Multiple sequence alignment - TraesCS1B01G268500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G268500 chr1B 100.000 5524 0 0 1 5524 471198176 471192653 0.000000e+00 10202.0
1 TraesCS1B01G268500 chr1B 100.000 41 0 0 3432 3472 471194705 471194665 5.930000e-10 76.8
2 TraesCS1B01G268500 chr1B 100.000 41 0 0 3472 3512 471194745 471194705 5.930000e-10 76.8
3 TraesCS1B01G268500 chr1D 93.080 2760 97 42 35 2737 349567014 349564292 0.000000e+00 3952.0
4 TraesCS1B01G268500 chr1D 94.073 1198 62 3 3822 5013 349563505 349562311 0.000000e+00 1810.0
5 TraesCS1B01G268500 chr1D 92.697 356 22 3 3475 3829 349563881 349563529 1.370000e-140 510.0
6 TraesCS1B01G268500 chr1D 95.498 311 13 1 5213 5523 349561203 349560894 3.840000e-136 496.0
7 TraesCS1B01G268500 chr1D 92.727 165 12 0 3156 3320 349564297 349564133 7.150000e-59 239.0
8 TraesCS1B01G268500 chr1A 94.428 2064 81 20 536 2590 449857647 449855609 0.000000e+00 3144.0
9 TraesCS1B01G268500 chr1A 92.113 1344 78 18 3475 4802 449854997 449853666 0.000000e+00 1869.0
10 TraesCS1B01G268500 chr1A 84.551 479 31 15 1 469 449858094 449857649 8.500000e-118 435.0
11 TraesCS1B01G268500 chr1A 88.674 362 22 11 5163 5523 449853317 449852974 1.840000e-114 424.0
12 TraesCS1B01G268500 chr1A 93.778 225 14 0 3156 3380 449855306 449855082 6.850000e-89 339.0
13 TraesCS1B01G268500 chr1A 94.969 159 7 1 2579 2737 449855458 449855301 1.190000e-61 248.0
14 TraesCS1B01G268500 chr1A 83.333 228 24 4 4800 5013 449853585 449853358 1.210000e-46 198.0
15 TraesCS1B01G268500 chr1A 90.000 70 6 1 3403 3472 449855028 449854960 7.620000e-14 89.8
16 TraesCS1B01G268500 chr2A 89.880 415 39 3 2738 3151 16708724 16709136 1.050000e-146 531.0
17 TraesCS1B01G268500 chr2A 90.323 372 33 3 2780 3150 627933277 627932908 8.320000e-133 484.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G268500 chr1B 471192653 471198176 5523 True 3451.866667 10202 100.00000 1 5524 3 chr1B.!!$R1 5523
1 TraesCS1B01G268500 chr1D 349560894 349567014 6120 True 1401.400000 3952 93.61500 35 5523 5 chr1D.!!$R1 5488
2 TraesCS1B01G268500 chr1A 449852974 449858094 5120 True 843.350000 3144 90.23075 1 5523 8 chr1A.!!$R1 5522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
477 538 0.034960 GAGCCAGAACCTTCCCTTCC 60.035 60.000 0.00 0.0 0.00 3.46 F
478 539 1.000771 GCCAGAACCTTCCCTTCCC 60.001 63.158 0.00 0.0 0.00 3.97 F
769 840 1.067071 GTCCCTTTCACCACGGACTAG 60.067 57.143 0.00 0.0 41.36 2.57 F
2863 3136 0.037975 CTGGTGGCCTCACAATTTGC 60.038 55.000 3.32 0.0 45.32 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2442 2550 0.179045 GCGGCAATGGTCCATCTACT 60.179 55.00 4.39 0.0 0.0 2.57 R
2654 2926 9.851686 AATATTATTCTCTGTAGCATTTGGTCA 57.148 29.63 0.00 0.0 0.0 4.02 R
2890 3163 0.035056 GCTTCTCCCAGGCTAAGCAA 60.035 55.00 12.80 0.0 43.0 3.91 R
4549 5020 0.445436 GCTGCTTGAGAACCATGACG 59.555 55.00 0.00 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 136 9.691362 ACTTGGATATGATACAACAAAACAAAC 57.309 29.630 0.00 0.00 0.00 2.93
143 159 4.376340 AACAAAACAGAAAGCCAGACTG 57.624 40.909 0.00 0.00 37.62 3.51
162 190 2.278857 ACGCGCGTGATCATCCTC 60.279 61.111 37.37 0.00 0.00 3.71
168 196 1.065551 CGCGTGATCATCCTCTACACA 59.934 52.381 0.00 0.00 0.00 3.72
172 206 4.210120 GCGTGATCATCCTCTACACAATTC 59.790 45.833 0.00 0.00 0.00 2.17
185 219 4.503741 ACACAATTCCATTTCCGTTCTG 57.496 40.909 0.00 0.00 0.00 3.02
201 235 1.298953 TCTGGCTTGGGCTATCCTTT 58.701 50.000 0.00 0.00 38.73 3.11
202 236 1.064463 TCTGGCTTGGGCTATCCTTTG 60.064 52.381 0.00 0.00 38.73 2.77
203 237 0.684153 TGGCTTGGGCTATCCTTTGC 60.684 55.000 0.00 0.00 38.73 3.68
212 246 3.215151 GGCTATCCTTTGCCTTTACTCC 58.785 50.000 0.00 0.00 45.26 3.85
269 304 4.320608 AAAAATGATGAAGGCACGTGTT 57.679 36.364 18.38 3.98 0.00 3.32
270 305 5.446143 AAAAATGATGAAGGCACGTGTTA 57.554 34.783 18.38 0.00 0.00 2.41
271 306 4.419522 AAATGATGAAGGCACGTGTTAC 57.580 40.909 18.38 8.14 0.00 2.50
282 317 2.262292 GTGTTACGCACCCCGCTA 59.738 61.111 0.00 0.00 42.10 4.26
283 318 2.096442 GTGTTACGCACCCCGCTAC 61.096 63.158 0.00 0.00 42.10 3.58
284 319 2.882301 GTTACGCACCCCGCTACG 60.882 66.667 0.00 0.00 41.76 3.51
285 320 3.061231 TTACGCACCCCGCTACGA 61.061 61.111 0.00 0.00 41.76 3.43
286 321 3.340953 TTACGCACCCCGCTACGAC 62.341 63.158 0.00 0.00 41.76 4.34
290 325 3.687102 CACCCCGCTACGACCACA 61.687 66.667 0.00 0.00 0.00 4.17
326 380 1.555075 CCTCCAAAGGACGGATCTGAA 59.445 52.381 9.00 0.00 46.67 3.02
330 384 3.818773 TCCAAAGGACGGATCTGAAAAAC 59.181 43.478 9.00 0.00 0.00 2.43
331 385 3.821033 CCAAAGGACGGATCTGAAAAACT 59.179 43.478 9.00 0.00 0.00 2.66
367 421 5.790593 AGGACGCTTCTGTAAAATCTGTTA 58.209 37.500 0.00 0.00 0.00 2.41
373 427 8.784043 ACGCTTCTGTAAAATCTGTTAGAAAAT 58.216 29.630 0.00 0.00 0.00 1.82
433 494 1.588082 CAGCCACATTTCCTGCACC 59.412 57.895 0.00 0.00 0.00 5.01
434 495 1.153524 AGCCACATTTCCTGCACCA 59.846 52.632 0.00 0.00 0.00 4.17
435 496 1.181098 AGCCACATTTCCTGCACCAC 61.181 55.000 0.00 0.00 0.00 4.16
436 497 1.181098 GCCACATTTCCTGCACCACT 61.181 55.000 0.00 0.00 0.00 4.00
474 535 1.204113 CCAGAGCCAGAACCTTCCCT 61.204 60.000 0.00 0.00 0.00 4.20
475 536 0.695347 CAGAGCCAGAACCTTCCCTT 59.305 55.000 0.00 0.00 0.00 3.95
476 537 0.988063 AGAGCCAGAACCTTCCCTTC 59.012 55.000 0.00 0.00 0.00 3.46
477 538 0.034960 GAGCCAGAACCTTCCCTTCC 60.035 60.000 0.00 0.00 0.00 3.46
478 539 1.000771 GCCAGAACCTTCCCTTCCC 60.001 63.158 0.00 0.00 0.00 3.97
493 554 3.717294 CCCACCCAGAACCCTCCG 61.717 72.222 0.00 0.00 0.00 4.63
497 558 4.760047 CCCAGAACCCTCCGCACG 62.760 72.222 0.00 0.00 0.00 5.34
531 592 4.263572 CACCTTCACCCACGCCCA 62.264 66.667 0.00 0.00 0.00 5.36
533 594 4.263572 CCTTCACCCACGCCCACA 62.264 66.667 0.00 0.00 0.00 4.17
535 596 4.572571 TTCACCCACGCCCACACC 62.573 66.667 0.00 0.00 0.00 4.16
668 739 4.095782 GCAATCCTAGATCTAGCTACTCCG 59.904 50.000 22.33 8.58 31.95 4.63
701 772 2.972505 CCACACAGCCACACCGAC 60.973 66.667 0.00 0.00 0.00 4.79
758 829 2.345991 CGAAGCGGGTCCCTTTCA 59.654 61.111 17.48 0.00 0.00 2.69
769 840 1.067071 GTCCCTTTCACCACGGACTAG 60.067 57.143 0.00 0.00 41.36 2.57
794 865 2.530958 GAAGAATTCCACGGGCGGGA 62.531 60.000 0.65 0.00 39.83 5.14
812 883 2.565841 GGAGAAAATCCGGATCCACAG 58.434 52.381 19.43 0.00 38.67 3.66
894 981 4.674362 CGAGTTTCCGAATTCCAAATTCCC 60.674 45.833 0.00 0.00 0.00 3.97
912 999 1.229336 CACACCACTCCTCCCTCCT 60.229 63.158 0.00 0.00 0.00 3.69
970 1057 3.449227 GCCGCCCAAAACCCTAGC 61.449 66.667 0.00 0.00 0.00 3.42
1265 1373 3.827898 CACCGCCTCCTCGTCCTC 61.828 72.222 0.00 0.00 0.00 3.71
1668 1776 5.764192 CCTCAATTCCAAGATCTCCTTCATC 59.236 44.000 0.00 0.00 31.42 2.92
1917 2025 1.876416 GCCGTGGACAGCAAGAGTAAA 60.876 52.381 0.00 0.00 0.00 2.01
2016 2124 2.955660 TGTTCCAGGGTTCAATCACAAC 59.044 45.455 0.00 0.00 0.00 3.32
2442 2550 3.333381 TGAATCCACAAGAGAAATCCCCA 59.667 43.478 0.00 0.00 0.00 4.96
2654 2926 7.496346 TCCCACATTATCTTACTTCAAGAGT 57.504 36.000 0.00 0.00 46.37 3.24
2731 3004 5.563592 TGAACTGATTGTCCATGAGTCATT 58.436 37.500 1.86 0.00 0.00 2.57
2732 3005 6.710278 TGAACTGATTGTCCATGAGTCATTA 58.290 36.000 1.86 0.00 0.00 1.90
2733 3006 7.167535 TGAACTGATTGTCCATGAGTCATTAA 58.832 34.615 1.86 0.00 0.00 1.40
2734 3007 6.992063 ACTGATTGTCCATGAGTCATTAAC 57.008 37.500 1.86 5.35 0.00 2.01
2735 3008 6.475504 ACTGATTGTCCATGAGTCATTAACA 58.524 36.000 1.86 7.98 0.00 2.41
2736 3009 6.596888 ACTGATTGTCCATGAGTCATTAACAG 59.403 38.462 1.86 8.73 0.00 3.16
2737 3010 5.355071 TGATTGTCCATGAGTCATTAACAGC 59.645 40.000 1.86 7.51 0.00 4.40
2738 3011 3.609853 TGTCCATGAGTCATTAACAGCC 58.390 45.455 1.86 0.00 0.00 4.85
2739 3012 3.264193 TGTCCATGAGTCATTAACAGCCT 59.736 43.478 1.86 0.00 0.00 4.58
2740 3013 3.624861 GTCCATGAGTCATTAACAGCCTG 59.375 47.826 1.86 0.00 0.00 4.85
2741 3014 3.264193 TCCATGAGTCATTAACAGCCTGT 59.736 43.478 1.86 0.00 0.00 4.00
2742 3015 4.012374 CCATGAGTCATTAACAGCCTGTT 58.988 43.478 15.44 15.44 43.88 3.16
2743 3016 4.460382 CCATGAGTCATTAACAGCCTGTTT 59.540 41.667 16.40 0.00 41.45 2.83
2744 3017 5.396484 CATGAGTCATTAACAGCCTGTTTG 58.604 41.667 16.40 9.13 41.45 2.93
2745 3018 3.820467 TGAGTCATTAACAGCCTGTTTGG 59.180 43.478 16.40 5.99 41.45 3.28
2746 3019 4.072131 GAGTCATTAACAGCCTGTTTGGA 58.928 43.478 16.40 8.26 41.45 3.53
2747 3020 4.666512 AGTCATTAACAGCCTGTTTGGAT 58.333 39.130 16.40 5.30 41.45 3.41
2753 3026 3.346426 AGCCTGTTTGGATGGTGTC 57.654 52.632 0.00 0.00 38.35 3.67
2765 3038 4.806640 GGATGGTGTCCACATGAAATTT 57.193 40.909 0.00 0.00 46.96 1.82
2766 3039 5.151297 GGATGGTGTCCACATGAAATTTT 57.849 39.130 0.00 0.00 46.96 1.82
2767 3040 4.931002 GGATGGTGTCCACATGAAATTTTG 59.069 41.667 0.00 0.00 46.96 2.44
2768 3041 3.726607 TGGTGTCCACATGAAATTTTGC 58.273 40.909 0.00 0.00 0.00 3.68
2769 3042 3.066380 GGTGTCCACATGAAATTTTGCC 58.934 45.455 0.00 0.00 0.00 4.52
2770 3043 3.244181 GGTGTCCACATGAAATTTTGCCT 60.244 43.478 0.00 0.00 0.00 4.75
2771 3044 3.742369 GTGTCCACATGAAATTTTGCCTG 59.258 43.478 0.00 0.00 0.00 4.85
2772 3045 3.244146 TGTCCACATGAAATTTTGCCTGG 60.244 43.478 0.00 0.00 0.00 4.45
2773 3046 2.078392 CCACATGAAATTTTGCCTGGC 58.922 47.619 12.87 12.87 0.00 4.85
2774 3047 2.078392 CACATGAAATTTTGCCTGGCC 58.922 47.619 17.53 0.00 0.00 5.36
2775 3048 1.980036 ACATGAAATTTTGCCTGGCCT 59.020 42.857 17.53 0.00 0.00 5.19
2776 3049 2.289819 ACATGAAATTTTGCCTGGCCTG 60.290 45.455 17.53 2.54 0.00 4.85
2777 3050 1.714541 TGAAATTTTGCCTGGCCTGA 58.285 45.000 17.53 1.48 0.00 3.86
2778 3051 2.045524 TGAAATTTTGCCTGGCCTGAA 58.954 42.857 17.53 8.52 0.00 3.02
2779 3052 2.037511 TGAAATTTTGCCTGGCCTGAAG 59.962 45.455 17.53 0.00 0.00 3.02
2780 3053 0.322648 AATTTTGCCTGGCCTGAAGC 59.677 50.000 17.53 7.56 42.60 3.86
2789 3062 2.034687 GCCTGAAGCCTGCCTGAA 59.965 61.111 0.00 0.00 34.35 3.02
2790 3063 1.604593 GCCTGAAGCCTGCCTGAAA 60.605 57.895 0.00 0.00 34.35 2.69
2791 3064 1.593296 GCCTGAAGCCTGCCTGAAAG 61.593 60.000 0.00 0.00 34.35 2.62
2802 3075 3.170362 CTGAAAGGTGCCTGGGGA 58.830 61.111 0.00 0.00 0.00 4.81
2803 3076 1.001641 CTGAAAGGTGCCTGGGGAG 60.002 63.158 0.00 0.00 0.00 4.30
2804 3077 1.774217 TGAAAGGTGCCTGGGGAGT 60.774 57.895 0.00 0.00 0.00 3.85
2805 3078 1.303643 GAAAGGTGCCTGGGGAGTG 60.304 63.158 0.00 0.00 0.00 3.51
2806 3079 2.069165 GAAAGGTGCCTGGGGAGTGT 62.069 60.000 0.00 0.00 0.00 3.55
2807 3080 1.655114 AAAGGTGCCTGGGGAGTGTT 61.655 55.000 0.00 0.00 0.00 3.32
2808 3081 1.655114 AAGGTGCCTGGGGAGTGTTT 61.655 55.000 0.00 0.00 0.00 2.83
2809 3082 1.903404 GGTGCCTGGGGAGTGTTTG 60.903 63.158 0.00 0.00 0.00 2.93
2810 3083 1.903404 GTGCCTGGGGAGTGTTTGG 60.903 63.158 0.00 0.00 0.00 3.28
2811 3084 2.391130 TGCCTGGGGAGTGTTTGGT 61.391 57.895 0.00 0.00 0.00 3.67
2812 3085 1.152546 GCCTGGGGAGTGTTTGGTT 60.153 57.895 0.00 0.00 0.00 3.67
