Multiple sequence alignment - TraesCS1B01G258200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G258200 chr1B 100.000 3881 0 0 1 3881 454920092 454916212 0.000000e+00 7167.0
1 TraesCS1B01G258200 chr1B 94.278 367 18 3 238 603 670883904 670884268 3.390000e-155 558.0
2 TraesCS1B01G258200 chr1A 93.943 2493 112 16 598 3077 439932781 439930315 0.000000e+00 3731.0
3 TraesCS1B01G258200 chr1D 94.808 2292 76 13 807 3077 339966545 339964276 0.000000e+00 3533.0
4 TraesCS1B01G258200 chr7B 99.752 807 2 0 3075 3881 2922319 2923125 0.000000e+00 1480.0
5 TraesCS1B01G258200 chr4B 99.380 807 5 0 3075 3881 552775087 552774281 0.000000e+00 1463.0
6 TraesCS1B01G258200 chr4B 95.278 360 17 0 241 600 359622181 359621822 4.350000e-159 571.0
7 TraesCS1B01G258200 chr4B 95.291 361 16 1 241 601 560759183 560758824 4.350000e-159 571.0
8 TraesCS1B01G258200 chr3B 99.256 806 6 0 3076 3881 729378053 729378858 0.000000e+00 1456.0
9 TraesCS1B01G258200 chr3B 98.017 605 12 0 3080 3684 262187283 262187887 0.000000e+00 1051.0
10 TraesCS1B01G258200 chr3B 96.712 365 12 0 238 602 163718450 163718814 3.320000e-170 608.0
11 TraesCS1B01G258200 chr3B 94.550 367 18 2 239 603 584456927 584457293 2.020000e-157 566.0
12 TraesCS1B01G258200 chr3B 83.916 429 64 3 2351 2775 703995021 703995448 4.670000e-109 405.0
13 TraesCS1B01G258200 chr3B 82.237 456 61 10 1404 1859 703963996 703964431 3.660000e-100 375.0
14 TraesCS1B01G258200 chr2B 99.006 805 8 0 3073 3877 694882295 694883099 0.000000e+00 1443.0
15 TraesCS1B01G258200 chr2B 95.041 363 18 0 242 604 173628920 173628558 4.350000e-159 571.0
16 TraesCS1B01G258200 chr2B 99.471 189 1 0 3075 3263 342252364 342252176 1.030000e-90 344.0
17 TraesCS1B01G258200 chr2B 99.306 144 1 0 3075 3218 722999149 722999006 1.070000e-65 261.0
18 TraesCS1B01G258200 chr2D 97.721 746 17 0 3077 3822 185370179 185369434 0.000000e+00 1284.0
19 TraesCS1B01G258200 chr2D 91.577 558 44 3 3080 3636 642893028 642893583 0.000000e+00 767.0
20 TraesCS1B01G258200 chr4D 94.609 371 19 1 236 605 379257675 379257305 1.210000e-159 573.0
21 TraesCS1B01G258200 chr6B 94.521 365 20 0 239 603 270360298 270359934 7.280000e-157 564.0
22 TraesCS1B01G258200 chr6D 94.054 370 21 1 237 605 128549014 128548645 9.420000e-156 560.0
23 TraesCS1B01G258200 chr3A 100.000 29 0 0 202 230 558517943 558517971 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G258200 chr1B 454916212 454920092 3880 True 7167 7167 100.000 1 3881 1 chr1B.!!$R1 3880
1 TraesCS1B01G258200 chr1A 439930315 439932781 2466 True 3731 3731 93.943 598 3077 1 chr1A.!!$R1 2479
2 TraesCS1B01G258200 chr1D 339964276 339966545 2269 True 3533 3533 94.808 807 3077 1 chr1D.!!$R1 2270
3 TraesCS1B01G258200 chr7B 2922319 2923125 806 False 1480 1480 99.752 3075 3881 1 chr7B.!!$F1 806
4 TraesCS1B01G258200 chr4B 552774281 552775087 806 True 1463 1463 99.380 3075 3881 1 chr4B.!!$R2 806
5 TraesCS1B01G258200 chr3B 729378053 729378858 805 False 1456 1456 99.256 3076 3881 1 chr3B.!!$F6 805
6 TraesCS1B01G258200 chr3B 262187283 262187887 604 False 1051 1051 98.017 3080 3684 1 chr3B.!!$F2 604
7 TraesCS1B01G258200 chr2B 694882295 694883099 804 False 1443 1443 99.006 3073 3877 1 chr2B.!!$F1 804
8 TraesCS1B01G258200 chr2D 185369434 185370179 745 True 1284 1284 97.721 3077 3822 1 chr2D.!!$R1 745
9 TraesCS1B01G258200 chr2D 642893028 642893583 555 False 767 767 91.577 3080 3636 1 chr2D.!!$F1 556

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
404 405 0.034380 GGGTTAGTTCTCTTGGGCCC 60.034 60.0 17.59 17.59 0.00 5.80 F
448 449 0.336048 ACCCCTCCCATCCAAACATG 59.664 55.0 0.00 0.00 0.00 3.21 F
449 450 0.397535 CCCCTCCCATCCAAACATGG 60.398 60.0 0.00 0.00 42.91 3.66 F
450 451 0.336048 CCCTCCCATCCAAACATGGT 59.664 55.0 0.00 0.00 41.84 3.55 F
1604 1620 0.998945 AATTCCCCATCCCCCGATGT 60.999 55.0 0.00 0.00 43.87 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1540 1556 0.818296 CCGTGAAACTCGAGGGAGAT 59.182 55.000 18.41 0.0 43.27 2.75 R
1959 1975 1.065272 GGGTTAATGCCTCCCGTGTAA 60.065 52.381 0.00 0.0 0.00 2.41 R
1968 1984 1.139058 CAGTAGAGCGGGTTAATGCCT 59.861 52.381 0.00 0.0 0.00 4.75 R
2307 2323 1.300620 CTCGGTCGTGAAGTTGCCA 60.301 57.895 0.00 0.0 0.00 4.92 R
2904 2923 0.464036 CGACGGATCTGGGATTCCAA 59.536 55.000 6.47 0.0 43.51 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.616774 GCTCTTATATCTTCAGCAAAGCTT 57.383 37.500 0.00 0.00 36.40 3.74
24 25 6.657888 GCTCTTATATCTTCAGCAAAGCTTC 58.342 40.000 0.00 0.00 36.40 3.86
25 26 6.482973 GCTCTTATATCTTCAGCAAAGCTTCT 59.517 38.462 0.00 0.00 36.40 2.85
26 27 7.307337 GCTCTTATATCTTCAGCAAAGCTTCTC 60.307 40.741 0.00 0.00 36.40 2.87
27 28 6.699204 TCTTATATCTTCAGCAAAGCTTCTCG 59.301 38.462 0.00 0.00 36.40 4.04
28 29 2.820059 TCTTCAGCAAAGCTTCTCGA 57.180 45.000 0.00 0.00 36.40 4.04
29 30 3.325293 TCTTCAGCAAAGCTTCTCGAT 57.675 42.857 0.00 0.00 36.40 3.59
30 31 2.998670 TCTTCAGCAAAGCTTCTCGATG 59.001 45.455 0.00 0.54 36.40 3.84
31 32 1.081892 TCAGCAAAGCTTCTCGATGC 58.918 50.000 11.32 11.32 36.40 3.91
32 33 0.098376 CAGCAAAGCTTCTCGATGCC 59.902 55.000 14.82 0.31 36.40 4.40
33 34 0.321919 AGCAAAGCTTCTCGATGCCA 60.322 50.000 14.82 0.00 33.89 4.92
34 35 0.523072 GCAAAGCTTCTCGATGCCAA 59.477 50.000 8.58 0.00 32.53 4.52
35 36 1.467035 GCAAAGCTTCTCGATGCCAAG 60.467 52.381 8.58 0.00 32.53 3.61
36 37 1.808945 CAAAGCTTCTCGATGCCAAGT 59.191 47.619 0.00 0.00 32.53 3.16
37 38 2.191128 AAGCTTCTCGATGCCAAGTT 57.809 45.000 0.00 0.00 32.53 2.66
38 39 1.446907 AGCTTCTCGATGCCAAGTTG 58.553 50.000 0.00 0.00 32.53 3.16
39 40 0.449388 GCTTCTCGATGCCAAGTTGG 59.551 55.000 18.17 18.17 41.55 3.77
40 41 1.813513 CTTCTCGATGCCAAGTTGGT 58.186 50.000 22.85 4.08 40.46 3.67
41 42 2.154462 CTTCTCGATGCCAAGTTGGTT 58.846 47.619 22.85 11.18 40.46 3.67
42 43 2.270352 TCTCGATGCCAAGTTGGTTT 57.730 45.000 22.85 10.82 40.46 3.27
43 44 2.582052 TCTCGATGCCAAGTTGGTTTT 58.418 42.857 22.85 8.30 40.46 2.43
44 45 2.293122 TCTCGATGCCAAGTTGGTTTTG 59.707 45.455 22.85 13.91 40.46 2.44
45 46 1.339610 TCGATGCCAAGTTGGTTTTGG 59.660 47.619 22.85 9.57 46.28 3.28
50 51 1.952193 CCAAGTTGGTTTTGGCCTTG 58.048 50.000 14.21 0.00 38.73 3.61
51 52 1.209261 CCAAGTTGGTTTTGGCCTTGT 59.791 47.619 14.21 0.00 38.73 3.16
52 53 2.432510 CCAAGTTGGTTTTGGCCTTGTA 59.567 45.455 14.21 0.00 38.73 2.41
53 54 3.453424 CAAGTTGGTTTTGGCCTTGTAC 58.547 45.455 3.32 0.00 0.00 2.90
54 55 2.741145 AGTTGGTTTTGGCCTTGTACA 58.259 42.857 3.32 0.00 0.00 2.90
55 56 3.100671 AGTTGGTTTTGGCCTTGTACAA 58.899 40.909 8.28 8.28 0.00 2.41
56 57 3.709141 AGTTGGTTTTGGCCTTGTACAAT 59.291 39.130 9.13 0.00 0.00 2.71
57 58 3.742433 TGGTTTTGGCCTTGTACAATG 57.258 42.857 9.13 7.68 0.00 2.82
58 59 2.224161 TGGTTTTGGCCTTGTACAATGC 60.224 45.455 23.06 23.06 0.00 3.56
59 60 2.037121 GGTTTTGGCCTTGTACAATGCT 59.963 45.455 27.69 0.00 33.37 3.79
60 61 3.257127 GGTTTTGGCCTTGTACAATGCTA 59.743 43.478 27.69 22.27 33.37 3.49
61 62 4.485163 GTTTTGGCCTTGTACAATGCTAG 58.515 43.478 27.69 9.68 33.37 3.42
62 63 3.433306 TTGGCCTTGTACAATGCTAGT 57.567 42.857 27.69 0.00 33.37 2.57
63 64 3.433306 TGGCCTTGTACAATGCTAGTT 57.567 42.857 27.69 0.00 33.37 2.24
64 65 3.081061 TGGCCTTGTACAATGCTAGTTG 58.919 45.455 27.69 7.79 33.37 3.16
65 66 2.159379 GGCCTTGTACAATGCTAGTTGC 60.159 50.000 27.69 12.04 43.25 4.17
66 67 2.749621 GCCTTGTACAATGCTAGTTGCT 59.250 45.455 23.62 0.00 43.37 3.91
67 68 3.191371 GCCTTGTACAATGCTAGTTGCTT 59.809 43.478 23.62 0.00 43.37 3.91
68 69 4.394920 GCCTTGTACAATGCTAGTTGCTTA 59.605 41.667 23.62 0.00 43.37 3.09
69 70 5.447818 GCCTTGTACAATGCTAGTTGCTTAG 60.448 44.000 23.62 2.12 43.37 2.18
70 71 5.874810 CCTTGTACAATGCTAGTTGCTTAGA 59.125 40.000 9.13 0.00 43.37 2.10
71 72 6.371548 CCTTGTACAATGCTAGTTGCTTAGAA 59.628 38.462 9.13 0.00 43.37 2.10
72 73 7.094805 CCTTGTACAATGCTAGTTGCTTAGAAA 60.095 37.037 9.13 0.00 43.37 2.52
73 74 7.737972 TGTACAATGCTAGTTGCTTAGAAAA 57.262 32.000 0.00 0.00 43.37 2.29
74 75 8.160521 TGTACAATGCTAGTTGCTTAGAAAAA 57.839 30.769 0.00 0.00 43.37 1.94
75 76 8.792633 TGTACAATGCTAGTTGCTTAGAAAAAT 58.207 29.630 0.00 0.00 43.37 1.82
81 82 9.846248 ATGCTAGTTGCTTAGAAAAATAAACTG 57.154 29.630 0.00 0.00 43.37 3.16
82 83 9.062524 TGCTAGTTGCTTAGAAAAATAAACTGA 57.937 29.630 0.00 0.00 43.37 3.41
83 84 9.893305 GCTAGTTGCTTAGAAAAATAAACTGAA 57.107 29.630 0.00 0.00 38.95 3.02
103 104 9.985730 AACTGAAATTTTCTAAAGCATCAATGA 57.014 25.926 10.33 0.00 0.00 2.57
