Multiple sequence alignment - TraesCS1B01G257400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G257400 chr1B 100.000 6717 0 0 1 6717 453187430 453194146 0.000000e+00 12405.0
1 TraesCS1B01G257400 chr1B 87.241 627 63 11 4974 5591 453202645 453203263 0.000000e+00 699.0
2 TraesCS1B01G257400 chr1B 89.036 529 55 1 4953 5481 453276110 453276635 0.000000e+00 652.0
3 TraesCS1B01G257400 chr1B 85.113 665 66 22 4086 4729 453200574 453201226 0.000000e+00 649.0
4 TraesCS1B01G257400 chr1B 81.406 441 52 11 2416 2852 453212141 453212555 3.880000e-87 333.0
5 TraesCS1B01G257400 chr1B 94.565 184 9 1 6210 6392 453276854 453277037 3.970000e-72 283.0
6 TraesCS1B01G257400 chr1B 95.122 164 8 0 5818 5981 388400022 388400185 6.680000e-65 259.0
7 TraesCS1B01G257400 chr1B 89.041 73 6 2 6409 6480 453209071 453209142 9.280000e-14 89.8
8 TraesCS1B01G257400 chr1B 94.444 54 3 0 41 94 134947665 134947612 4.320000e-12 84.2
9 TraesCS1B01G257400 chr1B 84.810 79 10 2 5667 5745 453208386 453208462 2.010000e-10 78.7
10 TraesCS1B01G257400 chr1A 96.334 2864 94 7 893 3750 437582639 437585497 0.000000e+00 4697.0
11 TraesCS1B01G257400 chr1A 92.981 1781 89 17 4043 5819 437585496 437587244 0.000000e+00 2564.0
12 TraesCS1B01G257400 chr1A 95.762 755 16 5 5978 6717 437587244 437587997 0.000000e+00 1203.0
13 TraesCS1B01G257400 chr1A 97.635 296 6 1 3749 4044 464178030 464177736 2.160000e-139 507.0
14 TraesCS1B01G257400 chr1A 83.669 447 53 13 2416 2857 437592085 437592516 2.920000e-108 403.0
15 TraesCS1B01G257400 chr1A 81.750 400 56 10 2941 3327 437692269 437691874 1.090000e-82 318.0
16 TraesCS1B01G257400 chr1A 78.797 316 29 22 6319 6606 437712063 437712368 1.920000e-40 178.0
17 TraesCS1B01G257400 chr1A 83.333 198 18 10 5551 5745 437590199 437590384 1.160000e-37 169.0
18 TraesCS1B01G257400 chr1A 88.406 69 7 1 6411 6478 437590878 437590946 1.550000e-11 82.4
19 TraesCS1B01G257400 chr1A 91.304 46 1 2 5977 6019 437590465 437590510 7.270000e-05 60.2
20 TraesCS1B01G257400 chr1D 95.957 1781 45 13 4043 5819 338522853 338524610 0.000000e+00 2865.0
21 TraesCS1B01G257400 chr1D 97.095 1549 29 3 2209 3750 338521315 338522854 0.000000e+00 2597.0
22 TraesCS1B01G257400 chr1D 87.821 1634 121 37 585 2198 338519760 338521335 0.000000e+00 1844.0
23 TraesCS1B01G257400 chr1D 94.248 765 16 14 5969 6717 338524600 338525352 0.000000e+00 1144.0
24 TraesCS1B01G257400 chr1D 82.918 1083 123 31 4086 5125 338534263 338535326 0.000000e+00 918.0
25 TraesCS1B01G257400 chr1D 87.126 668 69 11 4953 5609 338539941 338540602 0.000000e+00 741.0
26 TraesCS1B01G257400 chr1D 88.623 167 18 1 2416 2581 338537010 338537176 1.140000e-47 202.0
27 TraesCS1B01G257400 chr2B 94.398 482 27 0 1 482 93624161 93623680 0.000000e+00 741.0
28 TraesCS1B01G257400 chr2B 97.635 296 7 0 3749 4044 283154859 283155154 6.010000e-140 508.0
29 TraesCS1B01G257400 chr2B 97.635 296 6 1 3749 4044 204947492 204947198 2.160000e-139 507.0
30 TraesCS1B01G257400 chr2B 94.118 85 5 0 3484 3568 679898335 679898251 5.470000e-26 130.0
31 TraesCS1B01G257400 chr2B 89.157 83 9 0 431 513 93623673 93623591 3.310000e-18 104.0
32 TraesCS1B01G257400 chr4B 91.797 512 41 1 2 513 307204724 307205234 0.000000e+00 712.0
33 TraesCS1B01G257400 chr4B 98.311 296 5 0 3749 4044 466828317 466828022 2.780000e-143 520.0
34 TraesCS1B01G257400 chr4B 96.364 165 6 0 5817 5981 417137435 417137599 8.580000e-69 272.0
35 TraesCS1B01G257400 chr4B 88.172 93 10 1 3477 3569 609499445 609499536 7.120000e-20 110.0
36 TraesCS1B01G257400 chr6A 87.992 508 61 0 1 508 514348224 514348731 9.640000e-168 601.0
37 TraesCS1B01G257400 chr6A 85.770 513 53 10 1 513 457350720 457351212 5.970000e-145 525.0
38 TraesCS1B01G257400 chr3B 97.973 296 6 0 3749 4044 468452978 468453273 1.290000e-141 514.0
39 TraesCS1B01G257400 chr3B 97.635 296 7 0 3749 4044 455862177 455861882 6.010000e-140 508.0
40 TraesCS1B01G257400 chr3B 95.758 165 7 0 5817 5981 141926421 141926585 3.990000e-67 267.0
41 TraesCS1B01G257400 chr3B 89.247 93 9 1 3484 3575 685063039 685063131 1.530000e-21 115.0
42 TraesCS1B01G257400 chr5D 97.342 301 7 1 3749 4048 391949961 391949661 1.670000e-140 510.0
43 TraesCS1B01G257400 chr5D 92.353 170 12 1 5815 5983 6096288 6096457 2.420000e-59 241.0
44 TraesCS1B01G257400 chr6B 97.635 296 7 0 3749 4044 410271192 410270897 6.010000e-140 508.0
45 TraesCS1B01G257400 chr6B 95.122 164 8 0 5818 5981 6040048 6040211 6.680000e-65 259.0
46 TraesCS1B01G257400 chr6D 97.952 293 5 1 3749 4041 90074607 90074898 2.160000e-139 507.0
47 TraesCS1B01G257400 chr7B 96.341 164 6 0 5818 5981 460772429 460772592 3.090000e-68 270.0
48 TraesCS1B01G257400 chr3D 95.758 165 7 0 5817 5981 566546034 566545870 3.990000e-67 267.0
49 TraesCS1B01G257400 chr3D 88.172 93 10 1 3484 3575 520220523 520220615 7.120000e-20 110.0