2813 3086 0.111639 GCCTGGGGAGTGTTTGGTTA 59.888 55.000 0.00 0.00 0.00 2.85
2814 3087 1.905637 CCTGGGGAGTGTTTGGTTAC 58.094 55.000 0.00 0.00 0.00 2.50
2815 3088 1.423921 CCTGGGGAGTGTTTGGTTACT 59.576 52.381 0.00 0.00 0.00 2.24
2816 3089 2.504367 CTGGGGAGTGTTTGGTTACTG 58.496 52.381 0.00 0.00 0.00 2.74
2817 3090 1.847737 TGGGGAGTGTTTGGTTACTGT 59.152 47.619 0.00 0.00 0.00 3.55
2818 3091 2.158726 TGGGGAGTGTTTGGTTACTGTC 60.159 50.000 0.00 0.00 0.00 3.51
2819 3092 2.501261 GGGAGTGTTTGGTTACTGTCC 58.499 52.381 0.00 0.00 0.00 4.02
2820 3093 2.105993 GGGAGTGTTTGGTTACTGTCCT 59.894 50.000 0.00 0.00 0.00 3.85
2821 3094 3.139077 GGAGTGTTTGGTTACTGTCCTG 58.861 50.000 0.00 0.00 0.00 3.86
2822 3095 3.181458 GGAGTGTTTGGTTACTGTCCTGA 60.181 47.826 0.00 0.00 0.00 3.86
2823 3096 4.058817 GAGTGTTTGGTTACTGTCCTGAG 58.941 47.826 0.00 0.00 0.00 3.35
2824 3097 3.709653 AGTGTTTGGTTACTGTCCTGAGA 59.290 43.478 0.00 0.00 0.00 3.27
2825 3098 4.163458 AGTGTTTGGTTACTGTCCTGAGAA 59.837 41.667 0.00 0.00 0.00 2.87
2826 3099 4.879545 GTGTTTGGTTACTGTCCTGAGAAA 59.120 41.667 0.00 0.00 0.00 2.52
2827 3100 5.007724 GTGTTTGGTTACTGTCCTGAGAAAG 59.992 44.000 0.00 0.00 33.04 2.62
2828 3101 5.123936 GTTTGGTTACTGTCCTGAGAAAGT 58.876 41.667 0.00 0.00 43.40 2.66
2829 3102 6.126997 TGTTTGGTTACTGTCCTGAGAAAGTA 60.127 38.462 0.00 0.00 38.92 2.24
2830 3103 5.723672 TGGTTACTGTCCTGAGAAAGTAG 57.276 43.478 0.00 0.00 42.56 2.57
2831 3104 4.021368 TGGTTACTGTCCTGAGAAAGTAGC 60.021 45.833 0.10 0.10 42.56 3.58
2832 3105 4.021368 GGTTACTGTCCTGAGAAAGTAGCA 60.021 45.833 8.82 0.00 42.79 3.49
2833 3106 3.951775 ACTGTCCTGAGAAAGTAGCAG 57.048 47.619 0.00 0.00 38.92 4.24
2834 3107 2.028567 ACTGTCCTGAGAAAGTAGCAGC 60.029 50.000 0.00 0.00 38.92 5.25
2835 3108 2.233431 CTGTCCTGAGAAAGTAGCAGCT 59.767 50.000 0.00 0.00 0.00 4.24
2836 3109 3.431415 TGTCCTGAGAAAGTAGCAGCTA 58.569 45.455 0.00 0.00 0.00 3.32
2837 3110 3.445450 TGTCCTGAGAAAGTAGCAGCTAG 59.555 47.826 1.02 0.00 0.00 3.42
2838 3111 2.428890 TCCTGAGAAAGTAGCAGCTAGC 59.571 50.000 6.62 6.62 46.19 3.42
2847 3120 4.871910 GCAGCTAGCCTGGCCTGG 62.872 72.222 23.89 23.89 42.03 4.45
2848 3121 3.406200 CAGCTAGCCTGGCCTGGT 61.406 66.667 27.68 17.32 37.93 4.00
2849 3122 3.406200 AGCTAGCCTGGCCTGGTG 61.406 66.667 27.68 18.88 0.00 4.17
2850 3123 4.496336 GCTAGCCTGGCCTGGTGG 62.496 72.222 27.68 18.49 0.00 4.61
2860 3133 4.850193 CCTGGTGGCCTCACAATT 57.150 55.556 3.32 0.00 45.32 2.32
2861 3134 3.056213 CCTGGTGGCCTCACAATTT 57.944 52.632 3.32 0.00 45.32 1.82
2862 3135 0.604578 CCTGGTGGCCTCACAATTTG 59.395 55.000 3.32 0.00 45.32 2.32
2863 3136 0.037975 CTGGTGGCCTCACAATTTGC 60.038 55.000 3.32 0.00 45.32 3.68
2864 3137 0.469705 TGGTGGCCTCACAATTTGCT 60.470 50.000 3.32 0.00 45.32 3.91
2865 3138 0.681175 GGTGGCCTCACAATTTGCTT 59.319 50.000 3.32 0.00 45.32 3.91
2866 3139 1.892474 GGTGGCCTCACAATTTGCTTA 59.108 47.619 3.32 0.00 45.32 3.09
2867 3140 2.094545 GGTGGCCTCACAATTTGCTTAG 60.095 50.000 3.32 0.00 45.32 2.18
2868 3141 1.545582 TGGCCTCACAATTTGCTTAGC 59.454 47.619 3.32 0.00 0.00 3.09
2869 3142 1.134995 GGCCTCACAATTTGCTTAGCC 60.135 52.381 0.29 1.12 0.00 3.93
2870 3143 1.821136 GCCTCACAATTTGCTTAGCCT 59.179 47.619 0.29 0.00 0.00 4.58
2871 3144 2.416431 GCCTCACAATTTGCTTAGCCTG 60.416 50.000 0.29 0.00 0.00 4.85
2872 3145 2.165030 CCTCACAATTTGCTTAGCCTGG 59.835 50.000 0.29 0.00 0.00 4.45
2873 3146 3.084039 CTCACAATTTGCTTAGCCTGGA 58.916 45.455 0.29 0.00 0.00 3.86
2874 3147 3.084039 TCACAATTTGCTTAGCCTGGAG 58.916 45.455 0.29 0.00 0.00 3.86
2875 3148 2.821969 CACAATTTGCTTAGCCTGGAGT 59.178 45.455 0.29 0.00 0.00 3.85
2876 3149 2.821969 ACAATTTGCTTAGCCTGGAGTG 59.178 45.455 0.29 0.00 0.00 3.51
2877 3150 1.467920 ATTTGCTTAGCCTGGAGTGC 58.532 50.000 0.29 0.00 0.00 4.40
2878 3151 0.955428 TTTGCTTAGCCTGGAGTGCG 60.955 55.000 0.29 0.00 0.00 5.34
2879 3152 1.826340 TTGCTTAGCCTGGAGTGCGA 61.826 55.000 0.29 0.00 0.00 5.10
2880 3153 1.811679 GCTTAGCCTGGAGTGCGAC 60.812 63.158 0.00 0.00 0.00 5.19
2881 3154 1.153549 CTTAGCCTGGAGTGCGACC 60.154 63.158 0.00 0.00 0.00 4.79
2882 3155 2.579684 CTTAGCCTGGAGTGCGACCC 62.580 65.000 0.00 0.00 0.00 4.46
2883 3156 3.897681 TAGCCTGGAGTGCGACCCA 62.898 63.158 0.00 0.00 0.00 4.51
2886 3159 4.767255 CTGGAGTGCGACCCAGGC 62.767 72.222 9.46 0.00 44.68 4.85
2888 3161 4.101448 GGAGTGCGACCCAGGCAT 62.101 66.667 0.00 0.00 43.19 4.40
2889 3162 2.731571 GGAGTGCGACCCAGGCATA 61.732 63.158 0.00 0.00 43.19 3.14
2890 3163 1.447643 GAGTGCGACCCAGGCATAT 59.552 57.895 0.00 0.00 43.19 1.78
2891 3164 0.179045 GAGTGCGACCCAGGCATATT 60.179 55.000 0.00 0.00 43.19 1.28
2892 3165 0.464373 AGTGCGACCCAGGCATATTG 60.464 55.000 0.00 0.00 43.19 1.90
2893 3166 1.823470 TGCGACCCAGGCATATTGC 60.823 57.895 0.00 0.00 44.08 3.56
2894 3167 1.526917 GCGACCCAGGCATATTGCT 60.527 57.895 0.00 0.00 44.28 3.91
2895 3168 1.103398 GCGACCCAGGCATATTGCTT 61.103 55.000 0.00 0.00 44.28 3.91
2896 3169 1.813862 GCGACCCAGGCATATTGCTTA 60.814 52.381 0.00 0.00 44.28 3.09
2897 3170 2.146342 CGACCCAGGCATATTGCTTAG 58.854 52.381 0.00 0.00 44.28 2.18
2898 3171 1.882623 GACCCAGGCATATTGCTTAGC 59.117 52.381 0.00 0.00 44.28 3.09
2899 3172 1.251251 CCCAGGCATATTGCTTAGCC 58.749 55.000 0.29 0.00 44.28 3.93
2903 3176 1.251251 GGCATATTGCTTAGCCTGGG 58.749 55.000 0.29 0.00 44.28 4.45
2904 3177 1.202927 GGCATATTGCTTAGCCTGGGA 60.203 52.381 0.29 0.00 44.28 4.37
2905 3178 2.157738 GCATATTGCTTAGCCTGGGAG 58.842 52.381 0.29 0.00 40.96 4.30
2906 3179 2.224621 GCATATTGCTTAGCCTGGGAGA 60.225 50.000 0.29 0.00 40.96 3.71
2907 3180 3.748668 GCATATTGCTTAGCCTGGGAGAA 60.749 47.826 0.29 0.00 40.96 2.87
2908 3181 2.725221 ATTGCTTAGCCTGGGAGAAG 57.275 50.000 0.29 0.00 0.00 2.85
2909 3182 0.035056 TTGCTTAGCCTGGGAGAAGC 60.035 55.000 14.83 14.83 43.69 3.86
2910 3183 1.522580 GCTTAGCCTGGGAGAAGCG 60.523 63.158 9.18 0.00 35.40 4.68
2911 3184 1.901085 CTTAGCCTGGGAGAAGCGT 59.099 57.895 0.00 0.00 0.00 5.07
2912 3185 0.250513 CTTAGCCTGGGAGAAGCGTT 59.749 55.000 0.00 0.00 0.00 4.84
2913 3186 0.249398 TTAGCCTGGGAGAAGCGTTC 59.751 55.000 0.00 0.00 0.00 3.95
2914 3187 0.902984 TAGCCTGGGAGAAGCGTTCA 60.903 55.000 0.00 0.00 0.00 3.18
2915 3188 1.302511 GCCTGGGAGAAGCGTTCAA 60.303 57.895 0.00 0.00 0.00 2.69
2916 3189 0.889186 GCCTGGGAGAAGCGTTCAAA 60.889 55.000 0.00 0.00 0.00 2.69
2917 3190 1.604604 CCTGGGAGAAGCGTTCAAAA 58.395 50.000 0.00 0.00 0.00 2.44
2918 3191 1.953686 CCTGGGAGAAGCGTTCAAAAA 59.046 47.619 0.00 0.00 0.00 1.94
2934 3207 2.287977 AAAAAGGACACCTGGGTAGC 57.712 50.000 0.00 0.00 32.13 3.58
2935 3208 1.446016 AAAAGGACACCTGGGTAGCT 58.554 50.000 0.00 0.00 32.13 3.32
2936 3209 0.693049 AAAGGACACCTGGGTAGCTG 59.307 55.000 0.00 0.00 32.13 4.24
2937 3210 1.842381 AAGGACACCTGGGTAGCTGC 61.842 60.000 0.00 0.00 32.13 5.25
2938 3211 2.269241 GACACCTGGGTAGCTGCC 59.731 66.667 13.24 13.24 0.00 4.85
2939 3212 2.203998 ACACCTGGGTAGCTGCCT 60.204 61.111 21.02 0.00 0.00 4.75
2940 3213 2.270205 CACCTGGGTAGCTGCCTG 59.730 66.667 21.02 13.24 0.00 4.85
2941 3214 3.011517 ACCTGGGTAGCTGCCTGG 61.012 66.667 21.02 22.57 0.00 4.45
2942 3215 3.011517 CCTGGGTAGCTGCCTGGT 61.012 66.667 21.02 0.00 0.00 4.00
2943 3216 2.270205 CTGGGTAGCTGCCTGGTG 59.730 66.667 21.02 4.84 0.00 4.17
2944 3217 3.329889 TGGGTAGCTGCCTGGTGG 61.330 66.667 21.02 0.00 0.00 4.61
2945 3218 3.330720 GGGTAGCTGCCTGGTGGT 61.331 66.667 21.02 0.00 35.27 4.16
2946 3219 1.993391 GGGTAGCTGCCTGGTGGTA 60.993 63.158 21.02 0.00 35.27 3.25
2947 3220 1.559065 GGGTAGCTGCCTGGTGGTAA 61.559 60.000 21.02 0.00 35.27 2.85
2948 3221 0.546598 GGTAGCTGCCTGGTGGTAAT 59.453 55.000 14.43 0.00 35.27 1.89
2949 3222 1.668419 GTAGCTGCCTGGTGGTAATG 58.332 55.000 0.00 0.00 35.27 1.90
2950 3223 1.209504 GTAGCTGCCTGGTGGTAATGA 59.790 52.381 0.00 0.00 35.27 2.57
2951 3224 0.254178 AGCTGCCTGGTGGTAATGAG 59.746 55.000 0.00 0.00 35.27 2.90
2952 3225 1.379642 GCTGCCTGGTGGTAATGAGC 61.380 60.000 0.00 0.00 35.27 4.26
2953 3226 0.254178 CTGCCTGGTGGTAATGAGCT 59.746 55.000 0.00 0.00 35.27 4.09
2954 3227 0.035152 TGCCTGGTGGTAATGAGCTG 60.035 55.000 0.00 0.00 35.27 4.24
2955 3228 1.379642 GCCTGGTGGTAATGAGCTGC 61.380 60.000 0.00 0.00 35.27 5.25
2956 3229 0.254178 CCTGGTGGTAATGAGCTGCT 59.746 55.000 0.00 0.00 0.00 4.24
2957 3230 1.486310 CCTGGTGGTAATGAGCTGCTA 59.514 52.381 0.15 0.00 0.00 3.49
2958 3231 2.105477 CCTGGTGGTAATGAGCTGCTAT 59.895 50.000 0.15 0.00 0.00 2.97
2959 3232 3.434167 CCTGGTGGTAATGAGCTGCTATT 60.434 47.826 0.15 5.93 0.00 1.73
2960 3233 4.202441 CTGGTGGTAATGAGCTGCTATTT 58.798 43.478 0.15 1.73 0.00 1.40
2961 3234 4.199310 TGGTGGTAATGAGCTGCTATTTC 58.801 43.478 0.15 1.65 0.00 2.17
2962 3235 3.565902 GGTGGTAATGAGCTGCTATTTCC 59.434 47.826 0.15 10.48 0.00 3.13
2963 3236 4.199310 GTGGTAATGAGCTGCTATTTCCA 58.801 43.478 17.55 17.55 33.21 3.53
2964 3237 4.640201 GTGGTAATGAGCTGCTATTTCCAA 59.360 41.667 20.45 10.41 36.11 3.53
2965 3238 4.640201 TGGTAATGAGCTGCTATTTCCAAC 59.360 41.667 18.41 9.07 32.86 3.77
2966 3239 4.884164 GGTAATGAGCTGCTATTTCCAACT 59.116 41.667 0.15 0.00 0.00 3.16
2967 3240 5.008118 GGTAATGAGCTGCTATTTCCAACTC 59.992 44.000 0.15 0.00 0.00 3.01
2968 3241 3.988976 TGAGCTGCTATTTCCAACTCT 57.011 42.857 0.15 0.00 0.00 3.24
2969 3242 4.292186 TGAGCTGCTATTTCCAACTCTT 57.708 40.909 0.15 0.00 0.00 2.85
2970 3243 4.655963 TGAGCTGCTATTTCCAACTCTTT 58.344 39.130 0.15 0.00 0.00 2.52
2971 3244 5.072741 TGAGCTGCTATTTCCAACTCTTTT 58.927 37.500 0.15 0.00 0.00 2.27
2972 3245 5.536161 TGAGCTGCTATTTCCAACTCTTTTT 59.464 36.000 0.15 0.00 0.00 1.94
2973 3246 5.776744 AGCTGCTATTTCCAACTCTTTTTG 58.223 37.500 0.00 0.00 0.00 2.44
2974 3247 5.302823 AGCTGCTATTTCCAACTCTTTTTGT 59.697 36.000 0.00 0.00 0.00 2.83
2975 3248 6.490040 AGCTGCTATTTCCAACTCTTTTTGTA 59.510 34.615 0.00 0.00 0.00 2.41
2976 3249 6.803807 GCTGCTATTTCCAACTCTTTTTGTAG 59.196 38.462 0.00 0.00 0.00 2.74
2977 3250 7.522236 GCTGCTATTTCCAACTCTTTTTGTAGT 60.522 37.037 0.00 0.00 0.00 2.73
2978 3251 8.232913 TGCTATTTCCAACTCTTTTTGTAGTT 57.767 30.769 0.00 0.00 36.38 2.24
2979 3252 9.344772 TGCTATTTCCAACTCTTTTTGTAGTTA 57.655 29.630 0.00 0.00 34.23 2.24
2980 3253 9.608617 GCTATTTCCAACTCTTTTTGTAGTTAC 57.391 33.333 0.00 0.00 34.23 2.50
2983 3256 7.562454 TTCCAACTCTTTTTGTAGTTACAGG 57.438 36.000 0.00 0.00 37.52 4.00
2984 3257 5.529800 TCCAACTCTTTTTGTAGTTACAGGC 59.470 40.000 0.00 0.00 37.52 4.85
2985 3258 5.278315 CCAACTCTTTTTGTAGTTACAGGCC 60.278 44.000 0.00 0.00 37.52 5.19
2986 3259 5.306114 ACTCTTTTTGTAGTTACAGGCCT 57.694 39.130 0.00 0.00 37.52 5.19
2987 3260 5.691896 ACTCTTTTTGTAGTTACAGGCCTT 58.308 37.500 0.00 0.00 37.52 4.35
2988 3261 5.763698 ACTCTTTTTGTAGTTACAGGCCTTC 59.236 40.000 0.00 0.00 37.52 3.46
2989 3262 5.686753 TCTTTTTGTAGTTACAGGCCTTCA 58.313 37.500 0.00 0.00 37.52 3.02
