Multiple sequence alignment - TraesCS1B01G263400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G263400 chr1B 100.000 7563 0 0 1 7563 463525116 463532678 0.000000e+00 13967.0
1 TraesCS1B01G263400 chr1B 86.926 283 24 7 3 282 105094714 105094986 9.530000e-79 305.0
2 TraesCS1B01G263400 chr1B 90.000 80 6 2 6105 6184 378835729 378835806 1.340000e-17 102.0
3 TraesCS1B01G263400 chr1B 86.813 91 11 1 6103 6193 159205721 159205810 4.830000e-17 100.0
4 TraesCS1B01G263400 chr1B 95.918 49 2 0 3737 3785 178511915 178511963 6.290000e-11 80.5
5 TraesCS1B01G263400 chr1A 95.250 4821 155 36 844 5622 446548221 446543433 0.000000e+00 7566.0
6 TraesCS1B01G263400 chr1A 91.693 1264 56 12 6315 7535 446542731 446541474 0.000000e+00 1707.0
7 TraesCS1B01G263400 chr1A 93.272 654 37 5 5623 6274 446543376 446542728 0.000000e+00 957.0
8 TraesCS1B01G263400 chr1A 93.502 277 18 0 401 677 446548802 446548526 5.460000e-111 412.0
9 TraesCS1B01G263400 chr1D 94.830 3849 119 33 1825 5622 346398808 346394989 0.000000e+00 5932.0
10 TraesCS1B01G263400 chr1D 91.633 1733 81 21 5842 7535 346394780 346393073 0.000000e+00 2338.0
11 TraesCS1B01G263400 chr1D 95.030 1006 36 9 847 1842 346400604 346399603 0.000000e+00 1568.0
12 TraesCS1B01G263400 chr1D 92.759 290 20 1 389 677 346401201 346400912 1.170000e-112 418.0
13 TraesCS1B01G263400 chr1D 91.930 285 13 5 1 283 346401506 346401230 2.560000e-104 390.0
14 TraesCS1B01G263400 chr1D 89.362 282 18 10 3 282 475305292 475305021 2.020000e-90 344.0
15 TraesCS1B01G263400 chr1D 94.091 220 11 1 5623 5840 346394944 346394725 4.370000e-87 333.0
16 TraesCS1B01G263400 chr1D 87.943 282 21 8 3 282 393121051 393121321 3.400000e-83 320.0
17 TraesCS1B01G263400 chr1D 94.545 110 2 2 288 396 418017977 418018083 4.690000e-37 167.0
18 TraesCS1B01G263400 chr1D 92.982 114 4 2 284 396 418018087 418017977 6.070000e-36 163.0
19 TraesCS1B01G263400 chr1D 92.771 83 5 1 6105 6187 279101376 279101457 1.330000e-22 119.0
20 TraesCS1B01G263400 chr1D 91.304 46 3 1 391 435 393121325 393121370 2.280000e-05 62.1
21 TraesCS1B01G263400 chr1D 89.796 49 4 1 391 438 475305017 475304969 2.280000e-05 62.1
22 TraesCS1B01G263400 chr2B 88.929 280 20 6 3 280 735909642 735909912 1.220000e-87 335.0
23 TraesCS1B01G263400 chr2B 86.833 281 28 5 3 282 12408458 12408186 9.530000e-79 305.0
24 TraesCS1B01G263400 chr2B 92.035 113 6 3 285 396 332407650 332407760 1.020000e-33 156.0
25 TraesCS1B01G263400 chr4B 88.652 282 21 7 3 282 506591475 506591203 4.370000e-87 333.0
26 TraesCS1B01G263400 chr4B 94.118 51 3 0 3735 3785 103809580 103809530 2.260000e-10 78.7
27 TraesCS1B01G263400 chr4B 95.652 46 2 0 3740 3785 19727482 19727437 2.930000e-09 75.0
28 TraesCS1B01G263400 chr5D 87.676 284 25 9 3 282 22209980 22210257 9.470000e-84 322.0
29 TraesCS1B01G263400 chr5D 89.157 83 8 1 6105 6187 442203727 442203808 1.340000e-17 102.0
30 TraesCS1B01G263400 chr5D 89.796 49 4 1 391 438 472757317 472757269 2.280000e-05 62.1
31 TraesCS1B01G263400 chr5D 97.143 35 1 0 3740 3774 213956142 213956108 8.200000e-05 60.2
32 TraesCS1B01G263400 chr7B 87.234 282 23 8 3 282 655564455 655564725 7.370000e-80 309.0
33 TraesCS1B01G263400 chr7B 87.097 93 7 2 6105 6197 450642196 450642109 4.830000e-17 100.0
34 TraesCS1B01G263400 chr5B 87.234 282 23 7 3 282 617731320 617731050 7.370000e-80 309.0
35 TraesCS1B01G263400 chr5B 93.750 112 2 5 287 396 298537799 298537907 6.070000e-36 163.0
36 TraesCS1B01G263400 chr5B 91.453 117 7 3 285 400 175243794 175243908 2.830000e-34 158.0
37 TraesCS1B01G263400 chr5B 91.892 111 8 1 286 396 175243906 175243797 3.650000e-33 154.0
38 TraesCS1B01G263400 chr5B 95.833 48 1 1 3730 3777 704308357 704308403 8.140000e-10 76.8
39 TraesCS1B01G263400 chr6D 92.857 112 6 2 287 397 81224786 81224676 2.180000e-35 161.0
40 TraesCS1B01G263400 chr6D 89.157 83 8 1 6105 6187 90111817 90111898 1.340000e-17 102.0
41 TraesCS1B01G263400 chr6D 95.652 46 2 0 3740 3785 24823420 24823375 2.930000e-09 75.0
42 TraesCS1B01G263400 chr6D 97.674 43 1 0 6826 6868 363180567 363180525 2.930000e-09 75.0
43 TraesCS1B01G263400 chr4A 93.636 110 1 2 288 397 737485664 737485767 7.850000e-35 159.0
44 TraesCS1B01G263400 chr4A 87.500 96 11 1 391 485 175693424 175693329 8.020000e-20 110.0
45 TraesCS1B01G263400 chr2D 90.756 119 9 2 279 396 55399289 55399172 2.830000e-34 158.0
46 TraesCS1B01G263400 chr2D 97.826 46 1 0 3740 3785 175825107 175825062 6.290000e-11 80.5
47 TraesCS1B01G263400 chr7A 82.727 110 13 6 6105 6210 275961094 275960987 8.080000e-15 93.5
48 TraesCS1B01G263400 chr7A 93.478 46 2 1 391 435 109535889 109535934 4.900000e-07 67.6
49 TraesCS1B01G263400 chr2A 97.778 45 1 0 3741 3785 67713357 67713313 2.260000e-10 78.7
50 TraesCS1B01G263400 chr2A 97.778 45 1 0 3741 3785 67978665 67978621 2.260000e-10 78.7
51 TraesCS1B01G263400 chr2A 97.059 34 0 1 4758 4790 43144087 43144120 1.000000e-03 56.5
52 TraesCS1B01G263400 chr6A 91.304 46 3 1 391 435 102695604 102695649 2.280000e-05 62.1
53 TraesCS1B01G263400 chr4D 91.304 46 3 1 391 435 466649676 466649721 2.280000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G263400 chr1B 463525116 463532678 7562 False 13967.000000 13967 100.000000 1 7563 1 chr1B.!!$F5 7562
1 TraesCS1B01G263400 chr1A 446541474 446548802 7328 True 2660.500000 7566 93.429250 401 7535 4 chr1A.!!$R1 7134
2 TraesCS1B01G263400 chr1D 346393073 346401506 8433 True 1829.833333 5932 93.378833 1 7535 6 chr1D.!!$R2 7534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
776 988 0.100682 TATCTCGCTCTTGTCACCGC 59.899 55.000 0.00 0.0 0.00 5.68 F
888 1101 0.108520 TGCTTTTACCTACTCGCCCG 60.109 55.000 0.00 0.0 0.00 6.13 F
1856 2891 0.251165 TTGGGGAACAAGGCTAGTGC 60.251 55.000 0.00 0.0 33.18 4.40 F
2420 3458 0.478072 TGTGATTCAACAGGCCCACT 59.522 50.000 0.00 0.0 0.00 4.00 F
3110 4159 0.670239 GTCGGGGCTGCAAAATTTGG 60.670 55.000 7.89 0.0 0.00 3.28 F
4630 5711 0.250901 GGGGATTGCCTGTATCGCAT 60.251 55.000 0.00 0.0 36.86 4.73 F
5073 6155 1.153549 GACAGCCGTGGAGATGGTC 60.154 63.158 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2254 3289 1.475682 CCTGCAGAAGGGCAAATCTTC 59.524 52.381 17.39 0.00 44.40 2.87 R
2542 3580 2.479566 TGGATGTCCTGCAGAAAGAC 57.520 50.000 17.39 14.70 36.82 3.01 R
3185 4234 0.391130 TTAGGTGCAGCGACATGTCC 60.391 55.000 20.03 12.53 0.00 4.02 R
3628 4688 1.002033 GAGCAAAACAGAGTGTGCCTG 60.002 52.381 0.00 0.00 37.73 4.85 R
4791 5873 2.143925 GCTTGTCCTGTTGTCCACTAC 58.856 52.381 0.00 0.00 0.00 2.73 R
5841 7039 0.321671 AGCCGTAGACTGTGTGCAAT 59.678 50.000 0.00 0.00 0.00 3.56 R
7008 8227 0.037232 GTTCAAGCGTCCCTACTGCT 60.037 55.000 0.00 0.00 37.16 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.457643 AGCCACCGCTCCTGCTATA 60.458 57.895 0.00 0.00 43.95 1.31
32 33 0.833834 AGCCACCGCTCCTGCTATAT 60.834 55.000 0.00 0.00 43.95 0.86
33 34 0.895530 GCCACCGCTCCTGCTATATA 59.104 55.000 0.00 0.00 36.97 0.86
34 35 1.482593 GCCACCGCTCCTGCTATATAT 59.517 52.381 0.00 0.00 36.97 0.86
58 59 4.326766 CCGCCGCCAGTGTTTGTG 62.327 66.667 0.00 0.00 0.00 3.33
75 76 1.451207 TGCGATGTTGCCGGCTTAT 60.451 52.632 29.70 18.59 0.00 1.73
76 77 1.029408 TGCGATGTTGCCGGCTTATT 61.029 50.000 29.70 10.30 0.00 1.40
77 78 0.941542 GCGATGTTGCCGGCTTATTA 59.058 50.000 29.70 9.95 0.00 0.98
78 79 1.069906 GCGATGTTGCCGGCTTATTAG 60.070 52.381 29.70 15.87 0.00 1.73
80 81 2.476619 CGATGTTGCCGGCTTATTAGAG 59.523 50.000 29.70 8.43 0.00 2.43
106 107 0.454600 CAATAGCTGCTGCCTGTTGG 59.545 55.000 13.43 0.00 40.80 3.77
216 218 0.306533 TGACGGCTTCAACGCTTTTC 59.693 50.000 0.00 0.00 34.00 2.29
233 235 2.686558 TTCTTTAGCGCAAGTGCTTG 57.313 45.000 13.81 7.51 44.46 4.01