104 105 9.415544 ACTGAAATTTTCTAAAGCATCAATGAC 57.584 29.630 10.33 0.00 0.00 3.06
105 106 9.635520 CTGAAATTTTCTAAAGCATCAATGACT 57.364 29.630 10.33 0.00 0.00 3.41
118 119 9.717942 AAGCATCAATGACTATTTCTATAGGAC 57.282 33.333 0.00 0.00 38.45 3.85
119 120 8.874156 AGCATCAATGACTATTTCTATAGGACA 58.126 33.333 0.00 0.00 38.45 4.02
120 121 9.149225 GCATCAATGACTATTTCTATAGGACAG 57.851 37.037 0.00 0.00 38.45 3.51
123 124 9.421399 TCAATGACTATTTCTATAGGACAGACA 57.579 33.333 0.00 0.00 38.45 3.41
124 125 9.469807 CAATGACTATTTCTATAGGACAGACAC 57.530 37.037 0.00 0.00 38.45 3.67
125 126 7.584122 TGACTATTTCTATAGGACAGACACC 57.416 40.000 0.00 0.00 38.45 4.16
126 127 7.355101 TGACTATTTCTATAGGACAGACACCT 58.645 38.462 0.00 0.00 38.45 4.00
127 128 8.500238 TGACTATTTCTATAGGACAGACACCTA 58.500 37.037 0.00 0.00 42.99 3.08
128 129 9.352191 GACTATTTCTATAGGACAGACACCTAA 57.648 37.037 0.00 0.00 42.26 2.69
129 130 9.884814 ACTATTTCTATAGGACAGACACCTAAT 57.115 33.333 0.00 0.00 42.26 1.73
134 135 8.179509 TCTATAGGACAGACACCTAATTAAGC 57.820 38.462 0.00 0.00 42.26 3.09
135 136 4.124851 AGGACAGACACCTAATTAAGCG 57.875 45.455 0.00 0.00 35.84 4.68
136 137 3.514309 AGGACAGACACCTAATTAAGCGT 59.486 43.478 0.00 0.00 35.84 5.07
137 138 3.864003 GGACAGACACCTAATTAAGCGTC 59.136 47.826 0.00 0.00 0.00 5.19
138 139 4.381718 GGACAGACACCTAATTAAGCGTCT 60.382 45.833 0.00 0.00 37.08 4.18
139 140 5.163581 GGACAGACACCTAATTAAGCGTCTA 60.164 44.000 4.78 0.00 35.69 2.59
140 141 6.461231 GGACAGACACCTAATTAAGCGTCTAT 60.461 42.308 4.78 0.00 35.69 1.98
141 142 6.505272 ACAGACACCTAATTAAGCGTCTATC 58.495 40.000 4.78 0.00 35.69 2.08
142 143 5.921408 CAGACACCTAATTAAGCGTCTATCC 59.079 44.000 4.78 0.00 35.69 2.59
143 144 5.834204 AGACACCTAATTAAGCGTCTATCCT 59.166 40.000 3.43 0.00 35.69 3.24
144 145 5.844004 ACACCTAATTAAGCGTCTATCCTG 58.156 41.667 0.00 0.00 0.00 3.86
145 146 5.363005 ACACCTAATTAAGCGTCTATCCTGT 59.637 40.000 0.00 0.00 0.00 4.00
146 147 6.548622 ACACCTAATTAAGCGTCTATCCTGTA 59.451 38.462 0.00 0.00 0.00 2.74
147 148 6.862090 CACCTAATTAAGCGTCTATCCTGTAC 59.138 42.308 0.00 0.00 0.00 2.90
148 149 6.548622 ACCTAATTAAGCGTCTATCCTGTACA 59.451 38.462 0.00 0.00 0.00 2.90
149 150 7.069085 ACCTAATTAAGCGTCTATCCTGTACAA 59.931 37.037 0.00 0.00 0.00 2.41
150 151 7.924412 CCTAATTAAGCGTCTATCCTGTACAAA 59.076 37.037 0.00 0.00 0.00 2.83
151 152 7.535489 AATTAAGCGTCTATCCTGTACAAAC 57.465 36.000 0.00 0.00 0.00 2.93
152 153 4.530710 AAGCGTCTATCCTGTACAAACA 57.469 40.909 0.00 0.00 0.00 2.83
153 154 4.530710 AGCGTCTATCCTGTACAAACAA 57.469 40.909 0.00 0.00 34.49 2.83
154 155 4.495422 AGCGTCTATCCTGTACAAACAAG 58.505 43.478 0.00 0.00 34.49 3.16
155 156 4.021368 AGCGTCTATCCTGTACAAACAAGT 60.021 41.667 0.00 0.00 34.49 3.16
156 157 5.184479 AGCGTCTATCCTGTACAAACAAGTA 59.816 40.000 0.00 0.00 34.49 2.24
157 158 5.287992 GCGTCTATCCTGTACAAACAAGTAC 59.712 44.000 0.00 0.00 43.58 2.73
158 159 5.803967 CGTCTATCCTGTACAAACAAGTACC 59.196 44.000 0.00 0.00 42.84 3.34
159 160 5.803967 GTCTATCCTGTACAAACAAGTACCG 59.196 44.000 0.00 0.00 42.84 4.02
160 161 3.389925 TCCTGTACAAACAAGTACCGG 57.610 47.619 0.00 0.00 45.35 5.28
161 162 2.699846 TCCTGTACAAACAAGTACCGGT 59.300 45.455 13.98 13.98 44.71 5.28
162 163 2.803956 CCTGTACAAACAAGTACCGGTG 59.196 50.000 19.93 2.00 41.60 4.94
163 164 2.211806 TGTACAAACAAGTACCGGTGC 58.788 47.619 19.93 17.74 42.84 5.01
164 165 2.158928 TGTACAAACAAGTACCGGTGCT 60.159 45.455 20.57 20.57 42.84 4.40
165 166 2.047002 ACAAACAAGTACCGGTGCTT 57.953 45.000 29.62 29.62 35.92 3.91
166 167 3.196939 ACAAACAAGTACCGGTGCTTA 57.803 42.857 33.38 3.79 33.77 3.09
167 168 3.543665 ACAAACAAGTACCGGTGCTTAA 58.456 40.909 33.38 3.34 33.77 1.85
168 169 3.313249 ACAAACAAGTACCGGTGCTTAAC 59.687 43.478 33.38 16.57 33.77 2.01
169 170 2.914695 ACAAGTACCGGTGCTTAACA 57.085 45.000 33.38 1.63 33.77 2.41
170 171 3.196939 ACAAGTACCGGTGCTTAACAA 57.803 42.857 33.38 0.77 33.77 2.83
171 172 3.543665 ACAAGTACCGGTGCTTAACAAA 58.456 40.909 33.38 0.00 33.77 2.83
172 173 4.139038 ACAAGTACCGGTGCTTAACAAAT 58.861 39.130 33.38 11.15 33.77 2.32
173 174 4.023536 ACAAGTACCGGTGCTTAACAAATG 60.024 41.667 33.38 23.30 33.77 2.32
174 175 3.746940 AGTACCGGTGCTTAACAAATGT 58.253 40.909 20.57 0.00 0.00 2.71
175 176 3.749609 AGTACCGGTGCTTAACAAATGTC 59.250 43.478 20.57 0.00 0.00 3.06
176 177 2.858745 ACCGGTGCTTAACAAATGTCT 58.141 42.857 6.12 0.00 0.00 3.41
177 178 2.552315 ACCGGTGCTTAACAAATGTCTG 59.448 45.455 6.12 0.00 0.00 3.51
178 179 2.095263 CCGGTGCTTAACAAATGTCTGG 60.095 50.000 0.00 0.00 0.00 3.86
179 180 2.552315 CGGTGCTTAACAAATGTCTGGT 59.448 45.455 0.00 0.00 0.00 4.00
180 181 3.004315 CGGTGCTTAACAAATGTCTGGTT 59.996 43.478 0.00 0.00 0.00 3.67
181 182 4.499019 CGGTGCTTAACAAATGTCTGGTTT 60.499 41.667 0.00 0.00 0.00 3.27
182 183 5.278071 CGGTGCTTAACAAATGTCTGGTTTA 60.278 40.000 0.00 0.00 0.00 2.01
183 184 6.569610 CGGTGCTTAACAAATGTCTGGTTTAT 60.570 38.462 0.00 0.00 0.00 1.40
184 185 7.151976 GGTGCTTAACAAATGTCTGGTTTATT 58.848 34.615 0.00 0.00 0.00 1.40
185 186 7.655732 GGTGCTTAACAAATGTCTGGTTTATTT 59.344 33.333 0.00 0.00 0.00 1.40
186 187 9.040939 GTGCTTAACAAATGTCTGGTTTATTTT 57.959 29.630 0.00 0.00 0.00 1.82
187 188 9.606631 TGCTTAACAAATGTCTGGTTTATTTTT 57.393 25.926 0.00 0.00 0.00 1.94
206 207 2.801077 TTTAAGCACCTCCCCTAAGC 57.199 50.000 0.00 0.00 0.00 3.09
207 208 1.663911 TTAAGCACCTCCCCTAAGCA 58.336 50.000 0.00 0.00 0.00 3.91
208 209 1.893315 TAAGCACCTCCCCTAAGCAT 58.107 50.000 0.00 0.00 0.00 3.79
209 210 0.548510 AAGCACCTCCCCTAAGCATC 59.451 55.000 0.00 0.00 0.00 3.91
210 211 0.327000 AGCACCTCCCCTAAGCATCT 60.327 55.000 0.00 0.00 0.00 2.90
211 212 0.548510 GCACCTCCCCTAAGCATCTT 59.451 55.000 0.00 0.00 0.00 2.40
212 213 1.748591 GCACCTCCCCTAAGCATCTTG 60.749 57.143 0.00 0.00 0.00 3.02
213 214 1.133976 CACCTCCCCTAAGCATCTTGG 60.134 57.143 0.00 0.00 0.00 3.61
214 215 1.274416 ACCTCCCCTAAGCATCTTGGA 60.274 52.381 0.00 0.00 0.00 3.53
215 216 2.061061 CCTCCCCTAAGCATCTTGGAT 58.939 52.381 0.00 0.00 0.00 3.41
216 217 2.444766 CCTCCCCTAAGCATCTTGGATT 59.555 50.000 0.00 0.00 0.00 3.01
217 218 3.484407 CTCCCCTAAGCATCTTGGATTG 58.516 50.000 0.00 0.00 0.00 2.67
218 219 2.852449 TCCCCTAAGCATCTTGGATTGT 59.148 45.455 0.00 0.00 0.00 2.71
219 220 4.044308 TCCCCTAAGCATCTTGGATTGTA 58.956 43.478 0.00 0.00 0.00 2.41
220 221 4.137543 CCCCTAAGCATCTTGGATTGTAC 58.862 47.826 0.00 0.00 0.00 2.90
221 222 4.385199 CCCCTAAGCATCTTGGATTGTACA 60.385 45.833 0.00 0.00 0.00 2.90
222 223 5.192927 CCCTAAGCATCTTGGATTGTACAA 58.807 41.667 11.41 11.41 0.00 2.41
223 224 5.297776 CCCTAAGCATCTTGGATTGTACAAG 59.702 44.000 14.65 0.00 45.08 3.16
224 225 5.297776 CCTAAGCATCTTGGATTGTACAAGG 59.702 44.000 14.65 0.29 44.13 3.61
225 226 3.019564 AGCATCTTGGATTGTACAAGGC 58.980 45.455 14.65 8.42 44.13 4.35
226 227 2.099756 GCATCTTGGATTGTACAAGGCC 59.900 50.000 14.65 16.98 44.13 5.19
227 228 3.624777 CATCTTGGATTGTACAAGGCCT 58.375 45.455 23.20 0.00 44.13 5.19
228 229 3.806949 TCTTGGATTGTACAAGGCCTT 57.193 42.857 23.20 13.78 44.13 4.35
229 230 4.919774 TCTTGGATTGTACAAGGCCTTA 57.080 40.909 20.00 1.64 44.13 2.69
230 231 5.450818 TCTTGGATTGTACAAGGCCTTAT 57.549 39.130 20.00 10.37 44.13 1.73
231 232 5.192927 TCTTGGATTGTACAAGGCCTTATG 58.807 41.667 20.00 10.74 44.13 1.90
232 233 4.853468 TGGATTGTACAAGGCCTTATGA 57.147 40.909 20.00 3.04 0.00 2.15
233 234 5.186256 TGGATTGTACAAGGCCTTATGAA 57.814 39.130 20.00 9.18 0.00 2.57
234 235 5.192927 TGGATTGTACAAGGCCTTATGAAG 58.807 41.667 20.00 8.06 0.00 3.02
235 236 4.036852 GGATTGTACAAGGCCTTATGAAGC 59.963 45.833 20.00 11.11 0.00 3.86
251 252 2.664398 GCCATTGGCCCTGTTTGG 59.336 61.111 17.28 0.83 44.06 3.28
252 253 1.912763 GCCATTGGCCCTGTTTGGA 60.913 57.895 17.28 0.00 44.06 3.53
253 254 1.266867 GCCATTGGCCCTGTTTGGAT 61.267 55.000 17.28 0.00 44.06 3.41
254 255 1.964344 GCCATTGGCCCTGTTTGGATA 60.964 52.381 17.28 0.00 44.06 2.59
255 256 1.756538 CCATTGGCCCTGTTTGGATAC 59.243 52.381 0.00 0.00 38.35 2.24
256 257 1.756538 CATTGGCCCTGTTTGGATACC 59.243 52.381 0.00 0.00 38.35 2.73
257 258 1.080638 TTGGCCCTGTTTGGATACCT 58.919 50.000 0.00 0.00 38.35 3.08
258 259 1.974028 TGGCCCTGTTTGGATACCTA 58.026 50.000 0.00 0.00 38.35 3.08
259 260 1.843851 TGGCCCTGTTTGGATACCTAG 59.156 52.381 0.00 0.00 38.35 3.02
260 261 1.143073 GGCCCTGTTTGGATACCTAGG 59.857 57.143 7.41 7.41 38.35 3.02
261 262 1.844497 GCCCTGTTTGGATACCTAGGT 59.156 52.381 20.57 20.57 38.35 3.08
262 263 2.241430 GCCCTGTTTGGATACCTAGGTT 59.759 50.000 22.11 8.07 38.35 3.50