2990 3263 6.123651 TCTTTTTGTAGTTACAGGCCTTCAA 58.876 36.000 0.00 0.00 37.52 2.69
2991 3264 6.775629 TCTTTTTGTAGTTACAGGCCTTCAAT 59.224 34.615 0.00 0.00 37.52 2.57
2992 3265 5.957842 TTTGTAGTTACAGGCCTTCAATG 57.042 39.130 0.00 0.00 37.52 2.82
2993 3266 4.901197 TGTAGTTACAGGCCTTCAATGA 57.099 40.909 0.00 0.00 0.00 2.57
2994 3267 5.435686 TGTAGTTACAGGCCTTCAATGAT 57.564 39.130 0.00 0.00 0.00 2.45
2995 3268 5.185454 TGTAGTTACAGGCCTTCAATGATG 58.815 41.667 0.00 0.00 0.00 3.07
2996 3269 3.624777 AGTTACAGGCCTTCAATGATGG 58.375 45.455 0.00 10.49 0.00 3.51
2997 3270 3.010584 AGTTACAGGCCTTCAATGATGGT 59.989 43.478 0.00 0.00 30.69 3.55
2998 3271 4.227300 AGTTACAGGCCTTCAATGATGGTA 59.773 41.667 0.00 0.00 30.69 3.25
2999 3272 3.004752 ACAGGCCTTCAATGATGGTAC 57.995 47.619 0.00 9.61 30.69 3.34
3000 3273 2.578021 ACAGGCCTTCAATGATGGTACT 59.422 45.455 0.00 11.40 30.69 2.73
3001 3274 3.780294 ACAGGCCTTCAATGATGGTACTA 59.220 43.478 0.00 0.00 30.69 1.82
3002 3275 4.413520 ACAGGCCTTCAATGATGGTACTAT 59.586 41.667 0.00 0.00 30.69 2.12
3003 3276 5.606749 ACAGGCCTTCAATGATGGTACTATA 59.393 40.000 0.00 0.00 30.69 1.31
3004 3277 6.273260 ACAGGCCTTCAATGATGGTACTATAT 59.727 38.462 0.00 3.27 30.69 0.86
3005 3278 7.170965 CAGGCCTTCAATGATGGTACTATATT 58.829 38.462 0.00 0.00 30.69 1.28
3006 3279 8.321353 CAGGCCTTCAATGATGGTACTATATTA 58.679 37.037 0.00 0.00 30.69 0.98
3007 3280 9.062367 AGGCCTTCAATGATGGTACTATATTAT 57.938 33.333 15.35 0.00 30.69 1.28
3008 3281 9.686683 GGCCTTCAATGATGGTACTATATTATT 57.313 33.333 15.35 0.00 30.69 1.40
3025 3298 9.227777 CTATATTATTTTAACACTACCCCAGGC 57.772 37.037 0.00 0.00 0.00 4.85
3026 3299 2.590282 TTTTAACACTACCCCAGGCC 57.410 50.000 0.00 0.00 0.00 5.19
3027 3300 1.447099 TTTAACACTACCCCAGGCCA 58.553 50.000 5.01 0.00 0.00 5.36
3028 3301 0.988832 TTAACACTACCCCAGGCCAG 59.011 55.000 5.01 0.00 0.00 4.85
3029 3302 0.912487 TAACACTACCCCAGGCCAGG 60.912 60.000 7.34 7.34 0.00 4.45
3030 3303 2.285368 CACTACCCCAGGCCAGGA 60.285 66.667 17.38 0.00 0.00 3.86
3031 3304 2.285442 ACTACCCCAGGCCAGGAC 60.285 66.667 17.38 0.00 0.00 3.85
3032 3305 2.285368 CTACCCCAGGCCAGGACA 60.285 66.667 17.38 0.00 0.00 4.02
3033 3306 2.285368 TACCCCAGGCCAGGACAG 60.285 66.667 17.38 6.52 0.00 3.51
3036 3309 3.970410 CCCAGGCCAGGACAGCAA 61.970 66.667 17.38 0.00 0.00 3.91
3037 3310 2.674380 CCAGGCCAGGACAGCAAC 60.674 66.667 8.94 0.00 0.00 4.17
3038 3311 2.113774 CAGGCCAGGACAGCAACA 59.886 61.111 5.01 0.00 0.00 3.33
3039 3312 1.529010 CAGGCCAGGACAGCAACAA 60.529 57.895 5.01 0.00 0.00 2.83
3040 3313 1.108727 CAGGCCAGGACAGCAACAAA 61.109 55.000 5.01 0.00 0.00 2.83
3041 3314 0.396974 AGGCCAGGACAGCAACAAAA 60.397 50.000 5.01 0.00 0.00 2.44
3042 3315 0.249447 GGCCAGGACAGCAACAAAAC 60.249 55.000 0.00 0.00 0.00 2.43
3043 3316 0.459489 GCCAGGACAGCAACAAAACA 59.541 50.000 0.00 0.00 0.00 2.83
3044 3317 1.802508 GCCAGGACAGCAACAAAACAC 60.803 52.381 0.00 0.00 0.00 3.32
3045 3318 1.476085 CCAGGACAGCAACAAAACACA 59.524 47.619 0.00 0.00 0.00 3.72
3046 3319 2.101249 CCAGGACAGCAACAAAACACAT 59.899 45.455 0.00 0.00 0.00 3.21
3047 3320 3.117794 CAGGACAGCAACAAAACACATG 58.882 45.455 0.00 0.00 0.00 3.21
3048 3321 2.760092 AGGACAGCAACAAAACACATGT 59.240 40.909 0.00 0.00 0.00 3.21
3049 3322 3.951037 AGGACAGCAACAAAACACATGTA 59.049 39.130 0.00 0.00 0.00 2.29
3050 3323 4.584325 AGGACAGCAACAAAACACATGTAT 59.416 37.500 0.00 0.00 0.00 2.29
3051 3324 4.681025 GGACAGCAACAAAACACATGTATG 59.319 41.667 0.00 0.00 0.00 2.39
3052 3325 4.050553 ACAGCAACAAAACACATGTATGC 58.949 39.130 0.00 1.30 36.23 3.14
3053 3326 3.429543 CAGCAACAAAACACATGTATGCC 59.570 43.478 0.00 0.00 36.43 4.40
3054 3327 3.069300 AGCAACAAAACACATGTATGCCA 59.931 39.130 0.00 0.00 36.43 4.92
3055 3328 3.429543 GCAACAAAACACATGTATGCCAG 59.570 43.478 0.00 0.00 33.08 4.85
3056 3329 3.940209 ACAAAACACATGTATGCCAGG 57.060 42.857 0.00 0.00 0.00 4.45
3057 3330 2.029110 ACAAAACACATGTATGCCAGGC 60.029 45.455 3.66 3.66 0.00 4.85
3058 3331 1.185315 AAACACATGTATGCCAGGCC 58.815 50.000 9.64 0.00 0.00 5.19
3059 3332 0.039472 AACACATGTATGCCAGGCCA 59.961 50.000 9.64 0.00 0.00 5.36
3060 3333 0.394762 ACACATGTATGCCAGGCCAG 60.395 55.000 9.64 0.00 0.00 4.85
3061 3334 1.454479 ACATGTATGCCAGGCCAGC 60.454 57.895 9.64 8.44 0.00 4.85
3062 3335 2.196776 ATGTATGCCAGGCCAGCC 59.803 61.111 9.64 0.00 0.00 4.85
3064 3337 2.203266 GTATGCCAGGCCAGCCTC 60.203 66.667 8.61 0.00 46.28 4.70
3065 3338 2.691996 TATGCCAGGCCAGCCTCA 60.692 61.111 8.61 5.30 46.28 3.86
3066 3339 3.047807 TATGCCAGGCCAGCCTCAC 62.048 63.158 8.61 4.30 46.28 3.51
3069 3342 4.421515 CCAGGCCAGCCTCACCAG 62.422 72.222 8.61 0.00 46.28 4.00
3070 3343 4.421515 CAGGCCAGCCTCACCAGG 62.422 72.222 8.61 0.00 46.28 4.45
3079 3352 2.805897 CCTCACCAGGCACAAAACA 58.194 52.632 0.00 0.00 30.98 2.83
3080 3353 1.110442 CCTCACCAGGCACAAAACAA 58.890 50.000 0.00 0.00 30.98 2.83
3081 3354 1.688197 CCTCACCAGGCACAAAACAAT 59.312 47.619 0.00 0.00 30.98 2.71
3082 3355 2.546373 CCTCACCAGGCACAAAACAATG 60.546 50.000 0.00 0.00 30.98 2.82
3083 3356 2.361757 CTCACCAGGCACAAAACAATGA 59.638 45.455 0.00 0.00 0.00 2.57
3084 3357 2.762887 TCACCAGGCACAAAACAATGAA 59.237 40.909 0.00 0.00 0.00 2.57
3085 3358 3.125316 CACCAGGCACAAAACAATGAAG 58.875 45.455 0.00 0.00 0.00 3.02
3086 3359 2.765699 ACCAGGCACAAAACAATGAAGT 59.234 40.909 0.00 0.00 0.00 3.01
3087 3360 3.957497 ACCAGGCACAAAACAATGAAGTA 59.043 39.130 0.00 0.00 0.00 2.24
3088 3361 4.202111 ACCAGGCACAAAACAATGAAGTAC 60.202 41.667 0.00 0.00 0.00 2.73
3089 3362 4.298332 CAGGCACAAAACAATGAAGTACC 58.702 43.478 0.00 0.00 0.00 3.34
3090 3363 3.957497 AGGCACAAAACAATGAAGTACCA 59.043 39.130 0.00 0.00 0.00 3.25
3091 3364 4.037923 AGGCACAAAACAATGAAGTACCAG 59.962 41.667 0.00 0.00 0.00 4.00
3092 3365 4.298332 GCACAAAACAATGAAGTACCAGG 58.702 43.478 0.00 0.00 0.00 4.45
3093 3366 4.298332 CACAAAACAATGAAGTACCAGGC 58.702 43.478 0.00 0.00 0.00 4.85
3094 3367 4.037923 CACAAAACAATGAAGTACCAGGCT 59.962 41.667 0.00 0.00 0.00 4.58
3095 3368 4.278419 ACAAAACAATGAAGTACCAGGCTC 59.722 41.667 0.00 0.00 0.00 4.70
3096 3369 3.788227 AACAATGAAGTACCAGGCTCA 57.212 42.857 0.00 0.00 0.00 4.26
3097 3370 3.788227 ACAATGAAGTACCAGGCTCAA 57.212 42.857 0.00 0.00 0.00 3.02
3098 3371 4.098914 ACAATGAAGTACCAGGCTCAAA 57.901 40.909 0.00 0.00 0.00 2.69
3099 3372 3.821033 ACAATGAAGTACCAGGCTCAAAC 59.179 43.478 0.00 0.00 0.00 2.93
3100 3373 2.561478 TGAAGTACCAGGCTCAAACC 57.439 50.000 0.00 0.00 0.00 3.27
3101 3374 1.771854 TGAAGTACCAGGCTCAAACCA 59.228 47.619 0.00 0.00 0.00 3.67
3102 3375 2.224523 TGAAGTACCAGGCTCAAACCAG 60.225 50.000 0.00 0.00 0.00 4.00
3103 3376 0.693049 AGTACCAGGCTCAAACCAGG 59.307 55.000 0.00 0.00 42.01 4.45
3104 3377 0.960861 GTACCAGGCTCAAACCAGGC 60.961 60.000 0.00 0.00 39.97 4.85
3105 3378 1.422977 TACCAGGCTCAAACCAGGCA 61.423 55.000 0.00 0.00 39.97 4.75
3106 3379 1.531365 CCAGGCTCAAACCAGGCAA 60.531 57.895 0.00 0.00 41.49 4.52
3107 3380 1.662044 CAGGCTCAAACCAGGCAAC 59.338 57.895 0.00 0.00 41.49 4.17
3108 3381 1.531602 AGGCTCAAACCAGGCAACC 60.532 57.895 0.00 0.00 41.49 3.77
3109 3382 1.531602 GGCTCAAACCAGGCAACCT 60.532 57.895 0.00 0.00 38.83 3.50
3110 3383 1.527433 GGCTCAAACCAGGCAACCTC 61.527 60.000 0.00 0.00 38.83 3.85
3111 3384 0.538287 GCTCAAACCAGGCAACCTCT 60.538 55.000 0.00 0.00 37.17 3.69
3112 3385 1.986882 CTCAAACCAGGCAACCTCTT 58.013 50.000 0.00 0.00 37.17 2.85
3113 3386 2.310538 CTCAAACCAGGCAACCTCTTT 58.689 47.619 0.00 0.00 37.17 2.52
3114 3387 2.695147 CTCAAACCAGGCAACCTCTTTT 59.305 45.455 0.00 0.00 37.17 2.27
3115 3388 2.693074 TCAAACCAGGCAACCTCTTTTC 59.307 45.455 0.00 0.00 37.17 2.29
3116 3389 1.704641 AACCAGGCAACCTCTTTTCC 58.295 50.000 0.00 0.00 37.17 3.13
3117 3390 0.178961 ACCAGGCAACCTCTTTTCCC 60.179 55.000 0.00 0.00 37.17 3.97
3118 3391 0.178964 CCAGGCAACCTCTTTTCCCA 60.179 55.000 0.00 0.00 37.17 4.37
3119 3392 1.251251 CAGGCAACCTCTTTTCCCAG 58.749 55.000 0.00 0.00 37.17 4.45
3120 3393 0.113190 AGGCAACCTCTTTTCCCAGG 59.887 55.000 0.00 0.00 35.69 4.45
3121 3394 1.536073 GGCAACCTCTTTTCCCAGGC 61.536 60.000 0.00 0.00 32.32 4.85
3122 3395 0.827507 GCAACCTCTTTTCCCAGGCA 60.828 55.000 0.00 0.00 32.32 4.75
3123 3396 1.928868 CAACCTCTTTTCCCAGGCAT 58.071 50.000 0.00 0.00 32.32 4.40
3124 3397 1.547372 CAACCTCTTTTCCCAGGCATG 59.453 52.381 0.00 0.00 32.32 4.06
3125 3398 1.075601 ACCTCTTTTCCCAGGCATGA 58.924 50.000 0.00 0.00 32.32 3.07
3126 3399 1.428912 ACCTCTTTTCCCAGGCATGAA 59.571 47.619 0.00 0.00 32.32 2.57
3127 3400 2.097825 CCTCTTTTCCCAGGCATGAAG 58.902 52.381 0.00 0.00 0.00 3.02
3128 3401 1.475682 CTCTTTTCCCAGGCATGAAGC 59.524 52.381 0.00 0.00 44.65 3.86
3137 3410 3.455469 GCATGAAGCCCAGGCCAC 61.455 66.667 5.01 0.22 46.01 5.01
3138 3411 2.357836 CATGAAGCCCAGGCCACT 59.642 61.111 5.01 0.00 43.17 4.00
3139 3412 1.609239 CATGAAGCCCAGGCCACTA 59.391 57.895 5.01 0.00 43.17 2.74
3140 3413 0.184451 CATGAAGCCCAGGCCACTAT 59.816 55.000 5.01 0.00 43.17 2.12
3141 3414 1.421268 CATGAAGCCCAGGCCACTATA 59.579 52.381 5.01 0.00 43.17 1.31
3142 3415 1.590591 TGAAGCCCAGGCCACTATAA 58.409 50.000 5.01 0.00 43.17 0.98
3143 3416 1.211949 TGAAGCCCAGGCCACTATAAC 59.788 52.381 5.01 0.00 43.17 1.89
3144 3417 0.551396 AAGCCCAGGCCACTATAACC 59.449 55.000 5.01 0.00 43.17 2.85
3145 3418 0.623324 AGCCCAGGCCACTATAACCA 60.623 55.000 5.01 0.00 43.17 3.67
3146 3419 0.257616 GCCCAGGCCACTATAACCAA 59.742 55.000 5.01 0.00 34.56 3.67
3147 3420 1.341581 GCCCAGGCCACTATAACCAAA 60.342 52.381 5.01 0.00 34.56 3.28
3148 3421 2.375146 CCCAGGCCACTATAACCAAAC 58.625 52.381 5.01 0.00 0.00 2.93
3149 3422 2.291282 CCCAGGCCACTATAACCAAACA 60.291 50.000 5.01 0.00 0.00 2.83
3150 3423 3.016736 CCAGGCCACTATAACCAAACAG 58.983 50.000 5.01 0.00 0.00 3.16
3151 3424 3.016736 CAGGCCACTATAACCAAACAGG 58.983 50.000 5.01 0.00 45.67 4.00
3152 3425 2.916934 AGGCCACTATAACCAAACAGGA 59.083 45.455 5.01 0.00 41.22 3.86
3153 3426 3.014623 GGCCACTATAACCAAACAGGAC 58.985 50.000 0.00 0.00 41.22 3.85
3154 3427 2.676342 GCCACTATAACCAAACAGGACG 59.324 50.000 0.00 0.00 41.22 4.79
3160 3433 6.869913 CACTATAACCAAACAGGACGTAAGAA 59.130 38.462 0.00 0.00 41.22 2.52
3207 3480 9.436957 AAGAATAACGTCACTCAATTATTCAGT 57.563 29.630 14.63 3.51 42.55 3.41
3218 3491 8.960591 CACTCAATTATTCAGTAAATGGGAACT 58.039 33.333 0.00 0.00 29.86 3.01
3316 3589 7.391148 TTTATGTCCTCCTTTTAGCAATCAC 57.609 36.000 0.00 0.00 0.00 3.06
3322 3720 4.806247 CCTCCTTTTAGCAATCACGTAGAG 59.194 45.833 0.00 0.00 0.00 2.43
3342 3740 8.492748 CGTAGAGAAGAGCTCAGTAAATAGTAG 58.507 40.741 17.77 0.00 46.45 2.57
3347 3745 8.629158 AGAAGAGCTCAGTAAATAGTAGTGATG 58.371 37.037 17.77 0.00 0.00 3.07
3403 3834 6.590068 AGGATTGTCCATGAGTCATTAAGAG 58.410 40.000 1.86 0.00 39.61 2.85
3407 3838 6.857437 TGTCCATGAGTCATTAAGAGAAGA 57.143 37.500 1.86 0.00 0.00 2.87