283 285 5.649557 TGATTTTGCACTATCGAAATTGGG 58.350 37.500 0.00 0.00 31.91 4.12
285 287 5.713792 TTTTGCACTATCGAAATTGGGAA 57.286 34.783 0.00 0.00 0.00 3.97
286 288 5.713792 TTTGCACTATCGAAATTGGGAAA 57.286 34.783 0.00 0.00 0.00 3.13
287 289 5.913137 TTGCACTATCGAAATTGGGAAAT 57.087 34.783 0.00 0.00 0.00 2.17
288 290 7.397892 TTTGCACTATCGAAATTGGGAAATA 57.602 32.000 0.00 0.00 0.00 1.40
289 291 6.371809 TGCACTATCGAAATTGGGAAATAC 57.628 37.500 0.00 0.00 0.00 1.89
290 292 6.119536 TGCACTATCGAAATTGGGAAATACT 58.880 36.000 0.00 0.00 0.00 2.12
291 293 6.260050 TGCACTATCGAAATTGGGAAATACTC 59.740 38.462 0.00 0.00 0.00 2.59
301 303 2.616634 GGAAATACTCCCTCCGTTCC 57.383 55.000 0.00 0.00 38.44 3.62
302 304 1.835531 GGAAATACTCCCTCCGTTCCA 59.164 52.381 0.00 0.00 38.44 3.53
303 305 2.237893 GGAAATACTCCCTCCGTTCCAA 59.762 50.000 0.00 0.00 38.44 3.53
304 306 3.307904 GGAAATACTCCCTCCGTTCCAAA 60.308 47.826 0.00 0.00 38.44 3.28
305 307 4.329392 GAAATACTCCCTCCGTTCCAAAA 58.671 43.478 0.00 0.00 0.00 2.44
306 308 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
308 310 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
309 311 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
310 312 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
311 313 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
313 315 2.618709 CCTCCGTTCCAAAATAGATGGC 59.381 50.000 0.00 0.00 37.88 4.40
314 316 3.545703 CTCCGTTCCAAAATAGATGGCT 58.454 45.455 0.00 0.00 37.88 4.75
315 317 3.541632 TCCGTTCCAAAATAGATGGCTC 58.458 45.455 0.00 0.00 37.88 4.70
316 318 3.054728 TCCGTTCCAAAATAGATGGCTCA 60.055 43.478 0.00 0.00 37.88 4.26
318 320 4.438744 CCGTTCCAAAATAGATGGCTCAAC 60.439 45.833 0.00 0.00 37.88 3.18
319 321 4.396166 CGTTCCAAAATAGATGGCTCAACT 59.604 41.667 0.00 0.00 37.88 3.16
320 322 5.106157 CGTTCCAAAATAGATGGCTCAACTT 60.106 40.000 0.00 0.00 37.88 2.66
321 323 6.570378 CGTTCCAAAATAGATGGCTCAACTTT 60.570 38.462 0.00 0.00 37.88 2.66
322 324 6.271488 TCCAAAATAGATGGCTCAACTTTG 57.729 37.500 0.00 0.00 37.88 2.77
323 325 5.774690 TCCAAAATAGATGGCTCAACTTTGT 59.225 36.000 0.00 0.00 37.88 2.83
324 326 6.945435 TCCAAAATAGATGGCTCAACTTTGTA 59.055 34.615 0.00 0.00 37.88 2.41
325 327 7.029563 CCAAAATAGATGGCTCAACTTTGTAC 58.970 38.462 0.00 0.00 0.00 2.90
326 328 7.094205 CCAAAATAGATGGCTCAACTTTGTACT 60.094 37.037 0.00 0.00 0.00 2.73
327 329 8.946085 CAAAATAGATGGCTCAACTTTGTACTA 58.054 33.333 0.00 0.00 0.00 1.82
328 330 9.515226 AAAATAGATGGCTCAACTTTGTACTAA 57.485 29.630 0.00 0.00 0.00 2.24
329 331 8.494016 AATAGATGGCTCAACTTTGTACTAAC 57.506 34.615 0.00 0.00 0.00 2.34
330 332 6.115448 AGATGGCTCAACTTTGTACTAACT 57.885 37.500 0.00 0.00 0.00 2.24
331 333 6.534634 AGATGGCTCAACTTTGTACTAACTT 58.465 36.000 0.00 0.00 0.00 2.66
332 334 6.998673 AGATGGCTCAACTTTGTACTAACTTT 59.001 34.615 0.00 0.00 0.00 2.66
333 335 8.154856 AGATGGCTCAACTTTGTACTAACTTTA 58.845 33.333 0.00 0.00 0.00 1.85
334 336 8.685838 ATGGCTCAACTTTGTACTAACTTTAA 57.314 30.769 0.00 0.00 0.00 1.52
335 337 8.685838 TGGCTCAACTTTGTACTAACTTTAAT 57.314 30.769 0.00 0.00 0.00 1.40
336 338 9.781633 TGGCTCAACTTTGTACTAACTTTAATA 57.218 29.630 0.00 0.00 0.00 0.98
382 384 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
383 385 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
384 386 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
385 387 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
386 388 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
387 389 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
388 390 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
389 391 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
390 392 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
391 393 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
392 394 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
393 395 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
394 396 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
395 397 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
396 398 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
399 401 2.134789 TGGAACGGAGGGAGTAGTAC 57.865 55.000 0.00 0.00 0.00 2.73
429 431 7.473027 CAAGATTCATTGTTTGTTCTTGCTT 57.527 32.000 0.00 0.00 38.53 3.91
435 437 9.846248 ATTCATTGTTTGTTCTTGCTTACTATC 57.154 29.630 0.00 0.00 0.00 2.08
448 450 9.973450 TCTTGCTTACTATCTGATCATAACTTC 57.027 33.333 0.00 0.00 0.00 3.01
471 473 1.394917 CCAAGCAGAGAACATGTACGC 59.605 52.381 0.00 0.00 0.00 4.42
545 547 6.325028 TGGCTACAACTTCTAGCTCTGAATAT 59.675 38.462 0.00 0.00 37.39 1.28
570 572 5.437060 TCCTTCATAGGACATTGCTAAACC 58.563 41.667 0.00 0.00 45.82 3.27
586 588 0.693049 AACCGATCCTTCCAAGCTGT 59.307 50.000 0.00 0.00 0.00 4.40
594 596 1.474077 CCTTCCAAGCTGTGTAATGCC 59.526 52.381 0.00 0.00 0.00 4.40
595 597 1.131126 CTTCCAAGCTGTGTAATGCCG 59.869 52.381 0.00 0.00 0.00 5.69
608 610 0.607489 AATGCCGAGCTGAGCTGTTT 60.607 50.000 13.71 0.00 39.88 2.83
618 620 5.050363 CGAGCTGAGCTGTTTGTAAACTTAA 60.050 40.000 13.71 0.00 39.88 1.85
669 671 7.657354 CCTCCTTTCTTAAAAAGGGAACAATTG 59.343 37.037 19.97 3.24 45.26 2.32
680 682 9.981114 AAAAAGGGAACAATTGAACTATTGTAG 57.019 29.630 13.59 0.00 45.44 2.74
681 683 7.703058 AAGGGAACAATTGAACTATTGTAGG 57.297 36.000 13.59 0.00 45.44 3.18
683 685 6.011981 AGGGAACAATTGAACTATTGTAGGGA 60.012 38.462 13.59 0.00 45.44 4.20
685 687 7.110155 GGAACAATTGAACTATTGTAGGGAGA 58.890 38.462 13.59 0.00 45.44 3.71
686 688 7.610305 GGAACAATTGAACTATTGTAGGGAGAA 59.390 37.037 13.59 0.00 45.44 2.87
688 690 8.567285 ACAATTGAACTATTGTAGGGAGAAAG 57.433 34.615 13.59 0.00 44.62 2.62
689 691 7.121315 ACAATTGAACTATTGTAGGGAGAAAGC 59.879 37.037 13.59 0.00 44.62 3.51
691 693 5.488341 TGAACTATTGTAGGGAGAAAGCAC 58.512 41.667 0.00 0.00 0.00 4.40
692 694 4.124851 ACTATTGTAGGGAGAAAGCACG 57.875 45.455 0.00 0.00 0.00 5.34
693 695 3.514309 ACTATTGTAGGGAGAAAGCACGT 59.486 43.478 0.00 0.00 0.00 4.49
694 696 2.163818 TTGTAGGGAGAAAGCACGTG 57.836 50.000 12.28 12.28 0.00 4.49
695 697 0.320421 TGTAGGGAGAAAGCACGTGC 60.320 55.000 32.79 32.79 42.49 5.34
721 933 4.946478 TGGGTTGGGTTGTTATTTTCAG 57.054 40.909 0.00 0.00 0.00 3.02
748 960 6.291377 ACTCGTAGCACATTCCATAATCATT 58.709 36.000 0.00 0.00 0.00 2.57
773 985 5.232414 GGTAAACATATCTCGCTCTTGTCAC 59.768 44.000 0.00 0.00 0.00 3.67
774 986 3.444703 ACATATCTCGCTCTTGTCACC 57.555 47.619 0.00 0.00 0.00 4.02
775 987 2.223595 ACATATCTCGCTCTTGTCACCG 60.224 50.000 0.00 0.00 0.00 4.94
776 988 0.100682 TATCTCGCTCTTGTCACCGC 59.899 55.000 0.00 0.00 0.00 5.68
777 989 2.564553 ATCTCGCTCTTGTCACCGCC 62.565 60.000 0.00 0.00 0.00 6.13
778 990 3.573772 CTCGCTCTTGTCACCGCCA 62.574 63.158 0.00 0.00 0.00 5.69
779 991 3.114616 CGCTCTTGTCACCGCCAG 61.115 66.667 0.00 0.00 0.00 4.85
780 992 2.031163 GCTCTTGTCACCGCCAGT 59.969 61.111 0.00 0.00 0.00 4.00
788 1000 3.508474 CACCGCCAGTGTTTGTGT 58.492 55.556 0.00 0.00 41.93 3.72
789 1001 1.063972 CACCGCCAGTGTTTGTGTG 59.936 57.895 0.00 0.00 41.93 3.82
790 1002 2.026014 CCGCCAGTGTTTGTGTGC 59.974 61.111 0.00 0.00 0.00 4.57
791 1003 2.480610 CCGCCAGTGTTTGTGTGCT 61.481 57.895 0.00 0.00 0.00 4.40
792 1004 1.163420 CCGCCAGTGTTTGTGTGCTA 61.163 55.000 0.00 0.00 0.00 3.49
793 1005 0.660488 CGCCAGTGTTTGTGTGCTAA 59.340 50.000 0.00 0.00 0.00 3.09
794 1006 1.334059 CGCCAGTGTTTGTGTGCTAAG 60.334 52.381 0.00 0.00 0.00 2.18
795 1007 1.600413 GCCAGTGTTTGTGTGCTAAGC 60.600 52.381 0.00 0.00 0.00 3.09
796 1008 1.001378 CCAGTGTTTGTGTGCTAAGCC 60.001 52.381 0.00 0.00 0.00 4.35
797 1009 0.944386 AGTGTTTGTGTGCTAAGCCG 59.056 50.000 0.00 0.00 0.00 5.52
798 1010 0.660300 GTGTTTGTGTGCTAAGCCGC 60.660 55.000 0.00 0.00 0.00 6.53