263 264 3.457012 GCCCTGTTTGGATACCTAGGTTA 59.543 47.826 22.11 6.64 38.35 2.85
264 265 4.444449 GCCCTGTTTGGATACCTAGGTTAG 60.444 50.000 22.11 6.03 38.35 2.34
265 266 4.966805 CCCTGTTTGGATACCTAGGTTAGA 59.033 45.833 22.11 1.66 38.35 2.10
266 267 5.070580 CCCTGTTTGGATACCTAGGTTAGAG 59.929 48.000 22.11 6.84 38.35 2.43
267 268 5.661759 CCTGTTTGGATACCTAGGTTAGAGT 59.338 44.000 22.11 1.28 38.35 3.24
268 269 6.156429 CCTGTTTGGATACCTAGGTTAGAGTT 59.844 42.308 22.11 0.00 38.35 3.01
269 270 7.343833 CCTGTTTGGATACCTAGGTTAGAGTTA 59.656 40.741 22.11 0.00 38.35 2.24
270 271 8.302515 TGTTTGGATACCTAGGTTAGAGTTAG 57.697 38.462 22.11 0.00 0.00 2.34
271 272 7.897565 TGTTTGGATACCTAGGTTAGAGTTAGT 59.102 37.037 22.11 0.00 0.00 2.24
272 273 8.756927 GTTTGGATACCTAGGTTAGAGTTAGTT 58.243 37.037 22.11 0.00 0.00 2.24
273 274 8.906238 TTGGATACCTAGGTTAGAGTTAGTTT 57.094 34.615 22.11 0.00 0.00 2.66
274 275 8.906238 TGGATACCTAGGTTAGAGTTAGTTTT 57.094 34.615 22.11 0.00 0.00 2.43
275 276 8.755977 TGGATACCTAGGTTAGAGTTAGTTTTG 58.244 37.037 22.11 0.00 0.00 2.44
276 277 8.202811 GGATACCTAGGTTAGAGTTAGTTTTGG 58.797 40.741 22.11 0.00 0.00 3.28
277 278 8.676397 ATACCTAGGTTAGAGTTAGTTTTGGT 57.324 34.615 22.11 0.00 0.00 3.67
278 279 7.384524 ACCTAGGTTAGAGTTAGTTTTGGTT 57.615 36.000 9.21 0.00 0.00 3.67
279 280 8.496534 ACCTAGGTTAGAGTTAGTTTTGGTTA 57.503 34.615 9.21 0.00 0.00 2.85
280 281 8.591940 ACCTAGGTTAGAGTTAGTTTTGGTTAG 58.408 37.037 9.21 0.00 0.00 2.34
281 282 8.591940 CCTAGGTTAGAGTTAGTTTTGGTTAGT 58.408 37.037 0.00 0.00 0.00 2.24
282 283 9.993454 CTAGGTTAGAGTTAGTTTTGGTTAGTT 57.007 33.333 0.00 0.00 0.00 2.24
283 284 8.672823 AGGTTAGAGTTAGTTTTGGTTAGTTG 57.327 34.615 0.00 0.00 0.00 3.16
284 285 8.488668 AGGTTAGAGTTAGTTTTGGTTAGTTGA 58.511 33.333 0.00 0.00 0.00 3.18
285 286 8.771766 GGTTAGAGTTAGTTTTGGTTAGTTGAG 58.228 37.037 0.00 0.00 0.00 3.02
286 287 8.771766 GTTAGAGTTAGTTTTGGTTAGTTGAGG 58.228 37.037 0.00 0.00 0.00 3.86
287 288 5.763698 AGAGTTAGTTTTGGTTAGTTGAGGC 59.236 40.000 0.00 0.00 0.00 4.70
288 289 5.691896 AGTTAGTTTTGGTTAGTTGAGGCT 58.308 37.500 0.00 0.00 0.00 4.58
289 290 5.763698 AGTTAGTTTTGGTTAGTTGAGGCTC 59.236 40.000 7.79 7.79 0.00 4.70
290 291 4.164843 AGTTTTGGTTAGTTGAGGCTCA 57.835 40.909 14.43 14.43 0.00 4.26
291 292 4.532834 AGTTTTGGTTAGTTGAGGCTCAA 58.467 39.130 25.38 25.38 33.32 3.02
292 293 4.953579 AGTTTTGGTTAGTTGAGGCTCAAA 59.046 37.500 30.06 14.31 38.22 2.69
293 294 5.598417 AGTTTTGGTTAGTTGAGGCTCAAAT 59.402 36.000 29.88 29.88 38.22 2.32
294 295 6.775629 AGTTTTGGTTAGTTGAGGCTCAAATA 59.224 34.615 30.06 28.88 38.22 1.40
295 296 7.286775 AGTTTTGGTTAGTTGAGGCTCAAATAA 59.713 33.333 33.83 33.83 42.34 1.40
299 300 3.806949 AGTTGAGGCTCAAATAACCCA 57.193 42.857 30.06 4.20 38.22 4.51
300 301 4.112634 AGTTGAGGCTCAAATAACCCAA 57.887 40.909 30.06 3.41 38.22 4.12
301 302 4.479158 AGTTGAGGCTCAAATAACCCAAA 58.521 39.130 30.06 2.60 38.22 3.28
302 303 4.898861 AGTTGAGGCTCAAATAACCCAAAA 59.101 37.500 30.06 2.04 38.22 2.44
303 304 5.011023 AGTTGAGGCTCAAATAACCCAAAAG 59.989 40.000 30.06 0.00 38.22 2.27
304 305 4.479158 TGAGGCTCAAATAACCCAAAAGT 58.521 39.130 16.28 0.00 0.00 2.66
305 306 5.636123 TGAGGCTCAAATAACCCAAAAGTA 58.364 37.500 16.28 0.00 0.00 2.24
306 307 6.252995 TGAGGCTCAAATAACCCAAAAGTAT 58.747 36.000 16.28 0.00 0.00 2.12
307 308 6.377146 TGAGGCTCAAATAACCCAAAAGTATC 59.623 38.462 16.28 0.00 0.00 2.24
308 309 5.656859 AGGCTCAAATAACCCAAAAGTATCC 59.343 40.000 0.00 0.00 0.00 2.59
309 310 5.420739 GGCTCAAATAACCCAAAAGTATCCA 59.579 40.000 0.00 0.00 0.00 3.41
310 311 6.071051 GGCTCAAATAACCCAAAAGTATCCAA 60.071 38.462 0.00 0.00 0.00 3.53
311 312 7.382898 GCTCAAATAACCCAAAAGTATCCAAA 58.617 34.615 0.00 0.00 0.00 3.28
312 313 7.330946 GCTCAAATAACCCAAAAGTATCCAAAC 59.669 37.037 0.00 0.00 0.00 2.93
313 314 8.251383 TCAAATAACCCAAAAGTATCCAAACA 57.749 30.769 0.00 0.00 0.00 2.83
314 315 8.875168 TCAAATAACCCAAAAGTATCCAAACAT 58.125 29.630 0.00 0.00 0.00 2.71
315 316 8.934825 CAAATAACCCAAAAGTATCCAAACATG 58.065 33.333 0.00 0.00 0.00 3.21
316 317 5.482163 AACCCAAAAGTATCCAAACATGG 57.518 39.130 0.00 0.00 0.00 3.66
317 318 4.488770 ACCCAAAAGTATCCAAACATGGT 58.511 39.130 0.00 0.00 0.00 3.55
318 319 4.283212 ACCCAAAAGTATCCAAACATGGTG 59.717 41.667 0.00 0.00 0.00 4.17
319 320 4.322650 CCCAAAAGTATCCAAACATGGTGG 60.323 45.833 10.68 10.68 37.51 4.61
320 321 4.322650 CCAAAAGTATCCAAACATGGTGGG 60.323 45.833 15.54 7.87 36.73 4.61
321 322 3.825908 AAGTATCCAAACATGGTGGGT 57.174 42.857 3.44 6.37 36.73 4.51
322 323 3.825908 AGTATCCAAACATGGTGGGTT 57.174 42.857 3.44 0.00 36.73 4.11
323 324 4.938575 AGTATCCAAACATGGTGGGTTA 57.061 40.909 3.44 0.00 36.73 2.85
324 325 4.855340 AGTATCCAAACATGGTGGGTTAG 58.145 43.478 3.44 0.00 36.73 2.34
325 326 3.825908 ATCCAAACATGGTGGGTTAGT 57.174 42.857 3.44 0.00 36.73 2.24
326 327 3.603965 TCCAAACATGGTGGGTTAGTT 57.396 42.857 3.44 0.00 36.73 2.24
327 328 3.917300 TCCAAACATGGTGGGTTAGTTT 58.083 40.909 3.44 0.00 36.73 2.66
328 329 3.639094 TCCAAACATGGTGGGTTAGTTTG 59.361 43.478 3.44 0.00 45.10 2.93
329 330 3.988819 CAAACATGGTGGGTTAGTTTGG 58.011 45.455 0.00 0.00 43.04 3.28
330 331 2.302587 ACATGGTGGGTTAGTTTGGG 57.697 50.000 0.00 0.00 0.00 4.12
331 332 1.501604 ACATGGTGGGTTAGTTTGGGT 59.498 47.619 0.00 0.00 0.00 4.51
332 333 2.090999 ACATGGTGGGTTAGTTTGGGTT 60.091 45.455 0.00 0.00 0.00 4.11
333 334 3.140519 ACATGGTGGGTTAGTTTGGGTTA 59.859 43.478 0.00 0.00 0.00 2.85
334 335 3.512219 TGGTGGGTTAGTTTGGGTTAG 57.488 47.619 0.00 0.00 0.00 2.34
335 336 2.784682 TGGTGGGTTAGTTTGGGTTAGT 59.215 45.455 0.00 0.00 0.00 2.24
336 337 3.204831 TGGTGGGTTAGTTTGGGTTAGTT 59.795 43.478 0.00 0.00 0.00 2.24
337 338 3.570975 GGTGGGTTAGTTTGGGTTAGTTG 59.429 47.826 0.00 0.00 0.00 3.16
338 339 3.570975 GTGGGTTAGTTTGGGTTAGTTGG 59.429 47.826 0.00 0.00 0.00 3.77
339 340 3.462579 TGGGTTAGTTTGGGTTAGTTGGA 59.537 43.478 0.00 0.00 0.00 3.53
340 341 4.106663 TGGGTTAGTTTGGGTTAGTTGGAT 59.893 41.667 0.00 0.00 0.00 3.41
341 342 4.703575 GGGTTAGTTTGGGTTAGTTGGATC 59.296 45.833 0.00 0.00 0.00 3.36
342 343 5.516062 GGGTTAGTTTGGGTTAGTTGGATCT 60.516 44.000 0.00 0.00 0.00 2.75
343 344 6.296605 GGGTTAGTTTGGGTTAGTTGGATCTA 60.297 42.308 0.00 0.00 0.00 1.98
344 345 7.170277 GGTTAGTTTGGGTTAGTTGGATCTAA 58.830 38.462 0.00 0.00 0.00 2.10
345 346 7.120285 GGTTAGTTTGGGTTAGTTGGATCTAAC 59.880 40.741 13.69 13.69 45.03 2.34
351 352 3.882444 GTTAGTTGGATCTAACCCACCC 58.118 50.000 17.41 0.00 41.99 4.61
352 353 1.296002 AGTTGGATCTAACCCACCCC 58.704 55.000 17.41 0.00 32.58 4.95
353 354 0.996583 GTTGGATCTAACCCACCCCA 59.003 55.000 10.68 0.00 32.58 4.96
354 355 1.356398 GTTGGATCTAACCCACCCCAA 59.644 52.381 10.68 0.00 32.58 4.12
355 356 1.761711 TGGATCTAACCCACCCCAAA 58.238 50.000 0.00 0.00 0.00 3.28
356 357 2.074579 TGGATCTAACCCACCCCAAAA 58.925 47.619 0.00 0.00 0.00 2.44
357 358 2.451273 TGGATCTAACCCACCCCAAAAA 59.549 45.455 0.00 0.00 0.00 1.94
375 376 3.983044 AAAACTAGCCCACACTAGAGG 57.017 47.619 0.00 0.00 41.92 3.69
376 377 2.921834 AACTAGCCCACACTAGAGGA 57.078 50.000 0.00 0.00 41.92 3.71
377 378 2.445682 ACTAGCCCACACTAGAGGAG 57.554 55.000 0.00 0.00 41.92 3.69
378 379 1.036707 CTAGCCCACACTAGAGGAGC 58.963 60.000 0.00 1.93 41.92 4.70
379 380 0.631753 TAGCCCACACTAGAGGAGCT 59.368 55.000 0.00 8.80 36.53 4.09
380 381 0.252467 AGCCCACACTAGAGGAGCTT 60.252 55.000 0.00 0.00 31.60 3.74
381 382 1.007238 AGCCCACACTAGAGGAGCTTA 59.993 52.381 0.00 0.00 31.60 3.09
382 383 2.043227 GCCCACACTAGAGGAGCTTAT 58.957 52.381 0.00 0.00 0.00 1.73
383 384 2.436173 GCCCACACTAGAGGAGCTTATT 59.564 50.000 0.00 0.00 0.00 1.40
384 385 3.118223 GCCCACACTAGAGGAGCTTATTT 60.118 47.826 0.00 0.00 0.00 1.40
385 386 4.446371 CCCACACTAGAGGAGCTTATTTG 58.554 47.826 0.00 0.00 0.00 2.32
386 387 4.446371 CCACACTAGAGGAGCTTATTTGG 58.554 47.826 0.00 0.00 0.00 3.28
387 388 4.446371 CACACTAGAGGAGCTTATTTGGG 58.554 47.826 0.00 0.00 0.00 4.12
388 389 4.080863 CACACTAGAGGAGCTTATTTGGGT 60.081 45.833 0.00 0.00 0.00 4.51
389 390 4.536489 ACACTAGAGGAGCTTATTTGGGTT 59.464 41.667 0.00 0.00 0.00 4.11
390 391 5.724854 ACACTAGAGGAGCTTATTTGGGTTA 59.275 40.000 0.00 0.00 0.00 2.85
391 392 6.127026 ACACTAGAGGAGCTTATTTGGGTTAG 60.127 42.308 0.00 0.00 0.00 2.34
392 393 5.965091 ACTAGAGGAGCTTATTTGGGTTAGT 59.035 40.000 0.00 0.00 0.00 2.24
393 394 5.780958 AGAGGAGCTTATTTGGGTTAGTT 57.219 39.130 0.00 0.00 0.00 2.24
394 395 5.746284 AGAGGAGCTTATTTGGGTTAGTTC 58.254 41.667 0.00 0.00 0.00 3.01
