Multiple sequence alignment - TraesCS1B01G267800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G267800 chr1B 100.000 5175 0 0 1 5175 470776655 470781829 0.000000e+00 9557.0
1 TraesCS1B01G267800 chr1B 81.031 485 49 20 1868 2328 232293697 232294162 3.840000e-91 346.0
2 TraesCS1B01G267800 chr1B 87.387 111 8 2 2635 2740 232306177 232306286 7.040000e-24 122.0
3 TraesCS1B01G267800 chr1B 94.340 53 3 0 2554 2606 232306122 232306174 1.190000e-11 82.4
4 TraesCS1B01G267800 chr1D 95.255 1981 65 13 2635 4607 349185335 349187294 0.000000e+00 3110.0
5 TraesCS1B01G267800 chr1D 87.489 2198 128 54 256 2364 349182780 349184919 0.000000e+00 2399.0
6 TraesCS1B01G267800 chr1D 85.481 551 69 11 4630 5175 52738462 52739006 9.730000e-157 564.0
7 TraesCS1B01G267800 chr1D 86.747 249 32 1 1 248 75768150 75768398 5.100000e-70 276.0
8 TraesCS1B01G267800 chr1D 93.333 90 4 1 2350 2437 349185177 349185266 1.170000e-26 132.0
9 TraesCS1B01G267800 chr1D 96.552 58 1 1 2558 2614 349185279 349185336 1.530000e-15 95.3
10 TraesCS1B01G267800 chr1A 92.990 1555 69 16 2831 4350 449557216 449558765 0.000000e+00 2231.0
11 TraesCS1B01G267800 chr1A 84.876 1415 95 36 1074 2437 449555622 449556968 0.000000e+00 1317.0
12 TraesCS1B01G267800 chr1A 84.179 335 20 11 639 949 449555207 449555532 1.410000e-75 294.0
13 TraesCS1B01G267800 chr1A 87.008 254 32 1 1 253 96240358 96240611 8.480000e-73 285.0
14 TraesCS1B01G267800 chr1A 86.400 250 33 1 4 252 166212045 166211796 6.600000e-69 272.0
15 TraesCS1B01G267800 chr1A 85.882 255 31 5 4 255 217907222 217906970 3.070000e-67 267.0
16 TraesCS1B01G267800 chr1A 86.555 238 31 1 4 240 166212968 166212731 1.430000e-65 261.0
17 TraesCS1B01G267800 chr1A 94.203 138 5 3 2435 2570 35530970 35531106 1.890000e-49 207.0
18 TraesCS1B01G267800 chr5D 86.438 553 64 6 4630 5175 407011270 407010722 3.450000e-166 595.0
19 TraesCS1B01G267800 chr5D 82.941 510 65 14 4630 5129 268571176 268571673 1.710000e-119 440.0
20 TraesCS1B01G267800 chr5B 86.076 553 66 6 4630 5175 488117204 488117752 7.470000e-163 584.0
21 TraesCS1B01G267800 chr5B 81.081 555 87 16 4631 5175 113803363 113802817 1.330000e-115 427.0
22 TraesCS1B01G267800 chr5B 92.453 53 4 0 2688 2740 527733045 527733097 5.560000e-10 76.8
23 TraesCS1B01G267800 chr2D 83.877 552 73 11 4630 5175 43279367 43278826 3.570000e-141 512.0
24 TraesCS1B01G267800 chr2D 81.208 596 44 39 1871 2437 645428277 645428833 8.010000e-113 418.0
25 TraesCS1B01G267800 chr2D 85.317 252 36 1 1 251 202604463 202604714 5.140000e-65 259.0
26 TraesCS1B01G267800 chr2D 85.425 247 35 1 4 249 179185948 179185702 6.650000e-64 255.0
27 TraesCS1B01G267800 chr2D 86.486 111 9 2 2635 2740 645428895 645429004 3.270000e-22 117.0
28 TraesCS1B01G267800 chr4B 86.512 430 52 4 4629 5052 427516746 427516317 7.850000e-128 468.0
29 TraesCS1B01G267800 chr7A 83.564 505 66 11 4630 5125 94803082 94802586 1.700000e-124 457.0
30 TraesCS1B01G267800 chr7A 85.600 250 35 1 4 252 149308853 149308604 1.430000e-65 261.0
31 TraesCS1B01G267800 chr7A 92.857 140 8 2 2422 2559 648146677 648146816 8.790000e-48 202.0
32 TraesCS1B01G267800 chr7A 79.290 169 27 8 3588 3752 209402391 209402227 1.520000e-20 111.0
33 TraesCS1B01G267800 chr2B 82.759 493 74 4 4630 5115 682182617 682183105 3.700000e-116 429.0
34 TraesCS1B01G267800 chr2B 82.407 216 24 9 4904 5106 733974491 733974705 5.330000e-40 176.0
35 TraesCS1B01G267800 chr3A 81.208 596 45 33 1871 2437 629105278 629105835 8.010000e-113 418.0
36 TraesCS1B01G267800 chr7D 81.835 534 40 27 1871 2379 41763904 41763403 3.760000e-106 396.0
37 TraesCS1B01G267800 chr7D 88.288 111 8 1 2635 2740 41756076 41755966 1.510000e-25 128.0
38 TraesCS1B01G267800 chr7D 79.290 169 27 8 3588 3752 199477702 199477538 1.520000e-20 111.0
39 TraesCS1B01G267800 chr7D 79.091 110 18 5 3651 3758 199426552 199426658 2.590000e-08 71.3
40 TraesCS1B01G267800 chr7B 79.866 596 49 33 1871 2437 575977959 575977406 2.280000e-98 370.0
41 TraesCS1B01G267800 chr7B 95.489 133 4 2 2435 2566 605989339 605989470 1.460000e-50 211.0
42 TraesCS1B01G267800 chr7B 85.586 111 11 1 2635 2740 575977344 575977234 1.520000e-20 111.0
43 TraesCS1B01G267800 chr7B 83.810 105 13 4 3650 3752 164075280 164075178 4.270000e-16 97.1
44 TraesCS1B01G267800 chr6B 79.357 591 54 33 1871 2436 671453529 671454076 2.290000e-93 353.0
45 TraesCS1B01G267800 chr3B 85.600 250 35 1 1 249 739335296 739335545 1.430000e-65 261.0
46 TraesCS1B01G267800 chr3B 94.776 134 5 2 2435 2566 636270252 636270385 1.890000e-49 207.0
47 TraesCS1B01G267800 chr3B 82.500 80 10 4 3650 3727 9188502 9188425 3.340000e-07 67.6
48 TraesCS1B01G267800 chr6A 97.619 126 2 1 2435 2559 594970512 594970387 1.130000e-51 215.0
49 TraesCS1B01G267800 chr6A 92.908 141 7 3 2422 2559 599910800 599910940 8.790000e-48 202.0
50 TraesCS1B01G267800 chr4A 97.619 126 2 1 2435 2559 548788804 548788929 1.130000e-51 215.0
51 TraesCS1B01G267800 chr5A 96.154 130 3 2 2431 2559 688512217 688512345 1.460000e-50 211.0
52 TraesCS1B01G267800 chr2A 95.489 133 5 1 2428 2559 440365413 440365545 1.460000e-50 211.0
53 TraesCS1B01G267800 chr6D 78.261 161 29 6 3650 3807 56552735 56552892 1.190000e-16 99.0
54 TraesCS1B01G267800 chr3D 77.931 145 30 2 3129 3272 7288413 7288270 7.140000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G267800 chr1B 470776655 470781829 5174 False 9557.000000 9557 100.000000 1 5175 1 chr1B.!!$F2 5174
1 TraesCS1B01G267800 chr1D 349182780 349187294 4514 False 1434.075000 3110 93.157250 256 4607 4 chr1D.!!$F3 4351
2 TraesCS1B01G267800 chr1D 52738462 52739006 544 False 564.000000 564 85.481000 4630 5175 1 chr1D.!!$F1 545
3 TraesCS1B01G267800 chr1A 449555207 449558765 3558 False 1280.666667 2231 87.348333 639 4350 3 chr1A.!!$F3 3711
4 TraesCS1B01G267800 chr1A 166211796 166212968 1172 True 266.500000 272 86.477500 4 252 2 chr1A.!!$R2 248
5 TraesCS1B01G267800 chr5D 407010722 407011270 548 True 595.000000 595 86.438000 4630 5175 1 chr5D.!!$R1 545
6 TraesCS1B01G267800 chr5B 488117204 488117752 548 False 584.000000 584 86.076000 4630 5175 1 chr5B.!!$F1 545
7 TraesCS1B01G267800 chr5B 113802817 113803363 546 True 427.000000 427 81.081000 4631 5175 1 chr5B.!!$R1 544
8 TraesCS1B01G267800 chr2D 43278826 43279367 541 True 512.000000 512 83.877000 4630 5175 1 chr2D.!!$R1 545
9 TraesCS1B01G267800 chr2D 645428277 645429004 727 False 267.500000 418 83.847000 1871 2740 2 chr2D.!!$F2 869
10 TraesCS1B01G267800 chr3A 629105278 629105835 557 False 418.000000 418 81.208000 1871 2437 1 chr3A.!!$F1 566
11 TraesCS1B01G267800 chr7D 41763403 41763904 501 True 396.000000 396 81.835000 1871 2379 1 chr7D.!!$R2 508
12 TraesCS1B01G267800 chr7B 575977234 575977959 725 True 240.500000 370 82.726000 1871 2740 2 chr7B.!!$R2 869
13 TraesCS1B01G267800 chr6B 671453529 671454076 547 False 353.000000 353 79.357000 1871 2436 1 chr6B.!!$F1 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
475 485 0.035317 TGCGGTGCAGAAGATCAAGT 59.965 50.0 0.00 0.0 33.32 3.16 F
1004 1062 0.036952 CGCTCATCTTCCACCACTGT 60.037 55.0 0.00 0.0 0.00 3.55 F
1853 1950 0.242555 CGCAGTTTTGGCCCGTAATT 59.757 50.0 0.00 0.0 0.00 1.40 F
2772 3611 0.592637 CCAGCTGTTTTGCATCACGA 59.407 50.0 13.81 0.0 34.99 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1853 1950 0.039180 TGGGACAGAGACGCTTCCTA 59.961 55.0 7.13 0.59 0.00 2.94 R
2544 3095 0.034337 TTTTCACTCCCTCCGTTCCG 59.966 55.0 0.00 0.00 0.00 4.30 R
2844 3685 0.601046 CTGGACGTTGCTCAAGCTCA 60.601 55.0 3.32 0.00 42.66 4.26 R