3408 3839 6.871844 TGTCCATGAGTCATTAAGAGAAGAG 58.128 40.000 1.86 0.00 0.00 2.85
3409 3840 5.752955 GTCCATGAGTCATTAAGAGAAGAGC 59.247 44.000 1.86 0.00 0.00 4.09
3417 3848 7.209475 AGTCATTAAGAGAAGAGCTAGAATGC 58.791 38.462 0.00 0.00 0.00 3.56
3423 3854 5.743117 AGAGAAGAGCTAGAATGCATGTTT 58.257 37.500 0.00 0.00 34.99 2.83
3424 3855 5.585445 AGAGAAGAGCTAGAATGCATGTTTG 59.415 40.000 0.00 0.00 34.99 2.93
3426 3857 5.353678 AGAAGAGCTAGAATGCATGTTTGAC 59.646 40.000 0.00 0.00 34.99 3.18
3433 3864 6.038603 GCTAGAATGCATGTTTGACCAGAATA 59.961 38.462 0.00 0.00 0.00 1.75
3448 3879 9.599866 TTGACCAGAATAATGTCACTTAGTATG 57.400 33.333 0.00 0.00 38.64 2.39
3449 3880 7.710907 TGACCAGAATAATGTCACTTAGTATGC 59.289 37.037 0.00 0.00 34.28 3.14
3450 3881 6.992715 ACCAGAATAATGTCACTTAGTATGCC 59.007 38.462 0.00 0.00 0.00 4.40
3451 3882 6.992123 CCAGAATAATGTCACTTAGTATGCCA 59.008 38.462 0.00 0.00 0.00 4.92
3452 3883 7.663081 CCAGAATAATGTCACTTAGTATGCCAT 59.337 37.037 0.00 0.00 0.00 4.40
3453 3884 8.715998 CAGAATAATGTCACTTAGTATGCCATC 58.284 37.037 0.00 0.00 0.00 3.51
3454 3885 8.432013 AGAATAATGTCACTTAGTATGCCATCA 58.568 33.333 0.00 0.00 0.00 3.07
3455 3886 9.224267 GAATAATGTCACTTAGTATGCCATCAT 57.776 33.333 0.00 0.00 36.73 2.45
3470 3901 9.888878 GTATGCCATCATATATTATGACATTGC 57.111 33.333 12.22 6.21 37.49 3.56
3471 3902 7.941431 TGCCATCATATATTATGACATTGCA 57.059 32.000 8.23 6.19 0.00 4.08
3472 3903 8.528044 TGCCATCATATATTATGACATTGCAT 57.472 30.769 8.23 0.00 0.00 3.96
3473 3904 9.629878 TGCCATCATATATTATGACATTGCATA 57.370 29.630 8.23 0.00 0.00 3.14
3527 3958 6.433716 TGACATTGCAACTATTCAGGAAATGA 59.566 34.615 0.00 0.00 35.62 2.57
3597 4028 9.334693 CACTTTTAGCAATCACATAGAAAAGAC 57.665 33.333 10.28 0.00 36.43 3.01
3615 4046 9.280456 AGAAAAGACCTCAGTAAATATTAGGGA 57.720 33.333 6.25 0.00 0.00 4.20
3636 4067 7.337938 AGGGATATTGTTGCTTTTTATTTGGG 58.662 34.615 0.00 0.00 0.00 4.12
3644 4075 4.865776 TGCTTTTTATTTGGGAACTGTCG 58.134 39.130 0.00 0.00 0.00 4.35
3686 4117 0.327591 CTCTGCCCTGAAGAGCCTTT 59.672 55.000 0.00 0.00 35.13 3.11
3687 4118 0.773644 TCTGCCCTGAAGAGCCTTTT 59.226 50.000 0.00 0.00 0.00 2.27
3698 4129 3.653835 AGAGCCTTTTAATCCCTGACC 57.346 47.619 0.00 0.00 0.00 4.02
3723 4154 7.876068 CCAAAACTTATCTGTCAGTACAACCTA 59.124 37.037 0.00 0.00 34.49 3.08
3731 4162 6.822442 TCTGTCAGTACAACCTATGTTCAAA 58.178 36.000 0.00 0.00 43.63 2.69
3796 4227 8.810652 TTAAGCATATTTTCAAACTTGTGACC 57.189 30.769 0.00 0.00 0.00 4.02
3814 4245 4.154195 GTGACCGAGCAATGTTACTGATTT 59.846 41.667 0.00 0.00 0.00 2.17
3817 4248 5.699839 ACCGAGCAATGTTACTGATTTTTC 58.300 37.500 0.00 0.00 0.00 2.29
3818 4249 5.240623 ACCGAGCAATGTTACTGATTTTTCA 59.759 36.000 0.00 0.00 0.00 2.69
3819 4250 5.569059 CCGAGCAATGTTACTGATTTTTCAC 59.431 40.000 0.00 0.00 0.00 3.18
3820 4251 6.142139 CGAGCAATGTTACTGATTTTTCACA 58.858 36.000 0.00 0.00 0.00 3.58
3843 4313 9.549509 CACAATTGCAATATTTTCTTTTCATGG 57.450 29.630 13.39 0.00 0.00 3.66
3870 4340 8.317679 AGAAGTGATAACTGCTAAATCTTCACT 58.682 33.333 0.00 0.00 43.08 3.41
3899 4369 6.746120 TGTAGGAAAACTAGTCTGAACTCAC 58.254 40.000 0.00 0.00 36.92 3.51
3906 4376 1.617322 AGTCTGAACTCACGTGCCTA 58.383 50.000 11.67 0.00 0.00 3.93
3914 4384 3.896648 ACTCACGTGCCTAATGTTTTG 57.103 42.857 11.67 0.00 0.00 2.44
3918 4388 2.034053 CACGTGCCTAATGTTTTGGTGT 59.966 45.455 0.82 0.00 0.00 4.16
3936 4406 6.274157 TGGTGTTGTTGTCAAGTTTGTTAT 57.726 33.333 0.00 0.00 33.97 1.89
3945 4415 9.906660 TGTTGTCAAGTTTGTTATTGGAATATC 57.093 29.630 0.00 0.00 0.00 1.63
3946 4416 9.906660 GTTGTCAAGTTTGTTATTGGAATATCA 57.093 29.630 0.00 0.00 0.00 2.15
3971 4442 6.522625 TCTTTGGTTTTGTTGATGAAGTCA 57.477 33.333 0.00 0.00 34.25 3.41
3972 4443 7.111247 TCTTTGGTTTTGTTGATGAAGTCAT 57.889 32.000 0.00 0.00 36.54 3.06
3988 4459 6.692486 TGAAGTCATCTCCTACAGAAAACTC 58.308 40.000 0.00 0.00 33.62 3.01
3989 4460 6.267699 TGAAGTCATCTCCTACAGAAAACTCA 59.732 38.462 0.00 0.00 33.62 3.41
4009 4480 5.292101 ACTCAGTTTTCTTTCGACACTCTTG 59.708 40.000 0.00 0.00 0.00 3.02
4013 4484 3.386768 TTCTTTCGACACTCTTGGAGG 57.613 47.619 0.00 0.00 33.35 4.30
4015 4486 1.618837 CTTTCGACACTCTTGGAGGGA 59.381 52.381 3.66 0.00 34.53 4.20
4166 4637 0.972134 CTCCAGCTGTCAACTCCTCA 59.028 55.000 13.81 0.00 0.00 3.86
4208 4679 3.052082 CCAACACCAGCTCCTGCG 61.052 66.667 0.00 0.00 45.42 5.18
4454 4925 7.040409 AGGATATTTGTTGTTGTTCTCCTTGAC 60.040 37.037 0.00 0.00 0.00 3.18
4460 4931 2.285977 GTTGTTCTCCTTGACGGTGTT 58.714 47.619 0.00 0.00 0.00 3.32
4542 5013 4.480537 ACTAACCAATAATCATGGGGGTCA 59.519 41.667 0.00 0.00 42.48 4.02
4549 5020 0.466189 ATCATGGGGGTCAATGCGTC 60.466 55.000 0.00 0.00 0.00 5.19
4573 5044 2.057137 TGGTTCTCAAGCAGCTTTGT 57.943 45.000 4.38 0.00 34.36 2.83
4598 5070 1.951130 CGACGAATCTGATGGCCGG 60.951 63.158 0.00 0.00 0.00 6.13
4738 5210 1.943340 GGTTTAGGCTATGAGTGCAGC 59.057 52.381 0.00 0.00 37.05 5.25
4879 5431 9.244799 CTGAACATATATAGTTGCGACAAACTA 57.755 33.333 6.90 1.69 44.52 2.24
4887 5439 3.058914 AGTTGCGACAAACTAGTTCATGC 60.059 43.478 8.95 11.19 38.62 4.06
4895 5447 4.163552 CAAACTAGTTCATGCGTCGTCTA 58.836 43.478 8.95 0.00 0.00 2.59
4898 5450 2.209838 AGTTCATGCGTCGTCTATGG 57.790 50.000 0.00 0.00 0.00 2.74
4924 5476 1.509703 GACCTCTGGTTGACGGAAAC 58.490 55.000 0.00 0.00 35.25 2.78
5029 5637 2.316119 CAACCAGCTTGCTAACGAAC 57.684 50.000 0.00 0.00 0.00 3.95
5031 5639 2.185004 ACCAGCTTGCTAACGAACAT 57.815 45.000 0.00 0.00 0.00 2.71
5032 5640 2.504367 ACCAGCTTGCTAACGAACATT 58.496 42.857 0.00 0.00 0.00 2.71
5037 5645 2.351738 GCTTGCTAACGAACATTGGCTT 60.352 45.455 0.00 0.00 37.01 4.35
5038 5646 3.492313 CTTGCTAACGAACATTGGCTTC 58.508 45.455 0.00 0.00 37.01 3.86
5065 5673 4.972440 GCAAAACATCAGTTCAGTTCTGTC 59.028 41.667 0.00 0.00 36.84 3.51
5066 5674 5.514279 CAAAACATCAGTTCAGTTCTGTCC 58.486 41.667 0.00 0.00 36.84 4.02
5067 5675 4.422073 AACATCAGTTCAGTTCTGTCCA 57.578 40.909 0.00 0.00 30.46 4.02
5068 5676 4.000331 ACATCAGTTCAGTTCTGTCCAG 58.000 45.455 0.00 0.00 34.86 3.86
5069 5677 3.643320 ACATCAGTTCAGTTCTGTCCAGA 59.357 43.478 0.00 0.00 34.86 3.86
5070 5678 4.101585 ACATCAGTTCAGTTCTGTCCAGAA 59.898 41.667 5.64 5.64 44.47 3.02
5080 5688 4.963318 TTCTGTCCAGAACTTCAGTCAT 57.037 40.909 5.64 0.00 42.06 3.06
5081 5689 4.527509 TCTGTCCAGAACTTCAGTCATC 57.472 45.455 0.00 0.00 33.91 2.92
5082 5690 3.259374 TCTGTCCAGAACTTCAGTCATCC 59.741 47.826 0.00 0.00 33.91 3.51
5083 5691 2.303022 TGTCCAGAACTTCAGTCATCCC 59.697 50.000 0.00 0.00 0.00 3.85
5084 5692 2.569404 GTCCAGAACTTCAGTCATCCCT 59.431 50.000 0.00 0.00 0.00 4.20
5085 5693 2.568956 TCCAGAACTTCAGTCATCCCTG 59.431 50.000 0.00 0.00 0.00 4.45
5086 5694 2.354259 CAGAACTTCAGTCATCCCTGC 58.646 52.381 0.00 0.00 32.32 4.85
5087 5695 1.980765 AGAACTTCAGTCATCCCTGCA 59.019 47.619 0.00 0.00 32.32 4.41
5088 5696 2.575279 AGAACTTCAGTCATCCCTGCAT 59.425 45.455 0.00 0.00 32.32 3.96
5089 5697 2.706339 ACTTCAGTCATCCCTGCATC 57.294 50.000 0.00 0.00 32.32 3.91
5090 5698 1.211457 ACTTCAGTCATCCCTGCATCC 59.789 52.381 0.00 0.00 32.32 3.51
5091 5699 1.489649 CTTCAGTCATCCCTGCATCCT 59.510 52.381 0.00 0.00 32.32 3.24
5092 5700 1.588239 TCAGTCATCCCTGCATCCTT 58.412 50.000 0.00 0.00 32.32 3.36
5093 5701 1.487976 TCAGTCATCCCTGCATCCTTC 59.512 52.381 0.00 0.00 32.32 3.46
5094 5702 0.467384 AGTCATCCCTGCATCCTTCG 59.533 55.000 0.00 0.00 0.00 3.79
5095 5703 1.146930 TCATCCCTGCATCCTTCGC 59.853 57.895 0.00 0.00 0.00 4.70
5096 5704 1.153107 CATCCCTGCATCCTTCGCA 60.153 57.895 0.00 0.00 37.88 5.10
5097 5705 0.536687 CATCCCTGCATCCTTCGCAT 60.537 55.000 0.00 0.00 39.02 4.73
5098 5706 0.184451 ATCCCTGCATCCTTCGCATT 59.816 50.000 0.00 0.00 39.02 3.56
5099 5707 0.034186 TCCCTGCATCCTTCGCATTT 60.034 50.000 0.00 0.00 39.02 2.32
5100 5708 0.819582 CCCTGCATCCTTCGCATTTT 59.180 50.000 0.00 0.00 39.02 1.82
5101 5709 1.205417 CCCTGCATCCTTCGCATTTTT 59.795 47.619 0.00 0.00 39.02 1.94
5102 5710 2.426738 CCCTGCATCCTTCGCATTTTTA 59.573 45.455 0.00 0.00 39.02 1.52
5103 5711 3.068590 CCCTGCATCCTTCGCATTTTTAT 59.931 43.478 0.00 0.00 39.02 1.40
5104 5712 4.441913 CCCTGCATCCTTCGCATTTTTATT 60.442 41.667 0.00 0.00 39.02 1.40
5105 5713 5.111293 CCTGCATCCTTCGCATTTTTATTT 58.889 37.500 0.00 0.00 39.02 1.40
5106 5714 5.232838 CCTGCATCCTTCGCATTTTTATTTC 59.767 40.000 0.00 0.00 39.02 2.17
5107 5715 5.964758 TGCATCCTTCGCATTTTTATTTCT 58.035 33.333 0.00 0.00 33.55 2.52
5108 5716 6.035843 TGCATCCTTCGCATTTTTATTTCTC 58.964 36.000 0.00 0.00 33.55 2.87
5109 5717 5.172053 GCATCCTTCGCATTTTTATTTCTCG 59.828 40.000 0.00 0.00 0.00 4.04
5110 5718 6.486248 CATCCTTCGCATTTTTATTTCTCGA 58.514 36.000 0.00 0.00 0.00 4.04
5111 5719 5.864986 TCCTTCGCATTTTTATTTCTCGAC 58.135 37.500 0.00 0.00 0.00 4.20
5112 5720 5.410132 TCCTTCGCATTTTTATTTCTCGACA 59.590 36.000 0.00 0.00 0.00 4.35
5113 5721 6.072948 TCCTTCGCATTTTTATTTCTCGACAA 60.073 34.615 0.00 0.00 0.00 3.18
5114 5722 6.580791 CCTTCGCATTTTTATTTCTCGACAAA 59.419 34.615 0.00 0.00 0.00 2.83
5115 5723 7.273381 CCTTCGCATTTTTATTTCTCGACAAAT 59.727 33.333 4.06 4.06 0.00 2.32
5116 5724 8.514136 TTCGCATTTTTATTTCTCGACAAATT 57.486 26.923 3.92 0.00 0.00 1.82
5117 5725 8.157159 TCGCATTTTTATTTCTCGACAAATTC 57.843 30.769 3.92 0.00 0.00 2.17
5118 5726 7.272515 TCGCATTTTTATTTCTCGACAAATTCC 59.727 33.333 3.92 0.00 0.00 3.01
5119 5727 7.273381 CGCATTTTTATTTCTCGACAAATTCCT 59.727 33.333 3.92 0.00 0.00 3.36
5120 5728 8.375465 GCATTTTTATTTCTCGACAAATTCCTG 58.625 33.333 3.92 0.00 0.00 3.86
5121 5729 9.624697 CATTTTTATTTCTCGACAAATTCCTGA 57.375 29.630 3.92 0.00 0.00 3.86
5125 5733 9.840427 TTTATTTCTCGACAAATTCCTGAATTC 57.160 29.630 3.92 0.00 39.88 2.17
5126 5734 5.530519 TTCTCGACAAATTCCTGAATTCG 57.469 39.130 5.64 5.98 39.88 3.34
5127 5735 3.370978 TCTCGACAAATTCCTGAATTCGC 59.629 43.478 5.64 0.00 39.88 4.70
5128 5736 3.070748 TCGACAAATTCCTGAATTCGCA 58.929 40.909 5.64 0.00 39.88 5.10
5131 5739 4.545610 GACAAATTCCTGAATTCGCACAA 58.454 39.130 5.64 0.00 39.88 3.33
5134 5742 2.270352 TTCCTGAATTCGCACAACCT 57.730 45.000 0.04 0.00 0.00 3.50
5139 5747 5.116180 TCCTGAATTCGCACAACCTATAAG 58.884 41.667 0.04 0.00 0.00 1.73
5165 5773 6.511767 CGCAGCCGATATAGAGTTTGAATTTT 60.512 38.462 0.00 0.00 36.29 1.82
5167 5775 7.798982 GCAGCCGATATAGAGTTTGAATTTTAC 59.201 37.037 0.00 0.00 0.00 2.01
5201 5809 3.255395 ACGTTGCACATGAAAATCCATCA 59.745 39.130 0.00 0.00 0.00 3.07
5234 6772 7.134815 CGGATTTGCAGTCTCTTATAAAATGG 58.865 38.462 0.00 0.00 0.00 3.16
5238 6778 3.570125 GCAGTCTCTTATAAAATGGCCCC 59.430 47.826 0.00 0.00 0.00 5.80
5239 6779 4.689983 GCAGTCTCTTATAAAATGGCCCCT 60.690 45.833 0.00 0.00 0.00 4.79
5240 6780 4.823989 CAGTCTCTTATAAAATGGCCCCTG 59.176 45.833 0.00 0.00 0.00 4.45
5241 6781 4.478686 AGTCTCTTATAAAATGGCCCCTGT 59.521 41.667 0.00 0.00 0.00 4.00