799 1011 1.081442 GTTTGTGTGCTAAGCCGCC 60.081 57.895 0.00 0.00 0.00 6.13
800 1012 2.612567 TTTGTGTGCTAAGCCGCCG 61.613 57.895 0.00 0.00 0.00 6.46
807 1019 4.760047 CTAAGCCGCCGCCAGTGT 62.760 66.667 0.00 0.00 34.57 3.55
808 1020 3.365291 CTAAGCCGCCGCCAGTGTA 62.365 63.158 0.00 0.00 34.57 2.90
809 1021 2.644555 CTAAGCCGCCGCCAGTGTAT 62.645 60.000 0.00 0.00 34.57 2.29
810 1022 2.916502 TAAGCCGCCGCCAGTGTATG 62.917 60.000 0.00 0.00 34.57 2.39
812 1024 4.838152 CCGCCGCCAGTGTATGCT 62.838 66.667 0.00 0.00 0.00 3.79
813 1025 2.819595 CGCCGCCAGTGTATGCTT 60.820 61.111 0.00 0.00 0.00 3.91
814 1026 2.398554 CGCCGCCAGTGTATGCTTT 61.399 57.895 0.00 0.00 0.00 3.51
815 1027 1.883021 GCCGCCAGTGTATGCTTTT 59.117 52.632 0.00 0.00 0.00 2.27
816 1028 1.091537 GCCGCCAGTGTATGCTTTTA 58.908 50.000 0.00 0.00 0.00 1.52
817 1029 1.202143 GCCGCCAGTGTATGCTTTTAC 60.202 52.381 0.00 0.00 0.00 2.01
818 1030 1.400494 CCGCCAGTGTATGCTTTTACC 59.600 52.381 0.00 0.00 0.00 2.85
819 1031 2.080693 CGCCAGTGTATGCTTTTACCA 58.919 47.619 0.00 0.00 0.00 3.25
820 1032 2.095853 CGCCAGTGTATGCTTTTACCAG 59.904 50.000 0.00 0.00 0.00 4.00
821 1033 3.081804 GCCAGTGTATGCTTTTACCAGT 58.918 45.455 0.00 0.00 0.00 4.00
822 1034 3.119849 GCCAGTGTATGCTTTTACCAGTG 60.120 47.826 0.00 0.00 0.00 3.66
823 1035 4.072131 CCAGTGTATGCTTTTACCAGTGT 58.928 43.478 0.00 0.00 0.00 3.55
824 1036 5.242434 CCAGTGTATGCTTTTACCAGTGTA 58.758 41.667 0.00 0.00 0.00 2.90
825 1037 5.880332 CCAGTGTATGCTTTTACCAGTGTAT 59.120 40.000 0.00 0.00 0.00 2.29
826 1038 7.045416 CCAGTGTATGCTTTTACCAGTGTATA 58.955 38.462 0.00 0.00 0.00 1.47
827 1039 7.011109 CCAGTGTATGCTTTTACCAGTGTATAC 59.989 40.741 0.00 0.00 0.00 1.47
828 1040 6.755141 AGTGTATGCTTTTACCAGTGTATACG 59.245 38.462 0.00 0.00 0.00 3.06
829 1041 6.753279 GTGTATGCTTTTACCAGTGTATACGA 59.247 38.462 0.00 0.00 0.00 3.43
830 1042 7.276218 GTGTATGCTTTTACCAGTGTATACGAA 59.724 37.037 0.00 0.00 0.00 3.85
831 1043 7.982919 TGTATGCTTTTACCAGTGTATACGAAT 59.017 33.333 0.00 0.00 0.00 3.34
832 1044 6.897259 TGCTTTTACCAGTGTATACGAATC 57.103 37.500 0.00 0.00 0.00 2.52
833 1045 6.636705 TGCTTTTACCAGTGTATACGAATCT 58.363 36.000 0.00 0.00 0.00 2.40
834 1046 7.101054 TGCTTTTACCAGTGTATACGAATCTT 58.899 34.615 0.00 0.00 0.00 2.40
835 1047 7.064134 TGCTTTTACCAGTGTATACGAATCTTG 59.936 37.037 0.00 0.00 0.00 3.02
836 1048 6.897259 TTTACCAGTGTATACGAATCTTGC 57.103 37.500 0.00 0.00 0.00 4.01
837 1049 4.465632 ACCAGTGTATACGAATCTTGCA 57.534 40.909 0.00 0.00 0.00 4.08
838 1050 5.023533 ACCAGTGTATACGAATCTTGCAT 57.976 39.130 0.00 0.00 0.00 3.96
839 1051 5.050490 ACCAGTGTATACGAATCTTGCATC 58.950 41.667 0.00 0.00 0.00 3.91
840 1052 4.449068 CCAGTGTATACGAATCTTGCATCC 59.551 45.833 0.00 0.00 0.00 3.51
841 1053 5.049828 CAGTGTATACGAATCTTGCATCCA 58.950 41.667 0.00 0.00 0.00 3.41
842 1054 5.698089 CAGTGTATACGAATCTTGCATCCAT 59.302 40.000 0.00 0.00 0.00 3.41
843 1055 6.868339 CAGTGTATACGAATCTTGCATCCATA 59.132 38.462 0.00 0.00 0.00 2.74
883 1096 9.250624 CTTATCAGTGTATGCTTTTACCTACTC 57.749 37.037 0.00 0.00 0.00 2.59
886 1099 3.554731 GTGTATGCTTTTACCTACTCGCC 59.445 47.826 0.00 0.00 0.00 5.54
888 1101 0.108520 TGCTTTTACCTACTCGCCCG 60.109 55.000 0.00 0.00 0.00 6.13
897 1110 2.004808 CTACTCGCCCGCTCACATCA 62.005 60.000 0.00 0.00 0.00 3.07
963 1184 5.936372 TGGAGCTACATATCAATGAGCATTC 59.064 40.000 0.00 3.53 38.06 2.67
1026 1248 4.263068 GGTTATGGCATGAGTAGGCTACAT 60.263 45.833 25.48 9.44 33.30 2.29
1027 1249 2.916702 TGGCATGAGTAGGCTACATG 57.083 50.000 25.48 20.56 42.60 3.21
1028 1250 2.397597 TGGCATGAGTAGGCTACATGA 58.602 47.619 25.48 9.74 42.41 3.07
1034 1256 4.741928 TGAGTAGGCTACATGAGGGATA 57.258 45.455 25.48 0.00 0.00 2.59
1101 1323 9.483062 GTCGAAGTGAATAATGATTTCTCAAAG 57.517 33.333 0.00 0.00 34.37 2.77
1185 1407 4.214310 AGTCCATGGATAGAGTCTCAGTG 58.786 47.826 19.62 0.00 0.00 3.66
1398 1620 9.029243 GTATGCTATGCTCTAATGCAATAGTAG 57.971 37.037 8.63 4.63 46.61 2.57
1675 1898 8.491958 GTTCATCTTAATTTCCCCCTAACTCTA 58.508 37.037 0.00 0.00 0.00 2.43
1700 1923 2.867647 GCATGGGCTCAGTTTTGGAAAC 60.868 50.000 0.00 0.00 36.96 2.78
1713 1936 6.477688 CAGTTTTGGAAACGTGTAGTTCTCTA 59.522 38.462 0.00 0.00 43.37 2.43
1819 2042 3.601443 ACCGAAGAGGATGAACTGAAG 57.399 47.619 0.00 0.00 45.00 3.02
1856 2891 0.251165 TTGGGGAACAAGGCTAGTGC 60.251 55.000 0.00 0.00 33.18 4.40
1872 2907 0.666374 GTGCGGGTGTGCTTTTAGTT 59.334 50.000 0.00 0.00 35.36 2.24
1949 2984 8.429493 TGTTTCATCTGAGCTATTGTCAATAG 57.571 34.615 23.11 23.11 42.99 1.73
1950 2985 7.496920 TGTTTCATCTGAGCTATTGTCAATAGG 59.503 37.037 26.62 14.43 40.94 2.57
1967 3002 8.988060 TGTCAATAGGTTGATAAGATAACTCCA 58.012 33.333 0.00 0.00 45.46 3.86
2031 3066 9.956640 TGCTAAATTGGAACATATTGGAAAAAT 57.043 25.926 0.00 0.00 39.30 1.82
2082 3117 7.853299 TGGTATTATTGTGTAGCCTAACTTCA 58.147 34.615 0.00 0.00 0.00 3.02
2109 3144 5.045066 GGTTACCTGTTCCCTTTATCTTCCT 60.045 44.000 0.00 0.00 0.00 3.36
2113 3148 6.010850 ACCTGTTCCCTTTATCTTCCTTTTC 58.989 40.000 0.00 0.00 0.00 2.29
2208 3243 7.015487 CCCATTATCCATATTGTCAATGTTGGT 59.985 37.037 20.40 13.97 31.27 3.67
2219 3254 4.275689 TGTCAATGTTGGTACTGCTTCAAG 59.724 41.667 0.00 0.00 0.00 3.02
2254 3289 5.063186 GCTAATGTCACTGTGAGTTCTCATG 59.937 44.000 11.41 1.79 0.00 3.07
2315 3351 2.290260 TGTTGAGATAGTGCCACCCTTG 60.290 50.000 0.00 0.00 0.00 3.61
2415 3453 5.831997 AGTTTACTTTGTGATTCAACAGGC 58.168 37.500 0.00 0.00 35.61 4.85
2420 3458 0.478072 TGTGATTCAACAGGCCCACT 59.522 50.000 0.00 0.00 0.00 4.00
2542 3580 6.707711 TGTTAAACTATTAATGCCGCTTACG 58.292 36.000 0.00 0.00 33.76 3.18
2697 3735 4.899352 ATATGTCTATGACCTTCAGGCC 57.101 45.455 0.00 0.00 39.32 5.19
2738 3776 2.224597 TGCCTGCCCATACAGTATGATG 60.225 50.000 20.55 12.47 39.69 3.07
2743 3781 6.576244 GCCTGCCCATACAGTATGATGTTATA 60.576 42.308 20.55 1.19 39.69 0.98
2768 3806 8.712228 ATTTTCTCTTGGGTTGTATCTTCTTT 57.288 30.769 0.00 0.00 0.00 2.52
2769 3807 7.745620 TTTCTCTTGGGTTGTATCTTCTTTC 57.254 36.000 0.00 0.00 0.00 2.62
2772 3810 7.106239 TCTCTTGGGTTGTATCTTCTTTCATC 58.894 38.462 0.00 0.00 0.00 2.92
2777 3815 7.004086 TGGGTTGTATCTTCTTTCATCTTTGT 58.996 34.615 0.00 0.00 0.00 2.83
2883 3921 6.375455 CAGCCAAGTAACTTCATCCATACTTT 59.625 38.462 0.00 0.00 36.68 2.66
3070 4119 7.087007 GGAAACTCTCATTTGGTTGATTTCTC 58.913 38.462 0.00 0.00 0.00 2.87
3110 4159 0.670239 GTCGGGGCTGCAAAATTTGG 60.670 55.000 7.89 0.00 0.00 3.28
3119 4168 1.071857 TGCAAAATTTGGCAGCCATCA 59.928 42.857 17.09 5.50 34.58 3.07
3128 4177 2.541120 GCAGCCATCAGCCGACATC 61.541 63.158 0.00 0.00 45.47 3.06
3185 4234 2.223923 TGGTTTGGCCAATTTTCGACAG 60.224 45.455 21.26 0.00 45.94 3.51
3225 4274 6.929606 CCTAACCAAGCATACTATGTACCTTC 59.070 42.308 0.00 0.00 0.00 3.46
3226 4275 5.950544 ACCAAGCATACTATGTACCTTCA 57.049 39.130 0.00 0.00 0.00 3.02
3339 4388 4.935352 TGCTCTTTTAAATGCAACACCT 57.065 36.364 0.00 0.00 32.12 4.00
3379 4434 9.733556 TTTTGTTCTAGAAACTATGCTTGGATA 57.266 29.630 6.78 0.00 0.00 2.59
3413 4468 7.168219 ACTTGGCTAAGTCAACTGATTGATTA 58.832 34.615 10.03 0.00 46.43 1.75
3414 4469 7.831193 ACTTGGCTAAGTCAACTGATTGATTAT 59.169 33.333 10.03 0.00 46.43 1.28
3415 4470 8.579850 TTGGCTAAGTCAACTGATTGATTATT 57.420 30.769 0.00 0.00 46.43 1.40
3416 4471 8.213518 TGGCTAAGTCAACTGATTGATTATTC 57.786 34.615 0.00 0.00 46.43 1.75
3468 4523 1.620819 GGAAGTTCTCTGCTCCAGTCA 59.379 52.381 2.25 0.00 32.61 3.41
3616 4676 3.873952 GCCTTAACATCTTGCTCTACTGG 59.126 47.826 0.00 0.00 0.00 4.00
3628 4688 1.880027 CTCTACTGGTTTGTTGGGCAC 59.120 52.381 0.00 0.00 0.00 5.01
3631 4691 1.042559 ACTGGTTTGTTGGGCACAGG 61.043 55.000 0.00 0.00 36.48 4.00
3634 4694 1.227234 GTTTGTTGGGCACAGGCAC 60.227 57.895 0.00 0.00 46.33 5.01