50 TraesCS1B01G257400 chr5B 94.643 168 9 0 5817 5984 257334972 257334805 1.860000e-65 261.0
51 TraesCS1B01G257400 chr5B 93.976 166 10 0 5818 5983 253175924 253176089 1.120000e-62 252.0
52 TraesCS1B01G257400 chr2A 94.118 85 5 0 3484 3568 706752990 706752906 5.470000e-26 130.0
53 TraesCS1B01G257400 chr2D 92.941 85 6 0 3484 3568 566989087 566989003 2.540000e-24 124.0
54 TraesCS1B01G257400 chr7A 88.660 97 10 1 3480 3575 202994989 202995085 4.260000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G257400 chr1B 453187430 453194146 6716 False 12405.000000 12405 100.000000 1 6717 1 chr1B.!!$F2 6716
1 TraesCS1B01G257400 chr1B 453200574 453203263 2689 False 674.000000 699 86.177000 4086 5591 2 chr1B.!!$F3 1505
2 TraesCS1B01G257400 chr1B 453276110 453277037 927 False 467.500000 652 91.800500 4953 6392 2 chr1B.!!$F5 1439
3 TraesCS1B01G257400 chr1A 437582639 437592516 9877 False 1311.228571 4697 90.255571 893 6717 7 chr1A.!!$F2 5824
4 TraesCS1B01G257400 chr1D 338519760 338525352 5592 False 2112.500000 2865 93.780250 585 6717 4 chr1D.!!$F1 6132
5 TraesCS1B01G257400 chr1D 338534263 338540602 6339 False 620.333333 918 86.222333 2416 5609 3 chr1D.!!$F2 3193
6 TraesCS1B01G257400 chr2B 93623591 93624161 570 True 422.500000 741 91.777500 1 513 2 chr2B.!!$R3 512
7 TraesCS1B01G257400 chr4B 307204724 307205234 510 False 712.000000 712 91.797000 2 513 1 chr4B.!!$F1 511
8 TraesCS1B01G257400 chr6A 514348224 514348731 507 False 601.000000 601 87.992000 1 508 1 chr6A.!!$F2 507


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
877 916 0.179100 AATCGCTCATGAGTCACCCG 60.179 55.000 23.38 17.18 0.00 5.28 F
1449 1494 0.026285 GCGCGCACTTGTGGTTATAG 59.974 55.000 29.10 0.00 0.00 1.31 F
1884 1934 1.753649 GCCTACTCTGAGCTGACATGA 59.246 52.381 4.19 0.00 0.00 3.07 F
3768 3828 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51 F
3790 3850 0.035458 AGTCACCTTAGGCTGTGCAC 59.965 55.000 10.75 10.75 32.51 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 1744 1.098050 AATGAACAGCCGGAGATTGC 58.902 50.000 5.05 0.00 0.00 3.56 R
2937 2987 0.457443 CTGGATGCACGTGCTAGAGA 59.543 55.000 37.59 20.41 42.66 3.10 R
3771 3831 0.035458 GTGCACAGCCTAAGGTGACT 59.965 55.000 13.17 0.00 44.53 3.41 R
5309 11439 0.107945 GCAGCTCATCGACTTCCCTT 60.108 55.000 0.00 0.00 0.00 3.95 R
5785 11925 1.146263 GCACCGGAATACCCTCCTG 59.854 63.158 9.46 0.00 32.82 3.86 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
237 238 3.976490 AACCTCGGATCTCGGCCCA 62.976 63.158 0.00 0.00 39.77 5.36
366 367 1.301716 GCTTGAGTCCAACCAGCGA 60.302 57.895 0.00 0.00 0.00 4.93
465 466 2.866028 GTCGAGAGCGGTGTACGT 59.134 61.111 0.00 0.00 46.52 3.57
466 467 1.686566 CGTCGAGAGCGGTGTACGTA 61.687 60.000 0.00 0.00 46.52 3.57
473 474 3.069946 CGGTGTACGTAGGGGCCA 61.070 66.667 4.39 0.00 37.93 5.36
474 475 2.648143 CGGTGTACGTAGGGGCCAA 61.648 63.158 4.39 0.00 37.93 4.52
475 476 1.678724 GGTGTACGTAGGGGCCAAA 59.321 57.895 4.39 0.00 0.00 3.28
476 477 0.392060 GGTGTACGTAGGGGCCAAAG 60.392 60.000 4.39 0.00 0.00 2.77
477 478 0.322648 GTGTACGTAGGGGCCAAAGT 59.677 55.000 4.39 3.74 0.00 2.66
478 479 0.322322 TGTACGTAGGGGCCAAAGTG 59.678 55.000 4.39 0.00 0.00 3.16
479 480 0.392060 GTACGTAGGGGCCAAAGTGG 60.392 60.000 4.39 0.00 41.55 4.00
518 519 4.802678 CGGGAGCTAGAGATCGGA 57.197 61.111 0.00 0.00 0.00 4.55
519 520 3.257935 CGGGAGCTAGAGATCGGAT 57.742 57.895 0.00 0.00 0.00 4.18
520 521 1.091537 CGGGAGCTAGAGATCGGATC 58.908 60.000 10.02 10.02 0.00 3.36
521 522 1.091537 GGGAGCTAGAGATCGGATCG 58.908 60.000 12.08 0.00 0.00 3.69
522 523 1.091537 GGAGCTAGAGATCGGATCGG 58.908 60.000 12.08 5.83 0.00 4.18
523 524 1.339247 GGAGCTAGAGATCGGATCGGA 60.339 57.143 12.08 5.34 0.00 4.55
524 525 2.639065 GAGCTAGAGATCGGATCGGAT 58.361 52.381 15.03 15.03 0.00 4.18
525 526 2.612212 GAGCTAGAGATCGGATCGGATC 59.388 54.545 27.36 27.36 42.52 3.36
533 534 2.476126 TCGGATCGGATCTCTACTCC 57.524 55.000 16.96 0.00 0.00 3.85
534 535 1.003349 TCGGATCGGATCTCTACTCCC 59.997 57.143 16.96 0.00 0.00 4.30
535 536 1.003812 CGGATCGGATCTCTACTCCCT 59.996 57.143 16.96 0.00 0.00 4.20
536 537 2.553466 CGGATCGGATCTCTACTCCCTT 60.553 54.545 16.96 0.00 0.00 3.95
537 538 2.823154 GGATCGGATCTCTACTCCCTTG 59.177 54.545 16.96 0.00 0.00 3.61
538 539 3.498841 GGATCGGATCTCTACTCCCTTGA 60.499 52.174 16.96 0.00 0.00 3.02
539 540 3.885976 TCGGATCTCTACTCCCTTGAT 57.114 47.619 0.00 0.00 0.00 2.57
540 541 3.491342 TCGGATCTCTACTCCCTTGATG 58.509 50.000 0.00 0.00 0.00 3.07
541 542 3.117474 TCGGATCTCTACTCCCTTGATGT 60.117 47.826 0.00 0.00 0.00 3.06
542 543 3.639094 CGGATCTCTACTCCCTTGATGTT 59.361 47.826 0.00 0.00 0.00 2.71
543 544 4.500545 CGGATCTCTACTCCCTTGATGTTG 60.501 50.000 0.00 0.00 0.00 3.33
544 545 3.895232 TCTCTACTCCCTTGATGTTGC 57.105 47.619 0.00 0.00 0.00 4.17