4683 5572 0.037975 GGCCGACTTTTCCGTCTACA 60.038 55.0 0.00 0.00 0.00 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 7.692460 AGAATTAGCAATGAGTGTTTGATGA 57.308 32.000 0.00 0.00 0.00 2.92
56 57 7.920160 TTAGCAATGAGTGTTTGATGACATA 57.080 32.000 0.00 0.00 0.00 2.29
58 59 6.175471 AGCAATGAGTGTTTGATGACATAGA 58.825 36.000 0.00 0.00 0.00 1.98
96 97 8.934023 ATTGTAAAAGAAAGTTGGAGTGGATA 57.066 30.769 0.00 0.00 0.00 2.59
98 99 8.934023 TGTAAAAGAAAGTTGGAGTGGATATT 57.066 30.769 0.00 0.00 0.00 1.28
102 103 9.981460 AAAAGAAAGTTGGAGTGGATATTAGAT 57.019 29.630 0.00 0.00 0.00 1.98
103 104 9.981460 AAAGAAAGTTGGAGTGGATATTAGATT 57.019 29.630 0.00 0.00 0.00 2.40
104 105 9.981460 AAGAAAGTTGGAGTGGATATTAGATTT 57.019 29.630 0.00 0.00 0.00 2.17
105 106 9.981460 AGAAAGTTGGAGTGGATATTAGATTTT 57.019 29.630 0.00 0.00 0.00 1.82
107 108 9.981460 AAAGTTGGAGTGGATATTAGATTTTCT 57.019 29.630 0.00 0.00 0.00 2.52
136 137 9.672673 AAAATATATTCCAGACGATTCCATAGG 57.327 33.333 0.00 0.00 0.00 2.57
137 138 8.609617 AATATATTCCAGACGATTCCATAGGA 57.390 34.615 0.00 0.00 0.00 2.94
138 139 6.935240 ATATTCCAGACGATTCCATAGGAA 57.065 37.500 0.30 0.30 46.39 3.36
139 140 5.630415 ATTCCAGACGATTCCATAGGAAA 57.370 39.130 2.16 0.00 45.41 3.13
140 141 5.429681 TTCCAGACGATTCCATAGGAAAA 57.570 39.130 2.16 0.00 45.41 2.29
141 142 5.429681 TCCAGACGATTCCATAGGAAAAA 57.570 39.130 2.16 0.00 45.41 1.94
142 143 6.001449 TCCAGACGATTCCATAGGAAAAAT 57.999 37.500 2.16 0.00 45.41 1.82
143 144 6.423182 TCCAGACGATTCCATAGGAAAAATT 58.577 36.000 2.16 0.00 45.41 1.82
144 145 6.542370 TCCAGACGATTCCATAGGAAAAATTC 59.458 38.462 2.16 0.00 45.41 2.17
145 146 6.238759 CCAGACGATTCCATAGGAAAAATTCC 60.239 42.308 2.16 0.75 45.41 3.01
160 161 8.877808 GGAAAAATTCCTATGTGATTCAATCC 57.122 34.615 1.86 0.00 46.57 3.01
161 162 8.477256 GGAAAAATTCCTATGTGATTCAATCCA 58.523 33.333 1.86 0.00 46.57 3.41
163 164 9.826574 AAAAATTCCTATGTGATTCAATCCATG 57.173 29.630 10.16 0.00 0.00 3.66
164 165 8.771521 AAATTCCTATGTGATTCAATCCATGA 57.228 30.769 10.16 0.68 35.85 3.07
175 176 5.920193 TTCAATCCATGAATCAAAGGACC 57.080 39.130 9.49 0.00 43.08 4.46
176 177 4.933134 TCAATCCATGAATCAAAGGACCA 58.067 39.130 9.49 0.00 34.30 4.02
177 178 5.331906 TCAATCCATGAATCAAAGGACCAA 58.668 37.500 9.49 0.00 34.30 3.67
178 179 5.185635 TCAATCCATGAATCAAAGGACCAAC 59.814 40.000 9.49 0.00 34.30 3.77
179 180 4.111255 TCCATGAATCAAAGGACCAACA 57.889 40.909 4.02 0.00 0.00 3.33
180 181 4.478203 TCCATGAATCAAAGGACCAACAA 58.522 39.130 4.02 0.00 0.00 2.83
181 182 4.898265 TCCATGAATCAAAGGACCAACAAA 59.102 37.500 4.02 0.00 0.00 2.83
182 183 5.010922 TCCATGAATCAAAGGACCAACAAAG 59.989 40.000 4.02 0.00 0.00 2.77
183 184 4.935352 TGAATCAAAGGACCAACAAAGG 57.065 40.909 0.00 0.00 0.00 3.11
184 185 4.541705 TGAATCAAAGGACCAACAAAGGA 58.458 39.130 0.00 0.00 0.00 3.36
185 186 4.959210 TGAATCAAAGGACCAACAAAGGAA 59.041 37.500 0.00 0.00 0.00 3.36
186 187 5.423610 TGAATCAAAGGACCAACAAAGGAAA 59.576 36.000 0.00 0.00 0.00 3.13
187 188 5.948742 ATCAAAGGACCAACAAAGGAAAA 57.051 34.783 0.00 0.00 0.00 2.29
188 189 5.079689 TCAAAGGACCAACAAAGGAAAAC 57.920 39.130 0.00 0.00 0.00 2.43
189 190 4.528596 TCAAAGGACCAACAAAGGAAAACA 59.471 37.500 0.00 0.00 0.00 2.83
190 191 5.188751 TCAAAGGACCAACAAAGGAAAACAT 59.811 36.000 0.00 0.00 0.00 2.71
191 192 4.937201 AGGACCAACAAAGGAAAACATC 57.063 40.909 0.00 0.00 0.00 3.06
207 208 8.932945 GGAAAACATCCTTAGAATTTCAATCC 57.067 34.615 0.00 0.00 45.56 3.01
208 209 8.753133 GGAAAACATCCTTAGAATTTCAATCCT 58.247 33.333 0.00 0.00 45.56 3.24
209 210 9.794685 GAAAACATCCTTAGAATTTCAATCCTC 57.205 33.333 0.00 0.00 0.00 3.71
210 211 7.888250 AACATCCTTAGAATTTCAATCCTCC 57.112 36.000 0.00 0.00 0.00 4.30
211 212 6.973642 ACATCCTTAGAATTTCAATCCTCCA 58.026 36.000 0.00 0.00 0.00 3.86
212 213 7.059156 ACATCCTTAGAATTTCAATCCTCCAG 58.941 38.462 0.00 0.00 0.00 3.86
213 214 6.891306 TCCTTAGAATTTCAATCCTCCAGA 57.109 37.500 0.00 0.00 0.00 3.86
214 215 7.270832 TCCTTAGAATTTCAATCCTCCAGAA 57.729 36.000 0.00 0.00 0.00 3.02
215 216 7.698912 TCCTTAGAATTTCAATCCTCCAGAAA 58.301 34.615 0.00 0.00 35.92 2.52
216 217 8.339247 TCCTTAGAATTTCAATCCTCCAGAAAT 58.661 33.333 0.00 0.00 42.10 2.17
217 218 8.628280 CCTTAGAATTTCAATCCTCCAGAAATC 58.372 37.037 0.00 0.00 40.11 2.17
218 219 8.525290 TTAGAATTTCAATCCTCCAGAAATCC 57.475 34.615 0.00 0.00 40.11 3.01
219 220 6.739664 AGAATTTCAATCCTCCAGAAATCCT 58.260 36.000 0.00 0.00 40.11 3.24
220 221 6.606395 AGAATTTCAATCCTCCAGAAATCCTG 59.394 38.462 0.00 0.00 40.11 3.86
221 222 3.287867 TCAATCCTCCAGAAATCCTGC 57.712 47.619 0.00 0.00 41.57 4.85
222 223 2.577563 TCAATCCTCCAGAAATCCTGCA 59.422 45.455 0.00 0.00 41.57 4.41
223 224 3.010472 TCAATCCTCCAGAAATCCTGCAA 59.990 43.478 0.00 0.00 41.57 4.08
224 225 3.744940 ATCCTCCAGAAATCCTGCAAA 57.255 42.857 0.00 0.00 41.57 3.68
225 226 3.077484 TCCTCCAGAAATCCTGCAAAG 57.923 47.619 0.00 0.00 41.57 2.77
226 227 2.376518 TCCTCCAGAAATCCTGCAAAGT 59.623 45.455 0.00 0.00 41.57 2.66
227 228 3.160269 CCTCCAGAAATCCTGCAAAGTT 58.840 45.455 0.00 0.00 41.57 2.66
228 229 3.192212 CCTCCAGAAATCCTGCAAAGTTC 59.808 47.826 1.77 1.77 41.57 3.01
229 230 3.157087 TCCAGAAATCCTGCAAAGTTCC 58.843 45.455 5.58 0.00 41.57 3.62
230 231 3.160269 CCAGAAATCCTGCAAAGTTCCT 58.840 45.455 5.58 0.00 41.57 3.36
231 232 3.575687 CCAGAAATCCTGCAAAGTTCCTT 59.424 43.478 5.58 0.00 41.57 3.36
232 233 4.039609 CCAGAAATCCTGCAAAGTTCCTTT 59.960 41.667 5.58 0.00 41.57 3.11
251 252 5.982890 CTTTGAATCAAAGGAGCCCTTAA 57.017 39.130 23.96 0.54 43.92 1.85
252 253 5.714047 CTTTGAATCAAAGGAGCCCTTAAC 58.286 41.667 23.96 0.25 43.92 2.01
253 254 3.697166 TGAATCAAAGGAGCCCTTAACC 58.303 45.455 6.88 0.00 43.92 2.85
254 255 2.420058 ATCAAAGGAGCCCTTAACCG 57.580 50.000 6.88 0.00 43.92 4.44
263 264 1.144298 AGCCCTTAACCGGTCAACTTT 59.856 47.619 8.04 0.00 0.00 2.66
264 265 1.268625 GCCCTTAACCGGTCAACTTTG 59.731 52.381 8.04 0.00 0.00 2.77
266 267 2.953648 CCCTTAACCGGTCAACTTTGTT 59.046 45.455 8.04 0.00 0.00 2.83
270 271 5.488645 TTAACCGGTCAACTTTGTTCTTC 57.511 39.130 8.04 0.00 0.00 2.87
272 273 3.617284 ACCGGTCAACTTTGTTCTTCTT 58.383 40.909 0.00 0.00 0.00 2.52
274 275 4.814771 ACCGGTCAACTTTGTTCTTCTTAG 59.185 41.667 0.00 0.00 0.00 2.18
310 311 9.921637 AAATGATAAATCTTTTGGCTCGTTTAA 57.078 25.926 3.74 0.00 34.23 1.52
312 313 8.736751 TGATAAATCTTTTGGCTCGTTTAAAC 57.263 30.769 8.35 8.35 0.00 2.01
318 319 6.801575 TCTTTTGGCTCGTTTAAACTGAAAT 58.198 32.000 16.01 0.00 0.00 2.17
319 320 7.932335 TCTTTTGGCTCGTTTAAACTGAAATA 58.068 30.769 16.01 2.62 0.00 1.40
320 321 7.858879 TCTTTTGGCTCGTTTAAACTGAAATAC 59.141 33.333 16.01 6.50 0.00 1.89
321 322 6.621316 TTGGCTCGTTTAAACTGAAATACA 57.379 33.333 16.01 8.42 0.00 2.29
337 342 2.900716 TACAGTACACAGCAGCAACA 57.099 45.000 0.00 0.00 0.00 3.33
340 345 2.097466 ACAGTACACAGCAGCAACAAAC 59.903 45.455 0.00 0.00 0.00 2.93
348 353 1.206115 GCAGCAACAAACGTTTCCGG 61.206 55.000 11.37 2.71 38.78 5.14
350 355 1.096416 AGCAACAAACGTTTCCGGAA 58.904 45.000 14.35 14.35 38.78 4.30
351 356 1.679153 AGCAACAAACGTTTCCGGAAT 59.321 42.857 19.62 0.00 38.78 3.01
360 365 1.025041 GTTTCCGGAATGAGATGCCC 58.975 55.000 19.62 0.00 0.00 5.36
387 392 2.606587 AAAGCCGAGCCATCCCACT 61.607 57.895 0.00 0.00 0.00 4.00
392 397 1.299648 CGAGCCATCCCACTGGAAA 59.700 57.895 0.00 0.00 45.98 3.13
393 398 0.107017 CGAGCCATCCCACTGGAAAT 60.107 55.000 0.00 0.00 45.98 2.17
394 399 1.685148 GAGCCATCCCACTGGAAATC 58.315 55.000 0.00 0.00 45.98 2.17
395 400 0.259938 AGCCATCCCACTGGAAATCC 59.740 55.000 0.00 0.00 45.98 3.01
396 401 1.103398 GCCATCCCACTGGAAATCCG 61.103 60.000 0.00 0.00 45.98 4.18