3786 4846 5.173131 CGTTTTGGCAGTTTAGATTGAACAC 59.827 40.000 0.00 0.00 0.00 3.32
3787 4847 5.843673 TTTGGCAGTTTAGATTGAACACA 57.156 34.783 0.00 0.00 0.00 3.72
3808 4868 9.836864 AACACAGTTTGAGATGCATATAGATTA 57.163 29.630 0.00 0.00 0.00 1.75
4025 5086 4.884668 ACTTGTGCAAGGTAGCTTACTA 57.115 40.909 15.31 0.00 42.53 1.82
4030 5091 8.047310 ACTTGTGCAAGGTAGCTTACTATTATT 58.953 33.333 15.31 0.00 42.53 1.40
4165 5227 4.099266 AGTGTGAAGGCTTTTTATGTTGCA 59.901 37.500 0.00 0.00 0.00 4.08
4190 5252 4.458397 CCTCCATATTGCTGAATGACTGT 58.542 43.478 0.00 0.00 0.00 3.55
4193 5255 5.988287 TCCATATTGCTGAATGACTGTACA 58.012 37.500 0.00 0.00 0.00 2.90
4286 5348 4.913335 AAGATTACATGCCATGAAGCTG 57.087 40.909 12.53 0.00 0.00 4.24
4297 5359 1.002792 CATGAAGCTGATGATGTGCCG 60.003 52.381 0.45 0.00 0.00 5.69
4357 5420 1.750778 ACCTGGAAATATGCTTTGGCG 59.249 47.619 0.00 0.00 42.25 5.69
4384 5447 8.970020 AGTGCATAAATAAAATGAGATGGTTCA 58.030 29.630 0.00 0.00 0.00 3.18
4454 5535 6.494146 ACTCTACTCCAGTATTATTGCCTACC 59.506 42.308 0.00 0.00 0.00 3.18
4455 5536 6.621394 TCTACTCCAGTATTATTGCCTACCT 58.379 40.000 0.00 0.00 0.00 3.08
4459 5540 4.525487 TCCAGTATTATTGCCTACCTACCG 59.475 45.833 0.00 0.00 0.00 4.02
4565 5646 8.807667 GCAATAGCATTAGTTAAGCATTCATT 57.192 30.769 0.00 0.00 41.58 2.57
4566 5647 9.252962 GCAATAGCATTAGTTAAGCATTCATTT 57.747 29.630 0.00 0.00 41.58 2.32
4621 5702 7.591821 TGTTTATATTTCTTAGGGGATTGCCT 58.408 34.615 0.00 0.00 0.00 4.75
4630 5711 0.250901 GGGGATTGCCTGTATCGCAT 60.251 55.000 0.00 0.00 36.86 4.73
4654 5735 7.284919 TCGATACAATCCTGTTATTGAGCTA 57.715 36.000 3.73 0.00 38.84 3.32
4718 5800 1.275291 CCTTGAGTACCGGAGAAGCAA 59.725 52.381 9.46 4.90 0.00 3.91
4860 5942 6.840479 TCCTATGTGGTTTTGCATTAGGTGC 61.840 44.000 0.00 0.00 44.84 5.01
4912 5994 7.368059 GTTTCCTCTGGAACACGAATAAAAAT 58.632 34.615 0.00 0.00 41.87 1.82
5073 6155 1.153549 GACAGCCGTGGAGATGGTC 60.154 63.158 0.00 0.00 0.00 4.02
5180 6262 5.336107 TTAAGCAACAGGCAGTCTGCTTAG 61.336 45.833 23.68 15.56 45.81 2.18
5215 6297 4.149511 TGCTCGGATTTGGACATATTGA 57.850 40.909 0.00 0.00 0.00 2.57
5235 6317 5.506686 TGACTTACTGCAGAGCTATACTG 57.493 43.478 23.35 0.00 38.27 2.74
5239 6321 5.242838 ACTTACTGCAGAGCTATACTGATCC 59.757 44.000 23.35 0.00 37.54 3.36
5381 6463 3.063997 GCCATTCAGTTCTCCGTACATTG 59.936 47.826 0.00 0.00 0.00 2.82
5430 6513 2.423892 AGGTACATACTGTGACTGCTCG 59.576 50.000 0.00 0.00 0.00 5.03
5484 6569 4.641396 TGTAGTGGATATGTGCTAATGGC 58.359 43.478 0.00 0.00 42.22 4.40
5495 6580 3.181445 TGTGCTAATGGCCTAATACCCTG 60.181 47.826 3.32 0.00 40.92 4.45
5572 6657 4.747108 GTGTCTGCATCTATGATGTGGTAC 59.253 45.833 8.98 0.00 0.00 3.34
5585 6670 5.647589 TGATGTGGTACGTCTCTATTCAAC 58.352 41.667 0.00 0.00 35.24 3.18
5586 6671 5.184287 TGATGTGGTACGTCTCTATTCAACA 59.816 40.000 0.00 0.00 35.24 3.33
5587 6672 5.654603 TGTGGTACGTCTCTATTCAACAT 57.345 39.130 0.00 0.00 0.00 2.71
5588 6673 5.407502 TGTGGTACGTCTCTATTCAACATG 58.592 41.667 0.00 0.00 0.00 3.21
5593 6678 3.873361 ACGTCTCTATTCAACATGCATGG 59.127 43.478 29.41 13.66 0.00 3.66
5704 6847 7.827701 ACATAATGACGAGAAACTACTCTTGA 58.172 34.615 0.00 0.00 35.06 3.02
5718 6861 8.499403 AACTACTCTTGATGAGAAATTTAGGC 57.501 34.615 2.06 0.00 45.39 3.93
5720 6863 8.982723 ACTACTCTTGATGAGAAATTTAGGCTA 58.017 33.333 2.06 0.00 45.39 3.93
5798 6941 5.316167 AGAAGGTTGATTGCACACATTCTA 58.684 37.500 10.90 0.00 35.97 2.10
5800 6943 3.436704 AGGTTGATTGCACACATTCTACG 59.563 43.478 0.00 0.00 34.69 3.51
5836 7034 6.981559 GTGATGGAGAAGATACTTGAAGTACC 59.018 42.308 7.28 0.00 32.84 3.34
5837 7035 6.667848 TGATGGAGAAGATACTTGAAGTACCA 59.332 38.462 7.28 9.58 32.84 3.25
5838 7036 7.345653 TGATGGAGAAGATACTTGAAGTACCAT 59.654 37.037 17.60 17.60 34.65 3.55
5839 7037 7.496346 TGGAGAAGATACTTGAAGTACCATT 57.504 36.000 7.28 2.98 32.84 3.16
5840 7038 7.556844 TGGAGAAGATACTTGAAGTACCATTC 58.443 38.462 7.28 11.43 32.84 2.67
5841 7039 7.180229 TGGAGAAGATACTTGAAGTACCATTCA 59.820 37.037 19.46 7.94 37.41 2.57
5842 7040 8.207545 GGAGAAGATACTTGAAGTACCATTCAT 58.792 37.037 19.46 5.43 38.90 2.57
5843 7041 9.606631 GAGAAGATACTTGAAGTACCATTCATT 57.393 33.333 19.46 7.56 38.90 2.57
5844 7042 9.388506 AGAAGATACTTGAAGTACCATTCATTG 57.611 33.333 19.46 0.00 38.90 2.82
5845 7043 7.559590 AGATACTTGAAGTACCATTCATTGC 57.440 36.000 7.28 0.00 38.90 3.56
5846 7044 7.112122 AGATACTTGAAGTACCATTCATTGCA 58.888 34.615 7.28 0.00 38.90 4.08
5847 7045 5.376854 ACTTGAAGTACCATTCATTGCAC 57.623 39.130 0.00 0.00 38.90 4.57
5848 7046 4.826733 ACTTGAAGTACCATTCATTGCACA 59.173 37.500 0.00 0.00 38.90 4.57
5849 7047 4.764679 TGAAGTACCATTCATTGCACAC 57.235 40.909 0.00 0.00 34.31 3.82
5850 7048 4.140536 TGAAGTACCATTCATTGCACACA 58.859 39.130 0.00 0.00 34.31 3.72
5851 7049 4.216042 TGAAGTACCATTCATTGCACACAG 59.784 41.667 0.00 0.00 34.31 3.66
5852 7050 3.754965 AGTACCATTCATTGCACACAGT 58.245 40.909 0.00 0.00 0.00 3.55
5853 7051 3.753272 AGTACCATTCATTGCACACAGTC 59.247 43.478 0.00 0.00 0.00 3.51
5854 7052 2.867624 ACCATTCATTGCACACAGTCT 58.132 42.857 0.00 0.00 0.00 3.24
5855 7053 4.019792 ACCATTCATTGCACACAGTCTA 57.980 40.909 0.00 0.00 0.00 2.59
5856 7054 3.753272 ACCATTCATTGCACACAGTCTAC 59.247 43.478 0.00 0.00 0.00 2.59
5857 7055 3.181517 CCATTCATTGCACACAGTCTACG 60.182 47.826 0.00 0.00 0.00 3.51
5858 7056 2.078849 TCATTGCACACAGTCTACGG 57.921 50.000 0.00 0.00 0.00 4.02
5859 7057 0.443869 CATTGCACACAGTCTACGGC 59.556 55.000 0.00 0.00 0.00 5.68
5860 7058 0.321671 ATTGCACACAGTCTACGGCT 59.678 50.000 0.00 0.00 0.00 5.52
5861 7059 0.599991 TTGCACACAGTCTACGGCTG 60.600 55.000 0.00 0.00 39.67 4.85
5862 7060 1.006102 GCACACAGTCTACGGCTGT 60.006 57.895 2.42 2.42 46.86 4.40
5863 7061 0.242825 GCACACAGTCTACGGCTGTA 59.757 55.000 5.05 5.05 44.43 2.74
5864 7062 1.336517 GCACACAGTCTACGGCTGTAA 60.337 52.381 6.88 0.00 44.43 2.41
5865 7063 2.864882 GCACACAGTCTACGGCTGTAAA 60.865 50.000 6.88 0.00 44.43 2.01
5866 7064 3.386486 CACACAGTCTACGGCTGTAAAA 58.614 45.455 6.88 0.00 44.43 1.52
5867 7065 3.805422 CACACAGTCTACGGCTGTAAAAA 59.195 43.478 6.88 0.00 44.43 1.94
5868 7066 4.056050 ACACAGTCTACGGCTGTAAAAAG 58.944 43.478 6.88 0.00 44.43 2.27
5869 7067 4.056050 CACAGTCTACGGCTGTAAAAAGT 58.944 43.478 6.88 1.14 44.43 2.66
5870 7068 4.056050 ACAGTCTACGGCTGTAAAAAGTG 58.944 43.478 6.88 10.40 44.41 3.16
5871 7069 4.202182 ACAGTCTACGGCTGTAAAAAGTGA 60.202 41.667 17.66 5.45 44.41 3.41
5872 7070 4.929808 CAGTCTACGGCTGTAAAAAGTGAT 59.070 41.667 6.88 0.00 0.00 3.06
5873 7071 4.929808 AGTCTACGGCTGTAAAAAGTGATG 59.070 41.667 6.88 0.00 0.00 3.07
5874 7072 4.092968 GTCTACGGCTGTAAAAAGTGATGG 59.907 45.833 6.88 0.00 0.00 3.51
5875 7073 3.134574 ACGGCTGTAAAAAGTGATGGA 57.865 42.857 0.00 0.00 0.00 3.41
5876 7074 3.686016 ACGGCTGTAAAAAGTGATGGAT 58.314 40.909 0.00 0.00 0.00 3.41
5877 7075 4.839121 ACGGCTGTAAAAAGTGATGGATA 58.161 39.130 0.00 0.00 0.00 2.59
5878 7076 5.250200 ACGGCTGTAAAAAGTGATGGATAA 58.750 37.500 0.00 0.00 0.00 1.75
5879 7077 5.123344 ACGGCTGTAAAAAGTGATGGATAAC 59.877 40.000 0.00 0.00 0.00 1.89
5880 7078 5.123186 CGGCTGTAAAAAGTGATGGATAACA 59.877 40.000 0.00 0.00 0.00 2.41
5881 7079 6.183360 CGGCTGTAAAAAGTGATGGATAACAT 60.183 38.462 0.00 0.00 44.18 2.71
5882 7080 7.011950 CGGCTGTAAAAAGTGATGGATAACATA 59.988 37.037 0.00 0.00 40.72 2.29
5883 7081 8.129211 GGCTGTAAAAAGTGATGGATAACATAC 58.871 37.037 0.00 0.00 40.72 2.39
5884 7082 8.893727 GCTGTAAAAAGTGATGGATAACATACT 58.106 33.333 0.00 0.00 40.72 2.12
5890 7088 9.520515 AAAAGTGATGGATAACATACTTGAAGT 57.479 29.630 2.37 2.37 40.72 3.01
5892 7090 9.601217 AAGTGATGGATAACATACTTGAAGTAC 57.399 33.333 7.28 0.00 40.72 2.73
5937 7135 7.067008 CCTTTTACTTGTTCTCTTTCCTGTTCA 59.933 37.037 0.00 0.00 0.00 3.18