5242 6782 5.670361 AGTCTCTTATAAAATGGCCCCTGTA 59.330 40.000 0.00 0.00 0.00 2.74
5331 6871 2.375766 GGCGCTTCACACTGTCTCG 61.376 63.158 7.64 0.00 0.00 4.04
5363 6903 4.012721 ACCCTTCTCCCTCCCGCT 62.013 66.667 0.00 0.00 0.00 5.52
5523 7063 2.881352 CCGTCGGAGAAGAAGCGC 60.881 66.667 4.91 0.00 38.59 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 115 7.430793 GCTTTCTGTTTTGTTTGTTTGTTTTGT 59.569 29.630 0.00 0.00 0.00 2.83
120 136 4.563976 CAGTCTGGCTTTCTGTTTTGTTTG 59.436 41.667 0.00 0.00 0.00 2.93
143 159 3.330853 GGATGATCACGCGCGTCC 61.331 66.667 35.61 25.94 33.44 4.79
162 190 5.391950 CCAGAACGGAAATGGAATTGTGTAG 60.392 44.000 0.00 0.00 36.10 2.74
168 196 2.807676 AGCCAGAACGGAAATGGAATT 58.192 42.857 2.80 0.00 36.09 2.17
172 206 0.527565 CCAAGCCAGAACGGAAATGG 59.472 55.000 0.00 0.00 36.56 3.16
185 219 1.395045 GGCAAAGGATAGCCCAAGCC 61.395 60.000 8.24 8.24 45.18 4.35
201 235 1.271379 GCAAGACCAGGAGTAAAGGCA 60.271 52.381 0.00 0.00 0.00 4.75
202 236 1.003696 AGCAAGACCAGGAGTAAAGGC 59.996 52.381 0.00 0.00 0.00 4.35
203 237 3.008485 AGAAGCAAGACCAGGAGTAAAGG 59.992 47.826 0.00 0.00 0.00 3.11
212 246 3.514777 TGCGTAGAAGCAAGACCAG 57.485 52.632 0.00 0.00 45.06 4.00
273 308 2.901051 GATGTGGTCGTAGCGGGGTG 62.901 65.000 0.00 0.00 0.00 4.61
274 309 2.682494 ATGTGGTCGTAGCGGGGT 60.682 61.111 0.00 0.00 0.00 4.95
275 310 2.106332 GATGTGGTCGTAGCGGGG 59.894 66.667 0.00 0.00 0.00 5.73
276 311 2.106332 GGATGTGGTCGTAGCGGG 59.894 66.667 0.00 0.00 0.00 6.13
277 312 1.226974 CAGGATGTGGTCGTAGCGG 60.227 63.158 0.00 0.00 0.00 5.52
278 313 0.385751 ATCAGGATGTGGTCGTAGCG 59.614 55.000 0.00 0.00 37.40 4.26
279 314 1.269831 GGATCAGGATGTGGTCGTAGC 60.270 57.143 0.00 0.00 37.13 3.58
280 315 2.311463 AGGATCAGGATGTGGTCGTAG 58.689 52.381 0.00 0.00 37.13 3.51
281 316 2.454336 AGGATCAGGATGTGGTCGTA 57.546 50.000 0.00 0.00 37.13 3.43
282 317 2.311463 CTAGGATCAGGATGTGGTCGT 58.689 52.381 0.00 0.00 37.13 4.34
283 318 2.311463 ACTAGGATCAGGATGTGGTCG 58.689 52.381 0.00 0.00 37.13 4.79
284 319 3.257127 GCTACTAGGATCAGGATGTGGTC 59.743 52.174 0.00 0.00 37.40 4.02
285 320 3.235200 GCTACTAGGATCAGGATGTGGT 58.765 50.000 0.00 0.00 37.40 4.16
286 321 2.564947 GGCTACTAGGATCAGGATGTGG 59.435 54.545 0.00 0.00 37.40 4.17
287 322 3.505386 AGGCTACTAGGATCAGGATGTG 58.495 50.000 0.00 0.00 37.40 3.21
288 323 3.501385 GGAGGCTACTAGGATCAGGATGT 60.501 52.174 0.00 0.00 37.40 3.06
289 324 3.096092 GGAGGCTACTAGGATCAGGATG 58.904 54.545 0.00 0.00 37.54 3.51
290 325 2.724672 TGGAGGCTACTAGGATCAGGAT 59.275 50.000 0.00 0.00 0.00 3.24
326 380 3.808174 GTCCTCTCGTGTTTGCTAGTTTT 59.192 43.478 0.00 0.00 0.00 2.43
330 384 1.618861 CGTCCTCTCGTGTTTGCTAG 58.381 55.000 0.00 0.00 0.00 3.42
331 385 0.388134 GCGTCCTCTCGTGTTTGCTA 60.388 55.000 0.00 0.00 0.00 3.49
373 427 8.100164 TCTGATGAATGAATGTGTACTTTACCA 58.900 33.333 0.00 0.00 0.00 3.25
379 433 9.896645 AGTAATTCTGATGAATGAATGTGTACT 57.103 29.630 0.00 0.00 41.62 2.73
433 494 0.034059 GGTGGGTCAGTGAGTGAGTG 59.966 60.000 0.00 0.00 35.13 3.51
434 495 0.398522 TGGTGGGTCAGTGAGTGAGT 60.399 55.000 0.00 0.00 35.13 3.41
435 496 0.758734 TTGGTGGGTCAGTGAGTGAG 59.241 55.000 0.00 0.00 35.13 3.51
436 497 0.468226 GTTGGTGGGTCAGTGAGTGA 59.532 55.000 0.00 0.00 0.00 3.41
474 535 1.850755 GGAGGGTTCTGGGTGGGAA 60.851 63.158 0.00 0.00 0.00 3.97
475 536 2.204090 GGAGGGTTCTGGGTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
476 537 3.717294 CGGAGGGTTCTGGGTGGG 61.717 72.222 0.00 0.00 0.00 4.61
477 538 4.410400 GCGGAGGGTTCTGGGTGG 62.410 72.222 0.00 0.00 0.00 4.61
478 539 3.636231 TGCGGAGGGTTCTGGGTG 61.636 66.667 0.00 0.00 0.00 4.61
493 554 1.899534 TGGGGTAAAAGTGGCGTGC 60.900 57.895 0.00 0.00 0.00 5.34
497 558 1.244816 GTGAGTGGGGTAAAAGTGGC 58.755 55.000 0.00 0.00 0.00 5.01
531 592 4.935495 CGCTGTGCCCAGTGGTGT 62.935 66.667 8.74 0.00 43.92 4.16
678 749 3.969802 GTGGCTGTGTGGCTGTGC 61.970 66.667 0.00 0.00 42.34 4.57
686 757 4.602259 CGGTCGGTGTGGCTGTGT 62.602 66.667 0.00 0.00 0.00 3.72
739 810 4.717313 AAAGGGACCCGCTTCGCC 62.717 66.667 4.40 0.00 35.61 5.54
758 829 0.702902 TTCTCCCTCTAGTCCGTGGT 59.297 55.000 0.00 0.00 0.00 4.16
769 840 1.134371 CCCGTGGAATTCTTCTCCCTC 60.134 57.143 5.23 0.00 31.32 4.30
794 865 1.743772 CGCTGTGGATCCGGATTTTCT 60.744 52.381 20.22 0.00 0.00 2.52
894 981 0.838122 AAGGAGGGAGGAGTGGTGTG 60.838 60.000 0.00 0.00 0.00 3.82
970 1057 0.247736 CGAGGAGGGTTCAGTTCAGG 59.752 60.000 0.00 0.00 0.00 3.86
1572 1680 2.510238 CGCTTCTTCCTCTGCCGG 60.510 66.667 0.00 0.00 0.00 6.13
1668 1776 2.324330 TGTTGCATTCTCGGCCACG 61.324 57.895 2.24 0.00 42.74 4.94
1917 2025 3.245052 CCTTCTTGGTCTTGGTCTTGGAT 60.245 47.826 0.00 0.00 0.00 3.41
2016 2124 2.225117 ACTTCCCCCACTCAATCCAAAG 60.225 50.000 0.00 0.00 0.00 2.77
2442 2550 0.179045 GCGGCAATGGTCCATCTACT 60.179 55.000 4.39 0.00 0.00 2.57
2654 2926 9.851686 AATATTATTCTCTGTAGCATTTGGTCA 57.148 29.630 0.00 0.00 0.00 4.02
2703 2976 4.272489 TCATGGACAATCAGTTCAATCCC 58.728 43.478 0.00 0.00 39.75 3.85
2731 3004 2.158534 ACACCATCCAAACAGGCTGTTA 60.159 45.455 31.34 17.75 40.14 2.41
2732 3005 1.331214 CACCATCCAAACAGGCTGTT 58.669 50.000 26.54 26.54 43.41 3.16
2733 3006 0.185901 ACACCATCCAAACAGGCTGT 59.814 50.000 15.88 15.88 37.29 4.40
2734 3007 0.883833 GACACCATCCAAACAGGCTG 59.116 55.000 14.16 14.16 37.29 4.85
2735 3008 3.346426 GACACCATCCAAACAGGCT 57.654 52.632 0.00 0.00 37.29 4.58
2745 3018 4.389687 GCAAAATTTCATGTGGACACCATC 59.610 41.667 0.00 0.00 35.28 3.51
2746 3019 4.317488 GCAAAATTTCATGTGGACACCAT 58.683 39.130 0.00 0.00 35.28 3.55
2747 3020 3.494048 GGCAAAATTTCATGTGGACACCA 60.494 43.478 0.00 0.00 0.00 4.17
2748 3021 3.066380 GGCAAAATTTCATGTGGACACC 58.934 45.455 0.00 0.00 0.00 4.16
2749 3022 3.742369 CAGGCAAAATTTCATGTGGACAC 59.258 43.478 0.00 0.00 0.00 3.67
2750 3023 3.244146 CCAGGCAAAATTTCATGTGGACA 60.244 43.478 0.00 0.00 0.00 4.02
2751 3024 3.328505 CCAGGCAAAATTTCATGTGGAC 58.671 45.455 0.00 0.00 0.00 4.02
2752 3025 2.289569 GCCAGGCAAAATTTCATGTGGA 60.290 45.455 6.55 0.00 0.00 4.02
2753 3026 2.078392 GCCAGGCAAAATTTCATGTGG 58.922 47.619 6.55 0.00 0.00 4.17
2754 3027 2.078392 GGCCAGGCAAAATTTCATGTG 58.922 47.619 15.19 0.00 0.00 3.21
2755 3028 1.980036 AGGCCAGGCAAAATTTCATGT 59.020 42.857 15.19 0.00 0.00 3.21
2756 3029 2.027929 TCAGGCCAGGCAAAATTTCATG 60.028 45.455 15.19 0.00 0.00 3.07
2757 3030 2.259012 TCAGGCCAGGCAAAATTTCAT 58.741 42.857 15.19 0.00 0.00 2.57
2758 3031 1.714541 TCAGGCCAGGCAAAATTTCA 58.285 45.000 15.19 0.00 0.00 2.69
2759 3032 2.691927 CTTCAGGCCAGGCAAAATTTC 58.308 47.619 15.19 0.00 0.00 2.17
2760 3033 1.271001 GCTTCAGGCCAGGCAAAATTT 60.271 47.619 15.19 0.00 34.27 1.82
2761 3034 0.322648 GCTTCAGGCCAGGCAAAATT 59.677 50.000 15.19 0.00 34.27 1.82
2762 3035 1.977685 GCTTCAGGCCAGGCAAAAT 59.022 52.632 15.19 0.00 34.27 1.82
2763 3036 3.458653 GCTTCAGGCCAGGCAAAA 58.541 55.556 15.19 2.89 34.27 2.44
2772 3045 1.593296 CTTTCAGGCAGGCTTCAGGC 61.593 60.000 0.00 0.00 41.43 4.85
2773 3046 0.964358 CCTTTCAGGCAGGCTTCAGG 60.964 60.000 0.00 0.00 0.00 3.86
2774 3047 0.251077 ACCTTTCAGGCAGGCTTCAG 60.251 55.000 0.00 0.00 39.63 3.02
2775 3048 0.538057 CACCTTTCAGGCAGGCTTCA 60.538 55.000 0.00 0.00 39.63 3.02
2776 3049 1.871126 GCACCTTTCAGGCAGGCTTC 61.871 60.000 0.00 0.00 39.63 3.86
2777 3050 1.905354 GCACCTTTCAGGCAGGCTT 60.905 57.895 0.00 0.00 39.63 4.35
2778 3051 2.282745 GCACCTTTCAGGCAGGCT 60.283 61.111 0.00 0.00 39.63 4.58
2779 3052 3.376918 GGCACCTTTCAGGCAGGC 61.377 66.667 0.00 0.00 39.63 4.85
2780 3053 1.975407 CAGGCACCTTTCAGGCAGG 60.975 63.158 0.00 0.00 39.63 4.85
2781 3054 1.975407 CCAGGCACCTTTCAGGCAG 60.975 63.158 0.00 0.00 39.63 4.85
2782 3055 2.115910 CCAGGCACCTTTCAGGCA 59.884 61.111 0.00 0.00 39.63 4.75
2783 3056 2.677875 CCCAGGCACCTTTCAGGC 60.678 66.667 0.00 0.00 39.63 4.85
2784 3057 2.036256 CCCCAGGCACCTTTCAGG 59.964 66.667 0.00 0.00 42.49 3.86
2785 3058 1.001641 CTCCCCAGGCACCTTTCAG 60.002 63.158 0.00 0.00 0.00 3.02
2786 3059 1.774217 ACTCCCCAGGCACCTTTCA 60.774 57.895 0.00 0.00 0.00 2.69
2787 3060 1.303643 CACTCCCCAGGCACCTTTC 60.304 63.158 0.00 0.00 0.00 2.62
2788 3061 1.655114 AACACTCCCCAGGCACCTTT 61.655 55.000 0.00 0.00 0.00 3.11
2789 3062 1.655114 AAACACTCCCCAGGCACCTT 61.655 55.000 0.00 0.00 0.00 3.50
2790 3063 2.084930 AAACACTCCCCAGGCACCT 61.085 57.895 0.00 0.00 0.00 4.00
2791 3064 1.903404 CAAACACTCCCCAGGCACC 60.903 63.158 0.00 0.00 0.00 5.01
2792 3065 1.903404 CCAAACACTCCCCAGGCAC 60.903 63.158 0.00 0.00 0.00 5.01
2793 3066 1.943730 AACCAAACACTCCCCAGGCA 61.944 55.000 0.00 0.00 0.00 4.75
2794 3067 0.111639 TAACCAAACACTCCCCAGGC 59.888 55.000 0.00 0.00 0.00 4.85
2795 3068 1.423921 AGTAACCAAACACTCCCCAGG 59.576 52.381 0.00 0.00 0.00 4.45
2796 3069 2.158667 ACAGTAACCAAACACTCCCCAG 60.159 50.000 0.00 0.00 0.00 4.45
2797 3070 1.847737 ACAGTAACCAAACACTCCCCA 59.152 47.619 0.00 0.00 0.00 4.96
2798 3071 2.501261 GACAGTAACCAAACACTCCCC 58.499 52.381 0.00 0.00 0.00 4.81
2799 3072 2.105993 AGGACAGTAACCAAACACTCCC 59.894 50.000 0.00 0.00 0.00 4.30
2800 3073 3.139077 CAGGACAGTAACCAAACACTCC 58.861 50.000 0.00 0.00 0.00 3.85
2801 3074 4.058817 CTCAGGACAGTAACCAAACACTC 58.941 47.826 0.00 0.00 0.00 3.51
2802 3075 3.709653 TCTCAGGACAGTAACCAAACACT 59.290 43.478 0.00 0.00 0.00 3.55
2803 3076 4.067972 TCTCAGGACAGTAACCAAACAC 57.932 45.455 0.00 0.00 0.00 3.32
2804 3077 4.764050 TTCTCAGGACAGTAACCAAACA 57.236 40.909 0.00 0.00 0.00 2.83
2805 3078 5.123936 ACTTTCTCAGGACAGTAACCAAAC 58.876 41.667 0.00 0.00 31.53 2.93
2806 3079 5.367945 ACTTTCTCAGGACAGTAACCAAA 57.632 39.130 0.00 0.00 31.53 3.28
2807 3080 5.510861 GCTACTTTCTCAGGACAGTAACCAA 60.511 44.000 0.00 0.00 35.25 3.67
2808 3081 4.021368 GCTACTTTCTCAGGACAGTAACCA 60.021 45.833 0.00 0.00 35.25 3.67
2809 3082 4.021368 TGCTACTTTCTCAGGACAGTAACC 60.021 45.833 0.00 0.00 35.25 2.85
2810 3083 5.135508 TGCTACTTTCTCAGGACAGTAAC 57.864 43.478 0.00 0.00 35.25 2.50
2811 3084 4.322049 GCTGCTACTTTCTCAGGACAGTAA 60.322 45.833 0.00 0.00 35.25 2.24
2812 3085 3.193691 GCTGCTACTTTCTCAGGACAGTA 59.806 47.826 0.00 0.00 34.70 2.74
2813 3086 2.028567 GCTGCTACTTTCTCAGGACAGT 60.029 50.000 0.00 0.00 36.57 3.55
2814 3087 2.233431 AGCTGCTACTTTCTCAGGACAG 59.767 50.000 0.00 0.00 0.00 3.51
2815 3088 2.251818 AGCTGCTACTTTCTCAGGACA 58.748 47.619 0.00 0.00 0.00 4.02
2816 3089 3.736740 GCTAGCTGCTACTTTCTCAGGAC 60.737 52.174 7.70 0.00 38.95 3.85
2817 3090 2.428890 GCTAGCTGCTACTTTCTCAGGA 59.571 50.000 7.70 0.00 38.95 3.86
2818 3091 2.482839 GGCTAGCTGCTACTTTCTCAGG 60.483 54.545 15.72 0.00 42.39 3.86
2819 3092 2.430332 AGGCTAGCTGCTACTTTCTCAG 59.570 50.000 15.72 0.00 42.39 3.35
2820 3093 2.167281 CAGGCTAGCTGCTACTTTCTCA 59.833 50.000 15.72 0.00 42.39 3.27