545 546 3.445008 TCTCTACTCCCTTGATGTTGCT 58.555 45.455 0.00 0.00 0.00 3.91
546 547 3.449018 TCTCTACTCCCTTGATGTTGCTC 59.551 47.826 0.00 0.00 0.00 4.26
547 548 2.166459 TCTACTCCCTTGATGTTGCTCG 59.834 50.000 0.00 0.00 0.00 5.03
548 549 0.687354 ACTCCCTTGATGTTGCTCGT 59.313 50.000 0.00 0.00 0.00 4.18
549 550 1.081892 CTCCCTTGATGTTGCTCGTG 58.918 55.000 0.00 0.00 0.00 4.35
550 551 0.684535 TCCCTTGATGTTGCTCGTGA 59.315 50.000 0.00 0.00 0.00 4.35
551 552 1.278985 TCCCTTGATGTTGCTCGTGAT 59.721 47.619 0.00 0.00 0.00 3.06
552 553 1.399440 CCCTTGATGTTGCTCGTGATG 59.601 52.381 0.00 0.00 0.00 3.07
553 554 1.399440 CCTTGATGTTGCTCGTGATGG 59.601 52.381 0.00 0.00 0.00 3.51
554 555 0.804364 TTGATGTTGCTCGTGATGGC 59.196 50.000 0.00 0.00 0.00 4.40
555 556 1.349627 GATGTTGCTCGTGATGGCG 59.650 57.895 0.00 0.00 0.00 5.69
556 557 1.361668 GATGTTGCTCGTGATGGCGT 61.362 55.000 0.00 0.00 0.00 5.68
557 558 0.955428 ATGTTGCTCGTGATGGCGTT 60.955 50.000 0.00 0.00 0.00 4.84
558 559 1.132640 GTTGCTCGTGATGGCGTTC 59.867 57.895 0.00 0.00 0.00 3.95
559 560 2.032634 TTGCTCGTGATGGCGTTCC 61.033 57.895 0.00 0.00 0.00 3.62
560 561 2.125512 GCTCGTGATGGCGTTCCT 60.126 61.111 0.00 0.00 0.00 3.36
561 562 1.741770 GCTCGTGATGGCGTTCCTT 60.742 57.895 0.00 0.00 0.00 3.36
562 563 1.970917 GCTCGTGATGGCGTTCCTTG 61.971 60.000 0.00 0.00 0.00 3.61
563 564 1.361668 CTCGTGATGGCGTTCCTTGG 61.362 60.000 0.00 0.00 0.00 3.61
564 565 2.398554 CGTGATGGCGTTCCTTGGG 61.399 63.158 0.00 0.00 0.00 4.12
565 566 1.303317 GTGATGGCGTTCCTTGGGT 60.303 57.895 0.00 0.00 0.00 4.51
566 567 0.893727 GTGATGGCGTTCCTTGGGTT 60.894 55.000 0.00 0.00 0.00 4.11
567 568 0.608035 TGATGGCGTTCCTTGGGTTC 60.608 55.000 0.00 0.00 0.00 3.62
568 569 1.644786 GATGGCGTTCCTTGGGTTCG 61.645 60.000 0.00 0.00 0.00 3.95
569 570 3.733960 GGCGTTCCTTGGGTTCGC 61.734 66.667 14.84 14.84 41.53 4.70
570 571 2.975799 GCGTTCCTTGGGTTCGCA 60.976 61.111 16.86 0.00 41.71 5.10
571 572 2.548295 GCGTTCCTTGGGTTCGCAA 61.548 57.895 16.86 2.61 41.71 4.85
572 573 1.574428 CGTTCCTTGGGTTCGCAAG 59.426 57.895 18.39 18.39 0.00 4.01
573 574 1.164041 CGTTCCTTGGGTTCGCAAGT 61.164 55.000 21.74 0.00 39.48 3.16
574 575 1.029681 GTTCCTTGGGTTCGCAAGTT 58.970 50.000 21.74 0.00 39.48 2.66
575 576 2.223745 GTTCCTTGGGTTCGCAAGTTA 58.776 47.619 21.74 11.27 39.48 2.24
576 577 2.619646 GTTCCTTGGGTTCGCAAGTTAA 59.380 45.455 21.74 15.11 39.48 2.01
577 578 2.223745 TCCTTGGGTTCGCAAGTTAAC 58.776 47.619 21.74 0.00 39.48 2.01
578 579 1.950909 CCTTGGGTTCGCAAGTTAACA 59.049 47.619 21.74 0.00 39.48 2.41
579 580 2.359531 CCTTGGGTTCGCAAGTTAACAA 59.640 45.455 21.74 0.00 39.48 2.83
580 581 3.368495 CTTGGGTTCGCAAGTTAACAAC 58.632 45.455 17.49 2.91 39.48 3.32
581 582 1.331138 TGGGTTCGCAAGTTAACAACG 59.669 47.619 8.61 8.36 36.23 4.10
582 583 1.334329 GGGTTCGCAAGTTAACAACGG 60.334 52.381 8.61 0.00 36.23 4.44
583 584 1.598601 GGTTCGCAAGTTAACAACGGA 59.401 47.619 8.61 0.00 36.23 4.69
584 585 2.224784 GGTTCGCAAGTTAACAACGGAT 59.775 45.455 8.61 0.00 36.23 4.18
585 586 3.304190 GGTTCGCAAGTTAACAACGGATT 60.304 43.478 8.61 0.00 36.23 3.01
586 587 3.799137 TCGCAAGTTAACAACGGATTC 57.201 42.857 8.61 0.00 36.23 2.52
592 593 6.398517 CGCAAGTTAACAACGGATTCATTTTC 60.399 38.462 8.61 0.00 36.23 2.29
613 614 9.736023 ATTTTCAATTTATAGATTCAGAACGCC 57.264 29.630 0.00 0.00 0.00 5.68
614 615 6.861065 TCAATTTATAGATTCAGAACGCCC 57.139 37.500 0.00 0.00 0.00 6.13
619 620 7.724305 TTTATAGATTCAGAACGCCCATAAC 57.276 36.000 0.00 0.00 0.00 1.89
622 623 3.197766 AGATTCAGAACGCCCATAACTGA 59.802 43.478 0.00 0.00 36.11 3.41
628 629 0.734942 ACGCCCATAACTGACGAACG 60.735 55.000 0.00 0.00 0.00 3.95
642 643 1.328439 CGAACGTTCGTCAGAGAAGG 58.672 55.000 35.92 9.94 45.09 3.46
645 646 0.314302 ACGTTCGTCAGAGAAGGTGG 59.686 55.000 4.57 0.00 44.40 4.61
673 684 4.338118 TGCCTGACAGTTTTAGTTGAAAGG 59.662 41.667 0.93 0.00 0.00 3.11
674 685 4.261614 GCCTGACAGTTTTAGTTGAAAGGG 60.262 45.833 0.93 0.00 0.00 3.95
675 686 5.130350 CCTGACAGTTTTAGTTGAAAGGGA 58.870 41.667 0.93 0.00 0.00 4.20
676 687 5.239525 CCTGACAGTTTTAGTTGAAAGGGAG 59.760 44.000 0.93 0.00 0.00 4.30
677 688 5.996644 TGACAGTTTTAGTTGAAAGGGAGA 58.003 37.500 0.00 0.00 0.00 3.71
678 689 6.601332 TGACAGTTTTAGTTGAAAGGGAGAT 58.399 36.000 0.00 0.00 0.00 2.75
679 690 6.486657 TGACAGTTTTAGTTGAAAGGGAGATG 59.513 38.462 0.00 0.00 0.00 2.90
680 691 5.770162 ACAGTTTTAGTTGAAAGGGAGATGG 59.230 40.000 0.00 0.00 0.00 3.51
681 692 5.183904 CAGTTTTAGTTGAAAGGGAGATGGG 59.816 44.000 0.00 0.00 0.00 4.00
682 693 5.074515 AGTTTTAGTTGAAAGGGAGATGGGA 59.925 40.000 0.00 0.00 0.00 4.37
683 694 4.844349 TTAGTTGAAAGGGAGATGGGAG 57.156 45.455 0.00 0.00 0.00 4.30
684 695 2.921221 AGTTGAAAGGGAGATGGGAGA 58.079 47.619 0.00 0.00 0.00 3.71
685 696 2.843113 AGTTGAAAGGGAGATGGGAGAG 59.157 50.000 0.00 0.00 0.00 3.20
686 697 1.885049 TGAAAGGGAGATGGGAGAGG 58.115 55.000 0.00 0.00 0.00 3.69