5942 7140 6.208599 ACTTGTTCTCTTTCCTGTTCAAACAA 59.791 34.615 0.00 0.00 38.66 2.83
5944 7142 6.987386 TGTTCTCTTTCCTGTTCAAACAAAA 58.013 32.000 0.00 0.00 38.66 2.44
5948 7146 7.835822 TCTCTTTCCTGTTCAAACAAAATTCA 58.164 30.769 0.00 0.00 38.66 2.57
6079 7277 4.702131 GGTGTAGACATGCCTCTTGAATTT 59.298 41.667 0.00 0.00 0.00 1.82
6131 7329 6.684686 TCCCTCCGTATCAAAATATAAGACG 58.315 40.000 0.00 0.00 0.00 4.18
6187 7385 6.986817 CGTCTTACATTTTGATACAGAGGGAT 59.013 38.462 0.00 0.00 0.00 3.85
6236 7434 5.130975 ACATATATCTTTCAGTGAGGTGCCA 59.869 40.000 0.00 0.00 0.00 4.92
6238 7436 2.189594 TCTTTCAGTGAGGTGCCATG 57.810 50.000 0.00 0.00 0.00 3.66
6306 7504 4.202151 ACAATCCACTTTTGCTCCTTTCAC 60.202 41.667 0.00 0.00 0.00 3.18
6511 7709 2.308722 ATCATGGGACGGCCAGGTT 61.309 57.895 11.00 0.00 35.15 3.50
6554 7752 4.378874 GCTCCAAGCAAGATACTTGTGAAC 60.379 45.833 12.07 0.00 42.41 3.18
6555 7753 4.973168 TCCAAGCAAGATACTTGTGAACT 58.027 39.130 12.07 0.00 42.41 3.01
6588 7786 1.345176 GTGCAGATACTTCGCGTGC 59.655 57.895 5.77 7.40 34.62 5.34
6609 7807 4.021104 TGCCCTGTAATCTTCCGATATCAG 60.021 45.833 3.12 0.00 33.85 2.90
6626 7824 1.144708 TCAGGTGCAATCTTGGGTCAA 59.855 47.619 0.00 0.00 0.00 3.18
6765 7963 3.731652 TCGGAGAAGGTAACGAAACAA 57.268 42.857 0.00 0.00 46.39 2.83
6835 8050 3.730761 CCGGTGAGCAGTTGCAGC 61.731 66.667 6.90 0.00 45.16 5.25
6945 8164 4.305989 ACTTTGCAAGAAATTTCTCGCA 57.694 36.364 26.09 26.09 44.77 5.10
6967 8186 2.477525 GCTAGAGGTAGTCGTGGTTTCG 60.478 54.545 0.00 0.00 0.00 3.46
7005 8224 8.289618 TCTTTCAGTATGTTAAGTTGTCATTGC 58.710 33.333 1.16 0.00 37.40 3.56
7006 8225 7.503521 TTCAGTATGTTAAGTTGTCATTGCA 57.496 32.000 0.00 0.00 37.40 4.08
7007 8226 6.898041 TCAGTATGTTAAGTTGTCATTGCAC 58.102 36.000 0.00 0.00 37.40 4.57
7008 8227 6.484977 TCAGTATGTTAAGTTGTCATTGCACA 59.515 34.615 0.00 0.00 37.40 4.57
7010 8229 3.963665 TGTTAAGTTGTCATTGCACAGC 58.036 40.909 0.00 0.00 0.00 4.40
7013 8232 1.683943 AGTTGTCATTGCACAGCAGT 58.316 45.000 0.00 0.00 40.61 4.40
7014 8233 2.849942 AGTTGTCATTGCACAGCAGTA 58.150 42.857 0.00 0.00 40.61 2.74
7015 8234 2.810274 AGTTGTCATTGCACAGCAGTAG 59.190 45.455 0.00 0.00 40.61 2.57
7069 8304 1.971962 CTTTTCGCGCAACATGTTCTC 59.028 47.619 8.48 2.68 0.00 2.87
7079 8314 3.365868 GCAACATGTTCTCCGTATTTGCA 60.366 43.478 8.48 0.00 38.36 4.08
7107 8342 4.569162 TGTTGTTTCTGTACTCTCGTTTGG 59.431 41.667 0.00 0.00 0.00 3.28
7196 8431 0.035739 GGTGTTTCCCGCCTTACTGA 59.964 55.000 0.00 0.00 40.81 3.41
7425 8664 1.473677 CTTTGATGCGCAGGATTTCCA 59.526 47.619 18.32 0.00 40.04 3.53
7460 8699 5.049405 AGCTACAAACACAATACTGAAGTGC 60.049 40.000 0.00 0.00 36.76 4.40
7535 8775 3.194116 CCAGGTGATGTTTTCTCCAATGG 59.806 47.826 0.00 0.00 39.94 3.16
7536 8776 4.081406 CAGGTGATGTTTTCTCCAATGGA 58.919 43.478 0.48 0.48 39.94 3.41
7537 8777 4.082125 AGGTGATGTTTTCTCCAATGGAC 58.918 43.478 0.00 0.00 39.94 4.02
7538 8778 3.826157 GGTGATGTTTTCTCCAATGGACA 59.174 43.478 0.00 0.00 37.83 4.02
7539 8779 4.463891 GGTGATGTTTTCTCCAATGGACAT 59.536 41.667 0.00 0.00 37.83 3.06
7540 8780 5.404946 GTGATGTTTTCTCCAATGGACATG 58.595 41.667 8.08 0.00 0.00 3.21
7541 8781 5.047802 GTGATGTTTTCTCCAATGGACATGT 60.048 40.000 8.08 0.00 0.00 3.21
7542 8782 6.150976 GTGATGTTTTCTCCAATGGACATGTA 59.849 38.462 8.08 0.00 0.00 2.29
7543 8783 6.718912 TGATGTTTTCTCCAATGGACATGTAA 59.281 34.615 8.08 0.00 0.00 2.41
7544 8784 7.396907 TGATGTTTTCTCCAATGGACATGTAAT 59.603 33.333 8.08 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.358737 GGCGGCGGCTTAGCATAT 60.359 61.111 27.22 0.00 39.81 1.78
32 33 3.807631 CTGGCGGCGGCTTAGCATA 62.808 63.158 33.21 11.13 39.81 3.14
58 59 0.941542 TAATAAGCCGGCAACATCGC 59.058 50.000 31.54 0.00 0.00 4.58
106 107 0.944386 ATGACGCCACAACAAGACAC 59.056 50.000 0.00 0.00 0.00 3.67
177 179 7.318141 CCGTCAGACCAAAATACTACTCTAAA 58.682 38.462 0.00 0.00 0.00 1.85
180 182 4.381718 GCCGTCAGACCAAAATACTACTCT 60.382 45.833 0.00 0.00 0.00 3.24
181 183 3.864003 GCCGTCAGACCAAAATACTACTC 59.136 47.826 0.00 0.00 0.00 2.59
182 184 3.514309 AGCCGTCAGACCAAAATACTACT 59.486 43.478 0.00 0.00 0.00 2.57
183 185 3.858247 AGCCGTCAGACCAAAATACTAC 58.142 45.455 0.00 0.00 0.00 2.73
223 225 1.135746 GCTCATCAGTCAAGCACTTGC 60.136 52.381 5.49 0.00 40.24 4.01
229 231 4.633126 TCAACATAAGCTCATCAGTCAAGC 59.367 41.667 0.00 0.00 36.27 4.01
233 235 5.641209 ACACTTCAACATAAGCTCATCAGTC 59.359 40.000 0.00 0.00 0.00 3.51
283 285 3.622166 TTGGAACGGAGGGAGTATTTC 57.378 47.619 0.00 0.00 0.00 2.17
285 287 4.586306 ATTTTGGAACGGAGGGAGTATT 57.414 40.909 0.00 0.00 0.00 1.89
286 288 4.966805 TCTATTTTGGAACGGAGGGAGTAT 59.033 41.667 0.00 0.00 0.00 2.12
287 289 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
288 290 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
289 291 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
290 292 3.118038 CCATCTATTTTGGAACGGAGGGA 60.118 47.826 0.00 0.00 36.26 4.20
291 293 3.214328 CCATCTATTTTGGAACGGAGGG 58.786 50.000 0.00 0.00 36.26 4.30
293 295 3.545703 AGCCATCTATTTTGGAACGGAG 58.454 45.455 0.00 0.00 36.26 4.63
294 296 3.054728 TGAGCCATCTATTTTGGAACGGA 60.055 43.478 0.00 0.00 36.26 4.69
295 297 3.278574 TGAGCCATCTATTTTGGAACGG 58.721 45.455 0.00 0.00 36.26 4.44
296 298 4.396166 AGTTGAGCCATCTATTTTGGAACG 59.604 41.667 0.00 0.00 36.26 3.95
297 299 5.904362 AGTTGAGCCATCTATTTTGGAAC 57.096 39.130 0.00 0.00 36.26 3.62
298 300 6.267471 ACAAAGTTGAGCCATCTATTTTGGAA 59.733 34.615 10.53 0.00 40.00 3.53
299 301 5.774690 ACAAAGTTGAGCCATCTATTTTGGA 59.225 36.000 10.53 0.00 40.00 3.53
300 302 6.029346 ACAAAGTTGAGCCATCTATTTTGG 57.971 37.500 10.53 0.00 40.00 3.28
301 303 7.820648 AGTACAAAGTTGAGCCATCTATTTTG 58.179 34.615 0.00 6.27 40.82 2.44
302 304 9.515226 TTAGTACAAAGTTGAGCCATCTATTTT 57.485 29.630 0.00 0.00 0.00 1.82
303 305 8.947115 GTTAGTACAAAGTTGAGCCATCTATTT 58.053 33.333 0.00 0.00 0.00 1.40
304 306 8.322091 AGTTAGTACAAAGTTGAGCCATCTATT 58.678 33.333 0.00 0.00 0.00 1.73
305 307 7.852263 AGTTAGTACAAAGTTGAGCCATCTAT 58.148 34.615 0.00 0.00 0.00 1.98
306 308 7.241042 AGTTAGTACAAAGTTGAGCCATCTA 57.759 36.000 0.00 0.00 0.00 1.98
308 310 6.803154 AAGTTAGTACAAAGTTGAGCCATC 57.197 37.500 0.00 0.00 0.00 3.51
309 311 8.685838 TTAAAGTTAGTACAAAGTTGAGCCAT 57.314 30.769 0.00 0.00 0.00 4.40
310 312 8.685838 ATTAAAGTTAGTACAAAGTTGAGCCA 57.314 30.769 0.00 0.00 0.00 4.75
356 358 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
357 359 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
358 360 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
359 361 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
360 362 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
361 363 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
362 364 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
363 365 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
364 366 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
365 367 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
366 368 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
367 369 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
368 370 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
369 371 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
370 372 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
371 373 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
372 374 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
373 375 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
374 376 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
375 377 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
376 378 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