397 402 0.466189 CCATCCCACTGGAAATCCGG 60.466 60.000 6.74 6.74 45.98 5.14
398 403 1.103398 CATCCCACTGGAAATCCGGC 61.103 60.000 8.22 0.00 45.98 6.13
399 404 2.284515 ATCCCACTGGAAATCCGGCC 62.285 60.000 8.22 0.00 45.98 6.13
400 405 2.824041 CCACTGGAAATCCGGCCG 60.824 66.667 21.04 21.04 46.43 6.13
401 406 2.267642 CACTGGAAATCCGGCCGA 59.732 61.111 30.73 13.82 46.43 5.54
402 407 1.815421 CACTGGAAATCCGGCCGAG 60.815 63.158 30.73 16.96 46.43 4.63
403 408 2.203070 CTGGAAATCCGGCCGAGG 60.203 66.667 30.73 11.63 39.43 4.63
404 409 4.483243 TGGAAATCCGGCCGAGGC 62.483 66.667 30.73 10.84 39.43 4.70
415 420 2.429571 CCGAGGCGACGACGAAAA 60.430 61.111 12.29 0.00 42.66 2.29
416 421 2.017783 CCGAGGCGACGACGAAAAA 61.018 57.895 12.29 0.00 42.66 1.94
441 451 1.138883 CACATGATGTGCAGCAGGC 59.861 57.895 13.15 0.00 41.89 4.85
444 454 1.000019 ATGATGTGCAGCAGGCCTT 60.000 52.632 0.00 0.00 43.89 4.35
445 455 0.256752 ATGATGTGCAGCAGGCCTTA 59.743 50.000 0.00 0.00 43.89 2.69
475 485 0.035317 TGCGGTGCAGAAGATCAAGT 59.965 50.000 0.00 0.00 33.32 3.16
476 486 0.723981 GCGGTGCAGAAGATCAAGTC 59.276 55.000 0.00 0.00 0.00 3.01
477 487 1.363744 CGGTGCAGAAGATCAAGTCC 58.636 55.000 0.00 0.00 0.00 3.85
478 488 1.363744 GGTGCAGAAGATCAAGTCCG 58.636 55.000 0.00 0.00 0.00 4.79
479 489 1.363744 GTGCAGAAGATCAAGTCCGG 58.636 55.000 0.00 0.00 0.00 5.14
480 490 1.066858 GTGCAGAAGATCAAGTCCGGA 60.067 52.381 0.00 0.00 0.00 5.14
481 491 1.205655 TGCAGAAGATCAAGTCCGGAG 59.794 52.381 3.06 0.00 0.00 4.63
482 492 1.205893 GCAGAAGATCAAGTCCGGAGT 59.794 52.381 3.06 4.57 0.00 3.85
600 612 1.074951 TCCTCCTCGCTCTGACACA 59.925 57.895 0.00 0.00 0.00 3.72
605 617 1.006922 CTCGCTCTGACACACAGCA 60.007 57.895 0.00 0.00 45.38 4.41
753 773 2.214181 GAGAGACGAGCGGAAAGGCA 62.214 60.000 0.00 0.00 34.64 4.75
887 927 1.229658 CACCCACTCCTCCCTTCCT 60.230 63.158 0.00 0.00 0.00 3.36
969 1009 2.574399 GAGCCAGGACTGACGACC 59.426 66.667 0.00 0.00 0.00 4.79
1002 1060 0.904865 TCCGCTCATCTTCCACCACT 60.905 55.000 0.00 0.00 0.00 4.00
1004 1062 0.036952 CGCTCATCTTCCACCACTGT 60.037 55.000 0.00 0.00 0.00 3.55
1006 1064 1.277557 GCTCATCTTCCACCACTGTCT 59.722 52.381 0.00 0.00 0.00 3.41
1007 1065 2.676463 GCTCATCTTCCACCACTGTCTC 60.676 54.545 0.00 0.00 0.00 3.36
1009 1067 0.898320 ATCTTCCACCACTGTCTCCG 59.102 55.000 0.00 0.00 0.00 4.63
1011 1069 2.788191 CTTCCACCACTGTCTCCGCC 62.788 65.000 0.00 0.00 0.00 6.13
1012 1070 4.394712 CCACCACTGTCTCCGCCC 62.395 72.222 0.00 0.00 0.00 6.13
1034 1096 2.357517 CCTTGCACGCCTCTTCGT 60.358 61.111 0.00 0.00 44.35 3.85
1035 1097 2.383527 CCTTGCACGCCTCTTCGTC 61.384 63.158 0.00 0.00 41.21 4.20
1045 1107 2.979197 CTCTTCGTCCTCCGTGCGT 61.979 63.158 0.00 0.00 37.94 5.24
1048 1110 3.141522 TTCGTCCTCCGTGCGTGTT 62.142 57.895 0.00 0.00 37.94 3.32
1049 1111 1.794151 TTCGTCCTCCGTGCGTGTTA 61.794 55.000 0.00 0.00 37.94 2.41
1050 1112 1.800315 CGTCCTCCGTGCGTGTTAG 60.800 63.158 0.00 0.00 0.00 2.34
1051 1113 1.445582 GTCCTCCGTGCGTGTTAGG 60.446 63.158 0.00 0.00 0.00 2.69
1052 1114 2.813908 CCTCCGTGCGTGTTAGGC 60.814 66.667 0.00 0.00 0.00 3.93
1053 1115 2.813908 CTCCGTGCGTGTTAGGCC 60.814 66.667 0.00 0.00 0.00 5.19
1054 1116 4.728102 TCCGTGCGTGTTAGGCCG 62.728 66.667 0.00 0.00 0.00 6.13
1055 1117 4.728102 CCGTGCGTGTTAGGCCGA 62.728 66.667 0.00 0.00 0.00 5.54
1060 1122 1.226717 GCGTGTTAGGCCGAGAGAG 60.227 63.158 0.00 0.00 0.00 3.20
1061 1123 1.654954 GCGTGTTAGGCCGAGAGAGA 61.655 60.000 0.00 0.00 0.00 3.10
1063 1125 0.456628 GTGTTAGGCCGAGAGAGACC 59.543 60.000 0.00 0.00 0.00 3.85
1064 1126 0.331954 TGTTAGGCCGAGAGAGACCT 59.668 55.000 0.00 0.00 36.27 3.85
1065 1127 0.741915 GTTAGGCCGAGAGAGACCTG 59.258 60.000 0.00 0.00 33.60 4.00
1066 1128 0.395862 TTAGGCCGAGAGAGACCTGG 60.396 60.000 0.00 0.00 33.60 4.45
1067 1129 1.572689 TAGGCCGAGAGAGACCTGGT 61.573 60.000 0.00 0.00 33.60 4.00
1068 1130 2.716017 GGCCGAGAGAGACCTGGTG 61.716 68.421 2.82 0.00 0.00 4.17
1069 1131 2.716017 GCCGAGAGAGACCTGGTGG 61.716 68.421 2.82 0.00 39.83 4.61
1070 1132 2.716017 CCGAGAGAGACCTGGTGGC 61.716 68.421 2.82 0.00 36.63 5.01
1071 1133 2.716017 CGAGAGAGACCTGGTGGCC 61.716 68.421 2.82 0.00 36.63 5.36
1072 1134 1.610673 GAGAGAGACCTGGTGGCCA 60.611 63.158 2.82 0.00 36.63 5.36
1117 1179 4.785512 ACTCGAAGCTGCTCCGCG 62.786 66.667 2.48 0.00 34.40 6.46
1159 1221 4.424711 GGTTCCGGATGCTGGCCA 62.425 66.667 4.15 4.71 0.00 5.36
1170 1232 2.264480 CTGGCCATCGTTGTCGGA 59.736 61.111 5.51 0.00 37.69 4.55
1259 1324 7.713764 AGTTTCCTTTCAAATTTCAATTCCG 57.286 32.000 0.00 0.00 0.00 4.30
1283 1348 3.445857 CTTATTCGTTTCTCGGGACTCC 58.554 50.000 0.00 0.00 40.32 3.85
1331 1404 2.065993 TTCTTGAAGAAGACGCTCGG 57.934 50.000 3.02 0.00 37.97 4.63
1445 1521 2.954753 GCAGAAGGTCAACACGCCG 61.955 63.158 0.00 0.00 0.00 6.46
1481 1557 2.966324 CGACGCCATCATCGGTAAA 58.034 52.632 0.00 0.00 34.67 2.01
1482 1558 1.497991 CGACGCCATCATCGGTAAAT 58.502 50.000 0.00 0.00 34.67 1.40
1529 1605 2.748532 CCCCGTTAATTCTTGCCGTTTA 59.251 45.455 0.00 0.00 0.00 2.01
1560 1640 2.955881 CGGCCGTTTCCTCCTCCTT 61.956 63.158 19.50 0.00 0.00 3.36
1702 1799 2.482142 CCACGGCTCCTTTACAGAGATC 60.482 54.545 0.00 0.00 32.86 2.75
1717 1814 2.759973 ATCAGAGGCGGCGAGGAA 60.760 61.111 12.98 0.00 0.00 3.36
1727 1824 1.107538 CGGCGAGGAAGAGGACCATA 61.108 60.000 0.00 0.00 0.00 2.74
1841 1938 1.812686 TAGGTCAGCCGTCGCAGTTT 61.813 55.000 0.00 0.00 40.50 2.66
1848 1945 4.383602 CGTCGCAGTTTTGGCCCG 62.384 66.667 0.00 0.00 0.00 6.13
1853 1950 0.242555 CGCAGTTTTGGCCCGTAATT 59.757 50.000 0.00 0.00 0.00 1.40
1856 1953 2.159296 GCAGTTTTGGCCCGTAATTAGG 60.159 50.000 0.00 0.00 0.00 2.69
1943 2051 1.890876 TGAATGTTCCTTCCGTGTGG 58.109 50.000 0.00 0.00 0.00 4.17
1953 2061 3.403057 CCGTGTGGTCGTGCTTCG 61.403 66.667 0.00 0.00 41.41 3.79
1954 2062 2.354188 CGTGTGGTCGTGCTTCGA 60.354 61.111 0.92 0.92 46.83 3.71
1989 2097 2.559440 GCTGAGATGAGATGGTTGGTC 58.441 52.381 0.00 0.00 0.00 4.02
2017 2129 1.518302 GGGAGAGGAAAGACGAGGC 59.482 63.158 0.00 0.00 0.00 4.70
2198 2447 5.103000 CCCATTTACTTAGTCAGTCAGTCG 58.897 45.833 0.00 0.00 36.88 4.18
2209 2458 2.014857 CAGTCAGTCGATCCCGTTCTA 58.985 52.381 0.00 0.00 37.05 2.10
2210 2459 2.032302 CAGTCAGTCGATCCCGTTCTAG 59.968 54.545 0.00 0.00 37.05 2.43
2211 2460 2.015587 GTCAGTCGATCCCGTTCTAGT 58.984 52.381 0.00 0.00 37.05 2.57
2290 2543 3.603532 CTCTGTTTCTAATGGCAGAGCA 58.396 45.455 7.36 0.00 45.28 4.26
2313 2567 6.349944 GCAGAAGCTGTACTACTACCAGTAAA 60.350 42.308 0.00 0.00 37.91 2.01
2327 2581 8.611051 ACTACCAGTAAATTATGGAGAGAAGT 57.389 34.615 10.38 4.36 39.02 3.01
2328 2582 9.710818 ACTACCAGTAAATTATGGAGAGAAGTA 57.289 33.333 10.38 0.00 39.02 2.24
2329 2583 9.968870 CTACCAGTAAATTATGGAGAGAAGTAC 57.031 37.037 10.38 0.00 39.02 2.73
2330 2584 8.375493 ACCAGTAAATTATGGAGAGAAGTACA 57.625 34.615 10.38 0.00 39.02 2.90
2331 2585 8.258708 ACCAGTAAATTATGGAGAGAAGTACAC 58.741 37.037 10.38 0.00 39.02 2.90
2332 2586 8.478877 CCAGTAAATTATGGAGAGAAGTACACT 58.521 37.037 0.00 0.00 39.02 3.55
2333 2587 9.877178 CAGTAAATTATGGAGAGAAGTACACTT 57.123 33.333 0.00 0.00 39.23 3.16
2417 2968 1.139853 GCTAGAGCAATGTACTGGCCT 59.860 52.381 3.32 0.00 41.59 5.19
2437 2988 6.111382 GGCCTTTAGTTTAATCCGAGTTACT 58.889 40.000 0.00 0.00 0.00 2.24
2438 2989 6.257411 GGCCTTTAGTTTAATCCGAGTTACTC 59.743 42.308 1.64 1.64 0.00 2.59
2439 2990 6.257411 GCCTTTAGTTTAATCCGAGTTACTCC 59.743 42.308 6.80 0.00 0.00 3.85
2442 2993 7.486407 TTAGTTTAATCCGAGTTACTCCCTT 57.514 36.000 6.80 0.99 0.00 3.95
2446 2997 1.915141 TCCGAGTTACTCCCTTCGTT 58.085 50.000 6.80 0.00 0.00 3.85