2821 3094 2.482839 CCAGGCTAGCTGCTACTTTCTC 60.483 54.545 15.72 0.00 42.39 2.87
2822 3095 1.484240 CCAGGCTAGCTGCTACTTTCT 59.516 52.381 15.72 0.00 42.39 2.52
2823 3096 1.946745 CCAGGCTAGCTGCTACTTTC 58.053 55.000 15.72 0.00 42.39 2.62
2824 3097 0.107459 GCCAGGCTAGCTGCTACTTT 60.107 55.000 15.72 0.00 42.39 2.66
2825 3098 1.524482 GCCAGGCTAGCTGCTACTT 59.476 57.895 15.72 0.00 42.39 2.24
2826 3099 2.439104 GGCCAGGCTAGCTGCTACT 61.439 63.158 15.72 0.00 42.39 2.57
2827 3100 2.110006 GGCCAGGCTAGCTGCTAC 59.890 66.667 15.72 3.22 42.39 3.58
2828 3101 2.041508 AGGCCAGGCTAGCTGCTA 60.042 61.111 15.72 9.34 42.39 3.49
2829 3102 3.795041 CAGGCCAGGCTAGCTGCT 61.795 66.667 15.72 7.57 42.39 4.24
2830 3103 4.871910 CCAGGCCAGGCTAGCTGC 62.872 72.222 15.72 14.48 41.94 5.25
2831 3104 3.406200 ACCAGGCCAGGCTAGCTG 61.406 66.667 15.37 10.30 0.00 4.24
2832 3105 3.406200 CACCAGGCCAGGCTAGCT 61.406 66.667 15.37 0.00 0.00 3.32
2833 3106 4.496336 CCACCAGGCCAGGCTAGC 62.496 72.222 15.37 6.04 0.00 3.42
2843 3116 0.604578 CAAATTGTGAGGCCACCAGG 59.395 55.000 5.01 0.00 42.53 4.45
2844 3117 0.037975 GCAAATTGTGAGGCCACCAG 60.038 55.000 5.01 0.00 42.53 4.00
2845 3118 0.469705 AGCAAATTGTGAGGCCACCA 60.470 50.000 5.01 0.00 42.53 4.17
2846 3119 0.681175 AAGCAAATTGTGAGGCCACC 59.319 50.000 5.01 0.00 42.53 4.61
2847 3120 2.672195 GCTAAGCAAATTGTGAGGCCAC 60.672 50.000 5.01 0.00 43.46 5.01
2848 3121 1.545582 GCTAAGCAAATTGTGAGGCCA 59.454 47.619 5.01 0.00 0.00 5.36
2849 3122 1.134995 GGCTAAGCAAATTGTGAGGCC 60.135 52.381 0.00 0.00 0.00 5.19
2850 3123 1.821136 AGGCTAAGCAAATTGTGAGGC 59.179 47.619 8.58 8.58 0.00 4.70
2851 3124 2.165030 CCAGGCTAAGCAAATTGTGAGG 59.835 50.000 0.00 0.00 0.00 3.86
2852 3125 3.084039 TCCAGGCTAAGCAAATTGTGAG 58.916 45.455 0.00 0.00 0.00 3.51
2853 3126 3.084039 CTCCAGGCTAAGCAAATTGTGA 58.916 45.455 0.00 0.00 0.00 3.58
2854 3127 2.821969 ACTCCAGGCTAAGCAAATTGTG 59.178 45.455 0.00 0.00 0.00 3.33
2855 3128 2.821969 CACTCCAGGCTAAGCAAATTGT 59.178 45.455 0.00 0.00 0.00 2.71
2856 3129 2.416431 GCACTCCAGGCTAAGCAAATTG 60.416 50.000 0.00 0.00 0.00 2.32
2857 3130 1.821136 GCACTCCAGGCTAAGCAAATT 59.179 47.619 0.00 0.00 0.00 1.82
2858 3131 1.467920 GCACTCCAGGCTAAGCAAAT 58.532 50.000 0.00 0.00 0.00 2.32
2859 3132 0.955428 CGCACTCCAGGCTAAGCAAA 60.955 55.000 0.00 0.00 0.00 3.68
2860 3133 1.375908 CGCACTCCAGGCTAAGCAA 60.376 57.895 0.00 0.00 0.00 3.91
2861 3134 2.265739 CGCACTCCAGGCTAAGCA 59.734 61.111 0.00 0.00 0.00 3.91
2862 3135 1.811679 GTCGCACTCCAGGCTAAGC 60.812 63.158 0.00 0.00 0.00 3.09
2863 3136 1.153549 GGTCGCACTCCAGGCTAAG 60.154 63.158 0.00 0.00 0.00 2.18
2864 3137 2.656069 GGGTCGCACTCCAGGCTAA 61.656 63.158 0.00 0.00 0.00 3.09
2865 3138 3.075005 GGGTCGCACTCCAGGCTA 61.075 66.667 0.00 0.00 0.00 3.93
2867 3140 4.767255 CTGGGTCGCACTCCAGGC 62.767 72.222 7.98 0.00 44.99 4.85
2871 3144 2.044806 ATATGCCTGGGTCGCACTCC 62.045 60.000 0.00 0.00 39.49 3.85
2872 3145 0.179045 AATATGCCTGGGTCGCACTC 60.179 55.000 0.00 0.00 39.49 3.51
2873 3146 0.464373 CAATATGCCTGGGTCGCACT 60.464 55.000 0.00 0.00 39.49 4.40
2874 3147 2.024918 CAATATGCCTGGGTCGCAC 58.975 57.895 0.00 0.00 39.49 5.34
2875 3148 1.823470 GCAATATGCCTGGGTCGCA 60.823 57.895 0.00 0.00 37.42 5.10
2876 3149 1.103398 AAGCAATATGCCTGGGTCGC 61.103 55.000 0.00 0.00 46.52 5.19
2877 3150 2.146342 CTAAGCAATATGCCTGGGTCG 58.854 52.381 0.00 0.00 46.52 4.79
2878 3151 1.882623 GCTAAGCAATATGCCTGGGTC 59.117 52.381 0.00 0.00 46.52 4.46
2879 3152 1.479389 GGCTAAGCAATATGCCTGGGT 60.479 52.381 0.00 0.00 46.52 4.51
2880 3153 1.251251 GGCTAAGCAATATGCCTGGG 58.749 55.000 0.00 0.00 46.52 4.45
2884 3157 1.202927 TCCCAGGCTAAGCAATATGCC 60.203 52.381 0.00 0.00 46.52 4.40
2885 3158 2.157738 CTCCCAGGCTAAGCAATATGC 58.842 52.381 0.00 0.00 45.46 3.14
2886 3159 3.777106 TCTCCCAGGCTAAGCAATATG 57.223 47.619 0.00 0.00 0.00 1.78
2887 3160 3.497584 GCTTCTCCCAGGCTAAGCAATAT 60.498 47.826 12.80 0.00 43.00 1.28
2888 3161 2.158755 GCTTCTCCCAGGCTAAGCAATA 60.159 50.000 12.80 0.00 43.00 1.90
2889 3162 1.409381 GCTTCTCCCAGGCTAAGCAAT 60.409 52.381 12.80 0.00 43.00 3.56
2890 3163 0.035056 GCTTCTCCCAGGCTAAGCAA 60.035 55.000 12.80 0.00 43.00 3.91
2891 3164 1.604378 GCTTCTCCCAGGCTAAGCA 59.396 57.895 12.80 0.00 43.00 3.91
2892 3165 1.522580 CGCTTCTCCCAGGCTAAGC 60.523 63.158 8.56 8.56 40.69 3.09
2893 3166 0.250513 AACGCTTCTCCCAGGCTAAG 59.749 55.000 0.00 0.00 0.00 2.18
2894 3167 0.249398 GAACGCTTCTCCCAGGCTAA 59.751 55.000 0.00 0.00 0.00 3.09
2895 3168 0.902984 TGAACGCTTCTCCCAGGCTA 60.903 55.000 0.00 0.00 0.00 3.93
2896 3169 1.768684 TTGAACGCTTCTCCCAGGCT 61.769 55.000 0.00 0.00 0.00 4.58
2897 3170 0.889186 TTTGAACGCTTCTCCCAGGC 60.889 55.000 0.00 0.00 0.00 4.85
2898 3171 1.604604 TTTTGAACGCTTCTCCCAGG 58.395 50.000 0.00 0.00 0.00 4.45
2915 3188 1.780919 AGCTACCCAGGTGTCCTTTTT 59.219 47.619 0.00 0.00 0.00 1.94
2916 3189 1.073923 CAGCTACCCAGGTGTCCTTTT 59.926 52.381 0.00 0.00 43.80 2.27
2917 3190 0.693049 CAGCTACCCAGGTGTCCTTT 59.307 55.000 0.00 0.00 43.80 3.11
2918 3191 2.377136 CAGCTACCCAGGTGTCCTT 58.623 57.895 0.00 0.00 43.80 3.36
2919 3192 4.136978 CAGCTACCCAGGTGTCCT 57.863 61.111 0.00 0.00 43.80 3.85
2920 3193 3.330992 GGCAGCTACCCAGGTGTCC 62.331 68.421 0.00 4.24 46.79 4.02
2924 3197 3.011517 CCAGGCAGCTACCCAGGT 61.012 66.667 0.00 0.00 0.00 4.00
2925 3198 3.011517 ACCAGGCAGCTACCCAGG 61.012 66.667 9.94 9.94 0.00 4.45
2926 3199 2.270205 CACCAGGCAGCTACCCAG 59.730 66.667 0.00 0.00 0.00 4.45
2927 3200 2.757145 TACCACCAGGCAGCTACCCA 62.757 60.000 0.00 0.00 39.06 4.51
2928 3201 1.559065 TTACCACCAGGCAGCTACCC 61.559 60.000 0.00 0.00 39.06 3.69
2929 3202 0.546598 ATTACCACCAGGCAGCTACC 59.453 55.000 0.00 0.00 39.06 3.18
2930 3203 1.209504 TCATTACCACCAGGCAGCTAC 59.790 52.381 0.00 0.00 39.06 3.58
2931 3204 1.486310 CTCATTACCACCAGGCAGCTA 59.514 52.381 0.00 0.00 39.06 3.32
2932 3205 0.254178 CTCATTACCACCAGGCAGCT 59.746 55.000 0.00 0.00 39.06 4.24
2933 3206 1.379642 GCTCATTACCACCAGGCAGC 61.380 60.000 0.00 0.00 39.06 5.25
2934 3207 0.254178 AGCTCATTACCACCAGGCAG 59.746 55.000 0.00 0.00 39.06 4.85
2935 3208 0.035152 CAGCTCATTACCACCAGGCA 60.035 55.000 0.00 0.00 39.06 4.75
2936 3209 1.379642 GCAGCTCATTACCACCAGGC 61.380 60.000 0.00 0.00 39.06 4.85
2937 3210 0.254178 AGCAGCTCATTACCACCAGG 59.746 55.000 0.00 0.00 42.21 4.45
2938 3211 2.988010 TAGCAGCTCATTACCACCAG 57.012 50.000 0.00 0.00 0.00 4.00
2939 3212 3.931907 AATAGCAGCTCATTACCACCA 57.068 42.857 0.00 0.00 0.00 4.17
2940 3213 3.565902 GGAAATAGCAGCTCATTACCACC 59.434 47.826 0.00 0.00 0.00 4.61
2941 3214 4.199310 TGGAAATAGCAGCTCATTACCAC 58.801 43.478 0.00 0.00 0.00 4.16
2942 3215 4.502105 TGGAAATAGCAGCTCATTACCA 57.498 40.909 0.00 0.93 0.00 3.25
2943 3216 4.884164 AGTTGGAAATAGCAGCTCATTACC 59.116 41.667 0.00 0.00 0.00 2.85
2944 3217 5.819901 AGAGTTGGAAATAGCAGCTCATTAC 59.180 40.000 0.00 0.00 0.00 1.89
2945 3218 5.994250 AGAGTTGGAAATAGCAGCTCATTA 58.006 37.500 0.00 0.00 0.00 1.90
2946 3219 4.853007 AGAGTTGGAAATAGCAGCTCATT 58.147 39.130 0.00 0.00 0.00 2.57
2947 3220 4.500499 AGAGTTGGAAATAGCAGCTCAT 57.500 40.909 0.00 0.00 0.00 2.90
2948 3221 3.988976 AGAGTTGGAAATAGCAGCTCA 57.011 42.857 0.00 0.00 0.00 4.26
2949 3222 5.635417 AAAAGAGTTGGAAATAGCAGCTC 57.365 39.130 0.00 0.00 0.00 4.09
2950 3223 5.302823 ACAAAAAGAGTTGGAAATAGCAGCT 59.697 36.000 0.00 0.00 32.50 4.24
2951 3224 5.532557 ACAAAAAGAGTTGGAAATAGCAGC 58.467 37.500 0.00 0.00 32.50 5.25
2952 3225 7.875971 ACTACAAAAAGAGTTGGAAATAGCAG 58.124 34.615 0.00 0.00 32.50 4.24
2953 3226 7.817418 ACTACAAAAAGAGTTGGAAATAGCA 57.183 32.000 0.00 0.00 32.50 3.49
2954 3227 9.608617 GTAACTACAAAAAGAGTTGGAAATAGC 57.391 33.333 0.00 0.00 36.58 2.97
2957 3230 8.630037 CCTGTAACTACAAAAAGAGTTGGAAAT 58.370 33.333 0.00 0.00 36.58 2.17
2958 3231 7.415877 GCCTGTAACTACAAAAAGAGTTGGAAA 60.416 37.037 0.00 0.00 36.58 3.13
2959 3232 6.038936 GCCTGTAACTACAAAAAGAGTTGGAA 59.961 38.462 0.00 0.00 36.58 3.53
2960 3233 5.529800 GCCTGTAACTACAAAAAGAGTTGGA 59.470 40.000 0.00 0.00 36.58 3.53
2961 3234 5.278315 GGCCTGTAACTACAAAAAGAGTTGG 60.278 44.000 0.00 0.00 36.58 3.77
2962 3235 5.531287 AGGCCTGTAACTACAAAAAGAGTTG 59.469 40.000 3.11 0.00 36.58 3.16
2963 3236 5.691896 AGGCCTGTAACTACAAAAAGAGTT 58.308 37.500 3.11 0.00 39.25 3.01
2964 3237 5.306114 AGGCCTGTAACTACAAAAAGAGT 57.694 39.130 3.11 0.00 35.50 3.24
2965 3238 5.763204 TGAAGGCCTGTAACTACAAAAAGAG 59.237 40.000 5.69 0.00 35.50 2.85
2966 3239 5.686753 TGAAGGCCTGTAACTACAAAAAGA 58.313 37.500 5.69 0.00 35.50 2.52
2967 3240 6.385649 TTGAAGGCCTGTAACTACAAAAAG 57.614 37.500 5.69 0.00 35.50 2.27
2968 3241 6.547880 TCATTGAAGGCCTGTAACTACAAAAA 59.452 34.615 5.69 0.00 35.50 1.94
2969 3242 6.065374 TCATTGAAGGCCTGTAACTACAAAA 58.935 36.000 5.69 0.00 35.50 2.44
2970 3243 5.626142 TCATTGAAGGCCTGTAACTACAAA 58.374 37.500 5.69 0.00 35.50 2.83
2971 3244 5.235850 TCATTGAAGGCCTGTAACTACAA 57.764 39.130 5.69 5.28 35.50 2.41
2972 3245 4.901197 TCATTGAAGGCCTGTAACTACA 57.099 40.909 5.69 0.00 34.56 2.74
2973 3246 4.576463 CCATCATTGAAGGCCTGTAACTAC 59.424 45.833 5.69 0.00 0.00 2.73
2974 3247 4.227300 ACCATCATTGAAGGCCTGTAACTA 59.773 41.667 5.69 0.00 0.00 2.24
2975 3248 3.010584 ACCATCATTGAAGGCCTGTAACT 59.989 43.478 5.69 0.00 0.00 2.24
2976 3249 3.356290 ACCATCATTGAAGGCCTGTAAC 58.644 45.455 5.69 0.00 0.00 2.50
2977 3250 3.737559 ACCATCATTGAAGGCCTGTAA 57.262 42.857 5.69 4.98 0.00 2.41
2978 3251 3.780294 AGTACCATCATTGAAGGCCTGTA 59.220 43.478 5.69 0.00 0.00 2.74
2979 3252 2.578021 AGTACCATCATTGAAGGCCTGT 59.422 45.455 5.69 0.00 0.00 4.00
2980 3253 3.287867 AGTACCATCATTGAAGGCCTG 57.712 47.619 5.69 0.00 0.00 4.85
2981 3254 6.959606 ATATAGTACCATCATTGAAGGCCT 57.040 37.500 0.00 0.00 0.00 5.19
2982 3255 9.686683 AATAATATAGTACCATCATTGAAGGCC 57.313 33.333 7.83 0.00 0.00 5.19
2999 3272 9.227777 GCCTGGGGTAGTGTTAAAATAATATAG 57.772 37.037 0.00 0.00 0.00 1.31
3000 3273 8.165397 GGCCTGGGGTAGTGTTAAAATAATATA 58.835 37.037 0.00 0.00 0.00 0.86
3001 3274 7.008332 GGCCTGGGGTAGTGTTAAAATAATAT 58.992 38.462 0.00 0.00 0.00 1.28
3002 3275 6.068971 TGGCCTGGGGTAGTGTTAAAATAATA 60.069 38.462 3.32 0.00 0.00 0.98
3003 3276 5.205821 GGCCTGGGGTAGTGTTAAAATAAT 58.794 41.667 0.00 0.00 0.00 1.28
3004 3277 4.044317 TGGCCTGGGGTAGTGTTAAAATAA 59.956 41.667 3.32 0.00 0.00 1.40
3005 3278 3.592427 TGGCCTGGGGTAGTGTTAAAATA 59.408 43.478 3.32 0.00 0.00 1.40
3006 3279 2.380590 TGGCCTGGGGTAGTGTTAAAAT 59.619 45.455 3.32 0.00 0.00 1.82
3007 3280 1.781529 TGGCCTGGGGTAGTGTTAAAA 59.218 47.619 3.32 0.00 0.00 1.52
3008 3281 1.353022 CTGGCCTGGGGTAGTGTTAAA 59.647 52.381 3.32 0.00 0.00 1.52
3009 3282 0.988832 CTGGCCTGGGGTAGTGTTAA 59.011 55.000 3.32 0.00 0.00 2.01
3010 3283 0.912487 CCTGGCCTGGGGTAGTGTTA 60.912 60.000 20.77 0.00 0.00 2.41