395 396 5.489278 AGAGGAGCTTATTTGGGTTAGTTCT 59.511 40.000 0.00 0.00 0.00 3.01
396 397 5.746284 AGGAGCTTATTTGGGTTAGTTCTC 58.254 41.667 0.00 0.00 0.00 2.87
397 398 5.489278 AGGAGCTTATTTGGGTTAGTTCTCT 59.511 40.000 0.00 0.00 0.00 3.10
398 399 6.012421 AGGAGCTTATTTGGGTTAGTTCTCTT 60.012 38.462 0.00 0.00 0.00 2.85
399 400 6.094186 GGAGCTTATTTGGGTTAGTTCTCTTG 59.906 42.308 0.00 0.00 0.00 3.02
400 401 5.946377 AGCTTATTTGGGTTAGTTCTCTTGG 59.054 40.000 0.00 0.00 0.00 3.61
401 402 5.125578 GCTTATTTGGGTTAGTTCTCTTGGG 59.874 44.000 0.00 0.00 0.00 4.12
402 403 2.579410 TTGGGTTAGTTCTCTTGGGC 57.421 50.000 0.00 0.00 0.00 5.36
403 404 0.696501 TGGGTTAGTTCTCTTGGGCC 59.303 55.000 0.00 0.00 0.00 5.80
404 405 0.034380 GGGTTAGTTCTCTTGGGCCC 60.034 60.000 17.59 17.59 0.00 5.80
405 406 0.696501 GGTTAGTTCTCTTGGGCCCA 59.303 55.000 24.45 24.45 0.00 5.36
406 407 1.613520 GGTTAGTTCTCTTGGGCCCAC 60.614 57.143 28.70 12.61 0.00 4.61
407 408 1.351350 GTTAGTTCTCTTGGGCCCACT 59.649 52.381 28.70 20.08 0.00 4.00
408 409 2.570302 GTTAGTTCTCTTGGGCCCACTA 59.430 50.000 28.70 18.89 0.00 2.74
409 410 1.742308 AGTTCTCTTGGGCCCACTAA 58.258 50.000 28.70 13.72 0.00 2.24
410 411 2.062636 AGTTCTCTTGGGCCCACTAAA 58.937 47.619 28.70 14.10 0.00 1.85
411 412 2.445525 AGTTCTCTTGGGCCCACTAAAA 59.554 45.455 28.70 14.51 0.00 1.52
412 413 3.117284 AGTTCTCTTGGGCCCACTAAAAA 60.117 43.478 28.70 12.92 0.00 1.94
441 442 3.468071 AAAAAGTTACCCCTCCCATCC 57.532 47.619 0.00 0.00 0.00 3.51
442 443 2.068831 AAAGTTACCCCTCCCATCCA 57.931 50.000 0.00 0.00 0.00 3.41
443 444 2.068831 AAGTTACCCCTCCCATCCAA 57.931 50.000 0.00 0.00 0.00 3.53
444 445 2.068831 AGTTACCCCTCCCATCCAAA 57.931 50.000 0.00 0.00 0.00 3.28
445 446 1.639108 AGTTACCCCTCCCATCCAAAC 59.361 52.381 0.00 0.00 0.00 2.93
446 447 1.356398 GTTACCCCTCCCATCCAAACA 59.644 52.381 0.00 0.00 0.00 2.83
447 448 1.994399 TACCCCTCCCATCCAAACAT 58.006 50.000 0.00 0.00 0.00 2.71
448 449 0.336048 ACCCCTCCCATCCAAACATG 59.664 55.000 0.00 0.00 0.00 3.21
449 450 0.397535 CCCCTCCCATCCAAACATGG 60.398 60.000 0.00 0.00 42.91 3.66
450 451 0.336048 CCCTCCCATCCAAACATGGT 59.664 55.000 0.00 0.00 41.84 3.55
451 452 1.686115 CCCTCCCATCCAAACATGGTC 60.686 57.143 0.00 0.00 41.84 4.02
452 453 1.285962 CCTCCCATCCAAACATGGTCT 59.714 52.381 0.00 0.00 41.84 3.85
453 454 2.509548 CCTCCCATCCAAACATGGTCTA 59.490 50.000 0.00 0.00 41.84 2.59
454 455 3.053693 CCTCCCATCCAAACATGGTCTAA 60.054 47.826 0.00 0.00 41.84 2.10
455 456 4.569653 CCTCCCATCCAAACATGGTCTAAA 60.570 45.833 0.00 0.00 41.84 1.85
456 457 4.599041 TCCCATCCAAACATGGTCTAAAG 58.401 43.478 0.00 0.00 41.84 1.85
457 458 4.044065 TCCCATCCAAACATGGTCTAAAGT 59.956 41.667 0.00 0.00 41.84 2.66
458 459 5.251932 TCCCATCCAAACATGGTCTAAAGTA 59.748 40.000 0.00 0.00 41.84 2.24
459 460 5.590259 CCCATCCAAACATGGTCTAAAGTAG 59.410 44.000 0.00 0.00 41.84 2.57
460 461 6.180472 CCATCCAAACATGGTCTAAAGTAGT 58.820 40.000 0.00 0.00 38.92 2.73
461 462 6.316390 CCATCCAAACATGGTCTAAAGTAGTC 59.684 42.308 0.00 0.00 38.92 2.59
462 463 6.428083 TCCAAACATGGTCTAAAGTAGTCA 57.572 37.500 0.00 0.00 0.00 3.41
463 464 6.833041 TCCAAACATGGTCTAAAGTAGTCAA 58.167 36.000 0.00 0.00 0.00 3.18
464 465 7.284074 TCCAAACATGGTCTAAAGTAGTCAAA 58.716 34.615 0.00 0.00 0.00 2.69
465 466 7.942341 TCCAAACATGGTCTAAAGTAGTCAAAT 59.058 33.333 0.00 0.00 0.00 2.32
466 467 8.023128 CCAAACATGGTCTAAAGTAGTCAAATG 58.977 37.037 0.00 0.00 0.00 2.32
467 468 8.783093 CAAACATGGTCTAAAGTAGTCAAATGA 58.217 33.333 0.00 0.00 0.00 2.57
468 469 9.520515 AAACATGGTCTAAAGTAGTCAAATGAT 57.479 29.630 0.00 0.00 0.00 2.45
469 470 9.520515 AACATGGTCTAAAGTAGTCAAATGATT 57.479 29.630 0.00 0.00 0.00 2.57
470 471 8.950210 ACATGGTCTAAAGTAGTCAAATGATTG 58.050 33.333 0.00 0.00 37.92 2.67
471 472 7.921786 TGGTCTAAAGTAGTCAAATGATTGG 57.078 36.000 0.00 0.00 37.15 3.16
472 473 7.685481 TGGTCTAAAGTAGTCAAATGATTGGA 58.315 34.615 0.00 0.00 37.15 3.53
473 474 8.160765 TGGTCTAAAGTAGTCAAATGATTGGAA 58.839 33.333 0.00 0.00 37.15 3.53
474 475 9.010029 GGTCTAAAGTAGTCAAATGATTGGAAA 57.990 33.333 0.00 0.00 37.15 3.13
511 512 9.793259 TTATCAATCTAACCCTATCATCCAAAC 57.207 33.333 0.00 0.00 0.00 2.93
512 513 7.206789 TCAATCTAACCCTATCATCCAAACA 57.793 36.000 0.00 0.00 0.00 2.83
513 514 7.282585 TCAATCTAACCCTATCATCCAAACAG 58.717 38.462 0.00 0.00 0.00 3.16
514 515 5.036117 TCTAACCCTATCATCCAAACAGC 57.964 43.478 0.00 0.00 0.00 4.40
515 516 4.721776 TCTAACCCTATCATCCAAACAGCT 59.278 41.667 0.00 0.00 0.00 4.24
516 517 3.567478 ACCCTATCATCCAAACAGCTC 57.433 47.619 0.00 0.00 0.00 4.09
517 518 3.118531 ACCCTATCATCCAAACAGCTCT 58.881 45.455 0.00 0.00 0.00 4.09
518 519 3.525199 ACCCTATCATCCAAACAGCTCTT 59.475 43.478 0.00 0.00 0.00 2.85
519 520 4.018050 ACCCTATCATCCAAACAGCTCTTT 60.018 41.667 0.00 0.00 0.00 2.52
520 521 4.337555 CCCTATCATCCAAACAGCTCTTTG 59.662 45.833 7.43 7.43 0.00 2.77
527 528 4.756084 CCAAACAGCTCTTTGGTTAGAG 57.244 45.455 21.68 0.00 43.67 2.43
528 529 4.137543 CCAAACAGCTCTTTGGTTAGAGT 58.862 43.478 21.68 0.00 43.67 3.24
529 530 4.580580 CCAAACAGCTCTTTGGTTAGAGTT 59.419 41.667 21.68 0.00 43.67 3.01
530 531 5.763204 CCAAACAGCTCTTTGGTTAGAGTTA 59.237 40.000 21.68 0.00 43.67 2.24
531 532 6.073003 CCAAACAGCTCTTTGGTTAGAGTTAG 60.073 42.308 21.68 0.00 43.67 2.34
532 533 5.810080 ACAGCTCTTTGGTTAGAGTTAGT 57.190 39.130 0.00 0.00 42.93 2.24
533 534 6.176014 ACAGCTCTTTGGTTAGAGTTAGTT 57.824 37.500 0.00 0.00 42.93 2.24
534 535 6.592870 ACAGCTCTTTGGTTAGAGTTAGTTT 58.407 36.000 0.00 0.00 42.93 2.66
535 536 7.732996 ACAGCTCTTTGGTTAGAGTTAGTTTA 58.267 34.615 0.00 0.00 42.93 2.01
536 537 7.873505 ACAGCTCTTTGGTTAGAGTTAGTTTAG 59.126 37.037 0.00 0.00 42.93 1.85
537 538 7.332182 CAGCTCTTTGGTTAGAGTTAGTTTAGG 59.668 40.741 0.00 0.00 42.93 2.69
538 539 6.594547 GCTCTTTGGTTAGAGTTAGTTTAGGG 59.405 42.308 0.00 0.00 42.93 3.53
539 540 7.622502 TCTTTGGTTAGAGTTAGTTTAGGGT 57.377 36.000 0.00 0.00 0.00 4.34
540 541 8.037723 TCTTTGGTTAGAGTTAGTTTAGGGTT 57.962 34.615 0.00 0.00 0.00 4.11
541 542 7.935210 TCTTTGGTTAGAGTTAGTTTAGGGTTG 59.065 37.037 0.00 0.00 0.00 3.77
542 543 6.117975 TGGTTAGAGTTAGTTTAGGGTTGG 57.882 41.667 0.00 0.00 0.00 3.77
543 544 5.608015 TGGTTAGAGTTAGTTTAGGGTTGGT 59.392 40.000 0.00 0.00 0.00 3.67
544 545 6.101588 TGGTTAGAGTTAGTTTAGGGTTGGTT 59.898 38.462 0.00 0.00 0.00 3.67
545 546 6.652481 GGTTAGAGTTAGTTTAGGGTTGGTTC 59.348 42.308 0.00 0.00 0.00 3.62
546 547 5.899631 AGAGTTAGTTTAGGGTTGGTTCA 57.100 39.130 0.00 0.00 0.00 3.18
547 548 6.256643 AGAGTTAGTTTAGGGTTGGTTCAA 57.743 37.500 0.00 0.00 0.00 2.69
548 549 6.296803 AGAGTTAGTTTAGGGTTGGTTCAAG 58.703 40.000 0.00 0.00 0.00 3.02
549 550 5.382616 AGTTAGTTTAGGGTTGGTTCAAGG 58.617 41.667 0.00 0.00 0.00 3.61
550 551 3.965470 AGTTTAGGGTTGGTTCAAGGT 57.035 42.857 0.00 0.00 0.00 3.50
551 552 4.259933 AGTTTAGGGTTGGTTCAAGGTT 57.740 40.909 0.00 0.00 0.00 3.50
552 553 5.391577 AGTTTAGGGTTGGTTCAAGGTTA 57.608 39.130 0.00 0.00 0.00 2.85
553 554 5.382616 AGTTTAGGGTTGGTTCAAGGTTAG 58.617 41.667 0.00 0.00 0.00 2.34
554 555 5.133153 AGTTTAGGGTTGGTTCAAGGTTAGA 59.867 40.000 0.00 0.00 0.00 2.10
555 556 5.649970 TTAGGGTTGGTTCAAGGTTAGAA 57.350 39.130 0.00 0.00 0.00 2.10
556 557 4.741928 AGGGTTGGTTCAAGGTTAGAAT 57.258 40.909 0.00 0.00 0.00 2.40
557 558 4.663334 AGGGTTGGTTCAAGGTTAGAATC 58.337 43.478 0.00 0.00 0.00 2.52
558 559 4.354087 AGGGTTGGTTCAAGGTTAGAATCT 59.646 41.667 0.00 0.00 0.00 2.40
559 560 5.550403 AGGGTTGGTTCAAGGTTAGAATCTA 59.450 40.000 0.00 0.00 0.00 1.98
560 561 6.045106 AGGGTTGGTTCAAGGTTAGAATCTAA 59.955 38.462 0.00 0.00 0.00 2.10
561 562 6.150641 GGGTTGGTTCAAGGTTAGAATCTAAC 59.849 42.308 21.48 21.48 0.00 2.34
562 563 6.940867 GGTTGGTTCAAGGTTAGAATCTAACT 59.059 38.462 26.42 13.74 0.00 2.24
563 564 7.119407 GGTTGGTTCAAGGTTAGAATCTAACTC 59.881 40.741 26.42 18.44 0.00 3.01
564 565 7.554959 TGGTTCAAGGTTAGAATCTAACTCT 57.445 36.000 26.42 19.95 0.00 3.24
565 566 8.660295 TGGTTCAAGGTTAGAATCTAACTCTA 57.340 34.615 26.42 11.64 0.00 2.43
566 567 9.096823 TGGTTCAAGGTTAGAATCTAACTCTAA 57.903 33.333 26.42 15.64 33.89 2.10
594 595 8.645814 TCTAACTGAGTTAGAGTATCCAAACA 57.354 34.615 26.45 4.73 46.18 2.83
595 596 8.740906 TCTAACTGAGTTAGAGTATCCAAACAG 58.259 37.037 26.45 3.66 46.18 3.16
596 597 6.287589 ACTGAGTTAGAGTATCCAAACAGG 57.712 41.667 0.00 0.00 34.84 4.00
612 613 1.180029 CAGGGCCATTGACTTTCCTG 58.820 55.000 6.18 0.00 36.28 3.86
618 619 2.440409 CCATTGACTTTCCTGTGGGAG 58.560 52.381 0.00 0.00 43.29 4.30