2447 2998 1.815003 TCCGAGTTACTCCCTTCGTTC 59.185 52.381 6.80 0.00 0.00 3.95
2448 2999 1.135170 CCGAGTTACTCCCTTCGTTCC 60.135 57.143 6.80 0.00 0.00 3.62
2450 3001 1.815003 GAGTTACTCCCTTCGTTCCGA 59.185 52.381 0.00 0.00 0.00 4.55
2451 3002 2.229784 GAGTTACTCCCTTCGTTCCGAA 59.770 50.000 0.00 0.00 43.75 4.30
2452 3003 2.830321 AGTTACTCCCTTCGTTCCGAAT 59.170 45.455 0.00 0.00 44.85 3.34
2453 3004 3.260128 AGTTACTCCCTTCGTTCCGAATT 59.740 43.478 0.00 0.00 44.85 2.17
2454 3005 4.463891 AGTTACTCCCTTCGTTCCGAATTA 59.536 41.667 0.00 0.00 44.85 1.40
2455 3006 3.242549 ACTCCCTTCGTTCCGAATTAC 57.757 47.619 0.00 0.00 44.85 1.89
2456 3007 2.830321 ACTCCCTTCGTTCCGAATTACT 59.170 45.455 0.00 0.00 44.85 2.24
2457 3008 3.260128 ACTCCCTTCGTTCCGAATTACTT 59.740 43.478 0.00 0.00 44.85 2.24
2458 3009 3.592059 TCCCTTCGTTCCGAATTACTTG 58.408 45.455 0.00 0.00 44.85 3.16
2459 3010 3.007182 TCCCTTCGTTCCGAATTACTTGT 59.993 43.478 0.00 0.00 44.85 3.16
2460 3011 3.370061 CCCTTCGTTCCGAATTACTTGTC 59.630 47.826 0.00 0.00 44.85 3.18
2461 3012 4.243270 CCTTCGTTCCGAATTACTTGTCT 58.757 43.478 0.00 0.00 44.85 3.41
2462 3013 4.689345 CCTTCGTTCCGAATTACTTGTCTT 59.311 41.667 0.00 0.00 44.85 3.01
2463 3014 5.865552 CCTTCGTTCCGAATTACTTGTCTTA 59.134 40.000 0.00 0.00 44.85 2.10
2464 3015 6.034683 CCTTCGTTCCGAATTACTTGTCTTAG 59.965 42.308 0.00 0.00 44.85 2.18
2465 3016 6.258230 TCGTTCCGAATTACTTGTCTTAGA 57.742 37.500 0.00 0.00 31.06 2.10
2466 3017 6.860080 TCGTTCCGAATTACTTGTCTTAGAT 58.140 36.000 0.00 0.00 31.06 1.98
2467 3018 7.318141 TCGTTCCGAATTACTTGTCTTAGATT 58.682 34.615 0.00 0.00 31.06 2.40
2468 3019 7.816031 TCGTTCCGAATTACTTGTCTTAGATTT 59.184 33.333 0.00 0.00 31.06 2.17
2469 3020 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
2470 3021 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
2471 3022 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
2472 3023 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
2473 3024 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
2480 3031 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
2481 3032 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2482 3033 8.155821 TGTCTTAGATTTGTCTAGATACGGAG 57.844 38.462 0.00 0.00 0.00 4.63
2483 3034 7.228906 TGTCTTAGATTTGTCTAGATACGGAGG 59.771 40.741 0.00 0.00 0.00 4.30
2484 3035 7.229106 GTCTTAGATTTGTCTAGATACGGAGGT 59.771 40.741 0.00 0.00 0.00 3.85
2485 3036 8.435187 TCTTAGATTTGTCTAGATACGGAGGTA 58.565 37.037 0.00 0.00 0.00 3.08
2486 3037 9.233649 CTTAGATTTGTCTAGATACGGAGGTAT 57.766 37.037 0.00 0.00 42.01 2.73
2500 3051 6.665992 ACGGAGGTATCTAGCATTAAATGA 57.334 37.500 0.00 0.00 0.00 2.57
2501 3052 6.692486 ACGGAGGTATCTAGCATTAAATGAG 58.308 40.000 0.00 0.00 0.00 2.90
2502 3053 6.267928 ACGGAGGTATCTAGCATTAAATGAGT 59.732 38.462 0.00 0.00 0.00 3.41
2503 3054 6.809196 CGGAGGTATCTAGCATTAAATGAGTC 59.191 42.308 0.00 0.00 0.00 3.36
2504 3055 7.309499 CGGAGGTATCTAGCATTAAATGAGTCT 60.309 40.741 0.00 0.00 0.00 3.24
2505 3056 9.026121 GGAGGTATCTAGCATTAAATGAGTCTA 57.974 37.037 0.00 0.00 0.00 2.59
2507 3058 9.815306 AGGTATCTAGCATTAAATGAGTCTAGA 57.185 33.333 0.00 0.00 35.47 2.43
2515 3066 8.031864 AGCATTAAATGAGTCTAGATACATCCG 58.968 37.037 12.66 4.63 0.00 4.18
2516 3067 7.815068 GCATTAAATGAGTCTAGATACATCCGT 59.185 37.037 12.66 6.61 0.00 4.69
2530 3081 4.073293 ACATCCGTATCTGGACAAATCC 57.927 45.455 0.00 0.00 46.48 3.01
2531 3082 5.306937 ATACATCCGTATCTGGACAAATCCA 59.693 40.000 0.00 0.00 42.71 3.41
2532 3083 6.183361 ATACATCCGTATCTGGACAAATCCAA 60.183 38.462 0.00 0.00 42.29 3.53
2533 3084 7.956174 ATACATCCGTATCTGGACAAATCCAAG 60.956 40.741 0.00 0.00 42.29 3.61
2545 3096 6.314784 GGACAAATCCAAGACAAGTAATTCG 58.685 40.000 0.00 0.00 45.47 3.34
2546 3097 6.254281 ACAAATCCAAGACAAGTAATTCGG 57.746 37.500 0.00 0.00 0.00 4.30
2547 3098 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
2548 3099 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
2549 3100 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
2632 3186 0.732880 CGATCGTTGCTGTTCTCGGT 60.733 55.000 7.03 0.00 0.00 4.69
2675 3229 1.417592 CTTCGCATCACGTGTCAGC 59.582 57.895 16.51 16.13 44.19 4.26
2736 3575 2.425143 TTTGATCCCAGTGATGCTCC 57.575 50.000 0.00 0.00 32.41 4.70
2740 3579 1.620819 GATCCCAGTGATGCTCCGTAT 59.379 52.381 0.00 0.00 32.41 3.06
2741 3580 0.752658 TCCCAGTGATGCTCCGTATG 59.247 55.000 0.00 0.00 0.00 2.39
2772 3611 0.592637 CCAGCTGTTTTGCATCACGA 59.407 50.000 13.81 0.00 34.99 4.35
2777 3616 2.797792 GCTGTTTTGCATCACGACCAAA 60.798 45.455 0.00 0.00 0.00 3.28
2844 3685 4.408596 TCTTCAAAACAATTTCCCAGGCTT 59.591 37.500 0.00 0.00 0.00 4.35
2861 3702 0.514691 CTTGAGCTTGAGCAACGTCC 59.485 55.000 5.70 0.00 45.16 4.79
2862 3703 0.179059 TTGAGCTTGAGCAACGTCCA 60.179 50.000 5.70 0.00 45.16 4.02
2863 3704 0.601046 TGAGCTTGAGCAACGTCCAG 60.601 55.000 5.70 0.00 45.16 3.86
2874 3730 4.383861 CGTCCAGCAGGAGCAGCA 62.384 66.667 0.00 0.00 46.92 4.41
2875 3731 2.436292 GTCCAGCAGGAGCAGCAG 60.436 66.667 0.00 0.00 46.92 4.24
2876 3732 4.405671 TCCAGCAGGAGCAGCAGC 62.406 66.667 0.00 0.00 45.49 5.25
2877 3733 4.717313 CCAGCAGGAGCAGCAGCA 62.717 66.667 3.17 0.00 45.49 4.41
2878 3734 3.128188 CAGCAGGAGCAGCAGCAG 61.128 66.667 3.17 0.00 45.49 4.24
2881 3737 3.128188 CAGGAGCAGCAGCAGCAG 61.128 66.667 12.92 0.00 45.49 4.24
3043 3899 3.324108 AAGCCCTACCCGCGGAAA 61.324 61.111 30.73 13.47 0.00 3.13
3085 3941 1.807165 CATCACGGAGCTGACGGTG 60.807 63.158 11.55 9.07 40.66 4.94
3091 3947 1.444553 GGAGCTGACGGTGAAGTCG 60.445 63.158 0.00 0.00 43.70 4.18
3100 3956 0.600255 CGGTGAAGTCGAGCAAGGTT 60.600 55.000 0.00 0.00 0.00 3.50
3133 3989 4.047059 CGGTACCACGACGTGCCT 62.047 66.667 22.46 11.56 36.45 4.75
3139 3995 3.337889 CACGACGTGCCTGTGGTG 61.338 66.667 16.06 6.26 41.15 4.17
3218 4074 4.680237 CGCTCTTCACCACGGCCA 62.680 66.667 2.24 0.00 0.00 5.36
3219 4075 2.743928 GCTCTTCACCACGGCCAG 60.744 66.667 2.24 0.00 0.00 4.85
3317 4173 0.035343 GAAGCTGTCCAAGTACCCCC 60.035 60.000 0.00 0.00 0.00 5.40
3319 4175 0.475828 AGCTGTCCAAGTACCCCCTT 60.476 55.000 0.00 0.00 0.00 3.95
3348 4204 2.425592 CAAGGACGACCAGGTGCA 59.574 61.111 6.71 0.00 38.94 4.57
3407 4263 1.080093 GAGTTCACCATCGACGCCA 60.080 57.895 0.00 0.00 0.00 5.69
3458 4314 1.228003 TTCAACCGGTTCATGCGGT 60.228 52.632 19.24 9.75 37.66 5.68
3460 4316 2.740826 AACCGGTTCATGCGGTCG 60.741 61.111 15.86 3.95 34.63 4.79
3562 4418 1.002134 CCGCACCAGGATGTTCCTT 60.002 57.895 0.00 0.00 46.91 3.36
3577 4433 4.175962 TGTTCCTTAACCTGGAGGAGATT 58.824 43.478 0.00 0.00 42.67 2.40
3655 4511 2.785258 GACATCAACGGCTTCGCC 59.215 61.111 0.00 0.00 46.75 5.54
3938 4794 0.669318 GCGTGGGTTCGAGTTCATCA 60.669 55.000 0.00 0.00 0.00 3.07
4031 4887 3.815809 CTGGACAACCTCAACCAGTAAA 58.184 45.455 0.00 0.00 43.16 2.01
4080 4953 5.176407 ACCATTCGTTTCGTGAAATTTGA 57.824 34.783 0.00 0.00 32.36 2.69
4236 5118 2.301296 CCCTCACATTGTCTGTCTGTCT 59.699 50.000 0.00 0.00 35.29 3.41
4277 5160 5.895636 TTGTCATCCTGCAACGATATTTT 57.104 34.783 0.00 0.00 0.00 1.82
4278 5161 5.895636 TGTCATCCTGCAACGATATTTTT 57.104 34.783 0.00 0.00 0.00 1.94
4312 5196 3.630312 GCACTTTGACTTTCTGGTAACCA 59.370 43.478 0.00 0.00 0.00 3.67
4368 5252 2.479049 CCATCTGAAAAATGCGCTGAGG 60.479 50.000 9.73 0.00 0.00 3.86
4369 5253 1.896220 TCTGAAAAATGCGCTGAGGT 58.104 45.000 9.73 0.00 0.00 3.85
4406 5290 1.681264 CGAATTATTGGAACTGCCCCC 59.319 52.381 0.00 0.00 34.97 5.40
4433 5317 2.489329 CCACATGGTTTGTTGGCTAGAG 59.511 50.000 0.00 0.00 36.00 2.43
4505 5394 3.242220 CGCTGAGCATGTGATTGAGTAAC 60.242 47.826 4.88 0.00 0.00 2.50