693 704 0.689080 GAGATGGGAGAGGTGGCAGA 60.689 60.000 0.00 0.00 0.00 4.26
705 716 2.027377 AGGTGGCAGACATCTCTTTGAG 60.027 50.000 0.00 0.00 34.81 3.02
710 721 3.932089 GGCAGACATCTCTTTGAGAAGAC 59.068 47.826 6.79 1.51 42.27 3.01
730 741 8.592155 AGAAGACAATTTTCGTTTAAAAACTGC 58.408 29.630 4.24 0.00 40.37 4.40
744 755 7.523293 TTAAAAACTGCCATCTTTGATCTCA 57.477 32.000 0.00 0.00 0.00 3.27
753 764 7.315142 TGCCATCTTTGATCTCATTTTACAAC 58.685 34.615 0.00 0.00 0.00 3.32
780 791 8.887036 AAAATTGGAAAGTGTAAAGATGGTTC 57.113 30.769 0.00 0.00 0.00 3.62
792 803 1.304282 ATGGTTCGCTTGCCATCCT 59.696 52.632 0.00 0.00 41.24 3.24
797 808 0.901827 TTCGCTTGCCATCCTCTACA 59.098 50.000 0.00 0.00 0.00 2.74
821 860 5.808540 AGCAAACGTTCGTCAGCTATTATTA 59.191 36.000 17.79 0.00 0.00 0.98
822 861 5.894807 GCAAACGTTCGTCAGCTATTATTAC 59.105 40.000 0.00 0.00 0.00 1.89
823 862 5.861491 AACGTTCGTCAGCTATTATTACG 57.139 39.130 0.00 0.00 34.99 3.18
824 863 4.285292 ACGTTCGTCAGCTATTATTACGG 58.715 43.478 9.99 0.00 34.47 4.02
825 864 4.201950 ACGTTCGTCAGCTATTATTACGGT 60.202 41.667 9.99 0.00 34.47 4.83
826 865 5.007626 ACGTTCGTCAGCTATTATTACGGTA 59.992 40.000 9.99 0.00 34.47 4.02
827 866 5.562998 CGTTCGTCAGCTATTATTACGGTAG 59.437 44.000 0.00 0.00 34.47 3.18
828 867 6.564686 CGTTCGTCAGCTATTATTACGGTAGA 60.565 42.308 0.00 0.00 34.47 2.59
829 868 7.303998 GTTCGTCAGCTATTATTACGGTAGAT 58.696 38.462 0.00 0.00 34.47 1.98
830 869 7.069852 TCGTCAGCTATTATTACGGTAGATC 57.930 40.000 0.00 0.00 34.47 2.75
831 870 6.877855 TCGTCAGCTATTATTACGGTAGATCT 59.122 38.462 0.00 0.00 34.47 2.75
832 871 6.962116 CGTCAGCTATTATTACGGTAGATCTG 59.038 42.308 5.18 0.00 0.00 2.90
833 872 6.748198 GTCAGCTATTATTACGGTAGATCTGC 59.252 42.308 5.18 3.29 0.00 4.26
834 873 5.739630 CAGCTATTATTACGGTAGATCTGCG 59.260 44.000 5.18 3.37 0.00 5.18
845 884 3.001736 GGTAGATCTGCGAAAGACATTGC 59.998 47.826 5.18 0.00 37.88 3.56
852 891 1.001378 GCGAAAGACATTGCCACTGTT 60.001 47.619 0.00 0.00 0.00 3.16
854 893 2.350772 CGAAAGACATTGCCACTGTTCC 60.351 50.000 0.00 0.00 0.00 3.62
856 895 2.363306 AGACATTGCCACTGTTCCAA 57.637 45.000 0.00 0.00 0.00 3.53
858 897 3.030291 AGACATTGCCACTGTTCCAAAA 58.970 40.909 0.00 0.00 0.00 2.44
861 900 4.379652 ACATTGCCACTGTTCCAAAAATC 58.620 39.130 0.00 0.00 0.00 2.17
862 901 2.791383 TGCCACTGTTCCAAAAATCG 57.209 45.000 0.00 0.00 0.00 3.34
863 902 1.269517 TGCCACTGTTCCAAAAATCGC 60.270 47.619 0.00 0.00 0.00 4.58
864 903 1.000274 GCCACTGTTCCAAAAATCGCT 60.000 47.619 0.00 0.00 0.00 4.93
865 904 2.922335 GCCACTGTTCCAAAAATCGCTC 60.922 50.000 0.00 0.00 0.00 5.03
868 907 3.916172 CACTGTTCCAAAAATCGCTCATG 59.084 43.478 0.00 0.00 0.00 3.07
869 908 3.820467 ACTGTTCCAAAAATCGCTCATGA 59.180 39.130 0.00 0.00 0.00 3.07
870 909 4.083110 ACTGTTCCAAAAATCGCTCATGAG 60.083 41.667 18.84 18.84 0.00 2.90
871 910 3.820467 TGTTCCAAAAATCGCTCATGAGT 59.180 39.130 23.38 1.24 0.00 3.41
872 911 4.083324 TGTTCCAAAAATCGCTCATGAGTC 60.083 41.667 23.38 14.51 0.00 3.36
873 912 3.673902 TCCAAAAATCGCTCATGAGTCA 58.326 40.909 23.38 11.02 0.00 3.41
874 913 3.436704 TCCAAAAATCGCTCATGAGTCAC 59.563 43.478 23.38 6.67 0.00 3.67
875 914 3.426695 CCAAAAATCGCTCATGAGTCACC 60.427 47.826 23.38 6.31 0.00 4.02
876 915 2.029838 AAATCGCTCATGAGTCACCC 57.970 50.000 23.38 5.94 0.00 4.61
877 916 0.179100 AATCGCTCATGAGTCACCCG 60.179 55.000 23.38 17.18 0.00 5.28
878 917 2.635229 ATCGCTCATGAGTCACCCGC 62.635 60.000 23.38 7.64 0.00 6.13
879 918 2.265739 GCTCATGAGTCACCCGCA 59.734 61.111 23.38 0.00 0.00 5.69
880 919 1.375908 GCTCATGAGTCACCCGCAA 60.376 57.895 23.38 0.00 0.00 4.85
881 920 0.745845 GCTCATGAGTCACCCGCAAT 60.746 55.000 23.38 0.00 0.00 3.56
882 921 1.742761 CTCATGAGTCACCCGCAATT 58.257 50.000 14.95 0.00 0.00 2.32
883 922 2.086869 CTCATGAGTCACCCGCAATTT 58.913 47.619 14.95 0.00 0.00 1.82
884 923 2.489329 CTCATGAGTCACCCGCAATTTT 59.511 45.455 14.95 0.00 0.00 1.82
885 924 2.890311 TCATGAGTCACCCGCAATTTTT 59.110 40.909 0.00 0.00 0.00 1.94
1112 1157 2.231380 GCCTTTCCCCTCCTCCACA 61.231 63.158 0.00 0.00 0.00 4.17
1242 1287 3.423253 GCCTCTTTTTACGAAACTCGCTC 60.423 47.826 0.00 0.00 45.12 5.03
1255 1300 2.510238 CGCTCCAGCTTTCCTCGG 60.510 66.667 0.00 0.00 39.32 4.63
1354 1399 2.606725 CGAGTTCTACGACGAGGTATGT 59.393 50.000 0.00 0.00 0.00 2.29
1356 1401 3.603532 AGTTCTACGACGAGGTATGTCA 58.396 45.455 0.00 0.00 36.11 3.58
1423 1468 0.782981 CATGAGCTGCTCTTATCGCG 59.217 55.000 28.04 0.00 0.00 5.87
1449 1494 0.026285 GCGCGCACTTGTGGTTATAG 59.974 55.000 29.10 0.00 0.00 1.31
1530 1577 3.893326 ATATTGACCTTTTGCTTGGGC 57.107 42.857 0.00 0.00 39.26 5.36
1543 1590 7.418942 CCTTTTGCTTGGGCCATTAGTTATATT 60.419 37.037 7.26 0.00 37.74 1.28
1594 1641 2.241941 TCCTGCAATTAGCCAATCCTGA 59.758 45.455 0.00 0.00 44.83 3.86
1635 1684 5.545093 GGTCCTGGACTAGCACATCTGTG 62.545 56.522 25.01 5.95 39.57 3.66