626 627 1.871418 TTCCTGTGGGAGAGATCCTG 58.129 55.000 0.00 0.00 43.29 3.86
634 635 4.168088 TGTGGGAGAGATCCTGTCTATACA 59.832 45.833 0.00 0.00 37.29 2.29
638 639 5.381757 GGAGAGATCCTGTCTATACACTGT 58.618 45.833 0.00 0.00 37.29 3.55
640 641 5.761205 AGAGATCCTGTCTATACACTGTGT 58.239 41.667 18.51 18.51 37.29 3.72
652 653 1.162698 CACTGTGTTGGGATGCTGAG 58.837 55.000 0.00 0.00 0.00 3.35
662 663 7.178274 TGTGTTGGGATGCTGAGTTAATAAAAT 59.822 33.333 0.00 0.00 0.00 1.82
664 665 8.902806 TGTTGGGATGCTGAGTTAATAAAATAG 58.097 33.333 0.00 0.00 0.00 1.73
733 736 6.021885 GTGAAACACATGATCCAACTTTGGG 61.022 44.000 8.17 0.00 42.58 4.12
745 748 3.196685 CCAACTTTGGGACCAAGAACAAA 59.803 43.478 3.73 0.00 44.70 2.83
761 764 5.253330 AGAACAAATTCACGTCCATACCAT 58.747 37.500 0.00 0.00 37.29 3.55
782 788 5.423717 CATTAATACGTGTCAGTTGATCGC 58.576 41.667 0.00 0.00 0.00 4.58
851 857 2.430921 GACTCACGAGCACCACCG 60.431 66.667 0.00 0.00 0.00 4.94
915 924 5.694995 TCCAAAAGAGATCCAGAAAACACT 58.305 37.500 0.00 0.00 0.00 3.55
1026 1042 1.223211 GCTGGCTTTCCTCCTCCTC 59.777 63.158 0.00 0.00 0.00 3.71
1554 1570 2.683867 CGTCACTATCTCCCTCGAGTTT 59.316 50.000 12.31 0.00 37.40 2.66
1604 1620 0.998945 AATTCCCCATCCCCCGATGT 60.999 55.000 0.00 0.00 43.87 3.06
1605 1621 1.427072 ATTCCCCATCCCCCGATGTC 61.427 60.000 0.00 0.00 43.87 3.06
1665 1681 3.766691 TCGTACTTCCAGCCGGCC 61.767 66.667 26.15 5.07 0.00 6.13
1680 1696 4.899239 GCCGACCTGATCCTGCCG 62.899 72.222 0.00 0.00 0.00 5.69
1959 1975 2.359478 GTGCCGTTCCCCGTCATT 60.359 61.111 0.00 0.00 33.66 2.57
1974 1990 2.365582 GTCATTTACACGGGAGGCATT 58.634 47.619 0.00 0.00 0.00 3.56
2307 2323 1.006102 CTGGGTCAAGTCGTCGCTT 60.006 57.895 0.00 0.00 0.00 4.68
2316 2332 1.204312 GTCGTCGCTTGGCAACTTC 59.796 57.895 0.00 0.00 37.61 3.01
2328 2344 0.878961 GCAACTTCACGACCGAGGTT 60.879 55.000 0.00 0.00 35.77 3.50
2389 2405 1.070786 GACGGCAGGAACAAGACCA 59.929 57.895 0.00 0.00 0.00 4.02
2427 2443 2.584391 GGAGACGGAGGTGCTGGTT 61.584 63.158 0.00 0.00 0.00 3.67
2502 2518 2.230508 TCTGTCGTTCTACATGGACACC 59.769 50.000 0.00 0.00 35.69 4.16
2922 2941 2.710096 TTTGGAATCCCAGATCCGTC 57.290 50.000 0.00 0.00 44.60 4.79
3177 3204 7.148086 GCATAACCCTTTTGTGATACATCTTGA 60.148 37.037 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.482973 AGAAGCTTTGCTGAAGATATAAGAGC 59.517 38.462 0.00 0.00 39.62 4.09
1 2 7.096106 CGAGAAGCTTTGCTGAAGATATAAGAG 60.096 40.741 0.00 0.00 39.62 2.85
3 4 6.699204 TCGAGAAGCTTTGCTGAAGATATAAG 59.301 38.462 0.00 0.00 39.62 1.73
4 5 6.573434 TCGAGAAGCTTTGCTGAAGATATAA 58.427 36.000 0.00 0.00 39.62 0.98
5 6 6.149129 TCGAGAAGCTTTGCTGAAGATATA 57.851 37.500 0.00 0.00 39.62 0.86
6 7 5.016051 TCGAGAAGCTTTGCTGAAGATAT 57.984 39.130 0.00 0.00 39.62 1.63
7 8 4.456280 TCGAGAAGCTTTGCTGAAGATA 57.544 40.909 0.00 0.00 39.62 1.98
8 9 3.325293 TCGAGAAGCTTTGCTGAAGAT 57.675 42.857 0.00 0.00 39.62 2.40
9 10 2.820059 TCGAGAAGCTTTGCTGAAGA 57.180 45.000 0.00 0.00 39.62 2.87
10 11 2.475852 GCATCGAGAAGCTTTGCTGAAG 60.476 50.000 11.88 2.33 39.62 3.02
11 12 1.466167 GCATCGAGAAGCTTTGCTGAA 59.534 47.619 11.88 0.00 39.62 3.02
12 13 1.081892 GCATCGAGAAGCTTTGCTGA 58.918 50.000 11.88 3.91 39.62 4.26
13 14 0.098376 GGCATCGAGAAGCTTTGCTG 59.902 55.000 17.17 6.83 39.62 4.41
14 15 0.321919 TGGCATCGAGAAGCTTTGCT 60.322 50.000 17.17 3.83 42.56 3.91
15 16 0.523072 TTGGCATCGAGAAGCTTTGC 59.477 50.000 10.91 10.91 0.00 3.68
16 17 1.808945 ACTTGGCATCGAGAAGCTTTG 59.191 47.619 0.00 0.00 0.00 2.77
17 18 2.191128 ACTTGGCATCGAGAAGCTTT 57.809 45.000 0.00 0.00 0.00 3.51
18 19 1.808945 CAACTTGGCATCGAGAAGCTT 59.191 47.619 0.00 0.00 0.00 3.74
19 20 1.446907 CAACTTGGCATCGAGAAGCT 58.553 50.000 7.15 0.00 0.00 3.74
20 21 0.449388 CCAACTTGGCATCGAGAAGC 59.551 55.000 0.00 0.00 0.00 3.86
21 22 1.813513 ACCAACTTGGCATCGAGAAG 58.186 50.000 7.81 0.00 42.67 2.85
22 23 2.270352 AACCAACTTGGCATCGAGAA 57.730 45.000 7.81 0.00 42.67 2.87
23 24 2.270352 AAACCAACTTGGCATCGAGA 57.730 45.000 7.81 0.00 42.67 4.04
24 25 2.607771 CCAAAACCAACTTGGCATCGAG 60.608 50.000 7.81 0.00 42.67 4.04
25 26 1.339610 CCAAAACCAACTTGGCATCGA 59.660 47.619 7.81 0.00 42.67 3.59
26 27 1.782044 CCAAAACCAACTTGGCATCG 58.218 50.000 7.81 0.00 42.67 3.84
31 32 1.209261 ACAAGGCCAAAACCAACTTGG 59.791 47.619 5.01 6.24 45.26 3.61
32 33 2.689553 ACAAGGCCAAAACCAACTTG 57.310 45.000 5.01 0.00 43.01 3.16
33 34 3.100671 TGTACAAGGCCAAAACCAACTT 58.899 40.909 5.01 0.00 0.00 2.66
34 35 2.741145 TGTACAAGGCCAAAACCAACT 58.259 42.857 5.01 0.00 0.00 3.16
35 36 3.528597 TTGTACAAGGCCAAAACCAAC 57.471 42.857 5.01 0.00 0.00 3.77
36 37 3.742640 GCATTGTACAAGGCCAAAACCAA 60.743 43.478 29.85 2.21 41.71 3.67
37 38 2.224161 GCATTGTACAAGGCCAAAACCA 60.224 45.455 29.85 0.00 41.71 3.67
38 39 2.412870 GCATTGTACAAGGCCAAAACC 58.587 47.619 29.85 5.14 41.71 3.27
57 58 9.893305 TTCAGTTTATTTTTCTAAGCAACTAGC 57.107 29.630 0.00 0.00 46.19 3.42
77 78 9.985730 TCATTGATGCTTTAGAAAATTTCAGTT 57.014 25.926 8.55 0.00 0.00 3.16
78 79 9.415544 GTCATTGATGCTTTAGAAAATTTCAGT 57.584 29.630 8.55 0.00 0.00 3.41
79 80 9.635520 AGTCATTGATGCTTTAGAAAATTTCAG 57.364 29.630 8.55 0.00 0.00 3.02
92 93 9.717942 GTCCTATAGAAATAGTCATTGATGCTT 57.282 33.333 0.00 0.00 34.36 3.91
93 94 8.874156 TGTCCTATAGAAATAGTCATTGATGCT 58.126 33.333 0.00 0.00 34.36 3.79
94 95 9.149225 CTGTCCTATAGAAATAGTCATTGATGC 57.851 37.037 0.00 0.00 34.36 3.91
97 98 9.421399 TGTCTGTCCTATAGAAATAGTCATTGA 57.579 33.333 0.00 0.00 34.36 2.57
98 99 9.469807 GTGTCTGTCCTATAGAAATAGTCATTG 57.530 37.037 0.00 0.00 34.36 2.82
99 100 8.643324 GGTGTCTGTCCTATAGAAATAGTCATT 58.357 37.037 0.00 0.00 34.36 2.57
100 101 8.007742 AGGTGTCTGTCCTATAGAAATAGTCAT 58.992 37.037 0.00 0.00 34.36 3.06
101 102 7.355101 AGGTGTCTGTCCTATAGAAATAGTCA 58.645 38.462 0.00 0.00 34.36 3.41
102 103 7.826918 AGGTGTCTGTCCTATAGAAATAGTC 57.173 40.000 0.00 0.00 34.36 2.59
103 104 9.884814 ATTAGGTGTCTGTCCTATAGAAATAGT 57.115 33.333 0.00 0.00 37.39 2.12
108 109 8.639761 GCTTAATTAGGTGTCTGTCCTATAGAA 58.360 37.037 0.00 0.00 37.39 2.10
109 110 7.040617 CGCTTAATTAGGTGTCTGTCCTATAGA 60.041 40.741 0.00 0.00 37.39 1.98
110 111 7.085116 CGCTTAATTAGGTGTCTGTCCTATAG 58.915 42.308 0.19 0.00 37.39 1.31
111 112 6.548622 ACGCTTAATTAGGTGTCTGTCCTATA 59.451 38.462 7.89 0.00 37.39 1.31
112 113 5.363005 ACGCTTAATTAGGTGTCTGTCCTAT 59.637 40.000 7.89 0.00 37.39 2.57
113 114 4.708421 ACGCTTAATTAGGTGTCTGTCCTA 59.292 41.667 7.89 0.00 36.60 2.94
114 115 3.514309 ACGCTTAATTAGGTGTCTGTCCT 59.486 43.478 7.89 0.00 38.91 3.85
115 116 3.858247 ACGCTTAATTAGGTGTCTGTCC 58.142 45.455 7.89 0.00 0.00 4.02
116 117 4.745649 AGACGCTTAATTAGGTGTCTGTC 58.254 43.478 31.43 13.78 46.80 3.51
117 118 4.803098 AGACGCTTAATTAGGTGTCTGT 57.197 40.909 31.43 16.45 46.80 3.41
120 121 5.921408 CAGGATAGACGCTTAATTAGGTGTC 59.079 44.000 25.65 25.65 41.40 3.67
121 122 5.363005 ACAGGATAGACGCTTAATTAGGTGT 59.637 40.000 13.03 13.03 0.00 4.16
122 123 5.844004 ACAGGATAGACGCTTAATTAGGTG 58.156 41.667 6.60 6.60 0.00 4.00
123 124 6.548622 TGTACAGGATAGACGCTTAATTAGGT 59.451 38.462 0.00 0.00 0.00 3.08
124 125 6.978338 TGTACAGGATAGACGCTTAATTAGG 58.022 40.000 0.00 0.00 0.00 2.69
125 126 8.753175 GTTTGTACAGGATAGACGCTTAATTAG 58.247 37.037 0.00 0.00 0.00 1.73
126 127 8.252417 TGTTTGTACAGGATAGACGCTTAATTA 58.748 33.333 0.00 0.00 0.00 1.40
127 128 7.101054 TGTTTGTACAGGATAGACGCTTAATT 58.899 34.615 0.00 0.00 0.00 1.40
128 129 6.636705 TGTTTGTACAGGATAGACGCTTAAT 58.363 36.000 0.00 0.00 0.00 1.40
129 130 6.028146 TGTTTGTACAGGATAGACGCTTAA 57.972 37.500 0.00 0.00 0.00 1.85
130 131 5.648178 TGTTTGTACAGGATAGACGCTTA 57.352 39.130 0.00 0.00 0.00 3.09
131 132 4.530710 TGTTTGTACAGGATAGACGCTT 57.469 40.909 0.00 0.00 0.00 4.68
132 133 4.021368 ACTTGTTTGTACAGGATAGACGCT 60.021 41.667 0.00 0.00 35.12 5.07
133 134 4.243270 ACTTGTTTGTACAGGATAGACGC 58.757 43.478 0.00 0.00 35.12 5.19
134 135 5.803967 GGTACTTGTTTGTACAGGATAGACG 59.196 44.000 0.00 0.00 43.17 4.18
135 136 5.803967 CGGTACTTGTTTGTACAGGATAGAC 59.196 44.000 0.00 0.00 43.17 2.59
136 137 5.957798 CGGTACTTGTTTGTACAGGATAGA 58.042 41.667 0.00 0.00 43.17 1.98
142 143 2.222445 GCACCGGTACTTGTTTGTACAG 59.778 50.000 6.87 0.00 43.17 2.74
143 144 2.158928 AGCACCGGTACTTGTTTGTACA 60.159 45.455 6.87 0.00 43.17 2.90
144 145 2.486918 AGCACCGGTACTTGTTTGTAC 58.513 47.619 6.87 0.00 41.31 2.90
145 146 2.914695 AGCACCGGTACTTGTTTGTA 57.085 45.000 6.87 0.00 0.00 2.41
146 147 2.047002 AAGCACCGGTACTTGTTTGT 57.953 45.000 19.47 0.00 0.00 2.83