4536 5425 3.258123 TGAGCATGTGAGTGTGTAAGCTA 59.742 43.478 0.00 0.00 0.00 3.32
4549 5438 8.396272 AGTGTGTAAGCTAGATCAAATTTTGT 57.604 30.769 8.89 0.00 0.00 2.83
4552 5441 8.845227 TGTGTAAGCTAGATCAAATTTTGTTCA 58.155 29.630 17.94 7.24 32.98 3.18
4588 5477 3.557595 CCGAATGTAAGCTGGATCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
4592 5481 2.186076 GTAAGCTGGATCAACTCGACG 58.814 52.381 0.00 0.00 0.00 5.12
4607 5496 2.604914 CTCGACGGAAATGACCAATGAG 59.395 50.000 0.00 0.00 0.00 2.90
4608 5497 1.665679 CGACGGAAATGACCAATGAGG 59.334 52.381 0.00 0.00 45.67 3.86
4622 5511 5.329035 CCAATGAGGTGGTTTGGATTTAG 57.671 43.478 0.00 0.00 42.02 1.85
4623 5512 4.772100 CCAATGAGGTGGTTTGGATTTAGT 59.228 41.667 0.00 0.00 42.02 2.24
4624 5513 5.949354 CCAATGAGGTGGTTTGGATTTAGTA 59.051 40.000 0.00 0.00 42.02 1.82
4625 5514 6.607198 CCAATGAGGTGGTTTGGATTTAGTAT 59.393 38.462 0.00 0.00 42.02 2.12
4626 5515 7.777910 CCAATGAGGTGGTTTGGATTTAGTATA 59.222 37.037 0.00 0.00 42.02 1.47
4627 5516 8.621286 CAATGAGGTGGTTTGGATTTAGTATAC 58.379 37.037 0.00 0.00 0.00 1.47
4628 5517 6.342906 TGAGGTGGTTTGGATTTAGTATACG 58.657 40.000 0.00 0.00 0.00 3.06
4670 5559 1.725625 CATTTTGTCTGCGCGCGTT 60.726 52.632 32.35 1.15 0.00 4.84
4677 5566 4.643385 CTGCGCGCGTTCGTTTGT 62.643 61.111 32.35 0.00 38.14 2.83
4683 5572 2.862776 CGCGTTCGTTTGTGTCGGT 61.863 57.895 0.00 0.00 0.00 4.69
4685 5574 2.000587 CGTTCGTTTGTGTCGGTGT 58.999 52.632 0.00 0.00 0.00 4.16
4686 5575 1.198767 CGTTCGTTTGTGTCGGTGTA 58.801 50.000 0.00 0.00 0.00 2.90
4690 5579 0.774098 CGTTTGTGTCGGTGTAGACG 59.226 55.000 0.00 0.00 43.70 4.18
4746 5635 2.654912 CGTTCGCTTTTCGTCCGCT 61.655 57.895 0.00 0.00 39.67 5.52
4759 5648 1.003839 TCCGCTTGCCGACTCATTT 60.004 52.632 0.00 0.00 40.02 2.32
4812 5701 3.026311 GACACGAAACGGACGCGT 61.026 61.111 13.85 13.85 39.04 6.01
4876 5767 0.481567 CATTGGCCATCCTCTCCCAT 59.518 55.000 6.09 0.00 0.00 4.00
4882 5773 0.769873 CCATCCTCTCCCATCCCAAG 59.230 60.000 0.00 0.00 0.00 3.61
4896 5787 3.485463 TCCCAAGATCGACAACAAACT 57.515 42.857 0.00 0.00 0.00 2.66
4957 5848 3.888460 TGCCTCTGCCAGCAACCA 61.888 61.111 0.00 0.00 35.69 3.67
4983 5875 1.002134 CACATCTTCCCCCAACGCT 60.002 57.895 0.00 0.00 0.00 5.07
4986 5878 2.606587 ATCTTCCCCCAACGCTGCT 61.607 57.895 0.00 0.00 0.00 4.24
5022 5915 1.287815 CACCACCGTCTCGCTGTTA 59.712 57.895 0.00 0.00 0.00 2.41
5119 6055 2.254350 CGCCAACACTCTCGTCGA 59.746 61.111 0.00 0.00 0.00 4.20
5126 6062 4.755614 ACTCTCGTCGAACGCCGC 62.756 66.667 0.00 0.00 42.21 6.53
5140 6076 4.498520 CCGCCACGCTCGTCAGAT 62.499 66.667 0.00 0.00 0.00 2.90
5141 6077 3.250323 CGCCACGCTCGTCAGATG 61.250 66.667 0.00 0.00 0.00 2.90
5142 6078 3.558411 GCCACGCTCGTCAGATGC 61.558 66.667 0.00 0.00 0.00 3.91
5143 6079 2.887568 CCACGCTCGTCAGATGCC 60.888 66.667 0.00 0.00 0.00 4.40
5144 6080 2.182791 CACGCTCGTCAGATGCCT 59.817 61.111 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.866379 AAGCGGGCATGCCACTTCA 62.866 57.895 36.56 0.00 37.98 3.02
1 2 3.064324 AAGCGGGCATGCCACTTC 61.064 61.111 36.56 21.24 37.98 3.01
2 3 3.376078 CAAGCGGGCATGCCACTT 61.376 61.111 36.56 32.35 37.98 3.16
13 14 6.166279 TGCTAATTCTATAGGATTCAAGCGG 58.834 40.000 17.93 4.36 0.00 5.52
15 16 9.224267 TCATTGCTAATTCTATAGGATTCAAGC 57.776 33.333 16.92 16.92 0.00 4.01
68 69 8.536175 TCCACTCCAACTTTCTTTTACAATTTT 58.464 29.630 0.00 0.00 0.00 1.82
69 70 8.073467 TCCACTCCAACTTTCTTTTACAATTT 57.927 30.769 0.00 0.00 0.00 1.82
81 82 9.981460 AGAAAATCTAATATCCACTCCAACTTT 57.019 29.630 0.00 0.00 0.00 2.66
110 111 9.672673 CCTATGGAATCGTCTGGAATATATTTT 57.327 33.333 0.00 0.00 0.00 1.82
111 112 9.046846 TCCTATGGAATCGTCTGGAATATATTT 57.953 33.333 0.00 0.00 0.00 1.40
112 113 8.609617 TCCTATGGAATCGTCTGGAATATATT 57.390 34.615 0.00 0.00 0.00 1.28
113 114 8.609617 TTCCTATGGAATCGTCTGGAATATAT 57.390 34.615 0.00 0.00 36.71 0.86
114 115 8.430573 TTTCCTATGGAATCGTCTGGAATATA 57.569 34.615 0.00 0.00 41.71 0.86
115 116 6.935240 TTCCTATGGAATCGTCTGGAATAT 57.065 37.500 0.00 0.00 36.71 1.28
116 117 6.740944 TTTCCTATGGAATCGTCTGGAATA 57.259 37.500 0.00 0.00 41.71 1.75
117 118 5.630415 TTTCCTATGGAATCGTCTGGAAT 57.370 39.130 0.00 0.00 41.71 3.01
118 119 5.429681 TTTTCCTATGGAATCGTCTGGAA 57.570 39.130 0.00 0.00 41.71 3.53
119 120 5.429681 TTTTTCCTATGGAATCGTCTGGA 57.570 39.130 0.00 0.00 41.71 3.86
120 121 6.238759 GGAATTTTTCCTATGGAATCGTCTGG 60.239 42.308 0.00 0.00 46.57 3.86
121 122 6.729187 GGAATTTTTCCTATGGAATCGTCTG 58.271 40.000 0.00 0.00 46.57 3.51
122 123 6.944234 GGAATTTTTCCTATGGAATCGTCT 57.056 37.500 0.00 0.00 46.57 4.18
137 138 9.826574 CATGGATTGAATCACATAGGAATTTTT 57.173 29.630 7.56 0.00 0.00 1.94
138 139 9.204337 TCATGGATTGAATCACATAGGAATTTT 57.796 29.630 7.56 0.00 0.00 1.82
139 140 8.771521 TCATGGATTGAATCACATAGGAATTT 57.228 30.769 7.56 0.00 0.00 1.82
140 141 8.771521 TTCATGGATTGAATCACATAGGAATT 57.228 30.769 7.56 0.00 39.44 2.17
154 155 4.933134 TGGTCCTTTGATTCATGGATTGA 58.067 39.130 10.74 0.00 0.00 2.57
155 156 5.047164 TGTTGGTCCTTTGATTCATGGATTG 60.047 40.000 10.74 0.00 0.00 2.67
156 157 5.085920 TGTTGGTCCTTTGATTCATGGATT 58.914 37.500 10.74 0.00 0.00 3.01
157 158 4.676109 TGTTGGTCCTTTGATTCATGGAT 58.324 39.130 10.74 0.00 0.00 3.41
158 159 4.111255 TGTTGGTCCTTTGATTCATGGA 57.889 40.909 5.20 5.20 0.00 3.41
159 160 4.870123 TTGTTGGTCCTTTGATTCATGG 57.130 40.909 0.00 0.00 0.00 3.66
160 161 5.010922 TCCTTTGTTGGTCCTTTGATTCATG 59.989 40.000 0.00 0.00 0.00 3.07
161 162 5.147032 TCCTTTGTTGGTCCTTTGATTCAT 58.853 37.500 0.00 0.00 0.00 2.57
162 163 4.541705 TCCTTTGTTGGTCCTTTGATTCA 58.458 39.130 0.00 0.00 0.00 2.57
163 164 5.529581 TTCCTTTGTTGGTCCTTTGATTC 57.470 39.130 0.00 0.00 0.00 2.52
164 165 5.948742 TTTCCTTTGTTGGTCCTTTGATT 57.051 34.783 0.00 0.00 0.00 2.57
165 166 5.188751 TGTTTTCCTTTGTTGGTCCTTTGAT 59.811 36.000 0.00 0.00 0.00 2.57
166 167 4.528596 TGTTTTCCTTTGTTGGTCCTTTGA 59.471 37.500 0.00 0.00 0.00 2.69
167 168 4.826556 TGTTTTCCTTTGTTGGTCCTTTG 58.173 39.130 0.00 0.00 0.00 2.77
168 169 5.396324 GGATGTTTTCCTTTGTTGGTCCTTT 60.396 40.000 0.00 0.00 41.78 3.11
169 170 4.100963 GGATGTTTTCCTTTGTTGGTCCTT 59.899 41.667 0.00 0.00 41.78 3.36
170 171 3.641436 GGATGTTTTCCTTTGTTGGTCCT 59.359 43.478 0.00 0.00 41.78 3.85
171 172 3.990092 GGATGTTTTCCTTTGTTGGTCC 58.010 45.455 0.00 0.00 41.78 4.46
182 183 8.753133 AGGATTGAAATTCTAAGGATGTTTTCC 58.247 33.333 0.00 0.00 45.85 3.13
183 184 9.794685 GAGGATTGAAATTCTAAGGATGTTTTC 57.205 33.333 0.00 0.00 0.00 2.29
184 185 8.753133 GGAGGATTGAAATTCTAAGGATGTTTT 58.247 33.333 0.00 0.00 0.00 2.43
185 186 7.895429 TGGAGGATTGAAATTCTAAGGATGTTT 59.105 33.333 0.00 0.00 0.00 2.83
186 187 7.413446 TGGAGGATTGAAATTCTAAGGATGTT 58.587 34.615 0.00 0.00 0.00 2.71
187 188 6.973642 TGGAGGATTGAAATTCTAAGGATGT 58.026 36.000 0.00 0.00 0.00 3.06
188 189 7.285566 TCTGGAGGATTGAAATTCTAAGGATG 58.714 38.462 0.00 0.00 0.00 3.51
189 190 7.457380 TCTGGAGGATTGAAATTCTAAGGAT 57.543 36.000 0.00 0.00 0.00 3.24
190 191 6.891306 TCTGGAGGATTGAAATTCTAAGGA 57.109 37.500 0.00 0.00 0.00 3.36
191 192 7.944729 TTTCTGGAGGATTGAAATTCTAAGG 57.055 36.000 0.00 0.00 0.00 2.69
192 193 8.628280 GGATTTCTGGAGGATTGAAATTCTAAG 58.372 37.037 0.00 0.00 39.56 2.18
193 194 8.339247 AGGATTTCTGGAGGATTGAAATTCTAA 58.661 33.333 6.67 0.00 41.54 2.10
194 195 7.776969 CAGGATTTCTGGAGGATTGAAATTCTA 59.223 37.037 7.80 0.00 41.46 2.10
195 196 6.606395 CAGGATTTCTGGAGGATTGAAATTCT 59.394 38.462 0.00 0.00 43.11 2.40
196 197 6.682362 GCAGGATTTCTGGAGGATTGAAATTC 60.682 42.308 0.00 0.00 43.54 2.17