3011 3284 2.231380 CCTGGCCTGGGGTAGTGTT 61.231 63.158 20.77 0.00 0.00 3.32
3012 3285 2.610859 CCTGGCCTGGGGTAGTGT 60.611 66.667 20.77 0.00 0.00 3.55
3013 3286 2.285368 TCCTGGCCTGGGGTAGTG 60.285 66.667 26.94 1.21 0.00 2.74
3014 3287 2.285442 GTCCTGGCCTGGGGTAGT 60.285 66.667 26.94 0.00 0.00 2.73
3015 3288 2.285368 TGTCCTGGCCTGGGGTAG 60.285 66.667 26.94 3.50 0.00 3.18
3016 3289 2.285368 CTGTCCTGGCCTGGGGTA 60.285 66.667 26.94 13.23 0.00 3.69
3019 3292 3.970410 TTGCTGTCCTGGCCTGGG 61.970 66.667 26.94 17.69 0.00 4.45
3020 3293 2.674380 GTTGCTGTCCTGGCCTGG 60.674 66.667 22.36 22.36 0.00 4.45
3021 3294 1.108727 TTTGTTGCTGTCCTGGCCTG 61.109 55.000 3.32 2.54 0.00 4.85
3022 3295 0.396974 TTTTGTTGCTGTCCTGGCCT 60.397 50.000 3.32 0.00 0.00 5.19
3023 3296 0.249447 GTTTTGTTGCTGTCCTGGCC 60.249 55.000 0.00 0.00 0.00 5.36
3024 3297 0.459489 TGTTTTGTTGCTGTCCTGGC 59.541 50.000 0.00 0.00 0.00 4.85
3025 3298 1.476085 TGTGTTTTGTTGCTGTCCTGG 59.524 47.619 0.00 0.00 0.00 4.45
3026 3299 2.937469 TGTGTTTTGTTGCTGTCCTG 57.063 45.000 0.00 0.00 0.00 3.86
3027 3300 2.760092 ACATGTGTTTTGTTGCTGTCCT 59.240 40.909 0.00 0.00 0.00 3.85
3028 3301 3.163630 ACATGTGTTTTGTTGCTGTCC 57.836 42.857 0.00 0.00 0.00 4.02
3029 3302 4.148696 GCATACATGTGTTTTGTTGCTGTC 59.851 41.667 9.11 0.00 32.90 3.51
3030 3303 4.050553 GCATACATGTGTTTTGTTGCTGT 58.949 39.130 9.11 0.00 32.90 4.40
3031 3304 3.429543 GGCATACATGTGTTTTGTTGCTG 59.570 43.478 9.11 0.00 34.48 4.41
3032 3305 3.069300 TGGCATACATGTGTTTTGTTGCT 59.931 39.130 9.11 0.00 34.48 3.91
3033 3306 3.388308 TGGCATACATGTGTTTTGTTGC 58.612 40.909 9.11 0.00 33.89 4.17
3034 3307 3.989167 CCTGGCATACATGTGTTTTGTTG 59.011 43.478 9.11 0.00 0.00 3.33
3035 3308 3.554752 GCCTGGCATACATGTGTTTTGTT 60.555 43.478 15.17 0.00 0.00 2.83
3036 3309 2.029110 GCCTGGCATACATGTGTTTTGT 60.029 45.455 15.17 0.00 0.00 2.83
3037 3310 2.609350 GCCTGGCATACATGTGTTTTG 58.391 47.619 15.17 2.21 0.00 2.44
3038 3311 1.550072 GGCCTGGCATACATGTGTTTT 59.450 47.619 22.05 0.00 0.00 2.43
3039 3312 1.185315 GGCCTGGCATACATGTGTTT 58.815 50.000 22.05 0.00 0.00 2.83
3040 3313 0.039472 TGGCCTGGCATACATGTGTT 59.961 50.000 22.05 0.00 0.00 3.32
3041 3314 0.394762 CTGGCCTGGCATACATGTGT 60.395 55.000 22.05 0.00 0.00 3.72
3042 3315 1.731433 GCTGGCCTGGCATACATGTG 61.731 60.000 22.05 0.00 0.00 3.21
3043 3316 1.454479 GCTGGCCTGGCATACATGT 60.454 57.895 22.05 2.69 0.00 3.21
3044 3317 2.198287 GGCTGGCCTGGCATACATG 61.198 63.158 28.20 4.39 0.00 3.21
3045 3318 2.196776 GGCTGGCCTGGCATACAT 59.803 61.111 28.20 0.00 0.00 2.29
3046 3319 3.016971 AGGCTGGCCTGGCATACA 61.017 61.111 32.93 8.50 46.22 2.29
3061 3334 1.110442 TTGTTTTGTGCCTGGTGAGG 58.890 50.000 0.00 0.00 43.19 3.86
3062 3335 2.361757 TCATTGTTTTGTGCCTGGTGAG 59.638 45.455 0.00 0.00 0.00 3.51
3063 3336 2.382882 TCATTGTTTTGTGCCTGGTGA 58.617 42.857 0.00 0.00 0.00 4.02
3064 3337 2.886862 TCATTGTTTTGTGCCTGGTG 57.113 45.000 0.00 0.00 0.00 4.17
3065 3338 2.765699 ACTTCATTGTTTTGTGCCTGGT 59.234 40.909 0.00 0.00 0.00 4.00
3066 3339 3.457610 ACTTCATTGTTTTGTGCCTGG 57.542 42.857 0.00 0.00 0.00 4.45
3067 3340 4.202101 TGGTACTTCATTGTTTTGTGCCTG 60.202 41.667 0.00 0.00 35.08 4.85
3068 3341 3.957497 TGGTACTTCATTGTTTTGTGCCT 59.043 39.130 0.00 0.00 35.08 4.75
3069 3342 4.298332 CTGGTACTTCATTGTTTTGTGCC 58.702 43.478 0.00 0.00 34.70 5.01
3070 3343 4.298332 CCTGGTACTTCATTGTTTTGTGC 58.702 43.478 0.00 0.00 0.00 4.57
3071 3344 4.037923 AGCCTGGTACTTCATTGTTTTGTG 59.962 41.667 0.00 0.00 0.00 3.33
3072 3345 4.215109 AGCCTGGTACTTCATTGTTTTGT 58.785 39.130 0.00 0.00 0.00 2.83
3073 3346 4.278170 TGAGCCTGGTACTTCATTGTTTTG 59.722 41.667 0.00 0.00 0.00 2.44
3074 3347 4.469657 TGAGCCTGGTACTTCATTGTTTT 58.530 39.130 0.00 0.00 0.00 2.43
3075 3348 4.098914 TGAGCCTGGTACTTCATTGTTT 57.901 40.909 0.00 0.00 0.00 2.83
3076 3349 3.788227 TGAGCCTGGTACTTCATTGTT 57.212 42.857 0.00 0.00 0.00 2.83
3077 3350 3.788227 TTGAGCCTGGTACTTCATTGT 57.212 42.857 0.00 0.00 0.00 2.71
3078 3351 3.191371 GGTTTGAGCCTGGTACTTCATTG 59.809 47.826 0.00 0.00 0.00 2.82
3079 3352 3.181434 TGGTTTGAGCCTGGTACTTCATT 60.181 43.478 0.00 0.00 0.00 2.57
3080 3353 2.375174 TGGTTTGAGCCTGGTACTTCAT 59.625 45.455 0.00 0.00 0.00 2.57
3081 3354 1.771854 TGGTTTGAGCCTGGTACTTCA 59.228 47.619 0.00 0.00 0.00 3.02
3082 3355 2.427506 CTGGTTTGAGCCTGGTACTTC 58.572 52.381 0.00 0.00 0.00 3.01
3083 3356 1.073923 CCTGGTTTGAGCCTGGTACTT 59.926 52.381 0.00 0.00 41.17 2.24
3084 3357 0.693049 CCTGGTTTGAGCCTGGTACT 59.307 55.000 0.00 0.00 41.17 2.73
3085 3358 0.960861 GCCTGGTTTGAGCCTGGTAC 60.961 60.000 10.60 0.00 45.87 3.34
3086 3359 1.378762 GCCTGGTTTGAGCCTGGTA 59.621 57.895 10.60 0.00 45.87 3.25
3087 3360 2.116125 GCCTGGTTTGAGCCTGGT 59.884 61.111 10.60 0.00 45.87 4.00
3088 3361 1.531365 TTGCCTGGTTTGAGCCTGG 60.531 57.895 5.59 5.59 46.58 4.45
3089 3362 1.662044 GTTGCCTGGTTTGAGCCTG 59.338 57.895 0.00 0.00 0.00 4.85
3090 3363 1.531602 GGTTGCCTGGTTTGAGCCT 60.532 57.895 0.00 0.00 0.00 4.58
3091 3364 1.527433 GAGGTTGCCTGGTTTGAGCC 61.527 60.000 0.00 0.00 31.76 4.70
3092 3365 0.538287 AGAGGTTGCCTGGTTTGAGC 60.538 55.000 0.00 0.00 31.76 4.26
3093 3366 1.986882 AAGAGGTTGCCTGGTTTGAG 58.013 50.000 0.00 0.00 31.76 3.02
3094 3367 2.452600 AAAGAGGTTGCCTGGTTTGA 57.547 45.000 0.00 0.00 31.76 2.69
3095 3368 2.224042 GGAAAAGAGGTTGCCTGGTTTG 60.224 50.000 0.00 0.00 31.76 2.93
3096 3369 2.039418 GGAAAAGAGGTTGCCTGGTTT 58.961 47.619 0.00 0.00 31.76 3.27
3097 3370 1.704641 GGAAAAGAGGTTGCCTGGTT 58.295 50.000 0.00 0.00 31.76 3.67
3098 3371 0.178961 GGGAAAAGAGGTTGCCTGGT 60.179 55.000 0.00 0.00 36.15 4.00
3099 3372 0.178964 TGGGAAAAGAGGTTGCCTGG 60.179 55.000 0.00 0.00 39.60 4.45
3100 3373 1.251251 CTGGGAAAAGAGGTTGCCTG 58.749 55.000 0.00 0.00 39.60 4.85
3101 3374 0.113190 CCTGGGAAAAGAGGTTGCCT 59.887 55.000 0.00 0.00 39.60 4.75
3102 3375 1.536073 GCCTGGGAAAAGAGGTTGCC 61.536 60.000 0.00 0.00 39.35 4.52
3103 3376 0.827507 TGCCTGGGAAAAGAGGTTGC 60.828 55.000 0.00 0.00 0.00 4.17
3104 3377 1.547372 CATGCCTGGGAAAAGAGGTTG 59.453 52.381 0.00 0.00 0.00 3.77
3105 3378 1.428912 TCATGCCTGGGAAAAGAGGTT 59.571 47.619 0.00 0.00 0.00 3.50
3106 3379 1.075601 TCATGCCTGGGAAAAGAGGT 58.924 50.000 0.00 0.00 0.00 3.85
3107 3380 2.097825 CTTCATGCCTGGGAAAAGAGG 58.902 52.381 7.62 0.00 0.00 3.69
3108 3381 1.475682 GCTTCATGCCTGGGAAAAGAG 59.524 52.381 14.95 3.28 35.15 2.85
3109 3382 1.549203 GCTTCATGCCTGGGAAAAGA 58.451 50.000 14.95 1.93 35.15 2.52
3120 3393 2.556840 TAGTGGCCTGGGCTTCATGC 62.557 60.000 21.72 4.87 41.60 4.06
3121 3394 0.184451 ATAGTGGCCTGGGCTTCATG 59.816 55.000 21.72 0.00 41.60 3.07
3122 3395 1.819753 TATAGTGGCCTGGGCTTCAT 58.180 50.000 21.72 12.87 41.60 2.57
3123 3396 1.211949 GTTATAGTGGCCTGGGCTTCA 59.788 52.381 21.72 6.27 41.60 3.02
3124 3397 1.477014 GGTTATAGTGGCCTGGGCTTC 60.477 57.143 21.72 13.86 41.60 3.86
3125 3398 0.551396 GGTTATAGTGGCCTGGGCTT 59.449 55.000 21.72 11.92 41.60 4.35
3126 3399 0.623324 TGGTTATAGTGGCCTGGGCT 60.623 55.000 21.72 4.42 41.60 5.19
3127 3400 0.257616 TTGGTTATAGTGGCCTGGGC 59.742 55.000 14.23 14.23 41.06 5.36
3128 3401 2.291282 TGTTTGGTTATAGTGGCCTGGG 60.291 50.000 3.32 0.00 0.00 4.45
3129 3402 3.016736 CTGTTTGGTTATAGTGGCCTGG 58.983 50.000 3.32 0.00 0.00 4.45
3130 3403 3.016736 CCTGTTTGGTTATAGTGGCCTG 58.983 50.000 3.32 0.00 0.00 4.85
3131 3404 2.916934 TCCTGTTTGGTTATAGTGGCCT 59.083 45.455 3.32 0.00 37.07 5.19
3132 3405 3.014623 GTCCTGTTTGGTTATAGTGGCC 58.985 50.000 0.00 0.00 37.07 5.36
3133 3406 2.676342 CGTCCTGTTTGGTTATAGTGGC 59.324 50.000 0.00 0.00 37.07 5.01
3134 3407 3.934068 ACGTCCTGTTTGGTTATAGTGG 58.066 45.455 0.00 0.00 37.07 4.00
3135 3408 6.392354 TCTTACGTCCTGTTTGGTTATAGTG 58.608 40.000 0.00 0.00 37.07 2.74
3136 3409 6.594788 TCTTACGTCCTGTTTGGTTATAGT 57.405 37.500 0.00 0.00 37.07 2.12
3137 3410 7.894376 TTTCTTACGTCCTGTTTGGTTATAG 57.106 36.000 0.00 0.00 37.07 1.31
3138 3411 7.933033 ACTTTTCTTACGTCCTGTTTGGTTATA 59.067 33.333 0.00 0.00 37.07 0.98
3139 3412 6.769341 ACTTTTCTTACGTCCTGTTTGGTTAT 59.231 34.615 0.00 0.00 37.07 1.89
3140 3413 6.114767 ACTTTTCTTACGTCCTGTTTGGTTA 58.885 36.000 0.00 0.00 37.07 2.85
3141 3414 4.945543 ACTTTTCTTACGTCCTGTTTGGTT 59.054 37.500 0.00 0.00 37.07 3.67
3142 3415 4.520179 ACTTTTCTTACGTCCTGTTTGGT 58.480 39.130 0.00 0.00 37.07 3.67
3143 3416 5.987347 TCTACTTTTCTTACGTCCTGTTTGG 59.013 40.000 0.00 0.00 37.10 3.28
3144 3417 7.473027 TTCTACTTTTCTTACGTCCTGTTTG 57.527 36.000 0.00 0.00 0.00 2.93
3145 3418 7.713942 ACATTCTACTTTTCTTACGTCCTGTTT 59.286 33.333 0.00 0.00 0.00 2.83
3146 3419 7.215085 ACATTCTACTTTTCTTACGTCCTGTT 58.785 34.615 0.00 0.00 0.00 3.16
3147 3420 6.756221 ACATTCTACTTTTCTTACGTCCTGT 58.244 36.000 0.00 0.00 0.00 4.00
3148 3421 8.808529 CATACATTCTACTTTTCTTACGTCCTG 58.191 37.037 0.00 0.00 0.00 3.86
3149 3422 8.529476 ACATACATTCTACTTTTCTTACGTCCT 58.471 33.333 0.00 0.00 0.00 3.85
3150 3423 8.699283 ACATACATTCTACTTTTCTTACGTCC 57.301 34.615 0.00 0.00 0.00 4.79
3190 3463 8.506168 TCCCATTTACTGAATAATTGAGTGAC 57.494 34.615 0.00 0.00 0.00 3.67
3199 3472 9.753674 AGATTTGAGTTCCCATTTACTGAATAA 57.246 29.630 0.00 0.00 0.00 1.40
3298 3571 3.695830 ACGTGATTGCTAAAAGGAGGA 57.304 42.857 0.00 0.00 0.00 3.71
3316 3589 7.254227 ACTATTTACTGAGCTCTTCTCTACG 57.746 40.000 16.19 0.93 42.38 3.51
3322 3720 8.410141 ACATCACTACTATTTACTGAGCTCTTC 58.590 37.037 16.19 0.00 0.00 2.87
3373 3771 7.636150 ATGACTCATGGACAATCCTTTTAAG 57.364 36.000 0.00 0.00 37.46 1.85
3403 3834 5.448360 GGTCAAACATGCATTCTAGCTCTTC 60.448 44.000 0.00 0.00 34.99 2.87
3407 3838 3.689347 TGGTCAAACATGCATTCTAGCT 58.311 40.909 0.00 0.00 34.99 3.32
3408 3839 3.691118 TCTGGTCAAACATGCATTCTAGC 59.309 43.478 0.00 0.00 0.00 3.42
3409 3840 5.885230 TTCTGGTCAAACATGCATTCTAG 57.115 39.130 0.00 0.00 0.00 2.43
3417 3848 7.149569 AGTGACATTATTCTGGTCAAACATG 57.850 36.000 0.00 0.00 42.59 3.21
3423 3854 7.710907 GCATACTAAGTGACATTATTCTGGTCA 59.289 37.037 0.00 0.00 39.09 4.02
3424 3855 7.171678 GGCATACTAAGTGACATTATTCTGGTC 59.828 40.741 0.00 0.00 0.00 4.02
3426 3857 6.992123 TGGCATACTAAGTGACATTATTCTGG 59.008 38.462 0.00 0.00 27.32 3.86
3447 3878 7.941431 TGCAATGTCATAATATATGATGGCA 57.059 32.000 17.89 17.89 41.61 4.92
3465 3896 7.080099 GGCATACTAAGTGACATTATGCAATG 58.920 38.462 12.53 0.00 44.50 2.82
3466 3897 6.772233 TGGCATACTAAGTGACATTATGCAAT 59.228 34.615 12.53 0.00 44.50 3.56
3467 3898 6.118852 TGGCATACTAAGTGACATTATGCAA 58.881 36.000 12.53 0.30 44.50 4.08
3468 3899 5.679601 TGGCATACTAAGTGACATTATGCA 58.320 37.500 12.53 0.00 44.50 3.96
3469 3900 6.427853 TGATGGCATACTAAGTGACATTATGC 59.572 38.462 0.00 3.75 45.08 3.14
3470 3901 7.967890 TGATGGCATACTAAGTGACATTATG 57.032 36.000 0.00 0.00 45.08 1.90
3484 3915 9.888878 GCAATGTCATAATATATGATGGCATAC 57.111 33.333 24.53 17.73 45.34 2.39