147 148 3.312973 TGTTAAGCACCGGTACTTGTTTG 59.687 43.478 27.16 5.19 0.00 2.93
148 149 3.543665 TGTTAAGCACCGGTACTTGTTT 58.456 40.909 27.16 12.89 0.00 2.83
149 150 3.196939 TGTTAAGCACCGGTACTTGTT 57.803 42.857 27.16 6.53 0.00 2.83
150 151 2.914695 TGTTAAGCACCGGTACTTGT 57.085 45.000 27.16 7.27 0.00 3.16
151 152 4.023536 ACATTTGTTAAGCACCGGTACTTG 60.024 41.667 27.16 13.54 0.00 3.16
152 153 4.139038 ACATTTGTTAAGCACCGGTACTT 58.861 39.130 23.25 23.25 0.00 2.24
153 154 3.746940 ACATTTGTTAAGCACCGGTACT 58.253 40.909 6.87 3.13 0.00 2.73
154 155 3.749609 AGACATTTGTTAAGCACCGGTAC 59.250 43.478 6.87 0.00 0.00 3.34
155 156 3.749088 CAGACATTTGTTAAGCACCGGTA 59.251 43.478 6.87 0.00 0.00 4.02
156 157 2.552315 CAGACATTTGTTAAGCACCGGT 59.448 45.455 0.00 0.00 0.00 5.28
157 158 2.095263 CCAGACATTTGTTAAGCACCGG 60.095 50.000 0.00 0.00 0.00 5.28
158 159 2.552315 ACCAGACATTTGTTAAGCACCG 59.448 45.455 0.00 0.00 0.00 4.94
159 160 4.584327 AACCAGACATTTGTTAAGCACC 57.416 40.909 0.00 0.00 0.00 5.01
160 161 8.587952 AAATAAACCAGACATTTGTTAAGCAC 57.412 30.769 0.00 0.00 0.00 4.40
161 162 9.606631 AAAAATAAACCAGACATTTGTTAAGCA 57.393 25.926 0.00 0.00 0.00 3.91
185 186 3.181427 TGCTTAGGGGAGGTGCTTAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
186 187 2.377193 TGCTTAGGGGAGGTGCTTAAAA 59.623 45.455 0.00 0.00 0.00 1.52
187 188 1.989586 TGCTTAGGGGAGGTGCTTAAA 59.010 47.619 0.00 0.00 0.00 1.52
188 189 1.663911 TGCTTAGGGGAGGTGCTTAA 58.336 50.000 0.00 0.00 0.00 1.85
189 190 1.768870 GATGCTTAGGGGAGGTGCTTA 59.231 52.381 0.00 0.00 0.00 3.09
190 191 0.548510 GATGCTTAGGGGAGGTGCTT 59.451 55.000 0.00 0.00 0.00 3.91
191 192 0.327000 AGATGCTTAGGGGAGGTGCT 60.327 55.000 0.00 0.00 0.00 4.40
192 193 0.548510 AAGATGCTTAGGGGAGGTGC 59.451 55.000 0.00 0.00 0.00 5.01
193 194 1.133976 CCAAGATGCTTAGGGGAGGTG 60.134 57.143 0.00 0.00 0.00 4.00
194 195 1.216990 CCAAGATGCTTAGGGGAGGT 58.783 55.000 0.00 0.00 0.00 3.85
195 196 1.511613 TCCAAGATGCTTAGGGGAGG 58.488 55.000 0.00 0.00 0.00 4.30
196 197 3.117738 ACAATCCAAGATGCTTAGGGGAG 60.118 47.826 0.00 0.00 0.00 4.30
197 198 2.852449 ACAATCCAAGATGCTTAGGGGA 59.148 45.455 0.00 0.00 0.00 4.81
198 199 3.303351 ACAATCCAAGATGCTTAGGGG 57.697 47.619 0.00 0.00 0.00 4.79
199 200 4.780815 TGTACAATCCAAGATGCTTAGGG 58.219 43.478 0.00 0.00 0.00 3.53
200 201 5.297776 CCTTGTACAATCCAAGATGCTTAGG 59.702 44.000 9.13 0.00 41.44 2.69
201 202 5.220931 GCCTTGTACAATCCAAGATGCTTAG 60.221 44.000 9.13 0.00 41.44 2.18
202 203 4.640201 GCCTTGTACAATCCAAGATGCTTA 59.360 41.667 9.13 0.00 41.44 3.09
203 204 3.445096 GCCTTGTACAATCCAAGATGCTT 59.555 43.478 9.13 0.00 41.44 3.91
204 205 3.019564 GCCTTGTACAATCCAAGATGCT 58.980 45.455 9.13 0.00 41.44 3.79
205 206 2.099756 GGCCTTGTACAATCCAAGATGC 59.900 50.000 9.13 2.54 41.44 3.91
206 207 3.624777 AGGCCTTGTACAATCCAAGATG 58.375 45.455 21.82 5.36 41.44 2.90
207 208 4.322057 AAGGCCTTGTACAATCCAAGAT 57.678 40.909 19.73 8.38 41.44 2.40
208 209 3.806949 AAGGCCTTGTACAATCCAAGA 57.193 42.857 19.73 0.00 41.44 3.02
209 210 5.192927 TCATAAGGCCTTGTACAATCCAAG 58.807 41.667 28.77 6.18 39.19 3.61
210 211 5.186256 TCATAAGGCCTTGTACAATCCAA 57.814 39.130 28.77 3.74 0.00 3.53
211 212 4.853468 TCATAAGGCCTTGTACAATCCA 57.147 40.909 28.77 4.58 0.00 3.41
212 213 4.036852 GCTTCATAAGGCCTTGTACAATCC 59.963 45.833 28.77 13.07 0.00 3.01
213 214 5.175090 GCTTCATAAGGCCTTGTACAATC 57.825 43.478 28.77 9.35 0.00 2.67
235 236 1.756538 GTATCCAAACAGGGCCAATGG 59.243 52.381 6.18 8.47 38.24 3.16
236 237 1.756538 GGTATCCAAACAGGGCCAATG 59.243 52.381 6.18 5.16 38.24 2.82
237 238 1.645919 AGGTATCCAAACAGGGCCAAT 59.354 47.619 6.18 0.00 38.24 3.16
238 239 1.080638 AGGTATCCAAACAGGGCCAA 58.919 50.000 6.18 0.00 38.24 4.52
239 240 1.843851 CTAGGTATCCAAACAGGGCCA 59.156 52.381 6.18 0.00 38.24 5.36
240 241 1.143073 CCTAGGTATCCAAACAGGGCC 59.857 57.143 0.00 0.00 38.24 5.80
241 242 1.844497 ACCTAGGTATCCAAACAGGGC 59.156 52.381 14.41 0.00 38.24 5.19
242 243 4.966805 TCTAACCTAGGTATCCAAACAGGG 59.033 45.833 16.67 0.00 38.24 4.45
243 244 5.661759 ACTCTAACCTAGGTATCCAAACAGG 59.338 44.000 16.67 0.52 39.47 4.00
244 245 6.793505 ACTCTAACCTAGGTATCCAAACAG 57.206 41.667 16.67 5.53 0.00 3.16
245 246 7.897565 ACTAACTCTAACCTAGGTATCCAAACA 59.102 37.037 16.67 0.00 0.00 2.83
246 247 8.303780 ACTAACTCTAACCTAGGTATCCAAAC 57.696 38.462 16.67 0.00 0.00 2.93
247 248 8.906238 AACTAACTCTAACCTAGGTATCCAAA 57.094 34.615 16.67 0.00 0.00 3.28
248 249 8.906238 AAACTAACTCTAACCTAGGTATCCAA 57.094 34.615 16.67 0.00 0.00 3.53
249 250 8.755977 CAAAACTAACTCTAACCTAGGTATCCA 58.244 37.037 16.67 0.00 0.00 3.41
250 251 8.202811 CCAAAACTAACTCTAACCTAGGTATCC 58.797 40.741 16.67 0.00 0.00 2.59
251 252 8.756927 ACCAAAACTAACTCTAACCTAGGTATC 58.243 37.037 16.67 0.00 0.00 2.24
252 253 8.676397 ACCAAAACTAACTCTAACCTAGGTAT 57.324 34.615 16.67 8.29 0.00 2.73
253 254 8.496534 AACCAAAACTAACTCTAACCTAGGTA 57.503 34.615 16.67 0.00 0.00 3.08
254 255 7.384524 AACCAAAACTAACTCTAACCTAGGT 57.615 36.000 9.21 9.21 0.00 3.08
255 256 8.591940 ACTAACCAAAACTAACTCTAACCTAGG 58.408 37.037 7.41 7.41 0.00 3.02
256 257 9.993454 AACTAACCAAAACTAACTCTAACCTAG 57.007 33.333 0.00 0.00 0.00 3.02
257 258 9.768662 CAACTAACCAAAACTAACTCTAACCTA 57.231 33.333 0.00 0.00 0.00 3.08
258 259 8.488668 TCAACTAACCAAAACTAACTCTAACCT 58.511 33.333 0.00 0.00 0.00 3.50
259 260 8.667076 TCAACTAACCAAAACTAACTCTAACC 57.333 34.615 0.00 0.00 0.00 2.85
260 261 8.771766 CCTCAACTAACCAAAACTAACTCTAAC 58.228 37.037 0.00 0.00 0.00 2.34
261 262 7.443272 GCCTCAACTAACCAAAACTAACTCTAA 59.557 37.037 0.00 0.00 0.00 2.10
262 263 6.932960 GCCTCAACTAACCAAAACTAACTCTA 59.067 38.462 0.00 0.00 0.00 2.43
263 264 5.763698 GCCTCAACTAACCAAAACTAACTCT 59.236 40.000 0.00 0.00 0.00 3.24
264 265 5.763698 AGCCTCAACTAACCAAAACTAACTC 59.236 40.000 0.00 0.00 0.00 3.01
265 266 5.691896 AGCCTCAACTAACCAAAACTAACT 58.308 37.500 0.00 0.00 0.00 2.24
266 267 5.529800 TGAGCCTCAACTAACCAAAACTAAC 59.470 40.000 0.00 0.00 0.00 2.34
267 268 5.686753 TGAGCCTCAACTAACCAAAACTAA 58.313 37.500 0.00 0.00 0.00 2.24
268 269 5.298989 TGAGCCTCAACTAACCAAAACTA 57.701 39.130 0.00 0.00 0.00 2.24
269 270 4.164843 TGAGCCTCAACTAACCAAAACT 57.835 40.909 0.00 0.00 0.00 2.66
270 271 4.911514 TTGAGCCTCAACTAACCAAAAC 57.088 40.909 2.24 0.00 30.26 2.43
271 272 7.430441 GTTATTTGAGCCTCAACTAACCAAAA 58.570 34.615 25.62 4.71 42.08 2.44
272 273 6.977213 GTTATTTGAGCCTCAACTAACCAAA 58.023 36.000 25.62 5.33 42.08 3.28
273 274 6.569179 GTTATTTGAGCCTCAACTAACCAA 57.431 37.500 25.62 5.96 42.08 3.67
276 277 5.007682 TGGGTTATTTGAGCCTCAACTAAC 58.992 41.667 26.97 26.97 44.65 2.34
277 278 5.249780 TGGGTTATTTGAGCCTCAACTAA 57.750 39.130 6.65 9.77 35.89 2.24
278 279 4.919774 TGGGTTATTTGAGCCTCAACTA 57.080 40.909 6.65 3.35 35.89 2.24
279 280 3.806949 TGGGTTATTTGAGCCTCAACT 57.193 42.857 6.65 4.45 35.89 3.16
280 281 4.864704 TTTGGGTTATTTGAGCCTCAAC 57.135 40.909 6.65 0.00 35.89 3.18
281 282 4.898861 ACTTTTGGGTTATTTGAGCCTCAA 59.101 37.500 2.24 2.24 38.04 3.02
282 283 4.479158 ACTTTTGGGTTATTTGAGCCTCA 58.521 39.130 0.00 0.00 38.04 3.86
283 284 6.183360 GGATACTTTTGGGTTATTTGAGCCTC 60.183 42.308 0.00 0.00 38.04 4.70
284 285 5.656859 GGATACTTTTGGGTTATTTGAGCCT 59.343 40.000 0.00 0.00 38.04 4.58
285 286 5.420739 TGGATACTTTTGGGTTATTTGAGCC 59.579 40.000 0.00 0.00 35.98 4.70
286 287 6.524101 TGGATACTTTTGGGTTATTTGAGC 57.476 37.500 0.00 0.00 37.61 4.26
287 288 8.364142 TGTTTGGATACTTTTGGGTTATTTGAG 58.636 33.333 0.00 0.00 37.61 3.02
288 289 8.251383 TGTTTGGATACTTTTGGGTTATTTGA 57.749 30.769 0.00 0.00 37.61 2.69
289 290 8.934825 CATGTTTGGATACTTTTGGGTTATTTG 58.065 33.333 0.00 0.00 37.61 2.32
290 291 8.100164 CCATGTTTGGATACTTTTGGGTTATTT 58.900 33.333 0.00 0.00 46.92 1.40
291 292 7.236640 ACCATGTTTGGATACTTTTGGGTTATT 59.763 33.333 0.00 0.00 46.92 1.40
292 293 6.728632 ACCATGTTTGGATACTTTTGGGTTAT 59.271 34.615 0.00 0.00 46.92 1.89
293 294 6.015010 CACCATGTTTGGATACTTTTGGGTTA 60.015 38.462 0.00 0.00 46.92 2.85
294 295 4.904853 ACCATGTTTGGATACTTTTGGGTT 59.095 37.500 0.00 0.00 46.92 4.11
295 296 4.283212 CACCATGTTTGGATACTTTTGGGT 59.717 41.667 0.00 0.00 46.92 4.51
296 297 4.322650 CCACCATGTTTGGATACTTTTGGG 60.323 45.833 4.84 0.00 46.92 4.12
297 298 4.322650 CCCACCATGTTTGGATACTTTTGG 60.323 45.833 11.41 0.00 46.92 3.28
298 299 4.283212 ACCCACCATGTTTGGATACTTTTG 59.717 41.667 11.41 0.00 46.92 2.44
299 300 4.488770 ACCCACCATGTTTGGATACTTTT 58.511 39.130 11.41 0.00 46.92 2.27