197 198 5.128335 GCAGGATTTCTGGAGGATTGAAATT 59.872 40.000 0.00 0.00 43.54 1.82
198 199 4.648307 GCAGGATTTCTGGAGGATTGAAAT 59.352 41.667 0.00 0.00 43.54 2.17
199 200 4.019174 GCAGGATTTCTGGAGGATTGAAA 58.981 43.478 0.00 0.00 43.54 2.69
200 201 3.010472 TGCAGGATTTCTGGAGGATTGAA 59.990 43.478 0.00 0.00 43.54 2.69
201 202 2.577563 TGCAGGATTTCTGGAGGATTGA 59.422 45.455 0.00 0.00 43.54 2.57
202 203 3.008835 TGCAGGATTTCTGGAGGATTG 57.991 47.619 0.00 0.00 43.54 2.67
203 204 3.744940 TTGCAGGATTTCTGGAGGATT 57.255 42.857 0.00 0.00 44.58 3.01
204 205 3.011032 ACTTTGCAGGATTTCTGGAGGAT 59.989 43.478 0.00 0.00 44.58 3.24
205 206 2.376518 ACTTTGCAGGATTTCTGGAGGA 59.623 45.455 0.00 0.00 44.58 3.71
206 207 2.800250 ACTTTGCAGGATTTCTGGAGG 58.200 47.619 0.00 0.00 44.58 4.30
207 208 3.192212 GGAACTTTGCAGGATTTCTGGAG 59.808 47.826 0.00 0.00 44.58 3.86
208 209 3.157087 GGAACTTTGCAGGATTTCTGGA 58.843 45.455 0.00 0.00 43.54 3.86
209 210 3.160269 AGGAACTTTGCAGGATTTCTGG 58.840 45.455 0.00 0.00 38.97 3.86
230 231 4.526650 GGTTAAGGGCTCCTTTGATTCAAA 59.473 41.667 11.19 11.19 41.69 2.69
231 232 4.086457 GGTTAAGGGCTCCTTTGATTCAA 58.914 43.478 11.15 0.00 41.69 2.69
232 233 3.697166 GGTTAAGGGCTCCTTTGATTCA 58.303 45.455 11.15 0.00 41.69 2.57
233 234 2.683362 CGGTTAAGGGCTCCTTTGATTC 59.317 50.000 11.15 0.67 41.69 2.52
234 235 2.620627 CCGGTTAAGGGCTCCTTTGATT 60.621 50.000 11.15 0.00 41.69 2.57
235 236 1.064685 CCGGTTAAGGGCTCCTTTGAT 60.065 52.381 11.15 0.00 41.69 2.57
236 237 0.326927 CCGGTTAAGGGCTCCTTTGA 59.673 55.000 11.15 0.19 41.69 2.69
237 238 0.037734 ACCGGTTAAGGGCTCCTTTG 59.962 55.000 0.00 1.64 41.69 2.77
238 239 0.327259 GACCGGTTAAGGGCTCCTTT 59.673 55.000 9.42 0.00 41.69 3.11
239 240 0.838987 TGACCGGTTAAGGGCTCCTT 60.839 55.000 9.42 10.76 46.63 3.36
240 241 0.838987 TTGACCGGTTAAGGGCTCCT 60.839 55.000 9.42 0.00 40.90 3.69
241 242 0.675837 GTTGACCGGTTAAGGGCTCC 60.676 60.000 12.77 0.00 40.90 4.70
242 243 0.323957 AGTTGACCGGTTAAGGGCTC 59.676 55.000 12.77 0.07 40.90 4.70
243 244 0.769247 AAGTTGACCGGTTAAGGGCT 59.231 50.000 12.77 3.41 40.90 5.19
244 245 1.268625 CAAAGTTGACCGGTTAAGGGC 59.731 52.381 12.77 0.85 40.61 5.19
245 246 2.578786 ACAAAGTTGACCGGTTAAGGG 58.421 47.619 12.77 5.02 35.02 3.95
246 247 3.881089 AGAACAAAGTTGACCGGTTAAGG 59.119 43.478 12.77 5.37 37.30 2.69
247 248 5.296035 AGAAGAACAAAGTTGACCGGTTAAG 59.704 40.000 12.77 3.27 0.00 1.85
248 249 5.187687 AGAAGAACAAAGTTGACCGGTTAA 58.812 37.500 9.42 8.56 0.00 2.01
249 250 4.773013 AGAAGAACAAAGTTGACCGGTTA 58.227 39.130 9.42 0.00 0.00 2.85
250 251 3.617284 AGAAGAACAAAGTTGACCGGTT 58.383 40.909 9.42 0.00 0.00 4.44
251 252 3.277142 AGAAGAACAAAGTTGACCGGT 57.723 42.857 6.92 6.92 0.00 5.28
252 253 4.814771 ACTAAGAAGAACAAAGTTGACCGG 59.185 41.667 0.00 0.00 0.00 5.28
253 254 5.986004 ACTAAGAAGAACAAAGTTGACCG 57.014 39.130 0.00 0.00 0.00 4.79
254 255 9.052759 TCATAACTAAGAAGAACAAAGTTGACC 57.947 33.333 0.00 0.00 32.85 4.02
281 282 7.035612 ACGAGCCAAAAGATTTATCATTTTCC 58.964 34.615 0.00 0.00 0.00 3.13
287 288 8.573035 AGTTTAAACGAGCCAAAAGATTTATCA 58.427 29.630 12.54 0.00 0.00 2.15
318 319 2.900716 TGTTGCTGCTGTGTACTGTA 57.099 45.000 0.00 0.00 0.00 2.74
319 320 2.036958 TTGTTGCTGCTGTGTACTGT 57.963 45.000 0.00 0.00 0.00 3.55
320 321 2.719798 GTTTGTTGCTGCTGTGTACTG 58.280 47.619 0.00 0.00 0.00 2.74
321 322 1.330521 CGTTTGTTGCTGCTGTGTACT 59.669 47.619 0.00 0.00 0.00 2.73
322 323 1.063469 ACGTTTGTTGCTGCTGTGTAC 59.937 47.619 0.00 0.00 0.00 2.90
323 324 1.374560 ACGTTTGTTGCTGCTGTGTA 58.625 45.000 0.00 0.00 0.00 2.90
325 326 1.583404 GAAACGTTTGTTGCTGCTGTG 59.417 47.619 20.10 0.00 38.62 3.66
326 327 1.469079 GGAAACGTTTGTTGCTGCTGT 60.469 47.619 20.10 0.00 38.62 4.40
327 328 1.199624 GGAAACGTTTGTTGCTGCTG 58.800 50.000 20.10 0.00 38.62 4.41
328 329 3.641031 GGAAACGTTTGTTGCTGCT 57.359 47.368 20.10 0.00 38.62 4.24
348 353 1.895707 CCGGCTGGGCATCTCATTC 60.896 63.158 2.57 0.00 0.00 2.67
370 375 3.011517 AGTGGGATGGCTCGGCTT 61.012 61.111 0.00 0.00 0.00 4.35
381 386 2.674754 GCCGGATTTCCAGTGGGA 59.325 61.111 5.05 0.00 43.03 4.37
387 392 4.483243 GCCTCGGCCGGATTTCCA 62.483 66.667 27.83 2.05 35.14 3.53
398 403 2.017783 TTTTTCGTCGTCGCCTCGG 61.018 57.895 0.00 0.00 36.96 4.63
399 404 3.529504 TTTTTCGTCGTCGCCTCG 58.470 55.556 0.00 0.00 36.96 4.63
441 451 1.450312 CGCAACCCTCCAGCTAAGG 60.450 63.158 7.26 7.26 0.00 2.69
444 454 2.606519 ACCGCAACCCTCCAGCTA 60.607 61.111 0.00 0.00 0.00 3.32
445 455 4.335647 CACCGCAACCCTCCAGCT 62.336 66.667 0.00 0.00 0.00 4.24
478 488 3.562779 TTTCGCGTGTCCGGACTCC 62.563 63.158 33.39 22.50 33.68 3.85
479 489 2.049802 TTTCGCGTGTCCGGACTC 60.050 61.111 33.39 28.39 33.68 3.36
480 490 2.355481 GTTTCGCGTGTCCGGACT 60.355 61.111 33.39 0.00 33.68 3.85
481 491 2.654912 CTGTTTCGCGTGTCCGGAC 61.655 63.158 28.17 28.17 33.68 4.79
482 492 2.355363 CTGTTTCGCGTGTCCGGA 60.355 61.111 5.77 0.00 33.68 5.14
572 584 1.165284 GCGAGGAGGACGGGTAGTAG 61.165 65.000 0.00 0.00 0.00 2.57
576 588 2.124403 GAGCGAGGAGGACGGGTA 60.124 66.667 0.00 0.00 0.00 3.69
579 591 2.438614 TCAGAGCGAGGAGGACGG 60.439 66.667 0.00 0.00 0.00 4.79
600 612 0.889638 TTCCTCTCGACGAGTGCTGT 60.890 55.000 23.41 0.00 38.11 4.40
735 754 1.816863 TTGCCTTTCCGCTCGTCTCT 61.817 55.000 0.00 0.00 0.00 3.10
742 762 2.985847 GTGCCTTGCCTTTCCGCT 60.986 61.111 0.00 0.00 0.00 5.52
887 927 1.273896 GGAGGGAGGGAAGAAGGAAGA 60.274 57.143 0.00 0.00 0.00 2.87
969 1009 2.405594 CGGAGAAGGAGAGACGCG 59.594 66.667 3.53 3.53 0.00 6.01
981 1021 0.614697 TGGTGGAAGATGAGCGGAGA 60.615 55.000 0.00 0.00 0.00 3.71
1004 1062 3.702048 CAAGGAACGGGGCGGAGA 61.702 66.667 0.00 0.00 0.00 3.71
1012 1070 3.423154 GAGGCGTGCAAGGAACGG 61.423 66.667 0.79 0.00 41.31 4.44
1034 1096 2.967397 CCTAACACGCACGGAGGA 59.033 61.111 0.00 0.00 0.00 3.71
1035 1097 2.813908 GCCTAACACGCACGGAGG 60.814 66.667 0.00 0.00 0.00 4.30
1045 1107 0.331954 AGGTCTCTCTCGGCCTAACA 59.668 55.000 0.00 0.00 0.00 2.41
1048 1110 1.227664 CCAGGTCTCTCTCGGCCTA 59.772 63.158 0.00 0.00 0.00 3.93
1049 1111 2.043450 CCAGGTCTCTCTCGGCCT 60.043 66.667 0.00 0.00 0.00 5.19
1050 1112 2.363147 ACCAGGTCTCTCTCGGCC 60.363 66.667 0.00 0.00 0.00 6.13
1051 1113 2.716017 CCACCAGGTCTCTCTCGGC 61.716 68.421 0.00 0.00 0.00 5.54
1052 1114 2.716017 GCCACCAGGTCTCTCTCGG 61.716 68.421 0.00 0.00 37.19 4.63
1053 1115 2.716017 GGCCACCAGGTCTCTCTCG 61.716 68.421 0.00 0.00 36.28 4.04
1054 1116 1.610673 TGGCCACCAGGTCTCTCTC 60.611 63.158 0.00 0.00 41.31 3.20
1055 1117 1.915769 GTGGCCACCAGGTCTCTCT 60.916 63.158 26.31 0.00 41.31 3.10
1060 1122 2.257409 ATCATCGTGGCCACCAGGTC 62.257 60.000 29.95 4.29 39.97 3.85
1061 1123 2.300967 ATCATCGTGGCCACCAGGT 61.301 57.895 29.95 13.38 39.97 4.00
1063 1125 0.392863 TTCATCATCGTGGCCACCAG 60.393 55.000 29.95 19.07 32.34 4.00
1064 1126 0.392863 CTTCATCATCGTGGCCACCA 60.393 55.000 29.95 19.24 0.00 4.17
1065 1127 1.097547 CCTTCATCATCGTGGCCACC 61.098 60.000 29.95 12.55 0.00 4.61
1066 1128 1.718757 GCCTTCATCATCGTGGCCAC 61.719 60.000 26.78 26.78 37.81 5.01
1067 1129 1.451927 GCCTTCATCATCGTGGCCA 60.452 57.895 0.00 0.00 37.81 5.36
1068 1130 2.537560 CGCCTTCATCATCGTGGCC 61.538 63.158 0.00 0.00 40.40 5.36
1069 1131 2.537560 CCGCCTTCATCATCGTGGC 61.538 63.158 0.00 0.00 40.14 5.01
1070 1132 1.889105 CCCGCCTTCATCATCGTGG 60.889 63.158 0.00 0.00 0.00 4.94
1071 1133 1.889105 CCCCGCCTTCATCATCGTG 60.889 63.158 0.00 0.00 0.00 4.35
1072 1134 2.505982 CCCCGCCTTCATCATCGT 59.494 61.111 0.00 0.00 0.00 3.73
1150 1212 2.108514 CGACAACGATGGCCAGCAT 61.109 57.895 22.95 1.18 42.66 3.79