1695 1744 9.341899 GCACAATAATAGTTTTAACAAGTCCTG 57.658 33.333 0.00 0.00 0.00 3.86
1703 1752 5.241728 AGTTTTAACAAGTCCTGCAATCTCC 59.758 40.000 0.00 0.00 0.00 3.71
1756 1805 5.818678 AATCGGCATCATTAGGGTACTAA 57.181 39.130 0.00 0.00 42.95 2.24
1884 1934 1.753649 GCCTACTCTGAGCTGACATGA 59.246 52.381 4.19 0.00 0.00 3.07
1911 1961 5.610398 TGTGACATGCTATTTGTATCGGAT 58.390 37.500 0.00 0.00 0.00 4.18
1959 2009 5.635280 AGTGATGAGTTGAACACACGAATAG 59.365 40.000 0.00 0.00 35.97 1.73
2003 2053 3.990092 ACTGTCGTGAGCAATTAACTGA 58.010 40.909 0.00 0.00 0.00 3.41
2073 2123 7.087639 TCGCTTACCTTTGAAAATTGGTATTG 58.912 34.615 0.00 0.00 35.96 1.90
2138 2188 8.085909 TGATTCACATATTCAATCATCATTGCC 58.914 33.333 0.00 0.00 39.56 4.52
2211 2261 2.383601 GGGATAGGTGGGTGGGTGG 61.384 68.421 0.00 0.00 0.00 4.61
2339 2389 2.703536 TCTGTACTTCCACTTGCAGGAA 59.296 45.455 1.40 4.10 42.62 3.36
2764 2814 6.438425 AGTCTGGAAGGAAAATGCATTTACAT 59.562 34.615 24.35 13.54 33.95 2.29
2828 2878 4.398044 GTCTGGACTTTTGGTCAAGTTCAA 59.602 41.667 0.00 0.00 41.02 2.69
3030 3080 6.973474 TCGAACACCGTTAAAACAAAATCATT 59.027 30.769 0.00 0.00 39.75 2.57
3550 3610 4.981674 TGCACTAAAGCTGCAACAATTAAC 59.018 37.500 1.02 0.00 41.70 2.01
3758 3818 8.577048 TTTTAGTATCTCATATACTCCCTCCG 57.423 38.462 1.10 0.00 36.38 4.63
3759 3819 5.782677 AGTATCTCATATACTCCCTCCGT 57.217 43.478 0.00 0.00 29.47 4.69
3760 3820 5.747342 AGTATCTCATATACTCCCTCCGTC 58.253 45.833 0.00 0.00 29.47 4.79
3761 3821 4.938575 ATCTCATATACTCCCTCCGTCT 57.061 45.455 0.00 0.00 0.00 4.18
3762 3822 6.673097 AGTATCTCATATACTCCCTCCGTCTA 59.327 42.308 0.00 0.00 29.47 2.59
3763 3823 5.423704 TCTCATATACTCCCTCCGTCTAG 57.576 47.826 0.00 0.00 0.00 2.43
3764 3824 4.225492 TCTCATATACTCCCTCCGTCTAGG 59.775 50.000 0.00 0.00 42.97 3.02
3765 3825 3.915073 TCATATACTCCCTCCGTCTAGGT 59.085 47.826 0.00 0.00 41.99 3.08
3766 3826 2.660670 ATACTCCCTCCGTCTAGGTG 57.339 55.000 0.00 0.00 41.99 4.00
3767 3827 1.588239 TACTCCCTCCGTCTAGGTGA 58.412 55.000 0.00 0.00 41.99 4.02
3768 3828 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51
3769 3829 0.256464 CTCCCTCCGTCTAGGTGAGT 59.744 60.000 0.00 0.00 41.99 3.41
3770 3830 1.489649 CTCCCTCCGTCTAGGTGAGTA 59.510 57.143 0.00 0.00 41.99 2.59
3771 3831 1.918262 TCCCTCCGTCTAGGTGAGTAA 59.082 52.381 0.00 0.00 41.99 2.24
3772 3832 2.092538 TCCCTCCGTCTAGGTGAGTAAG 60.093 54.545 0.00 0.00 41.99 2.34
3773 3833 2.356947 CCCTCCGTCTAGGTGAGTAAGT 60.357 54.545 0.00 0.00 41.99 2.24
3774 3834 2.944349 CCTCCGTCTAGGTGAGTAAGTC 59.056 54.545 0.00 0.00 41.99 3.01
3775 3835 3.607741 CTCCGTCTAGGTGAGTAAGTCA 58.392 50.000 0.00 0.00 41.99 3.41
3786 3846 3.507411 TGAGTAAGTCACCTTAGGCTGT 58.493 45.455 0.00 0.00 33.87 4.40
3787 3847 3.258372 TGAGTAAGTCACCTTAGGCTGTG 59.742 47.826 0.00 0.00 33.87 3.66
3788 3848 2.028020 AGTAAGTCACCTTAGGCTGTGC 60.028 50.000 0.00 0.00 33.87 4.57
3789 3849 0.764890 AAGTCACCTTAGGCTGTGCA 59.235 50.000 0.00 0.00 32.51 4.57
3790 3850 0.035458 AGTCACCTTAGGCTGTGCAC 59.965 55.000 10.75 10.75 32.51 4.57
3791 3851 0.955919 GTCACCTTAGGCTGTGCACC 60.956 60.000 15.69 0.00 32.51 5.01
3792 3852 2.034879 CACCTTAGGCTGTGCACCG 61.035 63.158 15.69 9.51 0.00 4.94
3793 3853 2.347490 CCTTAGGCTGTGCACCGT 59.653 61.111 15.69 3.89 0.00 4.83
3794 3854 2.034879 CCTTAGGCTGTGCACCGTG 61.035 63.158 15.69 5.80 0.00 4.94
3795 3855 1.005037 CTTAGGCTGTGCACCGTGA 60.005 57.895 15.69 0.00 0.00 4.35
3796 3856 1.291877 CTTAGGCTGTGCACCGTGAC 61.292 60.000 15.69 6.87 0.00 3.67
3797 3857 2.725203 TTAGGCTGTGCACCGTGACC 62.725 60.000 15.69 8.42 0.00 4.02
3798 3858 4.927782 GGCTGTGCACCGTGACCA 62.928 66.667 15.69 0.00 0.00 4.02
3799 3859 2.899838 GCTGTGCACCGTGACCAA 60.900 61.111 15.69 0.00 0.00 3.67
3800 3860 2.896801 GCTGTGCACCGTGACCAAG 61.897 63.158 15.69 3.09 0.00 3.61
3801 3861 2.203139 TGTGCACCGTGACCAAGG 60.203 61.111 15.69 0.44 35.99 3.61
3802 3862 2.110213 GTGCACCGTGACCAAGGA 59.890 61.111 5.22 0.00 33.97 3.36
3803 3863 1.961277 GTGCACCGTGACCAAGGAG 60.961 63.158 5.22 2.30 33.97 3.69
3804 3864 2.358737 GCACCGTGACCAAGGAGG 60.359 66.667 8.91 2.33 45.67 4.30
3805 3865 2.879233 GCACCGTGACCAAGGAGGA 61.879 63.158 8.91 0.00 41.22 3.71
3806 3866 1.293498 CACCGTGACCAAGGAGGAG 59.707 63.158 8.91 0.00 41.22 3.69
3807 3867 1.913762 ACCGTGACCAAGGAGGAGG 60.914 63.158 8.91 0.00 41.22 4.30
3808 3868 2.660064 CCGTGACCAAGGAGGAGGG 61.660 68.421 0.00 0.00 41.22 4.30
3809 3869 2.660064 CGTGACCAAGGAGGAGGGG 61.660 68.421 0.00 0.00 41.22 4.79
3810 3870 1.229529 GTGACCAAGGAGGAGGGGA 60.230 63.158 0.00 0.00 41.22 4.81
3811 3871 0.840722 GTGACCAAGGAGGAGGGGAA 60.841 60.000 0.00 0.00 41.22 3.97
3812 3872 0.104144 TGACCAAGGAGGAGGGGAAA 60.104 55.000 0.00 0.00 41.22 3.13
3813 3873 1.073098 GACCAAGGAGGAGGGGAAAA 58.927 55.000 0.00 0.00 41.22 2.29
3814 3874 0.778083 ACCAAGGAGGAGGGGAAAAC 59.222 55.000 0.00 0.00 41.22 2.43