300 301 4.126520 ACCCACCATGTTTGGATACTTT 57.873 40.909 11.41 0.00 46.92 2.66
301 302 3.825908 ACCCACCATGTTTGGATACTT 57.174 42.857 11.41 0.00 46.92 2.24
302 303 3.825908 AACCCACCATGTTTGGATACT 57.174 42.857 11.41 0.00 46.92 2.12
303 304 4.595986 ACTAACCCACCATGTTTGGATAC 58.404 43.478 11.41 0.00 46.92 2.24
304 305 4.938575 ACTAACCCACCATGTTTGGATA 57.061 40.909 11.41 4.70 46.92 2.59
305 306 3.825908 ACTAACCCACCATGTTTGGAT 57.174 42.857 11.41 3.90 46.92 3.41
306 307 3.603965 AACTAACCCACCATGTTTGGA 57.396 42.857 11.41 0.00 46.92 3.53
308 309 3.244044 CCCAAACTAACCCACCATGTTTG 60.244 47.826 0.00 0.00 43.83 2.93
309 310 2.969262 CCCAAACTAACCCACCATGTTT 59.031 45.455 0.00 0.00 0.00 2.83
310 311 2.090999 ACCCAAACTAACCCACCATGTT 60.091 45.455 0.00 0.00 0.00 2.71
311 312 1.501604 ACCCAAACTAACCCACCATGT 59.498 47.619 0.00 0.00 0.00 3.21
312 313 2.302587 ACCCAAACTAACCCACCATG 57.697 50.000 0.00 0.00 0.00 3.66
313 314 3.399983 ACTAACCCAAACTAACCCACCAT 59.600 43.478 0.00 0.00 0.00 3.55
314 315 2.784682 ACTAACCCAAACTAACCCACCA 59.215 45.455 0.00 0.00 0.00 4.17
315 316 3.513909 ACTAACCCAAACTAACCCACC 57.486 47.619 0.00 0.00 0.00 4.61
316 317 3.570975 CCAACTAACCCAAACTAACCCAC 59.429 47.826 0.00 0.00 0.00 4.61
317 318 3.462579 TCCAACTAACCCAAACTAACCCA 59.537 43.478 0.00 0.00 0.00 4.51
318 319 4.103013 TCCAACTAACCCAAACTAACCC 57.897 45.455 0.00 0.00 0.00 4.11
319 320 5.567430 AGATCCAACTAACCCAAACTAACC 58.433 41.667 0.00 0.00 0.00 2.85
320 321 8.037382 GTTAGATCCAACTAACCCAAACTAAC 57.963 38.462 0.00 0.00 43.43 2.34
330 331 3.371273 GGGGTGGGTTAGATCCAACTAAC 60.371 52.174 4.01 0.00 46.41 2.34
331 332 2.848071 GGGGTGGGTTAGATCCAACTAA 59.152 50.000 4.01 0.00 41.54 2.24
332 333 2.225934 TGGGGTGGGTTAGATCCAACTA 60.226 50.000 4.01 0.00 41.54 2.24
333 334 1.296002 GGGGTGGGTTAGATCCAACT 58.704 55.000 4.01 0.00 41.54 3.16
334 335 0.996583 TGGGGTGGGTTAGATCCAAC 59.003 55.000 0.00 0.00 41.11 3.77
335 336 1.761711 TTGGGGTGGGTTAGATCCAA 58.238 50.000 0.00 0.00 35.86 3.53
336 337 1.761711 TTTGGGGTGGGTTAGATCCA 58.238 50.000 0.00 0.00 0.00 3.41
337 338 2.911552 TTTTGGGGTGGGTTAGATCC 57.088 50.000 0.00 0.00 0.00 3.36
354 355 3.908103 TCCTCTAGTGTGGGCTAGTTTTT 59.092 43.478 0.00 0.00 39.44 1.94
355 356 3.515901 CTCCTCTAGTGTGGGCTAGTTTT 59.484 47.826 0.00 0.00 39.44 2.43
356 357 3.100671 CTCCTCTAGTGTGGGCTAGTTT 58.899 50.000 0.00 0.00 39.44 2.66
357 358 2.741145 CTCCTCTAGTGTGGGCTAGTT 58.259 52.381 0.00 0.00 39.44 2.24
358 359 1.686741 GCTCCTCTAGTGTGGGCTAGT 60.687 57.143 0.00 0.00 39.44 2.57
359 360 1.036707 GCTCCTCTAGTGTGGGCTAG 58.963 60.000 0.00 0.00 39.70 3.42
360 361 0.631753 AGCTCCTCTAGTGTGGGCTA 59.368 55.000 6.03 0.00 34.23 3.93
361 362 0.252467 AAGCTCCTCTAGTGTGGGCT 60.252 55.000 0.00 2.85 36.02 5.19
362 363 1.486211 TAAGCTCCTCTAGTGTGGGC 58.514 55.000 0.00 0.00 0.00 5.36
363 364 4.446371 CAAATAAGCTCCTCTAGTGTGGG 58.554 47.826 0.00 0.00 0.00 4.61
364 365 4.446371 CCAAATAAGCTCCTCTAGTGTGG 58.554 47.826 0.00 0.00 0.00 4.17
365 366 4.080863 ACCCAAATAAGCTCCTCTAGTGTG 60.081 45.833 0.00 0.00 0.00 3.82
366 367 4.104831 ACCCAAATAAGCTCCTCTAGTGT 58.895 43.478 0.00 0.00 0.00 3.55
367 368 4.762289 ACCCAAATAAGCTCCTCTAGTG 57.238 45.455 0.00 0.00 0.00 2.74
368 369 5.965091 ACTAACCCAAATAAGCTCCTCTAGT 59.035 40.000 0.00 0.00 0.00 2.57
369 370 6.487299 ACTAACCCAAATAAGCTCCTCTAG 57.513 41.667 0.00 0.00 0.00 2.43
370 371 6.672657 AGAACTAACCCAAATAAGCTCCTCTA 59.327 38.462 0.00 0.00 0.00 2.43
371 372 5.489278 AGAACTAACCCAAATAAGCTCCTCT 59.511 40.000 0.00 0.00 0.00 3.69
372 373 5.746284 AGAACTAACCCAAATAAGCTCCTC 58.254 41.667 0.00 0.00 0.00 3.71
373 374 5.489278 AGAGAACTAACCCAAATAAGCTCCT 59.511 40.000 0.00 0.00 0.00 3.69
374 375 5.746284 AGAGAACTAACCCAAATAAGCTCC 58.254 41.667 0.00 0.00 0.00 4.70
375 376 6.094186 CCAAGAGAACTAACCCAAATAAGCTC 59.906 42.308 0.00 0.00 0.00 4.09
376 377 5.946377 CCAAGAGAACTAACCCAAATAAGCT 59.054 40.000 0.00 0.00 0.00 3.74
377 378 5.125578 CCCAAGAGAACTAACCCAAATAAGC 59.874 44.000 0.00 0.00 0.00 3.09
378 379 5.125578 GCCCAAGAGAACTAACCCAAATAAG 59.874 44.000 0.00 0.00 0.00 1.73
379 380 5.014202 GCCCAAGAGAACTAACCCAAATAA 58.986 41.667 0.00 0.00 0.00 1.40
380 381 4.569015 GGCCCAAGAGAACTAACCCAAATA 60.569 45.833 0.00 0.00 0.00 1.40
381 382 3.431415 GCCCAAGAGAACTAACCCAAAT 58.569 45.455 0.00 0.00 0.00 2.32
382 383 2.490168 GGCCCAAGAGAACTAACCCAAA 60.490 50.000 0.00 0.00 0.00 3.28
383 384 1.074889 GGCCCAAGAGAACTAACCCAA 59.925 52.381 0.00 0.00 0.00 4.12
384 385 0.696501 GGCCCAAGAGAACTAACCCA 59.303 55.000 0.00 0.00 0.00 4.51
385 386 0.034380 GGGCCCAAGAGAACTAACCC 60.034 60.000 19.95 0.00 0.00 4.11
386 387 0.696501 TGGGCCCAAGAGAACTAACC 59.303 55.000 26.33 0.00 0.00 2.85
387 388 1.351350 AGTGGGCCCAAGAGAACTAAC 59.649 52.381 30.64 10.20 0.00 2.34
388 389 1.742308 AGTGGGCCCAAGAGAACTAA 58.258 50.000 30.64 0.00 0.00 2.24
389 390 2.634639 TAGTGGGCCCAAGAGAACTA 57.365 50.000 30.64 19.79 0.00 2.24
390 391 1.742308 TTAGTGGGCCCAAGAGAACT 58.258 50.000 30.64 20.98 0.00 3.01
391 392 2.579410 TTTAGTGGGCCCAAGAGAAC 57.421 50.000 30.64 13.71 0.00 3.01
392 393 3.603965 TTTTTAGTGGGCCCAAGAGAA 57.396 42.857 30.64 16.06 0.00 2.87
421 422 2.725227 TGGATGGGAGGGGTAACTTTTT 59.275 45.455 0.00 0.00 0.00 1.94
422 423 2.364190 TGGATGGGAGGGGTAACTTTT 58.636 47.619 0.00 0.00 0.00 2.27
423 424 2.068831 TGGATGGGAGGGGTAACTTT 57.931 50.000 0.00 0.00 0.00 2.66
424 425 2.042569 GTTTGGATGGGAGGGGTAACTT 59.957 50.000 0.00 0.00 0.00 2.66
425 426 1.639108 GTTTGGATGGGAGGGGTAACT 59.361 52.381 0.00 0.00 0.00 2.24
426 427 1.356398 TGTTTGGATGGGAGGGGTAAC 59.644 52.381 0.00 0.00 0.00 2.50
427 428 1.761711 TGTTTGGATGGGAGGGGTAA 58.238 50.000 0.00 0.00 0.00 2.85
428 429 1.568597 CATGTTTGGATGGGAGGGGTA 59.431 52.381 0.00 0.00 0.00 3.69
429 430 0.336048 CATGTTTGGATGGGAGGGGT 59.664 55.000 0.00 0.00 0.00 4.95
430 431 0.397535 CCATGTTTGGATGGGAGGGG 60.398 60.000 0.00 0.00 46.92 4.79
431 432 0.336048 ACCATGTTTGGATGGGAGGG 59.664 55.000 0.00 0.00 46.46 4.30
432 433 1.285962 AGACCATGTTTGGATGGGAGG 59.714 52.381 0.00 0.00 46.46 4.30
433 434 2.814805 AGACCATGTTTGGATGGGAG 57.185 50.000 0.00 0.00 46.46 4.30
434 435 4.044065 ACTTTAGACCATGTTTGGATGGGA 59.956 41.667 0.00 0.00 46.46 4.37
435 436 4.344104 ACTTTAGACCATGTTTGGATGGG 58.656 43.478 0.00 0.00 46.46 4.00
436 437 6.180472 ACTACTTTAGACCATGTTTGGATGG 58.820 40.000 0.00 0.00 46.92 3.51
437 438 6.878923 TGACTACTTTAGACCATGTTTGGATG 59.121 38.462 0.00 0.00 46.92 3.51
438 439 7.016153 TGACTACTTTAGACCATGTTTGGAT 57.984 36.000 0.00 0.00 46.92 3.41
439 440 6.428083 TGACTACTTTAGACCATGTTTGGA 57.572 37.500 0.00 0.00 46.92 3.53
441 442 8.783093 TCATTTGACTACTTTAGACCATGTTTG 58.217 33.333 0.00 0.00 0.00 2.93
442 443 8.918202 TCATTTGACTACTTTAGACCATGTTT 57.082 30.769 0.00 0.00 0.00 2.83
443 444 9.520515 AATCATTTGACTACTTTAGACCATGTT 57.479 29.630 0.00 0.00 0.00 2.71
444 445 8.950210 CAATCATTTGACTACTTTAGACCATGT 58.050 33.333 0.00 0.00 34.60 3.21
445 446 8.400947 CCAATCATTTGACTACTTTAGACCATG 58.599 37.037 0.00 0.00 34.60 3.66
446 447 8.328758 TCCAATCATTTGACTACTTTAGACCAT 58.671 33.333 0.00 0.00 34.60 3.55
447 448 7.685481 TCCAATCATTTGACTACTTTAGACCA 58.315 34.615 0.00 0.00 34.60 4.02
448 449 8.561738 TTCCAATCATTTGACTACTTTAGACC 57.438 34.615 0.00 0.00 34.60 3.85
485 486 9.793259 GTTTGGATGATAGGGTTAGATTGATAA 57.207 33.333 0.00 0.00 0.00 1.75
486 487 8.944138 TGTTTGGATGATAGGGTTAGATTGATA 58.056 33.333 0.00 0.00 0.00 2.15
487 488 7.815383 TGTTTGGATGATAGGGTTAGATTGAT 58.185 34.615 0.00 0.00 0.00 2.57
488 489 7.206789 TGTTTGGATGATAGGGTTAGATTGA 57.793 36.000 0.00 0.00 0.00 2.57
489 490 6.016777 GCTGTTTGGATGATAGGGTTAGATTG 60.017 42.308 0.00 0.00 0.00 2.67
490 491 6.064717 GCTGTTTGGATGATAGGGTTAGATT 58.935 40.000 0.00 0.00 0.00 2.40
491 492 5.370880 AGCTGTTTGGATGATAGGGTTAGAT 59.629 40.000 0.00 0.00 0.00 1.98
492 493 4.721776 AGCTGTTTGGATGATAGGGTTAGA 59.278 41.667 0.00 0.00 0.00 2.10
493 494 5.041191 AGCTGTTTGGATGATAGGGTTAG 57.959 43.478 0.00 0.00 0.00 2.34
494 495 4.721776 AGAGCTGTTTGGATGATAGGGTTA 59.278 41.667 0.00 0.00 0.00 2.85
495 496 3.525199 AGAGCTGTTTGGATGATAGGGTT 59.475 43.478 0.00 0.00 0.00 4.11
496 497 3.118531 AGAGCTGTTTGGATGATAGGGT 58.881 45.455 0.00 0.00 0.00 4.34
497 498 3.853355 AGAGCTGTTTGGATGATAGGG 57.147 47.619 0.00 0.00 0.00 3.53
498 499 5.496133 CAAAGAGCTGTTTGGATGATAGG 57.504 43.478 24.75 0.00 34.34 2.57
