 2.40
5310 5587 4.416505 GCAGGCAGCATATTACAGATTC 57.583 45.455 0.00 0.00 44.79 2.52
5341 5618 3.189495 GTCCTTCTCCAAGCTAAGTTTGC 59.811 47.826 0.61 0.61 0.00 3.68
5367 5644 6.902224 AGTTTGCTTTTGGACAATTGTAAC 57.098 33.333 11.95 8.84 0.00 2.50
5389 5666 3.432782 GTCCGACCGTAGATGTTGTAAG 58.567 50.000 0.00 0.00 0.00 2.34
5405 5682 2.133742 GACCGGTTTGAGACGTCCGA 62.134 60.000 9.42 0.58 44.86 4.55
5409 5686 0.748450 TTGAGACCGGTTTGAGACGT 59.252 50.000 9.42 0.00 0.00 4.34
5430 5707 1.257743 GGTGCTAGTCAGTCCAGACA 58.742 55.000 0.00 0.00 40.98 3.41
5432 5709 0.614979 GGGGTGCTAGTCAGTCCAGA 60.615 60.000 0.00 0.00 0.00 3.86
5434 5711 0.614979 GAGGGGTGCTAGTCAGTCCA 60.615 60.000 0.00 0.00 0.00 4.02
5463 5740 3.557898 CCTCATATCTGTTCCGGAATGGG 60.558 52.174 22.04 13.11 38.76 4.00
5470 5747 0.946221 GCCGCCTCATATCTGTTCCG 60.946 60.000 0.00 0.00 0.00 4.30
5471 5748 0.603975 GGCCGCCTCATATCTGTTCC 60.604 60.000 0.71 0.00 0.00 3.62
5473 5750 1.451936 GGGCCGCCTCATATCTGTT 59.548 57.895 9.86 0.00 0.00 3.16
5476 5753 3.314331 CCGGGCCGCCTCATATCT 61.314 66.667 23.20 0.00 0.00 1.98
5502 5779 0.179171 AGCATCAGTCCGACGTTACG 60.179 55.000 2.19 2.19 0.00 3.18
5504 5781 0.098200 CGAGCATCAGTCCGACGTTA 59.902 55.000 0.00 0.00 33.17 3.18
5505 5782 1.154016 CGAGCATCAGTCCGACGTT 60.154 57.895 0.00 0.00 33.17 3.99
5514 5791 1.335415 CGTATGAGACCCGAGCATCAG 60.335 57.143 0.00 0.00 33.17 2.90
5520 5797 1.003759 CGACTTCGTATGAGACCCGAG 60.004 57.143 0.00 0.00 34.11 4.63
5522 5799 0.029035 CCGACTTCGTATGAGACCCG 59.971 60.000 0.00 0.00 37.74 5.28
5526 5803 2.981898 TCAGTCCGACTTCGTATGAGA 58.018 47.619 0.00 0.00 37.74 3.27
5527 5804 3.622828 CATCAGTCCGACTTCGTATGAG 58.377 50.000 0.00 0.00 37.74 2.90
5528 5805 2.223502 GCATCAGTCCGACTTCGTATGA 60.224 50.000 0.00 0.00 37.74 2.15
5529 5806 2.120232 GCATCAGTCCGACTTCGTATG 58.880 52.381 0.00 2.51 37.74 2.39
5530 5807 2.025155 AGCATCAGTCCGACTTCGTAT 58.975 47.619 0.00 0.00 37.74 3.06
5531 5808 1.400846 GAGCATCAGTCCGACTTCGTA 59.599 52.381 0.00 0.00 33.95 3.43
5532 5809 0.171455 GAGCATCAGTCCGACTTCGT 59.829 55.000 0.00 0.00 33.95 3.85
5533 5810 0.863538 CGAGCATCAGTCCGACTTCG 60.864 60.000 0.00 1.72 35.12 3.79
5534 5811 0.526524 CCGAGCATCAGTCCGACTTC 60.527 60.000 0.00 0.00 33.17 3.01
5535 5812 1.251527 ACCGAGCATCAGTCCGACTT 61.252 55.000 0.00 0.00 33.17 3.01
5536 5813 1.658686 GACCGAGCATCAGTCCGACT 61.659 60.000 0.00 0.00 36.54 4.18
5537 5814 1.226717 GACCGAGCATCAGTCCGAC 60.227 63.158 0.00 0.00 36.54 4.79
5538 5815 1.377366 GAGACCGAGCATCAGTCCGA 61.377 60.000 0.00 0.00 43.49 4.55
5539 5816 1.064946 GAGACCGAGCATCAGTCCG 59.935 63.158 0.00 0.00 43.49 4.79
5540 5817 0.749649 ATGAGACCGAGCATCAGTCC 59.250 55.000 0.00 0.00 43.49 3.85
5541 5818 2.603412 CGTATGAGACCGAGCATCAGTC 60.603 54.545 0.00 0.00 42.80 3.51
5542 5819 1.335182 CGTATGAGACCGAGCATCAGT 59.665 52.381 0.00 0.00 33.17 3.41
5543 5820 1.604278 TCGTATGAGACCGAGCATCAG 59.396 52.381 0.00 0.00 33.17 2.90
5544 5821 1.675552 TCGTATGAGACCGAGCATCA 58.324 50.000 0.00 0.00 33.17 3.07
5545 5822 2.776312 TTCGTATGAGACCGAGCATC 57.224 50.000 0.00 0.00 34.16 3.91
5546 5823 3.643763 GATTTCGTATGAGACCGAGCAT 58.356 45.455 0.00 0.00 34.16 3.79
5547 5824 2.540973 CGATTTCGTATGAGACCGAGCA 60.541 50.000 0.00 0.00 34.16 4.26
5548 5825 2.044860 CGATTTCGTATGAGACCGAGC 58.955 52.381 0.00 0.00 34.16 5.03
5549 5826 2.044860 GCGATTTCGTATGAGACCGAG 58.955 52.381 0.00 0.00 42.22 4.63
5550 5827 1.674441 AGCGATTTCGTATGAGACCGA 59.326 47.619 0.00 0.00 42.22 4.69
5551 5828 2.044860 GAGCGATTTCGTATGAGACCG 58.955 52.381 1.55 0.00 42.22 4.79
5619 5904 1.462432 TGCCTAGTGTTGGGGGTCA 60.462 57.895 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.