1159 1221 3.116300 CGATGAAGAATCCGACAACGAT 58.884 45.455 0.00 0.00 42.66 3.73
1164 1226 2.099263 GGAGACGATGAAGAATCCGACA 59.901 50.000 0.00 0.00 30.80 4.35
1170 1232 2.432510 GGTGAGGGAGACGATGAAGAAT 59.567 50.000 0.00 0.00 0.00 2.40
1259 1324 3.119209 AGTCCCGAGAAACGAATAAGGAC 60.119 47.826 0.00 0.00 43.44 3.85
1283 1348 2.002586 CGCTGTGACCAGTAGAATTGG 58.997 52.381 0.00 0.00 41.02 3.16
1331 1404 5.340667 CAGTCGGTTAGTTACAGTTCGTTAC 59.659 44.000 0.00 0.00 0.00 2.50
1445 1521 2.671682 GTGGAGGTCTTCTGGGCC 59.328 66.667 0.00 0.00 0.00 5.80
1555 1635 0.908198 CACCTGGAGGAAGGAAGGAG 59.092 60.000 0.00 0.00 40.02 3.69
1702 1799 3.423162 CTCTTCCTCGCCGCCTCTG 62.423 68.421 0.00 0.00 0.00 3.35
1717 1814 0.339859 TCAGCACCCTATGGTCCTCT 59.660 55.000 0.00 0.00 45.57 3.69
1841 1938 1.744456 CGCTTCCTAATTACGGGCCAA 60.744 52.381 4.39 0.00 0.00 4.52
1848 1945 4.361420 GGACAGAGACGCTTCCTAATTAC 58.639 47.826 0.00 0.00 0.00 1.89
1853 1950 0.039180 TGGGACAGAGACGCTTCCTA 59.961 55.000 7.13 0.59 0.00 2.94
1943 2051 0.944311 TTCCAAGCTCGAAGCACGAC 60.944 55.000 9.09 1.26 45.56 4.34
1953 2061 2.361737 GCCCCAGGTTCCAAGCTC 60.362 66.667 0.00 0.00 33.87 4.09
1954 2062 2.860971 AGCCCCAGGTTCCAAGCT 60.861 61.111 0.00 0.00 37.19 3.74
1955 2063 2.677875 CAGCCCCAGGTTCCAAGC 60.678 66.667 0.00 0.00 0.00 4.01
1956 2064 1.001641 CTCAGCCCCAGGTTCCAAG 60.002 63.158 0.00 0.00 0.00 3.61
1957 2065 0.846427 ATCTCAGCCCCAGGTTCCAA 60.846 55.000 0.00 0.00 0.00 3.53
1958 2066 1.229951 ATCTCAGCCCCAGGTTCCA 60.230 57.895 0.00 0.00 0.00 3.53
1959 2067 1.225704 CATCTCAGCCCCAGGTTCC 59.774 63.158 0.00 0.00 0.00 3.62
1989 2097 0.613853 TTCCTCTCCCCACCTACACG 60.614 60.000 0.00 0.00 0.00 4.49
2033 2151 2.048222 TTGGCGTGCTTCTCCTCG 60.048 61.111 0.00 0.00 0.00 4.63
2198 2447 3.896272 ACAGGGAATACTAGAACGGGATC 59.104 47.826 0.00 0.00 0.00 3.36
2288 2541 3.444388 ACTGGTAGTAGTACAGCTTCTGC 59.556 47.826 9.89 0.00 34.37 4.26
2290 2543 7.957992 ATTTACTGGTAGTAGTACAGCTTCT 57.042 36.000 9.89 0.00 33.14 2.85
2307 2561 9.877178 AAGTGTACTTCTCTCCATAATTTACTG 57.123 33.333 0.00 0.00 0.00 2.74
2313 2567 9.924010 ACTACTAAGTGTACTTCTCTCCATAAT 57.076 33.333 0.00 0.00 37.40 1.28
2330 2584 3.497332 TCTGACAGCACCACTACTAAGT 58.503 45.455 0.00 0.00 35.91 2.24
2331 2585 3.508012 ACTCTGACAGCACCACTACTAAG 59.492 47.826 0.00 0.00 0.00 2.18
2332 2586 3.497332 ACTCTGACAGCACCACTACTAA 58.503 45.455 0.00 0.00 0.00 2.24
2333 2587 3.156288 ACTCTGACAGCACCACTACTA 57.844 47.619 0.00 0.00 0.00 1.82
2334 2588 2.002505 ACTCTGACAGCACCACTACT 57.997 50.000 0.00 0.00 0.00 2.57
2335 2589 3.082548 TCTACTCTGACAGCACCACTAC 58.917 50.000 0.00 0.00 0.00 2.73
2336 2590 3.434940 TCTACTCTGACAGCACCACTA 57.565 47.619 0.00 0.00 0.00 2.74
2337 2591 2.294449 TCTACTCTGACAGCACCACT 57.706 50.000 0.00 0.00 0.00 4.00
2343 2609 4.233789 CACTTCAGTTCTACTCTGACAGC 58.766 47.826 0.00 0.00 40.90 4.40
2403 2951 4.783764 AAACTAAAGGCCAGTACATTGC 57.216 40.909 5.01 0.00 0.00 3.56
2417 2968 7.486407 AGGGAGTAACTCGGATTAAACTAAA 57.514 36.000 0.00 0.00 0.00 1.85
2446 2997 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
2447 2998 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
2454 3005 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
2455 3006 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
2456 3007 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2457 3008 7.228906 CCTCCGTATCTAGACAAATCTAAGACA 59.771 40.741 0.00 0.00 36.98 3.41
2458 3009 7.229106 ACCTCCGTATCTAGACAAATCTAAGAC 59.771 40.741 0.00 0.00 36.98 3.01
2459 3010 7.288560 ACCTCCGTATCTAGACAAATCTAAGA 58.711 38.462 0.00 0.00 36.98 2.10
2460 3011 7.513371 ACCTCCGTATCTAGACAAATCTAAG 57.487 40.000 0.00 0.00 36.98 2.18
2461 3012 9.228949 GATACCTCCGTATCTAGACAAATCTAA 57.771 37.037 0.00 0.00 45.11 2.10
2462 3013 8.789825 GATACCTCCGTATCTAGACAAATCTA 57.210 38.462 0.00 0.00 45.11 1.98
2463 3014 7.690952 GATACCTCCGTATCTAGACAAATCT 57.309 40.000 0.00 0.00 45.11 2.40
2475 3026 8.362464 TCATTTAATGCTAGATACCTCCGTAT 57.638 34.615 0.00 0.00 37.92 3.06
2476 3027 7.450634 ACTCATTTAATGCTAGATACCTCCGTA 59.549 37.037 0.00 0.00 0.00 4.02
2477 3028 6.267928 ACTCATTTAATGCTAGATACCTCCGT 59.732 38.462 0.00 0.00 0.00 4.69
2478 3029 6.692486 ACTCATTTAATGCTAGATACCTCCG 58.308 40.000 0.00 0.00 0.00 4.63
2479 3030 7.902087 AGACTCATTTAATGCTAGATACCTCC 58.098 38.462 0.00 0.00 0.00 4.30
2481 3032 9.815306 TCTAGACTCATTTAATGCTAGATACCT 57.185 33.333 13.15 3.95 31.97 3.08
2489 3040 8.031864 CGGATGTATCTAGACTCATTTAATGCT 58.968 37.037 11.25 0.00 0.00 3.79
2490 3041 7.815068 ACGGATGTATCTAGACTCATTTAATGC 59.185 37.037 11.25 1.07 0.00 3.56
2507 3058 5.306937 TGGATTTGTCCAGATACGGATGTAT 59.693 40.000 0.00 0.00 38.21 2.29
2508 3059 4.651962 TGGATTTGTCCAGATACGGATGTA 59.348 41.667 0.00 0.00 37.41 2.29
2509 3060 3.454447 TGGATTTGTCCAGATACGGATGT 59.546 43.478 0.00 0.00 37.41 3.06
2510 3061 4.071961 TGGATTTGTCCAGATACGGATG 57.928 45.455 0.00 0.00 37.41 3.51
2511 3062 4.408921 TCTTGGATTTGTCCAGATACGGAT 59.591 41.667 0.00 0.00 41.35 4.18
2512 3063 3.772572 TCTTGGATTTGTCCAGATACGGA 59.227 43.478 0.00 0.00 41.35 4.69
2513 3064 3.871594 GTCTTGGATTTGTCCAGATACGG 59.128 47.826 0.00 0.00 41.35 4.02
2514 3065 4.503910 TGTCTTGGATTTGTCCAGATACG 58.496 43.478 0.00 0.00 41.35 3.06
2515 3066 5.940470 ACTTGTCTTGGATTTGTCCAGATAC 59.060 40.000 0.00 0.00 41.35 2.24
2516 3067 6.126863 ACTTGTCTTGGATTTGTCCAGATA 57.873 37.500 0.00 0.00 41.35 1.98
2517 3068 4.990526 ACTTGTCTTGGATTTGTCCAGAT 58.009 39.130 0.00 0.00 41.35 2.90
2518 3069 4.437682 ACTTGTCTTGGATTTGTCCAGA 57.562 40.909 0.00 0.00 41.35 3.86
2519 3070 6.824305 ATTACTTGTCTTGGATTTGTCCAG 57.176 37.500 0.00 0.00 41.35 3.86
2520 3071 6.072728 CGAATTACTTGTCTTGGATTTGTCCA 60.073 38.462 0.00 0.00 38.14 4.02
2521 3072 6.314784 CGAATTACTTGTCTTGGATTTGTCC 58.685 40.000 0.00 0.00 0.00 4.02
2522 3073 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
2523 3074 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
2524 3075 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
2525 3076 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
2526 3077 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
2527 3078 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
2528 3079 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2529 3080 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
2530 3081 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
2531 3082 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
2532 3083 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
2533 3084 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2534 3085 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2535 3086 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2536 3087 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2537 3088 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2538 3089 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2539 3090 1.479323 CACTCCCTCCGTTCCGAATTA 59.521 52.381 0.00 0.00 0.00 1.40
2540 3091 0.249398 CACTCCCTCCGTTCCGAATT 59.751 55.000 0.00 0.00 0.00 2.17
2541 3092 0.613853 TCACTCCCTCCGTTCCGAAT 60.614 55.000 0.00 0.00 0.00 3.34
2542 3093 0.828762 TTCACTCCCTCCGTTCCGAA 60.829 55.000 0.00 0.00 0.00 4.30
2543 3094 0.828762 TTTCACTCCCTCCGTTCCGA 60.829 55.000 0.00 0.00 0.00 4.55
2544 3095 0.034337 TTTTCACTCCCTCCGTTCCG 59.966 55.000 0.00 0.00 0.00 4.30
2545 3096 2.491675 ATTTTCACTCCCTCCGTTCC 57.508 50.000 0.00 0.00 0.00 3.62
2546 3097 4.182339 GTCTATTTTCACTCCCTCCGTTC 58.818 47.826 0.00 0.00 0.00 3.95