3485 3916 9.629878 TGCAATGTCATAATATATGATGGCATA 57.370 29.630 24.53 11.18 45.34 3.14
3565 3996 9.836864 TCTATGTGATTGCTAAAAGTGTGATAT 57.163 29.630 0.00 0.00 0.00 1.63
3613 4044 8.664798 GTTCCCAAATAAAAAGCAACAATATCC 58.335 33.333 0.00 0.00 0.00 2.59
3615 4046 9.218440 CAGTTCCCAAATAAAAAGCAACAATAT 57.782 29.630 0.00 0.00 0.00 1.28
3653 4084 5.604231 TCAGGGCAGAGTCTACATGATAATT 59.396 40.000 0.00 0.00 0.00 1.40
3686 4117 7.466804 ACAGATAAGTTTTGGTCAGGGATTAA 58.533 34.615 0.00 0.00 0.00 1.40
3687 4118 7.027874 ACAGATAAGTTTTGGTCAGGGATTA 57.972 36.000 0.00 0.00 0.00 1.75
3698 4129 7.730364 AGGTTGTACTGACAGATAAGTTTTG 57.270 36.000 10.08 0.00 36.76 2.44
3723 4154 7.452880 TTTTGCTAGCATAGAGTTTGAACAT 57.547 32.000 20.13 0.00 42.77 2.71
3731 4162 9.921637 GAATCTACTATTTTGCTAGCATAGAGT 57.078 33.333 24.10 23.49 42.77 3.24
3780 4211 2.750166 TGCTCGGTCACAAGTTTGAAAA 59.250 40.909 0.00 0.00 0.00 2.29
3789 4220 2.805671 CAGTAACATTGCTCGGTCACAA 59.194 45.455 0.00 0.00 0.00 3.33
3790 4221 2.036604 TCAGTAACATTGCTCGGTCACA 59.963 45.455 0.00 0.00 0.00 3.58
3796 4227 6.142139 TGTGAAAAATCAGTAACATTGCTCG 58.858 36.000 0.00 0.00 0.00 5.03
3817 4248 9.549509 CCATGAAAAGAAAATATTGCAATTGTG 57.450 29.630 18.75 0.00 0.00 3.33
3818 4249 9.504708 TCCATGAAAAGAAAATATTGCAATTGT 57.495 25.926 18.75 4.13 0.00 2.71
3819 4250 9.982291 CTCCATGAAAAGAAAATATTGCAATTG 57.018 29.630 18.75 0.00 0.00 2.32
3820 4251 9.947433 TCTCCATGAAAAGAAAATATTGCAATT 57.053 25.926 18.75 0.00 0.00 2.32
3843 4313 8.599774 GTGAAGATTTAGCAGTTATCACTTCTC 58.400 37.037 0.00 0.00 34.58 2.87
3870 4340 7.232941 AGTTCAGACTAGTTTTCCTACAAGCTA 59.767 37.037 0.00 0.00 33.32 3.32
3899 4369 3.049206 CAACACCAAAACATTAGGCACG 58.951 45.455 0.00 0.00 0.00 5.34
3906 4376 5.546526 ACTTGACAACAACACCAAAACATT 58.453 33.333 0.00 0.00 32.27 2.71
3914 4384 6.035542 CCAATAACAAACTTGACAACAACACC 59.964 38.462 0.00 0.00 32.27 4.16
3936 4406 9.270640 CAACAAAACCAAAGAATGATATTCCAA 57.729 29.630 0.00 0.00 0.00 3.53
3944 4414 7.555087 ACTTCATCAACAAAACCAAAGAATGA 58.445 30.769 0.00 0.00 0.00 2.57
3945 4415 7.492020 TGACTTCATCAACAAAACCAAAGAATG 59.508 33.333 0.00 0.00 33.02 2.67
3946 4416 7.555087 TGACTTCATCAACAAAACCAAAGAAT 58.445 30.769 0.00 0.00 33.02 2.40
3988 4459 4.570772 TCCAAGAGTGTCGAAAGAAAACTG 59.429 41.667 0.00 0.00 45.01 3.16
3989 4460 4.766375 TCCAAGAGTGTCGAAAGAAAACT 58.234 39.130 0.00 0.00 45.01 2.66
3997 4468 1.938585 ATCCCTCCAAGAGTGTCGAA 58.061 50.000 0.00 0.00 0.00 3.71
3999 4470 3.722147 CAATATCCCTCCAAGAGTGTCG 58.278 50.000 0.00 0.00 0.00 4.35
4002 4473 3.118112 AGTGCAATATCCCTCCAAGAGTG 60.118 47.826 0.00 0.00 0.00 3.51
4009 4480 2.703007 AGAGACAGTGCAATATCCCTCC 59.297 50.000 0.00 0.00 0.00 4.30
4013 4484 6.155475 AGAGTAAGAGACAGTGCAATATCC 57.845 41.667 0.00 0.00 0.00 2.59
4015 4486 9.757227 GAATTAGAGTAAGAGACAGTGCAATAT 57.243 33.333 0.00 0.00 0.00 1.28
4157 4628 5.934625 AGTAGCATTAACACTTGAGGAGTTG 59.065 40.000 0.00 0.00 36.10 3.16
4166 4637 5.548406 ACCTTTCGAGTAGCATTAACACTT 58.452 37.500 0.00 0.00 0.00 3.16
4208 4679 5.177696 CCTATTCTTCAGCTTGCCGTAATAC 59.822 44.000 0.00 0.00 0.00 1.89
4422 4893 7.177878 AGAACAACAACAAATATCCTGGAGAT 58.822 34.615 1.52 0.00 39.15 2.75
4454 4925 6.016192 AGGAGTATGTGACATATCTAACACCG 60.016 42.308 8.72 0.00 33.08 4.94
4460 4931 5.243954 GGTGCAGGAGTATGTGACATATCTA 59.756 44.000 8.72 0.00 0.00 1.98
4542 5013 1.337728 TGAGAACCATGACGACGCATT 60.338 47.619 0.00 0.00 0.00 3.56
4549 5020 0.445436 GCTGCTTGAGAACCATGACG 59.555 55.000 0.00 0.00 0.00 4.35
4573 5044 1.622607 ATCAGATTCGTCGGGGCCAA 61.623 55.000 4.39 0.00 0.00 4.52
4598 5070 5.581085 ACAGCATCAGGTCGTTTTAATCTAC 59.419 40.000 0.00 0.00 0.00 2.59
4738 5210 6.851609 TGGTTATATTACAGCAGCACAAAAG 58.148 36.000 0.00 0.00 0.00 2.27
4753 5225 9.105844 AGTACAGCATAAGATCCTGGTTATATT 57.894 33.333 0.00 0.00 0.00 1.28
4849 5401 7.441836 TGTCGCAACTATATATGTTCAGGAAT 58.558 34.615 0.00 0.00 0.00 3.01
4850 5402 6.811954 TGTCGCAACTATATATGTTCAGGAA 58.188 36.000 0.00 0.00 0.00 3.36
4854 5406 9.244799 CTAGTTTGTCGCAACTATATATGTTCA 57.755 33.333 0.00 0.00 31.80 3.18
4857 5409 9.245962 GAACTAGTTTGTCGCAACTATATATGT 57.754 33.333 10.02 0.00 31.80 2.29
4868 5420 1.459209 CGCATGAACTAGTTTGTCGCA 59.541 47.619 10.02 2.90 0.00 5.10
4879 5431 1.802880 GCCATAGACGACGCATGAACT 60.803 52.381 0.00 0.00 0.00 3.01
4887 5439 1.517276 GTCGATTTGCCATAGACGACG 59.483 52.381 0.00 0.00 39.97 5.12
4895 5447 0.620556 ACCAGAGGTCGATTTGCCAT 59.379 50.000 0.00 0.00 0.00 4.40
4898 5450 1.464997 GTCAACCAGAGGTCGATTTGC 59.535 52.381 0.00 0.00 33.12 3.68
4918 5470 8.893727 AGTTTATCCAGATTGAAATAGTTTCCG 58.106 33.333 0.47 0.00 38.90 4.30
4990 5558 5.122396 GGTTGCAGAGATCGTTACATTTTCT 59.878 40.000 0.00 0.00 0.00 2.52
5029 5637 1.070445 TGTTTTGCCTGGAAGCCAATG 59.930 47.619 0.00 0.00 30.80 2.82
5031 5639 1.344114 GATGTTTTGCCTGGAAGCCAA 59.656 47.619 0.00 0.00 30.80 4.52
5032 5640 0.968405 GATGTTTTGCCTGGAAGCCA 59.032 50.000 0.00 0.00 0.00 4.75
5037 5645 2.886523 CTGAACTGATGTTTTGCCTGGA 59.113 45.455 0.00 0.00 36.39 3.86
5038 5646 2.624838 ACTGAACTGATGTTTTGCCTGG 59.375 45.455 0.00 0.00 36.39 4.45
5045 5653 4.780815 TGGACAGAACTGAACTGATGTTT 58.219 39.130 8.87 0.00 38.55 2.83
5048 5656 4.263018 TCTGGACAGAACTGAACTGATG 57.737 45.455 8.87 0.00 38.55 3.07
5065 5673 2.938756 GCAGGGATGACTGAAGTTCTGG 60.939 54.545 13.58 5.07 40.97 3.86
5066 5674 2.289882 TGCAGGGATGACTGAAGTTCTG 60.290 50.000 8.11 8.11 40.97 3.02
5067 5675 1.980765 TGCAGGGATGACTGAAGTTCT 59.019 47.619 4.17 0.00 40.97 3.01
5068 5676 2.479566 TGCAGGGATGACTGAAGTTC 57.520 50.000 0.00 0.00 40.97 3.01
5069 5677 2.356535 GGATGCAGGGATGACTGAAGTT 60.357 50.000 0.00 0.00 40.97 2.66
5070 5678 1.211457 GGATGCAGGGATGACTGAAGT 59.789 52.381 0.00 0.00 40.97 3.01
5071 5679 1.489649 AGGATGCAGGGATGACTGAAG 59.510 52.381 0.00 0.00 40.97 3.02
5072 5680 1.588239 AGGATGCAGGGATGACTGAA 58.412 50.000 0.00 0.00 40.97 3.02
5073 5681 1.487976 GAAGGATGCAGGGATGACTGA 59.512 52.381 0.00 0.00 40.97 3.41
5074 5682 1.809271 CGAAGGATGCAGGGATGACTG 60.809 57.143 0.00 0.00 41.41 3.51
5075 5683 0.467384 CGAAGGATGCAGGGATGACT 59.533 55.000 0.00 0.00 0.00 3.41
5076 5684 1.162800 GCGAAGGATGCAGGGATGAC 61.163 60.000 0.00 0.00 0.00 3.06
5077 5685 1.146930 GCGAAGGATGCAGGGATGA 59.853 57.895 0.00 0.00 0.00 2.92
5078 5686 0.536687 ATGCGAAGGATGCAGGGATG 60.537 55.000 0.00 0.00 46.98 3.51
5079 5687 0.184451 AATGCGAAGGATGCAGGGAT 59.816 50.000 0.00 0.00 46.98 3.85
5080 5688 0.034186 AAATGCGAAGGATGCAGGGA 60.034 50.000 0.00 0.00 46.98 4.20
5081 5689 0.819582 AAAATGCGAAGGATGCAGGG 59.180 50.000 0.00 0.00 46.98 4.45
5082 5690 2.660189 AAAAATGCGAAGGATGCAGG 57.340 45.000 0.00 0.00 46.98 4.85
5083 5691 6.038356 AGAAATAAAAATGCGAAGGATGCAG 58.962 36.000 0.00 0.00 46.98 4.41
5085 5693 5.172053 CGAGAAATAAAAATGCGAAGGATGC 59.828 40.000 0.00 0.00 37.86 3.91
5086 5694 6.412072 GTCGAGAAATAAAAATGCGAAGGATG 59.588 38.462 0.00 0.00 37.86 3.51
5087 5695 6.093495 TGTCGAGAAATAAAAATGCGAAGGAT 59.907 34.615 0.00 0.00 43.72 3.24
5088 5696 5.410132 TGTCGAGAAATAAAAATGCGAAGGA 59.590 36.000 0.00 0.00 0.00 3.36
5089 5697 5.627172 TGTCGAGAAATAAAAATGCGAAGG 58.373 37.500 0.00 0.00 0.00 3.46
5090 5698 7.547285 TTTGTCGAGAAATAAAAATGCGAAG 57.453 32.000 3.21 0.00 0.00 3.79
5091 5699 8.514136 AATTTGTCGAGAAATAAAAATGCGAA 57.486 26.923 19.59 0.00 0.00 4.70
5092 5700 7.272515 GGAATTTGTCGAGAAATAAAAATGCGA 59.727 33.333 19.59 0.00 0.00 5.10
5093 5701 7.273381 AGGAATTTGTCGAGAAATAAAAATGCG 59.727 33.333 19.59 0.00 0.00 4.73
5094 5702 8.375465 CAGGAATTTGTCGAGAAATAAAAATGC 58.625 33.333 19.59 9.87 0.00 3.56
5095 5703 9.624697 TCAGGAATTTGTCGAGAAATAAAAATG 57.375 29.630 19.59 13.86 0.00 2.32
5099 5707 9.840427 GAATTCAGGAATTTGTCGAGAAATAAA 57.160 29.630 19.59 10.30 40.77 1.40
5100 5708 8.175069 CGAATTCAGGAATTTGTCGAGAAATAA 58.825 33.333 19.59 10.94 40.77 1.40
5101 5709 7.676338 GCGAATTCAGGAATTTGTCGAGAAATA 60.676 37.037 19.59 4.85 41.83 1.40
5102 5710 6.546395 CGAATTCAGGAATTTGTCGAGAAAT 58.454 36.000 14.31 14.31 40.77 2.17
5103 5711 5.616866 GCGAATTCAGGAATTTGTCGAGAAA 60.617 40.000 10.43 10.43 41.83 2.52
5104 5712 4.142902 GCGAATTCAGGAATTTGTCGAGAA 60.143 41.667 18.51 0.00 41.83 2.87
5105 5713 3.370978 GCGAATTCAGGAATTTGTCGAGA 59.629 43.478 18.51 0.00 41.83 4.04
5106 5714 3.125146 TGCGAATTCAGGAATTTGTCGAG 59.875 43.478 18.51 5.80 41.83 4.04
5107 5715 3.070748 TGCGAATTCAGGAATTTGTCGA 58.929 40.909 18.51 5.58 41.83 4.20
5108 5716 3.163594 GTGCGAATTCAGGAATTTGTCG 58.836 45.455 18.51 13.93 41.83 4.35
5109 5717 4.159377 TGTGCGAATTCAGGAATTTGTC 57.841 40.909 18.51 13.08 41.83 3.18
5110 5718 4.298332 GTTGTGCGAATTCAGGAATTTGT 58.702 39.130 18.51 0.00 41.83 2.83
5111 5719 3.674753 GGTTGTGCGAATTCAGGAATTTG 59.325 43.478 14.84 14.84 40.77 2.32
5112 5720 3.573967 AGGTTGTGCGAATTCAGGAATTT 59.426 39.130 6.22 0.00 40.77 1.82
5113 5721 3.157087 AGGTTGTGCGAATTCAGGAATT 58.843 40.909 6.95 6.95 43.14 2.17
5114 5722 2.795329 AGGTTGTGCGAATTCAGGAAT 58.205 42.857 6.22 0.00 0.00 3.01
5115 5723 2.270352 AGGTTGTGCGAATTCAGGAA 57.730 45.000 6.22 0.00 0.00 3.36
5116 5724 3.627395 ATAGGTTGTGCGAATTCAGGA 57.373 42.857 6.22 0.00 0.00 3.86
5117 5725 4.260784 GCTTATAGGTTGTGCGAATTCAGG 60.261 45.833 6.22 0.00 0.00 3.86
5118 5726 4.837567 GCTTATAGGTTGTGCGAATTCAG 58.162 43.478 6.22 0.00 0.00 3.02
5119 5727 4.875544 GCTTATAGGTTGTGCGAATTCA 57.124 40.909 6.22 0.00 0.00 2.57
5126 5734 0.028110 GCTGCGCTTATAGGTTGTGC 59.972 55.000 9.73 0.00 37.67 4.57
5127 5735 0.657840 GGCTGCGCTTATAGGTTGTG 59.342 55.000 9.73 0.00 0.00 3.33
5128 5736 0.810031 CGGCTGCGCTTATAGGTTGT 60.810 55.000 9.73 0.00 0.00 3.32
5131 5739 1.254026 TATCGGCTGCGCTTATAGGT 58.746 50.000 9.73 0.00 0.00 3.08
5134 5742 3.945921 ACTCTATATCGGCTGCGCTTATA 59.054 43.478 9.73 0.00 0.00 0.98
5139 5747 1.457303 CAAACTCTATATCGGCTGCGC 59.543 52.381 0.00 0.00 0.00 6.09
5184 5792 6.542574 TTTGTTTGATGGATTTTCATGTGC 57.457 33.333 0.00 0.00 0.00 4.57
5201 5809 4.097892 AGAGACTGCAAATCCGTTTTGTTT 59.902 37.500 9.11 0.00 45.41 2.83
5217 6755 4.823989 CAGGGGCCATTTTATAAGAGACTG 59.176 45.833 4.39 0.00 0.00 3.51
5238 6778 5.124936 GTGGGTTTTAGCCTGGTTTATACAG 59.875 44.000 0.00 0.00 36.53 2.74
5239 6779 5.011586 GTGGGTTTTAGCCTGGTTTATACA 58.988 41.667 0.00 0.00 36.53 2.29
5240 6780 4.095334 CGTGGGTTTTAGCCTGGTTTATAC 59.905 45.833 0.00 0.00 36.53 1.47
5241 6781 4.263418 ACGTGGGTTTTAGCCTGGTTTATA 60.263 41.667 0.00 0.00 36.53 0.98
5242 6782 3.086282 CGTGGGTTTTAGCCTGGTTTAT 58.914 45.455 0.00 0.00 36.53 1.40
5276 6816 1.002857 AGATGGAAGGGGGTTTCTGG 58.997 55.000 0.00 0.00 0.00 3.86
5331 6871 2.440980 GGTGGGAGCTTGATGCCC 60.441 66.667 0.29 0.29 44.23 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.