377 379 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
378 380 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
379 381 2.450476 GTACTACTCCCTCCGTTCCAA 58.550 52.381 0.00 0.00 0.00 3.53
380 382 1.679944 CGTACTACTCCCTCCGTTCCA 60.680 57.143 0.00 0.00 0.00 3.53
381 383 1.020437 CGTACTACTCCCTCCGTTCC 58.980 60.000 0.00 0.00 0.00 3.62
382 384 1.020437 CCGTACTACTCCCTCCGTTC 58.980 60.000 0.00 0.00 0.00 3.95
383 385 0.620556 TCCGTACTACTCCCTCCGTT 59.379 55.000 0.00 0.00 0.00 4.44
384 386 0.842635 ATCCGTACTACTCCCTCCGT 59.157 55.000 0.00 0.00 0.00 4.69
385 387 1.236628 CATCCGTACTACTCCCTCCG 58.763 60.000 0.00 0.00 0.00 4.63
386 388 0.960286 GCATCCGTACTACTCCCTCC 59.040 60.000 0.00 0.00 0.00 4.30
387 389 1.688772 TGCATCCGTACTACTCCCTC 58.311 55.000 0.00 0.00 0.00 4.30
388 390 2.032620 CTTGCATCCGTACTACTCCCT 58.967 52.381 0.00 0.00 0.00 4.20
389 391 2.029623 TCTTGCATCCGTACTACTCCC 58.970 52.381 0.00 0.00 0.00 4.30
390 392 4.202121 TGAATCTTGCATCCGTACTACTCC 60.202 45.833 0.00 0.00 0.00 3.85
391 393 4.933330 TGAATCTTGCATCCGTACTACTC 58.067 43.478 0.00 0.00 0.00 2.59
392 394 5.537300 ATGAATCTTGCATCCGTACTACT 57.463 39.130 0.00 0.00 0.00 2.57
393 395 5.523916 ACAATGAATCTTGCATCCGTACTAC 59.476 40.000 0.00 0.00 0.00 2.73
394 396 5.670485 ACAATGAATCTTGCATCCGTACTA 58.330 37.500 0.00 0.00 0.00 1.82
395 397 4.517285 ACAATGAATCTTGCATCCGTACT 58.483 39.130 0.00 0.00 0.00 2.73
396 398 4.882671 ACAATGAATCTTGCATCCGTAC 57.117 40.909 0.00 0.00 0.00 3.67
399 401 4.487948 ACAAACAATGAATCTTGCATCCG 58.512 39.130 0.00 0.00 0.00 4.18
429 431 8.459911 TTGGTCGAAGTTATGATCAGATAGTA 57.540 34.615 0.09 0.00 0.00 1.82
435 437 4.183865 TGCTTGGTCGAAGTTATGATCAG 58.816 43.478 0.09 0.00 33.73 2.90
444 446 1.412710 TGTTCTCTGCTTGGTCGAAGT 59.587 47.619 0.00 0.00 33.73 3.01
448 450 1.800805 ACATGTTCTCTGCTTGGTCG 58.199 50.000 0.00 0.00 0.00 4.79
471 473 8.581057 AGTCTTATCACATAACTTATTCTGCG 57.419 34.615 0.00 0.00 0.00 5.18
570 572 2.672961 TACACAGCTTGGAAGGATCG 57.327 50.000 0.00 0.00 0.00 3.69
586 588 0.460811 CAGCTCAGCTCGGCATTACA 60.461 55.000 0.00 0.00 36.40 2.41
594 596 2.802816 AGTTTACAAACAGCTCAGCTCG 59.197 45.455 0.00 0.00 41.30 5.03
595 597 4.820284 AAGTTTACAAACAGCTCAGCTC 57.180 40.909 0.00 0.00 41.30 4.09
669 671 4.567159 CGTGCTTTCTCCCTACAATAGTTC 59.433 45.833 0.00 0.00 0.00 3.01
677 679 2.457080 GCACGTGCTTTCTCCCTAC 58.543 57.895 32.55 0.00 38.21 3.18
688 690 1.008538 CAACCCAAAGAGCACGTGC 60.009 57.895 32.79 32.79 42.49 5.34
689 691 1.654220 CCAACCCAAAGAGCACGTG 59.346 57.895 12.28 12.28 0.00 4.49
691 693 1.106944 AACCCAACCCAAAGAGCACG 61.107 55.000 0.00 0.00 0.00 5.34
692 694 0.389025 CAACCCAACCCAAAGAGCAC 59.611 55.000 0.00 0.00 0.00 4.40
693 695 0.032615 ACAACCCAACCCAAAGAGCA 60.033 50.000 0.00 0.00 0.00 4.26
694 696 1.119684 AACAACCCAACCCAAAGAGC 58.880 50.000 0.00 0.00 0.00 4.09
695 697 5.545063 AAATAACAACCCAACCCAAAGAG 57.455 39.130 0.00 0.00 0.00 2.85
721 933 6.700081 TGATTATGGAATGTGCTACGAGTAAC 59.300 38.462 0.00 0.00 0.00 2.50
748 960 5.105513 TGACAAGAGCGAGATATGTTTACCA 60.106 40.000 0.00 0.00 0.00 3.25
762 974 3.114616 CTGGCGGTGACAAGAGCG 61.115 66.667 0.00 0.00 39.82 5.03
773 985 1.163420 TAGCACACAAACACTGGCGG 61.163 55.000 0.00 0.00 0.00 6.13
774 986 0.660488 TTAGCACACAAACACTGGCG 59.340 50.000 0.00 0.00 0.00 5.69
775 987 1.600413 GCTTAGCACACAAACACTGGC 60.600 52.381 0.00 0.00 0.00 4.85
776 988 1.001378 GGCTTAGCACACAAACACTGG 60.001 52.381 6.53 0.00 0.00 4.00
777 989 1.334059 CGGCTTAGCACACAAACACTG 60.334 52.381 6.53 0.00 0.00 3.66
778 990 0.944386 CGGCTTAGCACACAAACACT 59.056 50.000 6.53 0.00 0.00 3.55
779 991 0.660300 GCGGCTTAGCACACAAACAC 60.660 55.000 6.53 0.00 37.05 3.32
780 992 1.652012 GCGGCTTAGCACACAAACA 59.348 52.632 6.53 0.00 37.05 2.83
781 993 1.081442 GGCGGCTTAGCACACAAAC 60.081 57.895 6.53 0.00 39.27 2.93
782 994 2.612567 CGGCGGCTTAGCACACAAA 61.613 57.895 6.53 0.00 39.27 2.83
783 995 3.047280 CGGCGGCTTAGCACACAA 61.047 61.111 6.53 0.00 39.27 3.33
790 1002 2.644555 ATACACTGGCGGCGGCTTAG 62.645 60.000 33.21 24.88 39.81 2.18
791 1003 2.727392 ATACACTGGCGGCGGCTTA 61.727 57.895 33.21 18.75 39.81 3.09
792 1004 4.096003 ATACACTGGCGGCGGCTT 62.096 61.111 33.21 18.14 39.81 4.35
793 1005 4.838152 CATACACTGGCGGCGGCT 62.838 66.667 33.21 16.41 39.81 5.52
795 1007 4.838152 AGCATACACTGGCGGCGG 62.838 66.667 17.49 17.49 34.54 6.13
796 1008 1.922135 AAAAGCATACACTGGCGGCG 61.922 55.000 0.51 0.51 34.54 6.46
797 1009 1.091537 TAAAAGCATACACTGGCGGC 58.908 50.000 0.00 0.00 34.54 6.53
798 1010 1.400494 GGTAAAAGCATACACTGGCGG 59.600 52.381 0.00 0.00 34.54 6.13
799 1011 2.080693 TGGTAAAAGCATACACTGGCG 58.919 47.619 0.00 0.00 34.54 5.69
800 1012 3.081804 ACTGGTAAAAGCATACACTGGC 58.918 45.455 0.00 0.00 0.00 4.85
801 1013 4.072131 ACACTGGTAAAAGCATACACTGG 58.928 43.478 0.00 0.00 0.00 4.00
802 1014 6.985188 ATACACTGGTAAAAGCATACACTG 57.015 37.500 0.00 0.00 32.19 3.66
803 1015 6.755141 CGTATACACTGGTAAAAGCATACACT 59.245 38.462 3.32 0.00 32.19 3.55
804 1016 6.753279 TCGTATACACTGGTAAAAGCATACAC 59.247 38.462 3.32 0.00 32.19 2.90
805 1017 6.865411 TCGTATACACTGGTAAAAGCATACA 58.135 36.000 3.32 0.00 32.19 2.29
806 1018 7.760131 TTCGTATACACTGGTAAAAGCATAC 57.240 36.000 3.32 0.00 32.19 2.39
807 1019 8.418662 AGATTCGTATACACTGGTAAAAGCATA 58.581 33.333 3.32 0.00 32.19 3.14
808 1020 7.272978 AGATTCGTATACACTGGTAAAAGCAT 58.727 34.615 3.32 0.00 32.19 3.79
809 1021 6.636705 AGATTCGTATACACTGGTAAAAGCA 58.363 36.000 3.32 0.00 32.19 3.91
810 1022 7.399523 CAAGATTCGTATACACTGGTAAAAGC 58.600 38.462 3.32 0.00 32.19 3.51
811 1023 7.064134 TGCAAGATTCGTATACACTGGTAAAAG 59.936 37.037 3.32 0.00 32.19 2.27
812 1024 6.874664 TGCAAGATTCGTATACACTGGTAAAA 59.125 34.615 3.32 0.00 32.19 1.52
813 1025 6.399743 TGCAAGATTCGTATACACTGGTAAA 58.600 36.000 3.32 0.00 32.19 2.01
814 1026 5.968254 TGCAAGATTCGTATACACTGGTAA 58.032 37.500 3.32 0.00 32.19 2.85
815 1027 5.585820 TGCAAGATTCGTATACACTGGTA 57.414 39.130 3.32 0.00 0.00 3.25
816 1028 4.465632 TGCAAGATTCGTATACACTGGT 57.534 40.909 3.32 0.00 0.00 4.00
817 1029 4.449068 GGATGCAAGATTCGTATACACTGG 59.551 45.833 3.32 0.00 0.00 4.00
818 1030 5.049828 TGGATGCAAGATTCGTATACACTG 58.950 41.667 3.32 0.00 0.00 3.66
819 1031 5.276461 TGGATGCAAGATTCGTATACACT 57.724 39.130 3.32 0.00 0.00 3.55
820 1032 7.622256 GCTTATGGATGCAAGATTCGTATACAC 60.622 40.741 3.32 0.00 0.00 2.90
821 1033 6.368791 GCTTATGGATGCAAGATTCGTATACA 59.631 38.462 3.32 0.00 0.00 2.29
822 1034 6.368791 TGCTTATGGATGCAAGATTCGTATAC 59.631 38.462 0.00 0.00 36.15 1.47
823 1035 6.463360 TGCTTATGGATGCAAGATTCGTATA 58.537 36.000 0.00 0.00 36.15 1.47
824 1036 5.308014 TGCTTATGGATGCAAGATTCGTAT 58.692 37.500 0.00 0.00 36.15 3.06
825 1037 4.702831 TGCTTATGGATGCAAGATTCGTA 58.297 39.130 0.00 0.00 36.15 3.43
826 1038 3.544684 TGCTTATGGATGCAAGATTCGT 58.455 40.909 0.00 0.00 36.15 3.85
827 1039 4.761235 ATGCTTATGGATGCAAGATTCG 57.239 40.909 0.00 0.00 42.74 3.34
831 1043 9.605275 GAGTTATATATGCTTATGGATGCAAGA 57.395 33.333 0.00 0.00 42.74 3.02
832 1044 9.610705 AGAGTTATATATGCTTATGGATGCAAG 57.389 33.333 0.00 0.00 42.74 4.01
833 1045 9.964354 AAGAGTTATATATGCTTATGGATGCAA 57.036 29.630 0.00 0.00 42.74 4.08
862 1074 4.267928 GCGAGTAGGTAAAAGCATACACTG 59.732 45.833 0.00 0.00 0.00 3.66
863 1075 4.430908 GCGAGTAGGTAAAAGCATACACT 58.569 43.478 0.00 0.00 0.00 3.55
864 1076 3.554731 GGCGAGTAGGTAAAAGCATACAC 59.445 47.826 0.00 0.00 0.00 2.90
865 1077 3.431207 GGGCGAGTAGGTAAAAGCATACA 60.431 47.826 0.00 0.00 0.00 2.29
866 1078 3.129109 GGGCGAGTAGGTAAAAGCATAC 58.871 50.000 0.00 0.00 0.00 2.39
867 1079 2.223876 CGGGCGAGTAGGTAAAAGCATA 60.224 50.000 0.00 0.00 0.00 3.14