507 508 5.757850 AACTCTAACCAAAGAGCTGTTTG 57.242 39.130 25.33 25.33 45.81 2.93
508 509 6.592870 ACTAACTCTAACCAAAGAGCTGTTT 58.407 36.000 2.40 2.40 45.81 2.83
509 510 6.176014 ACTAACTCTAACCAAAGAGCTGTT 57.824 37.500 0.00 0.00 45.81 3.16
510 511 5.810080 ACTAACTCTAACCAAAGAGCTGT 57.190 39.130 0.00 0.00 45.81 4.40
511 512 7.332182 CCTAAACTAACTCTAACCAAAGAGCTG 59.668 40.741 0.00 0.00 45.81 4.24
512 513 7.387643 CCTAAACTAACTCTAACCAAAGAGCT 58.612 38.462 0.86 0.00 45.81 4.09
513 514 6.594547 CCCTAAACTAACTCTAACCAAAGAGC 59.405 42.308 0.86 0.00 45.81 4.09
515 516 7.622502 ACCCTAAACTAACTCTAACCAAAGA 57.377 36.000 0.00 0.00 0.00 2.52
516 517 7.174426 CCAACCCTAAACTAACTCTAACCAAAG 59.826 40.741 0.00 0.00 0.00 2.77
517 518 6.999871 CCAACCCTAAACTAACTCTAACCAAA 59.000 38.462 0.00 0.00 0.00 3.28
518 519 6.101588 ACCAACCCTAAACTAACTCTAACCAA 59.898 38.462 0.00 0.00 0.00 3.67
519 520 5.608015 ACCAACCCTAAACTAACTCTAACCA 59.392 40.000 0.00 0.00 0.00 3.67
520 521 6.119240 ACCAACCCTAAACTAACTCTAACC 57.881 41.667 0.00 0.00 0.00 2.85
521 522 7.219322 TGAACCAACCCTAAACTAACTCTAAC 58.781 38.462 0.00 0.00 0.00 2.34
522 523 7.377696 TGAACCAACCCTAAACTAACTCTAA 57.622 36.000 0.00 0.00 0.00 2.10
523 524 6.999705 TGAACCAACCCTAAACTAACTCTA 57.000 37.500 0.00 0.00 0.00 2.43
524 525 5.899631 TGAACCAACCCTAAACTAACTCT 57.100 39.130 0.00 0.00 0.00 3.24
525 526 5.472478 CCTTGAACCAACCCTAAACTAACTC 59.528 44.000 0.00 0.00 0.00 3.01
526 527 5.103813 ACCTTGAACCAACCCTAAACTAACT 60.104 40.000 0.00 0.00 0.00 2.24
527 528 5.135383 ACCTTGAACCAACCCTAAACTAAC 58.865 41.667 0.00 0.00 0.00 2.34
528 529 5.391577 ACCTTGAACCAACCCTAAACTAA 57.608 39.130 0.00 0.00 0.00 2.24
529 530 5.391577 AACCTTGAACCAACCCTAAACTA 57.608 39.130 0.00 0.00 0.00 2.24
530 531 3.965470 ACCTTGAACCAACCCTAAACT 57.035 42.857 0.00 0.00 0.00 2.66
531 532 5.379187 TCTAACCTTGAACCAACCCTAAAC 58.621 41.667 0.00 0.00 0.00 2.01
532 533 5.649970 TCTAACCTTGAACCAACCCTAAA 57.350 39.130 0.00 0.00 0.00 1.85
533 534 5.649970 TTCTAACCTTGAACCAACCCTAA 57.350 39.130 0.00 0.00 0.00 2.69
534 535 5.550403 AGATTCTAACCTTGAACCAACCCTA 59.450 40.000 0.00 0.00 0.00 3.53
535 536 4.354087 AGATTCTAACCTTGAACCAACCCT 59.646 41.667 0.00 0.00 0.00 4.34
536 537 4.663334 AGATTCTAACCTTGAACCAACCC 58.337 43.478 0.00 0.00 0.00 4.11
537 538 6.940867 AGTTAGATTCTAACCTTGAACCAACC 59.059 38.462 25.81 4.05 0.00 3.77
538 539 7.878644 AGAGTTAGATTCTAACCTTGAACCAAC 59.121 37.037 25.81 6.28 0.00 3.77
539 540 7.974504 AGAGTTAGATTCTAACCTTGAACCAA 58.025 34.615 25.81 0.00 0.00 3.67
540 541 7.554959 AGAGTTAGATTCTAACCTTGAACCA 57.445 36.000 25.81 0.00 0.00 3.67
541 542 9.368674 GTTAGAGTTAGATTCTAACCTTGAACC 57.631 37.037 25.81 10.17 45.71 3.62
570 571 7.976734 CCTGTTTGGATACTCTAACTCAGTTAG 59.023 40.741 17.42 17.42 41.36 2.34
571 572 7.093465 CCCTGTTTGGATACTCTAACTCAGTTA 60.093 40.741 0.00 0.00 38.35 2.24
572 573 6.295916 CCCTGTTTGGATACTCTAACTCAGTT 60.296 42.308 0.00 0.00 38.35 3.16
573 574 5.187967 CCCTGTTTGGATACTCTAACTCAGT 59.812 44.000 0.00 0.00 38.35 3.41
574 575 5.665459 CCCTGTTTGGATACTCTAACTCAG 58.335 45.833 0.00 0.00 38.35 3.35
575 576 4.081087 GCCCTGTTTGGATACTCTAACTCA 60.081 45.833 0.00 0.00 38.35 3.41
576 577 4.443621 GCCCTGTTTGGATACTCTAACTC 58.556 47.826 0.00 0.00 38.35 3.01
577 578 3.200165 GGCCCTGTTTGGATACTCTAACT 59.800 47.826 0.00 0.00 38.35 2.24
578 579 3.054655 TGGCCCTGTTTGGATACTCTAAC 60.055 47.826 0.00 0.00 38.35 2.34
579 580 3.186283 TGGCCCTGTTTGGATACTCTAA 58.814 45.455 0.00 0.00 38.35 2.10
580 581 2.840511 TGGCCCTGTTTGGATACTCTA 58.159 47.619 0.00 0.00 38.35 2.43
581 582 1.668826 TGGCCCTGTTTGGATACTCT 58.331 50.000 0.00 0.00 38.35 3.24
582 583 2.689983 CAATGGCCCTGTTTGGATACTC 59.310 50.000 0.00 0.00 38.35 2.59
583 584 2.311542 TCAATGGCCCTGTTTGGATACT 59.688 45.455 0.00 0.00 38.35 2.12
584 585 2.427095 GTCAATGGCCCTGTTTGGATAC 59.573 50.000 0.00 0.00 38.35 2.24
585 586 2.311542 AGTCAATGGCCCTGTTTGGATA 59.688 45.455 0.00 0.00 38.35 2.59
586 587 1.077663 AGTCAATGGCCCTGTTTGGAT 59.922 47.619 0.00 0.00 38.35 3.41
587 588 0.482446 AGTCAATGGCCCTGTTTGGA 59.518 50.000 0.00 0.00 38.35 3.53
588 589 1.341080 AAGTCAATGGCCCTGTTTGG 58.659 50.000 0.00 0.00 0.00 3.28
589 590 2.289010 GGAAAGTCAATGGCCCTGTTTG 60.289 50.000 0.00 0.00 0.00 2.93
590 591 1.970640 GGAAAGTCAATGGCCCTGTTT 59.029 47.619 0.00 0.00 0.00 2.83
591 592 1.147817 AGGAAAGTCAATGGCCCTGTT 59.852 47.619 0.00 0.00 0.00 3.16
592 593 0.779997 AGGAAAGTCAATGGCCCTGT 59.220 50.000 0.00 0.00 0.00 4.00
593 594 1.180029 CAGGAAAGTCAATGGCCCTG 58.820 55.000 0.00 0.00 35.75 4.45
594 595 0.779997 ACAGGAAAGTCAATGGCCCT 59.220 50.000 0.00 0.00 0.00 5.19
595 596 0.890683 CACAGGAAAGTCAATGGCCC 59.109 55.000 0.00 0.00 0.00 5.80
596 597 0.890683 CCACAGGAAAGTCAATGGCC 59.109 55.000 0.00 0.00 0.00 5.36
612 613 4.521256 GTGTATAGACAGGATCTCTCCCAC 59.479 50.000 0.00 0.00 43.21 4.61
618 619 6.269315 CAACACAGTGTATAGACAGGATCTC 58.731 44.000 6.63 0.00 39.04 2.75
626 627 3.871594 GCATCCCAACACAGTGTATAGAC 59.128 47.826 6.63 0.00 0.00 2.59
634 635 0.767375 ACTCAGCATCCCAACACAGT 59.233 50.000 0.00 0.00 0.00 3.55
638 639 7.716799 ATTTTATTAACTCAGCATCCCAACA 57.283 32.000 0.00 0.00 0.00 3.33
724 727 4.464069 TTTGTTCTTGGTCCCAAAGTTG 57.536 40.909 0.00 0.00 35.33 3.16
733 736 3.314080 TGGACGTGAATTTGTTCTTGGTC 59.686 43.478 0.00 0.00 0.00 4.02
745 748 6.518493 ACGTATTAATGGTATGGACGTGAAT 58.482 36.000 8.97 0.00 40.24 2.57
761 764 3.861113 GGCGATCAACTGACACGTATTAA 59.139 43.478 0.00 0.00 32.62 1.40
782 788 2.681848 GAGCATTTGATCACTGACCAGG 59.318 50.000 8.34 0.00 0.00 4.45
851 857 4.744570 TGTCGTACTTCAGATTGGTCATC 58.255 43.478 0.00 0.00 0.00 2.92
888 897 8.576442 GTGTTTTCTGGATCTCTTTTGGATTAA 58.424 33.333 0.00 0.00 0.00 1.40
945 961 0.971386 TGATGAGTGCTGACTGCTGA 59.029 50.000 5.87 0.00 43.37 4.26
946 962 1.360820 CTGATGAGTGCTGACTGCTG 58.639 55.000 5.87 0.00 43.37 4.41
947 963 0.391395 GCTGATGAGTGCTGACTGCT 60.391 55.000 5.87 0.00 43.37 4.24
948 964 1.694018 CGCTGATGAGTGCTGACTGC 61.694 60.000 0.00 0.00 43.25 4.40
950 966 0.173029 CTCGCTGATGAGTGCTGACT 59.827 55.000 0.00 0.00 33.98 3.41
951 967 1.419874 GCTCGCTGATGAGTGCTGAC 61.420 60.000 0.00 0.00 38.28 3.51
1015 1031 2.690452 CGGGAGGAGGAGGAGGAA 59.310 66.667 0.00 0.00 0.00 3.36
1026 1042 4.787280 AGGTGGAGGAGCGGGAGG 62.787 72.222 0.00 0.00 0.00 4.30
1365 1381 3.760035 GTGCGGAGGAGCTCGGAA 61.760 66.667 7.83 0.00 38.13 4.30
1404 1420 4.459089 GTCCAGCTGACGCCCTCC 62.459 72.222 17.39 0.00 36.60 4.30
1539 1555 2.022195 CCGTGAAACTCGAGGGAGATA 58.978 52.381 18.41 0.00 43.27 1.98
1540 1556 0.818296 CCGTGAAACTCGAGGGAGAT 59.182 55.000 18.41 0.00 43.27 2.75
1665 1681 3.133014 ATCGGCAGGATCAGGTCG 58.867 61.111 3.74 3.74 0.00 4.79
1703 1719 2.573609 GATGCGGAACCAGTAGCCGT 62.574 60.000 11.94 0.00 46.38 5.68
1743 1759 1.079503 GAATGGTCACGAGCTTGGAC 58.920 55.000 5.79 9.61 0.00 4.02
1788 1804 2.214920 AGGGGACACGAACACCTCC 61.215 63.158 0.00 0.00 36.25 4.30
1959 1975 1.065272 GGGTTAATGCCTCCCGTGTAA 60.065 52.381 0.00 0.00 0.00 2.41
1968 1984 1.139058 CAGTAGAGCGGGTTAATGCCT 59.861 52.381 0.00 0.00 0.00 4.75
1974 1990 1.956629 GCTGCCAGTAGAGCGGGTTA 61.957 60.000 0.00 0.00 37.09 2.85
2079 2095 2.456119 GCTGATGCCGAACTCGTGG 61.456 63.158 0.00 0.00 37.74 4.94
2307 2323 1.300620 CTCGGTCGTGAAGTTGCCA 60.301 57.895 0.00 0.00 0.00 4.92
2316 2332 1.442184 CGTCTCAACCTCGGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
2328 2344 3.071206 GCCTCCAGCTCCGTCTCA 61.071 66.667 0.00 0.00 38.99 3.27
2389 2405 1.340399 TGCTCCGCCTTCATCTGGAT 61.340 55.000 0.00 0.00 0.00 3.41
2427 2443 4.728110 TTCCTCGCCTCCGACCGA 62.728 66.667 0.00 0.00 38.82 4.69
2551 2567 1.803519 CCGTCTCGAGCTTGAGTGC 60.804 63.158 26.86 19.85 37.28 4.40
2553 2569 1.309499 CCTCCGTCTCGAGCTTGAGT 61.309 60.000 26.86 0.00 37.28 3.41
2903 2922 1.134521 CGACGGATCTGGGATTCCAAA 60.135 52.381 6.47 0.00 43.51 3.28
2904 2923 0.464036 CGACGGATCTGGGATTCCAA 59.536 55.000 6.47 0.00 43.51 3.53
2905 2924 1.399744 CCGACGGATCTGGGATTCCA 61.400 60.000 8.64 0.00 41.58 3.53
2922 2941 0.790814 GAACCTGCTCGAAACTTCCG 59.209 55.000 0.00 0.00 0.00 4.30
3019 3038 7.753580 TGTACTACATCATCACTTCACGTAAAG 59.246 37.037 0.00 0.00 0.00 1.85
3023 3042 5.399858 GTGTACTACATCATCACTTCACGT 58.600 41.667 0.00 0.00 0.00 4.49
3024 3043 4.495828 CGTGTACTACATCATCACTTCACG 59.504 45.833 0.00 0.00 38.70 4.35
3374 3401 3.118261 GCCTGGACACTGGATGATTAGAA 60.118 47.826 0.00 0.00 37.89 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.