2547 3098 3.055312 GGTCTATTTTCACTCCCTCCGTT 60.055 47.826 0.00 0.00 0.00 4.44
2548 3099 2.500504 GGTCTATTTTCACTCCCTCCGT 59.499 50.000 0.00 0.00 0.00 4.69
2549 3100 2.481449 CGGTCTATTTTCACTCCCTCCG 60.481 54.545 0.00 0.00 0.00 4.63
2550 3101 2.742204 GCGGTCTATTTTCACTCCCTCC 60.742 54.545 0.00 0.00 0.00 4.30
2551 3102 2.552031 GCGGTCTATTTTCACTCCCTC 58.448 52.381 0.00 0.00 0.00 4.30
2552 3103 1.209747 GGCGGTCTATTTTCACTCCCT 59.790 52.381 0.00 0.00 0.00 4.20
2553 3104 1.065709 TGGCGGTCTATTTTCACTCCC 60.066 52.381 0.00 0.00 0.00 4.30
2554 3105 2.396590 TGGCGGTCTATTTTCACTCC 57.603 50.000 0.00 0.00 0.00 3.85
2555 3106 3.487544 GCATTGGCGGTCTATTTTCACTC 60.488 47.826 0.00 0.00 0.00 3.51
2632 3186 2.410322 AATGCTCCAAGTGGGCGTCA 62.410 55.000 0.00 0.00 35.16 4.35
2675 3229 2.411676 CGATCATGTAGGAGTACGAGCG 60.412 54.545 0.00 0.00 30.95 5.03
2736 3575 0.752658 TGGATCAGGGTGAGCATACG 59.247 55.000 0.00 0.00 33.81 3.06
2740 3579 1.614525 AGCTGGATCAGGGTGAGCA 60.615 57.895 0.00 0.00 33.81 4.26
2741 3580 1.153208 CAGCTGGATCAGGGTGAGC 60.153 63.158 5.57 0.00 33.41 4.26
2772 3611 7.967908 TGGTGGTATGTTCATTAAAATTTGGT 58.032 30.769 0.00 0.00 0.00 3.67
2844 3685 0.601046 CTGGACGTTGCTCAAGCTCA 60.601 55.000 3.32 0.00 42.66 4.26
2861 3702 3.128188 CTGCTGCTGCTCCTGCTG 61.128 66.667 17.00 1.17 40.48 4.41
2876 3732 2.750637 CTTGCTCCCCTGCTGCTG 60.751 66.667 0.00 0.00 0.00 4.41
2877 3733 4.737177 GCTTGCTCCCCTGCTGCT 62.737 66.667 0.00 0.00 33.25 4.24
2911 3767 2.356673 ACGTTCGCCCGGAAGTTC 60.357 61.111 0.73 0.00 34.69 3.01
2971 3827 1.639298 GCTCCATGAACAGCACCGAC 61.639 60.000 0.00 0.00 35.56 4.79
3043 3899 2.992114 AGGCAGAACTCGTCGCCT 60.992 61.111 0.00 0.00 45.51 5.52
3133 3989 1.256812 TGAGCGAGAAGATCACCACA 58.743 50.000 0.00 0.00 40.80 4.17
3139 3995 1.590259 GCCGGTGAGCGAGAAGATC 60.590 63.158 5.27 0.00 35.45 2.75
3166 4022 3.367025 CGGTGAAGTCGTGAAATAGGTTC 59.633 47.826 0.00 0.00 36.70 3.62
3172 4028 1.269413 ACGTCGGTGAAGTCGTGAAAT 60.269 47.619 0.00 0.00 34.91 2.17
3175 4031 3.424300 ACGTCGGTGAAGTCGTGA 58.576 55.556 0.00 0.00 34.91 4.35
3275 4131 1.279271 GAGCAGGGTGTGGTACTTGAT 59.721 52.381 0.00 0.00 36.87 2.57
3317 4173 2.854777 CGTCCTTGCTGAAGTCGATAAG 59.145 50.000 0.00 0.00 30.92 1.73
3319 4175 2.089201 TCGTCCTTGCTGAAGTCGATA 58.911 47.619 0.00 0.00 32.53 2.92
3407 4263 4.675029 CCCGTTCGGCGACTTGGT 62.675 66.667 10.16 0.00 44.77 3.67
3520 4376 0.945813 GCTTGATGATGAGCAGCCTC 59.054 55.000 0.00 0.00 38.73 4.70
3550 4406 5.612736 TCCTCCAGGTTAAGGAACATCCTG 61.613 50.000 0.00 0.00 40.48 3.86
3562 4418 2.897969 GCCGATAATCTCCTCCAGGTTA 59.102 50.000 0.00 0.00 31.90 2.85
3655 4511 1.230635 CCACCGAGTTCACCAGCTTG 61.231 60.000 0.00 0.00 0.00 4.01
3657 4513 1.837051 TCCACCGAGTTCACCAGCT 60.837 57.895 0.00 0.00 0.00 4.24
3841 4697 2.747822 GCTGCTCTCGTCGACGGTA 61.748 63.158 35.05 22.58 40.29 4.02
4012 4868 5.784578 AAATTTACTGGTTGAGGTTGTCC 57.215 39.130 0.00 0.00 0.00 4.02
4080 4953 2.941064 CACGCCATGAGAGAATGAACAT 59.059 45.455 0.00 0.00 0.00 2.71
4236 5118 5.827267 TGACAAAACAACTGATGAGATTCCA 59.173 36.000 0.00 0.00 0.00 3.53
4280 5163 8.999431 CCAGAAAGTCAAAGTGCTTAACTATAA 58.001 33.333 0.00 0.00 38.56 0.98
4291 5174 5.828299 TTGGTTACCAGAAAGTCAAAGTG 57.172 39.130 3.65 0.00 33.81 3.16
4312 5196 5.885912 AGCAGATTGGTTTATCATACGGTTT 59.114 36.000 0.00 0.00 0.00 3.27
4368 5252 1.611977 TCGATGGATCCCGATACACAC 59.388 52.381 9.90 0.00 33.83 3.82
4369 5253 1.989706 TCGATGGATCCCGATACACA 58.010 50.000 9.90 0.00 33.83 3.72
4406 5290 3.456280 CCAACAAACCATGTGGAAACAG 58.544 45.455 5.96 0.00 42.99 3.16
4505 5394 4.039703 CACTCACATGCTCACAGTTTTTG 58.960 43.478 0.00 0.00 0.00 2.44
4536 5425 5.011023 GTCCCCACTGAACAAAATTTGATCT 59.989 40.000 13.19 0.00 34.02 2.75
4552 5441 0.981277 ATTCGGATTCGGTCCCCACT 60.981 55.000 0.00 0.00 44.77 4.00
4588 5477 1.665679 CCTCATTGGTCATTTCCGTCG 59.334 52.381 0.00 0.00 0.00 5.12
4607 5496 6.576185 TCTCGTATACTAAATCCAAACCACC 58.424 40.000 0.56 0.00 0.00 4.61
4608 5497 6.200475 GCTCTCGTATACTAAATCCAAACCAC 59.800 42.308 0.56 0.00 0.00 4.16
4609 5498 6.127281 TGCTCTCGTATACTAAATCCAAACCA 60.127 38.462 0.56 0.00 0.00 3.67
4610 5499 6.278363 TGCTCTCGTATACTAAATCCAAACC 58.722 40.000 0.56 0.00 0.00 3.27
4611 5500 7.491696 AGTTGCTCTCGTATACTAAATCCAAAC 59.508 37.037 0.56 0.00 0.00 2.93
4612 5501 7.553334 AGTTGCTCTCGTATACTAAATCCAAA 58.447 34.615 0.56 0.00 0.00 3.28
4613 5502 7.108841 AGTTGCTCTCGTATACTAAATCCAA 57.891 36.000 0.56 0.00 0.00 3.53
4614 5503 6.238953 GGAGTTGCTCTCGTATACTAAATCCA 60.239 42.308 0.56 0.00 43.60 3.41
4615 5504 6.151004 GGAGTTGCTCTCGTATACTAAATCC 58.849 44.000 0.56 0.00 43.60 3.01
4616 5505 6.736123 TGGAGTTGCTCTCGTATACTAAATC 58.264 40.000 0.56 0.00 43.60 2.17
4617 5506 6.710597 TGGAGTTGCTCTCGTATACTAAAT 57.289 37.500 0.56 0.00 43.60 1.40
4618 5507 6.327934 GTTGGAGTTGCTCTCGTATACTAAA 58.672 40.000 0.56 0.00 43.60 1.85
4619 5508 5.448225 CGTTGGAGTTGCTCTCGTATACTAA 60.448 44.000 0.56 0.00 43.60 2.24
4620 5509 4.034858 CGTTGGAGTTGCTCTCGTATACTA 59.965 45.833 0.56 0.00 43.60 1.82
4621 5510 3.181499 CGTTGGAGTTGCTCTCGTATACT 60.181 47.826 0.56 0.00 43.60 2.12
4622 5511 3.106672 CGTTGGAGTTGCTCTCGTATAC 58.893 50.000 0.00 0.00 43.60 1.47
4623 5512 2.479049 GCGTTGGAGTTGCTCTCGTATA 60.479 50.000 4.07 0.00 43.60 1.47
4624 5513 1.736032 GCGTTGGAGTTGCTCTCGTAT 60.736 52.381 4.07 0.00 43.60 3.06
4625 5514 0.388134 GCGTTGGAGTTGCTCTCGTA 60.388 55.000 4.07 0.00 43.60 3.43
4626 5515 1.664965 GCGTTGGAGTTGCTCTCGT 60.665 57.895 4.07 0.00 43.60 4.18
4627 5516 2.720758 CGCGTTGGAGTTGCTCTCG 61.721 63.158 0.00 0.00 43.60 4.04
4628 5517 3.016474 GCGCGTTGGAGTTGCTCTC 62.016 63.158 8.43 1.79 42.07 3.20
4670 5559 1.597690 CGTCTACACCGACACAAACGA 60.598 52.381 0.00 0.00 33.54 3.85
4677 5566 1.682854 ACTTTTCCGTCTACACCGACA 59.317 47.619 0.00 0.00 33.54 4.35
4683 5572 0.037975 GGCCGACTTTTCCGTCTACA 60.038 55.000 0.00 0.00 0.00 2.74
4685 5574 1.186917 TGGGCCGACTTTTCCGTCTA 61.187 55.000 0.00 0.00 0.00 2.59
4686 5575 2.047213 TTGGGCCGACTTTTCCGTCT 62.047 55.000 0.00 0.00 0.00 4.18
4690 5579 2.951458 CGTTGGGCCGACTTTTCC 59.049 61.111 21.44 0.00 0.00 3.13
4727 5616 2.651137 GCGGACGAAAAGCGAACGA 61.651 57.895 0.00 0.00 44.57 3.85
4731 5620 2.950172 GCAAGCGGACGAAAAGCGA 61.950 57.895 0.00 0.00 44.57 4.93
4746 5635 4.294523 CCGGAAATGAGTCGGCAA 57.705 55.556 0.00 0.00 37.25 4.52
4876 5767 3.071023 AGAGTTTGTTGTCGATCTTGGGA 59.929 43.478 0.00 0.00 0.00 4.37
4882 5773 1.390463 GGCGAGAGTTTGTTGTCGATC 59.610 52.381 0.00 0.00 36.08 3.69
4957 5848 1.296715 GGGAAGATGTGTCGGCACT 59.703 57.895 22.43 6.77 45.44 4.40
4969 5860 1.916273 TAGCAGCGTTGGGGGAAGA 60.916 57.895 0.16 0.00 0.00 2.87
4972 5863 3.712907 GGTAGCAGCGTTGGGGGA 61.713 66.667 0.16 0.00 0.00 4.81
4983 5875 3.755628 GCGACGTGGGAGGTAGCA 61.756 66.667 0.00 0.00 35.28 3.49
5018 5911 0.321298 GAAGCTTCGGTGCCCTAACA 60.321 55.000 11.40 0.00 0.00 2.41
5022 5915 4.035102 GGGAAGCTTCGGTGCCCT 62.035 66.667 19.91 0.00 35.86 5.19
5126 6062 2.887568 GGCATCTGACGAGCGTGG 60.888 66.667 0.00 0.00 0.00 4.94
5127 6063 1.875813 GAGGCATCTGACGAGCGTG 60.876 63.158 0.00 0.00 0.00 5.34
5128 6064 2.492090 GAGGCATCTGACGAGCGT 59.508 61.111 0.00 0.00 0.00 5.07
5129 6065 2.279120 GGAGGCATCTGACGAGCG 60.279 66.667 0.00 0.00 0.00 5.03
5130 6066 1.227205 CTGGAGGCATCTGACGAGC 60.227 63.158 0.00 0.00 0.00 5.03
5131 6067 1.440893 CCTGGAGGCATCTGACGAG 59.559 63.158 0.00 0.00 0.00 4.18
5132 6068 3.621225 CCTGGAGGCATCTGACGA 58.379 61.111 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.