868 1080 1.472728 CGGGCGAGTAGGTAAAAGCAT 60.473 52.381 0.00 0.00 0.00 3.79
869 1081 0.108520 CGGGCGAGTAGGTAAAAGCA 60.109 55.000 0.00 0.00 0.00 3.91
870 1082 1.426816 GCGGGCGAGTAGGTAAAAGC 61.427 60.000 0.00 0.00 0.00 3.51
871 1083 0.175073 AGCGGGCGAGTAGGTAAAAG 59.825 55.000 0.00 0.00 0.00 2.27
872 1084 0.174162 GAGCGGGCGAGTAGGTAAAA 59.826 55.000 0.00 0.00 0.00 1.52
883 1096 0.171007 AAAAATGATGTGAGCGGGCG 59.829 50.000 0.00 0.00 0.00 6.13
920 1140 2.502295 CAAAGCTTGCTTCTGGAGACT 58.498 47.619 8.39 0.00 0.00 3.24
944 1164 6.091849 CCTTCCGAATGCTCATTGATATGTAG 59.908 42.308 0.00 0.00 33.34 2.74
945 1165 5.934043 CCTTCCGAATGCTCATTGATATGTA 59.066 40.000 0.00 0.00 33.34 2.29
946 1166 4.758674 CCTTCCGAATGCTCATTGATATGT 59.241 41.667 0.00 0.00 33.34 2.29
947 1167 4.999311 TCCTTCCGAATGCTCATTGATATG 59.001 41.667 0.00 0.00 0.00 1.78
948 1168 5.012458 TCTCCTTCCGAATGCTCATTGATAT 59.988 40.000 0.00 0.00 0.00 1.63
949 1169 4.344968 TCTCCTTCCGAATGCTCATTGATA 59.655 41.667 0.00 0.00 0.00 2.15
950 1170 3.135348 TCTCCTTCCGAATGCTCATTGAT 59.865 43.478 0.00 0.00 0.00 2.57
951 1171 2.501316 TCTCCTTCCGAATGCTCATTGA 59.499 45.455 0.00 0.00 0.00 2.57
952 1172 2.910199 TCTCCTTCCGAATGCTCATTG 58.090 47.619 0.00 0.00 0.00 2.82
953 1173 3.634397 TTCTCCTTCCGAATGCTCATT 57.366 42.857 0.00 0.00 0.00 2.57
963 1184 7.276658 GCTATATGTATGTCAATTCTCCTTCCG 59.723 40.741 0.00 0.00 0.00 4.30
1026 1248 1.489481 CAGGCTCACTGTATCCCTCA 58.511 55.000 0.00 0.00 42.42 3.86
1052 1274 7.255277 CGACTGAACTAGATCCATCACTATTCA 60.255 40.741 0.00 0.00 0.00 2.57
1107 1329 9.212641 AGTCGAGTCATATGGAAAATATCATTG 57.787 33.333 2.13 0.00 0.00 2.82
1185 1407 3.582780 CCTTCCACGTAACAACCTAGTC 58.417 50.000 0.00 0.00 0.00 2.59
1305 1527 5.647658 TGAAACATAAGCTCGTGAATCCATT 59.352 36.000 5.41 0.00 0.00 3.16
1449 1672 6.488683 TGAAAACAAAAGGACGATTAGGACAT 59.511 34.615 0.00 0.00 0.00 3.06
1451 1674 6.308371 TGAAAACAAAAGGACGATTAGGAC 57.692 37.500 0.00 0.00 0.00 3.85
1641 1864 7.343057 GGGGGAAATTAAGATGAACTGAAAGAT 59.657 37.037 0.00 0.00 37.43 2.40
1648 1871 7.184753 AGAGTTAGGGGGAAATTAAGATGAACT 59.815 37.037 0.00 0.00 0.00 3.01
1675 1898 2.696707 CCAAAACTGAGCCCATGCATAT 59.303 45.455 0.00 0.00 41.13 1.78
1700 1923 9.837525 ATAAAAGTTGTACTAGAGAACTACACG 57.162 33.333 0.00 0.00 40.66 4.49
1713 1936 7.334421 ACTGCATGAATCGATAAAAGTTGTACT 59.666 33.333 0.00 0.00 0.00 2.73
1819 2042 8.847196 GTTCCCCAAATCAGATACCTTATAAAC 58.153 37.037 0.00 0.00 0.00 2.01
1856 2891 4.062991 AGTAAGAACTAAAAGCACACCCG 58.937 43.478 0.00 0.00 32.84 5.28
1872 2907 8.874744 ATGTTTCCACTACTAGTACAGTAAGA 57.125 34.615 0.00 0.00 39.28 2.10
1949 2984 7.056844 AGCTACTGGAGTTATCTTATCAACC 57.943 40.000 0.00 0.00 0.00 3.77
1950 2985 8.950208 AAAGCTACTGGAGTTATCTTATCAAC 57.050 34.615 0.00 0.00 0.00 3.18
1967 3002 7.341445 AGATCAGATTCGAACTAAAGCTACT 57.659 36.000 0.00 0.00 0.00 2.57
1980 3015 5.419542 TGGTAACCAGAAAGATCAGATTCG 58.580 41.667 0.00 0.00 0.00 3.34
2058 3093 8.904099 ATGAAGTTAGGCTACACAATAATACC 57.096 34.615 0.00 0.00 0.00 2.73
2059 3094 8.700644 CGATGAAGTTAGGCTACACAATAATAC 58.299 37.037 0.00 0.00 0.00 1.89
2082 3117 4.720273 AGATAAAGGGAACAGGTAACCGAT 59.280 41.667 0.00 0.00 37.17 4.18
2109 3144 3.815856 TCCAACTTTGCATGCAGAAAA 57.184 38.095 21.50 11.74 0.00 2.29
2113 3148 3.185594 CACAAATCCAACTTTGCATGCAG 59.814 43.478 21.50 13.01 39.26 4.41
2219 3254 7.654923 TCACAGTGACATTAGCATATGATTCTC 59.345 37.037 6.97 0.00 0.00 2.87
2254 3289 1.475682 CCTGCAGAAGGGCAAATCTTC 59.524 52.381 17.39 0.00 44.40 2.87
2369 3405 8.409358 ACTTAAAATGCCTGAAGTCATAAAGT 57.591 30.769 0.00 0.00 0.00 2.66
2542 3580 2.479566 TGGATGTCCTGCAGAAAGAC 57.520 50.000 17.39 14.70 36.82 3.01
2697 3735 3.541903 GCAAACGCAATGTCACTTTGTTG 60.542 43.478 5.39 3.78 0.00 3.33
2743 3781 8.712228 AAAGAAGATACAACCCAAGAGAAAAT 57.288 30.769 0.00 0.00 0.00 1.82
2821 3859 7.390718 ACAACCAACTTAAGATCATTGGACTAC 59.609 37.037 22.72 0.00 43.66 2.73
2914 3963 1.074775 GTCACCCATGCCCACTTCA 59.925 57.895 0.00 0.00 0.00 3.02
2984 4033 9.081204 CCATTATCCATCTTCAAAATCACCATA 57.919 33.333 0.00 0.00 0.00 2.74
2985 4034 7.566138 ACCATTATCCATCTTCAAAATCACCAT 59.434 33.333 0.00 0.00 0.00 3.55
2986 4035 6.896860 ACCATTATCCATCTTCAAAATCACCA 59.103 34.615 0.00 0.00 0.00 4.17
2987 4036 7.352079 ACCATTATCCATCTTCAAAATCACC 57.648 36.000 0.00 0.00 0.00 4.02
3070 4119 2.489329 CAAGGAGTGCCATTTACACCTG 59.511 50.000 0.00 0.00 38.80 4.00
3110 4159 2.515523 ATGTCGGCTGATGGCTGC 60.516 61.111 0.00 0.00 46.32 5.25
3119 4168 5.525378 GTCAGAGATTAAATTGATGTCGGCT 59.475 40.000 0.00 0.00 0.00 5.52
3122 4171 7.545362 AAGGTCAGAGATTAAATTGATGTCG 57.455 36.000 0.00 0.00 0.00 4.35
3171 4220 2.228822 ACATGTCCTGTCGAAAATTGGC 59.771 45.455 0.00 0.00 29.94 4.52
3185 4234 0.391130 TTAGGTGCAGCGACATGTCC 60.391 55.000 20.03 12.53 0.00 4.02
3225 4274 7.065216 ACAAAATATCGTCAGAGACACATTG 57.935 36.000 0.00 0.00 32.09 2.82
3226 4275 7.672983 AACAAAATATCGTCAGAGACACATT 57.327 32.000 0.00 0.00 32.09 2.71
3289 4338 7.197703 CCAATGGTTTAGTTGTACGTTCTTTT 58.802 34.615 0.00 0.00 0.00 2.27
3567 4627 7.147794 TGCAAATTTTCATCTGCTCCTGATAAT 60.148 33.333 0.00 0.00 35.78 1.28
3616 4676 1.227234 GTGCCTGTGCCCAACAAAC 60.227 57.895 0.00 0.00 38.67 2.93
3628 4688 1.002033 GAGCAAAACAGAGTGTGCCTG 60.002 52.381 0.00 0.00 37.73 4.85
3631 4691 3.111098 CAAAGAGCAAAACAGAGTGTGC 58.889 45.455 0.00 0.00 37.26 4.57
3634 4694 5.032863 CAGAACAAAGAGCAAAACAGAGTG 58.967 41.667 0.00 0.00 0.00 3.51
3711 4771 8.595362 ATTAAGTTTCCAGGCTAGCTAAAATT 57.405 30.769 15.72 15.99 0.00 1.82
3755 4815 8.447833 CAATCTAAACTGCCAAAACGTCTTATA 58.552 33.333 0.00 0.00 0.00 0.98
4035 5096 5.751028 CCAGGAAAAAGCAATCACGTAAAAA 59.249 36.000 0.00 0.00 0.00 1.94
4048 5110 4.568956 ACATAATGTTGCCAGGAAAAAGC 58.431 39.130 0.00 0.00 0.00 3.51
4096 5158 8.021973 CAGGAAATATGAGAATAGCAATTCAGC 58.978 37.037 1.35 0.00 43.44 4.26
4165 5227 4.079558 AGTCATTCAGCAATATGGAGGGTT 60.080 41.667 0.00 0.00 0.00 4.11
4190 5252 7.901029 TGGAAACAAAAATATCCAAGCATGTA 58.099 30.769 0.00 0.00 38.95 2.29
4193 5255 7.008021 ACTGGAAACAAAAATATCCAAGCAT 57.992 32.000 0.00 0.00 41.20 3.79
4286 5348 3.375299 GGAATATTAGCCGGCACATCATC 59.625 47.826 31.54 18.86 0.00 2.92
4321 5383 2.943033 CCAGGTATAAGAAAAGGCCGTG 59.057 50.000 0.00 0.00 0.00 4.94
4322 5384 2.841881 TCCAGGTATAAGAAAAGGCCGT 59.158 45.455 0.00 0.00 0.00 5.68
4323 5385 3.553828 TCCAGGTATAAGAAAAGGCCG 57.446 47.619 0.00 0.00 0.00 6.13
4324 5386 7.523873 GCATATTTCCAGGTATAAGAAAAGGCC 60.524 40.741 0.00 0.00 33.53 5.19
4326 5388 8.697507 AGCATATTTCCAGGTATAAGAAAAGG 57.302 34.615 0.00 0.00 33.53 3.11
4332 5394 6.568462 CGCCAAAGCATATTTCCAGGTATAAG 60.568 42.308 0.00 0.00 39.83 1.73
4357 5420 9.455847 GAACCATCTCATTTTATTTATGCACTC 57.544 33.333 0.00 0.00 0.00 3.51
4444 5521 4.937015 GTGAAAAACGGTAGGTAGGCAATA 59.063 41.667 0.00 0.00 0.00 1.90
4448 5525 2.740447 CTGTGAAAAACGGTAGGTAGGC 59.260 50.000 0.00 0.00 0.00 3.93
4630 5711 6.161855 AGCTCAATAACAGGATTGTATCGA 57.838 37.500 0.00 0.00 37.92 3.59
4654 5735 6.865411 ACCATTTTTAAACTACACGTTTGGT 58.135 32.000 0.00 0.00 45.10 3.67
4791 5873 2.143925 GCTTGTCCTGTTGTCCACTAC 58.856 52.381 0.00 0.00 0.00 2.73
4860 5942 5.767816 AACTTAGCTAACACAAAGGTTGG 57.232 39.130 0.86 0.00 34.12 3.77
4948 6030 2.968574 CAGGCTACCAGGATCACATACT 59.031 50.000 0.00 0.00 0.00 2.12
5073 6155 9.740239 ATCTTTTCCATTTGATATGAAACATCG 57.260 29.630 0.00 0.00 0.00 3.84
5215 6297 5.242838 GGATCAGTATAGCTCTGCAGTAAGT 59.757 44.000 14.67 0.00 33.48 2.24
5235 6317 6.984474 TCGGAACTGTATCAAACAATAGGATC 59.016 38.462 0.00 0.00 37.74 3.36
5239 6321 8.286800 TGTTTTCGGAACTGTATCAAACAATAG 58.713 33.333 0.00 0.00 37.74 1.73