3815 3875 0.322546 CCAAGGAGGAGGGGAAAACG 60.323 60.000 0.00 0.00 41.22 3.60
3816 3876 0.690762 CAAGGAGGAGGGGAAAACGA 59.309 55.000 0.00 0.00 0.00 3.85
3817 3877 0.984995 AAGGAGGAGGGGAAAACGAG 59.015 55.000 0.00 0.00 0.00 4.18
3818 3878 0.116541 AGGAGGAGGGGAAAACGAGA 59.883 55.000 0.00 0.00 0.00 4.04
3819 3879 0.981943 GGAGGAGGGGAAAACGAGAA 59.018 55.000 0.00 0.00 0.00 2.87
3820 3880 1.350019 GGAGGAGGGGAAAACGAGAAA 59.650 52.381 0.00 0.00 0.00 2.52
3821 3881 2.424557 GAGGAGGGGAAAACGAGAAAC 58.575 52.381 0.00 0.00 0.00 2.78
3838 3898 7.775729 CGAGAAACGTTAATGTTTATTTGCT 57.224 32.000 22.54 15.72 41.89 3.91
3839 3899 8.868744 CGAGAAACGTTAATGTTTATTTGCTA 57.131 30.769 22.54 0.00 41.89 3.49
3840 3900 9.320406 CGAGAAACGTTAATGTTTATTTGCTAA 57.680 29.630 22.54 0.00 41.89 3.09
3861 3921 9.628746 TGCTAATTAATAGTATTGCATGCAATG 57.371 29.630 42.30 27.00 39.65 2.82
3862 3922 9.844790 GCTAATTAATAGTATTGCATGCAATGA 57.155 29.630 42.30 30.79 39.28 2.57
3874 3934 3.855689 ATGCAATGAACTAACCACTGC 57.144 42.857 0.00 0.00 0.00 4.40
3875 3935 2.580962 TGCAATGAACTAACCACTGCA 58.419 42.857 0.00 0.00 36.06 4.41
3876 3936 3.156293 TGCAATGAACTAACCACTGCAT 58.844 40.909 0.00 0.00 33.65 3.96
3877 3937 3.057386 TGCAATGAACTAACCACTGCATG 60.057 43.478 0.00 0.00 33.65 4.06
3878 3938 3.057315 GCAATGAACTAACCACTGCATGT 60.057 43.478 0.00 0.00 0.00 3.21
3879 3939 4.726416 CAATGAACTAACCACTGCATGTC 58.274 43.478 0.00 0.00 0.00 3.06
3880 3940 2.412870 TGAACTAACCACTGCATGTCG 58.587 47.619 0.00 0.00 0.00 4.35
3881 3941 2.224185 TGAACTAACCACTGCATGTCGT 60.224 45.455 0.00 0.00 0.00 4.34
3882 3942 1.795768 ACTAACCACTGCATGTCGTG 58.204 50.000 8.87 8.87 0.00 4.35
3883 3943 1.070134 ACTAACCACTGCATGTCGTGT 59.930 47.619 13.12 2.00 0.00 4.49
3884 3944 2.143122 CTAACCACTGCATGTCGTGTT 58.857 47.619 13.12 10.39 0.00 3.32
3885 3945 1.388547 AACCACTGCATGTCGTGTTT 58.611 45.000 13.12 5.09 0.00 2.83
3886 3946 0.662619 ACCACTGCATGTCGTGTTTG 59.337 50.000 13.12 3.87 0.00 2.93
3887 3947 0.943673 CCACTGCATGTCGTGTTTGA 59.056 50.000 13.12 0.00 0.00 2.69
3888 3948 1.536766 CCACTGCATGTCGTGTTTGAT 59.463 47.619 13.12 0.00 0.00 2.57
3889 3949 2.741517 CCACTGCATGTCGTGTTTGATA 59.258 45.455 13.12 0.00 0.00 2.15
3890 3950 3.181517 CCACTGCATGTCGTGTTTGATAG 60.182 47.826 13.12 0.00 0.00 2.08
3891 3951 3.433274 CACTGCATGTCGTGTTTGATAGT 59.567 43.478 7.95 0.00 0.00 2.12
3892 3952 3.679980 ACTGCATGTCGTGTTTGATAGTC 59.320 43.478 0.00 0.00 0.00 2.59
3893 3953 3.925379 TGCATGTCGTGTTTGATAGTCT 58.075 40.909 0.00 0.00 0.00 3.24
3894 3954 3.926527 TGCATGTCGTGTTTGATAGTCTC 59.073 43.478 0.00 0.00 0.00 3.36
3895 3955 3.926527 GCATGTCGTGTTTGATAGTCTCA 59.073 43.478 0.00 0.00 0.00 3.27
3896 3956 4.388773 GCATGTCGTGTTTGATAGTCTCAA 59.611 41.667 0.00 0.00 42.15 3.02
3897 3957 5.445142 GCATGTCGTGTTTGATAGTCTCAAG 60.445 44.000 0.00 0.00 44.48 3.02
3898 3958 5.196341 TGTCGTGTTTGATAGTCTCAAGT 57.804 39.130 0.00 0.00 44.48 3.16
3899 3959 5.220381 TGTCGTGTTTGATAGTCTCAAGTC 58.780 41.667 0.00 0.00 44.48 3.01
3900 3960 5.220381 GTCGTGTTTGATAGTCTCAAGTCA 58.780 41.667 0.00 0.00 44.48 3.41
3901 3961 5.864474 GTCGTGTTTGATAGTCTCAAGTCAT 59.136 40.000 0.00 0.00 44.48 3.06
3902 3962 6.366332 GTCGTGTTTGATAGTCTCAAGTCATT 59.634 38.462 0.00 0.00 44.48 2.57
3903 3963 7.541091 GTCGTGTTTGATAGTCTCAAGTCATTA 59.459 37.037 0.00 0.00 44.48 1.90
3904 3964 8.085909 TCGTGTTTGATAGTCTCAAGTCATTAA 58.914 33.333 0.00 0.00 44.48 1.40
3905 3965 8.708742 CGTGTTTGATAGTCTCAAGTCATTAAA 58.291 33.333 0.00 0.00 44.48 1.52
3908 3968 9.548208 GTTTGATAGTCTCAAGTCATTAAAAGC 57.452 33.333 0.00 0.00 44.48 3.51
3909 3969 8.846943 TTGATAGTCTCAAGTCATTAAAAGCA 57.153 30.769 0.00 0.00 38.97 3.91
3910 3970 9.453572 TTGATAGTCTCAAGTCATTAAAAGCAT 57.546 29.630 0.00 0.00 38.97 3.79
3911 3971 8.886719 TGATAGTCTCAAGTCATTAAAAGCATG 58.113 33.333 0.00 0.00 0.00 4.06
3912 3972 5.947443 AGTCTCAAGTCATTAAAAGCATGC 58.053 37.500 10.51 10.51 0.00 4.06
3913 3973 5.474532 AGTCTCAAGTCATTAAAAGCATGCA 59.525 36.000 21.98 0.00 0.00 3.96
3914 3974 5.570589 GTCTCAAGTCATTAAAAGCATGCAC 59.429 40.000 21.98 6.43 0.00 4.57
3915 3975 5.241285 TCTCAAGTCATTAAAAGCATGCACA 59.759 36.000 21.98 0.00 0.00 4.57
3916 3976 5.221880 TCAAGTCATTAAAAGCATGCACAC 58.778 37.500 21.98 4.04 0.00 3.82
3917 3977 5.009911 TCAAGTCATTAAAAGCATGCACACT 59.990 36.000 21.98 6.28 0.00 3.55
3918 3978 5.051891 AGTCATTAAAAGCATGCACACTC 57.948 39.130 21.98 1.10 0.00 3.51
3919 3979 4.763793 AGTCATTAAAAGCATGCACACTCT 59.236 37.500 21.98 3.43 0.00 3.24
3920 3980 5.242393 AGTCATTAAAAGCATGCACACTCTT 59.758 36.000 21.98 0.36 0.00 2.85
3921 3981 5.922544 GTCATTAAAAGCATGCACACTCTTT 59.077 36.000 21.98 7.52 0.00 2.52
3922 3982 7.040478 AGTCATTAAAAGCATGCACACTCTTTA 60.040 33.333 21.98 10.06 0.00 1.85
3923 3983 7.756722 GTCATTAAAAGCATGCACACTCTTTAT 59.243 33.333 21.98 0.00 0.00 1.40
3924 3984 7.970061 TCATTAAAAGCATGCACACTCTTTATC 59.030 33.333 21.98 0.00 0.00 1.75
3925 3985 5.972107 AAAAGCATGCACACTCTTTATCT 57.028 34.783 21.98 0.00 0.00 1.98
3926 3986 5.557891 AAAGCATGCACACTCTTTATCTC 57.442 39.130 21.98 0.00 0.00 2.75
3927 3987 4.484537 AGCATGCACACTCTTTATCTCT 57.515 40.909 21.98 0.00 0.00 3.10
3928 3988 4.841422 AGCATGCACACTCTTTATCTCTT 58.159 39.130 21.98 0.00 0.00 2.85
3929 3989 5.982356 AGCATGCACACTCTTTATCTCTTA 58.018 37.500 21.98 0.00 0.00 2.10
3930 3990 6.590068 AGCATGCACACTCTTTATCTCTTAT 58.410 36.000 21.98 0.00 0.00 1.73
3931 3991 7.052873 AGCATGCACACTCTTTATCTCTTATT 58.947 34.615 21.98 0.00 0.00 1.40
3932 3992 7.012138 AGCATGCACACTCTTTATCTCTTATTG 59.988 37.037 21.98 0.00 0.00 1.90
3933 3993 7.637229 CATGCACACTCTTTATCTCTTATTGG 58.363 38.462 0.00 0.00 0.00 3.16
3934 3994 6.711277 TGCACACTCTTTATCTCTTATTGGT 58.289 36.000 0.00 0.00 0.00 3.67
3935 3995 7.168219 TGCACACTCTTTATCTCTTATTGGTT 58.832 34.615 0.00 0.00 0.00 3.67
3936 3996 7.119699 TGCACACTCTTTATCTCTTATTGGTTG 59.880 37.037 0.00 0.00 0.00 3.77
3937 3997 7.334421 GCACACTCTTTATCTCTTATTGGTTGA 59.666 37.037 0.00 0.00 0.00 3.18
3938 3998 9.388506 CACACTCTTTATCTCTTATTGGTTGAT 57.611 33.333 0.00 0.00 0.00 2.57
3949 4009 9.958180 TCTCTTATTGGTTGATATGTCAAGAAA 57.042 29.630 4.98 3.84 44.58 2.52
3950 4010 9.994432 CTCTTATTGGTTGATATGTCAAGAAAC 57.006 33.333 4.98 0.00 44.58 2.78
3951 4011 9.513906 TCTTATTGGTTGATATGTCAAGAAACA 57.486 29.630 4.98 0.63 44.58 2.83
3954 4014 7.815840 TTGGTTGATATGTCAAGAAACAAGA 57.184 32.000 4.98 0.00 44.58 3.02
3955 4015 7.815840 TGGTTGATATGTCAAGAAACAAGAA 57.184 32.000 4.98 0.00 44.58 2.52
3956 4016 8.231692 TGGTTGATATGTCAAGAAACAAGAAA 57.768 30.769 4.98 0.00 44.58 2.52
3957 4017 8.134895 TGGTTGATATGTCAAGAAACAAGAAAC 58.865 33.333 4.98 0.00 44.58 2.78
3958 4018 7.323656 GGTTGATATGTCAAGAAACAAGAAACG 59.676 37.037 4.98 0.00 44.58 3.60
3959 4019 7.722795 TGATATGTCAAGAAACAAGAAACGA 57.277 32.000 0.00 0.00 31.81 3.85
3960 4020 7.796838 TGATATGTCAAGAAACAAGAAACGAG 58.203 34.615 0.00 0.00 31.81 4.18
3961 4021 4.875544 TGTCAAGAAACAAGAAACGAGG 57.124 40.909 0.00 0.00 0.00 4.63
3962 4022 4.258543 TGTCAAGAAACAAGAAACGAGGT 58.741 39.130 0.00 0.00 0.00 3.85
3963 4023 5.421277 TGTCAAGAAACAAGAAACGAGGTA 58.579 37.500 0.00 0.00 0.00 3.08
3964 4024 5.522460 TGTCAAGAAACAAGAAACGAGGTAG 59.478 40.000 0.00 0.00 0.00 3.18
3965 4025 5.751990 GTCAAGAAACAAGAAACGAGGTAGA 59.248 40.000 0.00 0.00 0.00 2.59
3966 4026 6.257193 GTCAAGAAACAAGAAACGAGGTAGAA 59.743 38.462 0.00 0.00 0.00 2.10
3967 4027 6.479001 TCAAGAAACAAGAAACGAGGTAGAAG 59.521 38.462 0.00 0.00 0.00 2.85
3968 4028 5.915175 AGAAACAAGAAACGAGGTAGAAGT 58.085 37.500 0.00 0.00 0.00 3.01
3969 4029 6.346896 AGAAACAAGAAACGAGGTAGAAGTT 58.653 36.000 0.00 0.00 0.00 2.66
3970 4030 7.495055 AGAAACAAGAAACGAGGTAGAAGTTA 58.505 34.615 0.00 0.00 0.00 2.24
3971 4031 7.983484 AGAAACAAGAAACGAGGTAGAAGTTAA 59.017 33.333 0.00 0.00 0.00 2.01
3972 4032 8.672823 AAACAAGAAACGAGGTAGAAGTTAAT 57.327 30.769 0.00 0.00 0.00 1.40
3973 4033 7.653767 ACAAGAAACGAGGTAGAAGTTAATG 57.346 36.000 0.00 0.00 0.00 1.90
3974 4034 6.147328 ACAAGAAACGAGGTAGAAGTTAATGC 59.853 38.462 0.00 0.00 0.00 3.56
3975 4035 5.790593 AGAAACGAGGTAGAAGTTAATGCA 58.209 37.500 0.00 0.00 0.00 3.96
3976 4036 5.638234 AGAAACGAGGTAGAAGTTAATGCAC 59.362 40.000 0.00 0.00 0.00 4.57
3977 4037 3.858247 ACGAGGTAGAAGTTAATGCACC 58.142 45.455 0.00 0.00 0.00 5.01
3978 4038 3.259876 ACGAGGTAGAAGTTAATGCACCA 59.740 43.478 0.00 0.00 0.00 4.17
3979 4039 3.617263 CGAGGTAGAAGTTAATGCACCAC 59.383 47.826 0.00 0.00 0.00 4.16
3980 4040 3.596214 AGGTAGAAGTTAATGCACCACG 58.404 45.455 0.00 0.00 0.00 4.94
3981 4041 2.095372 GGTAGAAGTTAATGCACCACGC 59.905 50.000 0.00 0.00 42.89 5.34
3982 4042 1.165270 AGAAGTTAATGCACCACGCC 58.835 50.000 0.00 0.00 41.33 5.68
3983 4043 1.165270 GAAGTTAATGCACCACGCCT 58.835 50.000 0.00 0.00 41.33 5.52
3984 4044 2.027561 AGAAGTTAATGCACCACGCCTA 60.028 45.455 0.00 0.00 41.33 3.93
3985 4045 2.483014 AGTTAATGCACCACGCCTAA 57.517 45.000 0.00 0.00 41.33 2.69
3986 4046 2.356135 AGTTAATGCACCACGCCTAAG 58.644 47.619 0.00 0.00 41.33 2.18
3987 4047 2.081462 GTTAATGCACCACGCCTAAGT 58.919 47.619 0.00 0.00 41.33 2.24
3988 4048 1.732941 TAATGCACCACGCCTAAGTG 58.267 50.000 0.00 0.00 41.33 3.16
3989 4049 0.250727 AATGCACCACGCCTAAGTGT 60.251 50.000 0.00 0.00 41.33 3.55
3990 4050 0.250727 ATGCACCACGCCTAAGTGTT 60.251 50.000 0.00 0.00 41.33 3.32
3991 4051 0.464735 TGCACCACGCCTAAGTGTTT 60.465 50.000 0.00 0.00 41.33 2.83
3992 4052 0.666374 GCACCACGCCTAAGTGTTTT 59.334 50.000 0.00 0.00 40.33 2.43
3993 4053 1.599419 GCACCACGCCTAAGTGTTTTG 60.599 52.381 0.00 0.00 40.33 2.44
3994 4054 1.001815 CACCACGCCTAAGTGTTTTGG 60.002 52.381 0.00 0.00 40.33 3.28