5381 6463 5.106317 TGTGGGAGAAAAATAGCAACGAATC 60.106 40.000 0.00 0.00 0.00 2.52
5479 6564 1.852965 AGCACAGGGTATTAGGCCATT 59.147 47.619 5.01 0.00 0.00 3.16
5482 6567 1.810412 CGAAGCACAGGGTATTAGGCC 60.810 57.143 0.00 0.00 0.00 5.19
5484 6569 2.981859 ACGAAGCACAGGGTATTAGG 57.018 50.000 0.00 0.00 0.00 2.69
5572 6657 3.303593 GCCATGCATGTTGAATAGAGACG 60.304 47.826 24.58 6.20 0.00 4.18
5585 6670 1.069090 GAATGGGCTGCCATGCATG 59.931 57.895 22.05 20.19 38.13 4.06
5586 6671 0.978667 TTGAATGGGCTGCCATGCAT 60.979 50.000 22.05 11.94 38.13 3.96
5587 6672 1.609635 CTTGAATGGGCTGCCATGCA 61.610 55.000 22.05 13.61 34.24 3.96
5588 6673 1.143183 CTTGAATGGGCTGCCATGC 59.857 57.895 22.05 11.15 0.00 4.06
5593 6678 3.062042 CAAAAGAACTTGAATGGGCTGC 58.938 45.455 0.00 0.00 0.00 5.25
5695 6838 9.823647 TTAGCCTAAATTTCTCATCAAGAGTAG 57.176 33.333 0.00 0.00 44.98 2.57
5718 6861 7.429340 GCGTCCAGATTTGTTACATGAAATTAG 59.571 37.037 0.00 0.00 0.00 1.73
5720 6863 6.071952 AGCGTCCAGATTTGTTACATGAAATT 60.072 34.615 0.00 0.00 0.00 1.82
5730 6873 5.699839 GACATAAAAGCGTCCAGATTTGTT 58.300 37.500 0.00 0.00 38.61 2.83
5798 6941 3.074412 CTCCATCACTTTTTACAGCCGT 58.926 45.455 0.00 0.00 0.00 5.68
5800 6943 5.003804 TCTTCTCCATCACTTTTTACAGCC 58.996 41.667 0.00 0.00 0.00 4.85
5836 7034 3.181517 CCGTAGACTGTGTGCAATGAATG 60.182 47.826 0.00 0.00 0.00 2.67
5837 7035 3.002791 CCGTAGACTGTGTGCAATGAAT 58.997 45.455 0.00 0.00 0.00 2.57
5838 7036 2.412870 CCGTAGACTGTGTGCAATGAA 58.587 47.619 0.00 0.00 0.00 2.57
5839 7037 1.939381 GCCGTAGACTGTGTGCAATGA 60.939 52.381 0.00 0.00 0.00 2.57
5840 7038 0.443869 GCCGTAGACTGTGTGCAATG 59.556 55.000 0.00 0.00 0.00 2.82
5841 7039 0.321671 AGCCGTAGACTGTGTGCAAT 59.678 50.000 0.00 0.00 0.00 3.56
5842 7040 0.599991 CAGCCGTAGACTGTGTGCAA 60.600 55.000 0.00 0.00 0.00 4.08
5843 7041 1.006220 CAGCCGTAGACTGTGTGCA 60.006 57.895 0.00 0.00 0.00 4.57
5844 7042 1.006102 ACAGCCGTAGACTGTGTGC 60.006 57.895 0.00 0.00 46.38 4.57
5849 7047 4.304110 TCACTTTTTACAGCCGTAGACTG 58.696 43.478 0.00 0.00 41.08 3.51
5850 7048 4.595762 TCACTTTTTACAGCCGTAGACT 57.404 40.909 0.00 0.00 0.00 3.24
5851 7049 4.092968 CCATCACTTTTTACAGCCGTAGAC 59.907 45.833 0.00 0.00 0.00 2.59
5852 7050 4.020928 TCCATCACTTTTTACAGCCGTAGA 60.021 41.667 0.00 0.00 0.00 2.59
5853 7051 4.250464 TCCATCACTTTTTACAGCCGTAG 58.750 43.478 0.00 0.00 0.00 3.51
5854 7052 4.274602 TCCATCACTTTTTACAGCCGTA 57.725 40.909 0.00 0.00 0.00 4.02
5855 7053 3.134574 TCCATCACTTTTTACAGCCGT 57.865 42.857 0.00 0.00 0.00 5.68
5856 7054 5.123186 TGTTATCCATCACTTTTTACAGCCG 59.877 40.000 0.00 0.00 0.00 5.52
5857 7055 6.509418 TGTTATCCATCACTTTTTACAGCC 57.491 37.500 0.00 0.00 0.00 4.85
5858 7056 8.893727 AGTATGTTATCCATCACTTTTTACAGC 58.106 33.333 0.00 0.00 34.86 4.40
5864 7062 9.520515 ACTTCAAGTATGTTATCCATCACTTTT 57.479 29.630 0.00 0.00 34.86 2.27
5866 7064 9.601217 GTACTTCAAGTATGTTATCCATCACTT 57.399 33.333 0.00 0.00 32.65 3.16
5867 7065 8.758829 TGTACTTCAAGTATGTTATCCATCACT 58.241 33.333 0.00 0.00 32.65 3.41
5868 7066 8.942338 TGTACTTCAAGTATGTTATCCATCAC 57.058 34.615 0.00 0.00 32.65 3.06
5877 7075 9.349713 TCCAAGAAATTGTACTTCAAGTATGTT 57.650 29.630 0.00 0.00 39.55 2.71
5878 7076 8.918202 TCCAAGAAATTGTACTTCAAGTATGT 57.082 30.769 0.00 0.00 39.55 2.29
5879 7077 9.778993 CATCCAAGAAATTGTACTTCAAGTATG 57.221 33.333 0.00 0.00 39.55 2.39
5880 7078 8.462016 GCATCCAAGAAATTGTACTTCAAGTAT 58.538 33.333 0.00 0.00 39.55 2.12
5881 7079 7.446931 TGCATCCAAGAAATTGTACTTCAAGTA 59.553 33.333 0.00 0.00 39.55 2.24
5882 7080 6.265196 TGCATCCAAGAAATTGTACTTCAAGT 59.735 34.615 0.00 0.00 39.55 3.16
5883 7081 6.680810 TGCATCCAAGAAATTGTACTTCAAG 58.319 36.000 0.00 0.00 39.55 3.02
5884 7082 6.647334 TGCATCCAAGAAATTGTACTTCAA 57.353 33.333 0.00 0.00 40.53 2.69
5885 7083 6.839124 ATGCATCCAAGAAATTGTACTTCA 57.161 33.333 0.00 0.00 0.00 3.02
5886 7084 7.276438 GGAAATGCATCCAAGAAATTGTACTTC 59.724 37.037 0.00 0.00 39.42 3.01
5887 7085 7.038799 AGGAAATGCATCCAAGAAATTGTACTT 60.039 33.333 9.02 0.00 42.27 2.24
5888 7086 6.438425 AGGAAATGCATCCAAGAAATTGTACT 59.562 34.615 9.02 0.00 42.27 2.73
5889 7087 6.633856 AGGAAATGCATCCAAGAAATTGTAC 58.366 36.000 9.02 0.00 42.27 2.90
5890 7088 6.855763 AGGAAATGCATCCAAGAAATTGTA 57.144 33.333 9.02 0.00 42.27 2.41
5891 7089 5.750352 AGGAAATGCATCCAAGAAATTGT 57.250 34.783 9.02 0.00 42.27 2.71
5892 7090 7.443259 AAAAGGAAATGCATCCAAGAAATTG 57.557 32.000 9.02 0.00 42.27 2.32
5944 7142 9.480053 CACTGGATTAACATGAAAAAGTTGAAT 57.520 29.630 0.00 0.00 0.00 2.57
5948 7146 6.183360 TGCCACTGGATTAACATGAAAAAGTT 60.183 34.615 0.00 0.00 0.00 2.66
5998 7196 6.202762 CACGTAGTAATGTTGTCATATGGCAT 59.797 38.462 11.51 4.88 41.61 4.40
6000 7198 5.751509 TCACGTAGTAATGTTGTCATATGGC 59.248 40.000 0.00 0.00 41.61 4.40
6147 7345 6.964741 TGTAAGACGTTTGTTTGACACTAA 57.035 33.333 0.00 0.00 0.00 2.24
6158 7356 7.957484 CCTCTGTATCAAAATGTAAGACGTTTG 59.043 37.037 0.00 0.00 37.39 2.93
6187 7385 4.634012 TCCAAGAGTGGCTAAAAGCTAA 57.366 40.909 0.00 0.00 45.54 3.09
6209 7407 7.715249 GGCACCTCACTGAAAGATATATGTTAA 59.285 37.037 0.00 0.00 37.43 2.01
6217 7415 3.370846 CCATGGCACCTCACTGAAAGATA 60.371 47.826 0.00 0.00 37.43 1.98
6238 7436 2.203015 ATGTATGGTCGCACGGCC 60.203 61.111 6.76 6.76 41.01 6.13
6511 7709 1.229625 AGTCCTGGACCATCTGGCA 60.230 57.895 22.81 0.00 39.32 4.92
6609 7807 2.289010 CCTTTTGACCCAAGATTGCACC 60.289 50.000 0.00 0.00 0.00 5.01
6626 7824 1.520666 CCGTGCCGAGTATCCCTTT 59.479 57.895 0.00 0.00 0.00 3.11
6765 7963 4.220821 CGTATGCACCATCTAAGGATAGGT 59.779 45.833 0.00 0.00 35.39 3.08
6835 8050 4.392445 CAGTTCTGCTTCTGAAAGGATGAG 59.608 45.833 0.00 0.00 31.87 2.90
6945 8164 2.510928 AACCACGACTACCTCTAGCT 57.489 50.000 0.00 0.00 0.00 3.32
7001 8220 0.391661 CGTCCCTACTGCTGTGCAAT 60.392 55.000 6.48 0.00 38.41 3.56
7004 8223 2.788191 AAGCGTCCCTACTGCTGTGC 62.788 60.000 6.48 0.00 36.22 4.57
7005 8224 1.016130 CAAGCGTCCCTACTGCTGTG 61.016 60.000 6.48 0.00 36.22 3.66
7006 8225 1.185618 TCAAGCGTCCCTACTGCTGT 61.186 55.000 0.66 0.66 36.22 4.40
7007 8226 0.037326 TTCAAGCGTCCCTACTGCTG 60.037 55.000 0.00 0.00 36.22 4.41
7008 8227 0.037232 GTTCAAGCGTCCCTACTGCT 60.037 55.000 0.00 0.00 37.16 4.24
7010 8229 2.163818 TTGTTCAAGCGTCCCTACTG 57.836 50.000 0.00 0.00 0.00 2.74
7069 8304 6.305399 CAGAAACAACATAGTTGCAAATACGG 59.695 38.462 9.05 7.27 28.92 4.02
7079 8314 6.746120 ACGAGAGTACAGAAACAACATAGTT 58.254 36.000 0.00 0.00 46.88 2.24
7196 8431 6.051717 GCATCCACAGAACTATAGTCACATT 58.948 40.000 5.70 0.00 0.00 2.71
7239 8474 2.941064 ACTCATCATGAACGCCTGAATG 59.059 45.455 0.00 0.00 0.00 2.67
7291 8528 7.530426 AAGCCCATAAGATAAATTCATGTCC 57.470 36.000 0.00 0.00 0.00 4.02
7295 8532 9.812347 TCACATAAGCCCATAAGATAAATTCAT 57.188 29.630 0.00 0.00 0.00 2.57
7401 8638 4.036734 GGAAATCCTGCGCATCAAAGAATA 59.963 41.667 12.24 0.00 0.00 1.75
7402 8639 3.181483 GGAAATCCTGCGCATCAAAGAAT 60.181 43.478 12.24 0.00 0.00 2.40
7403 8640 2.164219 GGAAATCCTGCGCATCAAAGAA 59.836 45.455 12.24 0.00 0.00 2.52
7404 8641 1.745087 GGAAATCCTGCGCATCAAAGA 59.255 47.619 12.24 3.41 0.00 2.52
7405 8642 1.473677 TGGAAATCCTGCGCATCAAAG 59.526 47.619 12.24 0.00 36.82 2.77
7406 8643 1.543607 TGGAAATCCTGCGCATCAAA 58.456 45.000 12.24 0.00 36.82 2.69
7408 8645 1.406180 CATTGGAAATCCTGCGCATCA 59.594 47.619 12.24 0.00 36.82 3.07
7409 8646 1.677576 TCATTGGAAATCCTGCGCATC 59.322 47.619 12.24 4.65 36.82 3.91
7410 8647 1.766494 TCATTGGAAATCCTGCGCAT 58.234 45.000 12.24 0.00 36.82 4.73
7450 8689 3.086282 TCAGACGTATGGCACTTCAGTA 58.914 45.455 10.78 0.00 0.00 2.74
7460 8699 3.832490 TCCCATAGGATTCAGACGTATGG 59.168 47.826 10.78 15.31 46.67 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.