3995 4055 0.596082 CCACGCCTAAGTGTTTTGGG 59.404 55.000 0.00 0.00 40.33 4.12
3996 4056 1.600023 CACGCCTAAGTGTTTTGGGA 58.400 50.000 0.00 0.00 37.35 4.37
3997 4057 2.159382 CACGCCTAAGTGTTTTGGGAT 58.841 47.619 0.00 0.00 37.35 3.85
3998 4058 2.556622 CACGCCTAAGTGTTTTGGGATT 59.443 45.455 0.00 0.00 37.35 3.01
3999 4059 3.754323 CACGCCTAAGTGTTTTGGGATTA 59.246 43.478 0.00 0.00 37.35 1.75
4000 4060 4.398044 CACGCCTAAGTGTTTTGGGATTAT 59.602 41.667 0.00 0.00 37.35 1.28
4001 4061 5.014202 ACGCCTAAGTGTTTTGGGATTATT 58.986 37.500 0.00 0.00 30.76 1.40
4002 4062 5.479027 ACGCCTAAGTGTTTTGGGATTATTT 59.521 36.000 0.00 0.00 30.76 1.40
4003 4063 5.804979 CGCCTAAGTGTTTTGGGATTATTTG 59.195 40.000 0.00 0.00 30.91 2.32
4004 4064 6.106003 GCCTAAGTGTTTTGGGATTATTTGG 58.894 40.000 0.00 0.00 30.91 3.28
4005 4065 6.295632 GCCTAAGTGTTTTGGGATTATTTGGT 60.296 38.462 0.00 0.00 30.91 3.67
4006 4066 7.676004 CCTAAGTGTTTTGGGATTATTTGGTT 58.324 34.615 0.00 0.00 0.00 3.67
4007 4067 8.154203 CCTAAGTGTTTTGGGATTATTTGGTTT 58.846 33.333 0.00 0.00 0.00 3.27
4008 4068 9.554395 CTAAGTGTTTTGGGATTATTTGGTTTT 57.446 29.630 0.00 0.00 0.00 2.43
4009 4069 8.445275 AAGTGTTTTGGGATTATTTGGTTTTC 57.555 30.769 0.00 0.00 0.00 2.29
4010 4070 7.569240 AGTGTTTTGGGATTATTTGGTTTTCA 58.431 30.769 0.00 0.00 0.00 2.69
4011 4071 8.217111 AGTGTTTTGGGATTATTTGGTTTTCAT 58.783 29.630 0.00 0.00 0.00 2.57
4012 4072 9.495572 GTGTTTTGGGATTATTTGGTTTTCATA 57.504 29.630 0.00 0.00 0.00 2.15
4018 4078 9.486123 TGGGATTATTTGGTTTTCATAAGATGA 57.514 29.630 0.00 0.00 37.55 2.92
4019 4079 9.750125 GGGATTATTTGGTTTTCATAAGATGAC 57.250 33.333 0.00 0.00 39.39 3.06
4026 4086 8.684386 TTGGTTTTCATAAGATGACTTACACA 57.316 30.769 0.00 0.00 40.71 3.72
4027 4087 8.094798 TGGTTTTCATAAGATGACTTACACAC 57.905 34.615 0.00 0.00 40.71 3.82
4028 4088 7.174253 TGGTTTTCATAAGATGACTTACACACC 59.826 37.037 0.00 0.00 40.71 4.16
4029 4089 7.390718 GGTTTTCATAAGATGACTTACACACCT 59.609 37.037 0.00 0.00 40.71 4.00
4030 4090 9.431887 GTTTTCATAAGATGACTTACACACCTA 57.568 33.333 0.00 0.00 40.71 3.08
4033 4093 8.997621 TCATAAGATGACTTACACACCTAAAC 57.002 34.615 0.00 0.00 40.71 2.01
4034 4094 7.758076 TCATAAGATGACTTACACACCTAAACG 59.242 37.037 0.00 0.00 40.71 3.60
4035 4095 4.817517 AGATGACTTACACACCTAAACGG 58.182 43.478 0.00 0.00 39.35 4.44
4036 4096 4.525487 AGATGACTTACACACCTAAACGGA 59.475 41.667 0.00 0.00 36.31 4.69
4037 4097 4.247267 TGACTTACACACCTAAACGGAG 57.753 45.455 0.00 0.00 36.31 4.63
4038 4098 3.006110 TGACTTACACACCTAAACGGAGG 59.994 47.826 0.00 0.00 42.89 4.30
4039 4099 2.301009 ACTTACACACCTAAACGGAGGG 59.699 50.000 5.42 0.00 41.36 4.30
4040 4100 2.307496 TACACACCTAAACGGAGGGA 57.693 50.000 5.42 0.00 41.36 4.20
4041 4101 0.974383 ACACACCTAAACGGAGGGAG 59.026 55.000 5.42 0.78 41.36 4.30
4042 4102 0.974383 CACACCTAAACGGAGGGAGT 59.026 55.000 5.42 1.31 41.36 3.85
4043 4103 2.173519 CACACCTAAACGGAGGGAGTA 58.826 52.381 5.42 0.00 41.36 2.59
4050 4110 5.128335 ACCTAAACGGAGGGAGTATAGTTTG 59.872 44.000 5.42 0.00 41.36 2.93
4153 4217 4.782019 TTTGCATCCCATTGTAAGACAC 57.218 40.909 0.00 0.00 0.00 3.67
4250 4316 3.057033 ACTTGTCCTCATTGCAGAAATGC 60.057 43.478 0.00 0.00 44.63 3.56
4274 4340 4.899502 TCTGAGAAGTTCCCTTGATTGTC 58.100 43.478 0.00 0.00 0.00 3.18
4275 4341 4.006319 CTGAGAAGTTCCCTTGATTGTCC 58.994 47.826 0.00 0.00 0.00 4.02
4276 4342 3.652869 TGAGAAGTTCCCTTGATTGTCCT 59.347 43.478 0.00 0.00 0.00 3.85
4278 4344 3.652869 AGAAGTTCCCTTGATTGTCCTCA 59.347 43.478 0.00 0.00 0.00 3.86
4279 4345 4.290722 AGAAGTTCCCTTGATTGTCCTCAT 59.709 41.667 0.00 0.00 0.00 2.90
4280 4346 4.664688 AGTTCCCTTGATTGTCCTCATT 57.335 40.909 0.00 0.00 0.00 2.57
4281 4347 4.338879 AGTTCCCTTGATTGTCCTCATTG 58.661 43.478 0.00 0.00 0.00 2.82
4282 4348 2.726821 TCCCTTGATTGTCCTCATTGC 58.273 47.619 0.00 0.00 0.00 3.56
4285 4351 3.349927 CCTTGATTGTCCTCATTGCAGA 58.650 45.455 0.00 0.00 0.00 4.26
4286 4352 3.377485 CCTTGATTGTCCTCATTGCAGAG 59.623 47.826 0.00 0.00 35.39 3.35
4381 4449 4.021916 TGTACAGAAGGGTAGAGGTAAGC 58.978 47.826 0.00 0.00 0.00 3.09
4382 4450 3.185880 ACAGAAGGGTAGAGGTAAGCA 57.814 47.619 0.00 0.00 0.00 3.91
4714 4794 3.609853 TCCTGGATTCGACATGGAAAAG 58.390 45.455 0.00 0.00 0.00 2.27
4734 4814 5.941948 AAGGTATGCTAGTTGAACACAAC 57.058 39.130 0.00 0.00 42.65 3.32
4735 4815 4.968259 AGGTATGCTAGTTGAACACAACA 58.032 39.130 14.03 0.00 44.14 3.33
4736 4816 5.373222 AGGTATGCTAGTTGAACACAACAA 58.627 37.500 14.03 0.00 44.14 2.83
4737 4817 5.238650 AGGTATGCTAGTTGAACACAACAAC 59.761 40.000 14.03 0.00 44.14 3.32
4761 5268 4.141041 TCCCCCTTTTCTTGATGAAACTGA 60.141 41.667 0.00 0.00 43.55 3.41
4964 6306 5.009631 ACTTTGCCAAGCTGTTATACATCA 58.990 37.500 0.00 0.00 32.57 3.07
5066 11189 8.897752 GGGCAAAGATATTATTATCACATCTCC 58.102 37.037 7.25 1.86 37.31 3.71
5067 11190 9.453572 GGCAAAGATATTATTATCACATCTCCA 57.546 33.333 7.25 0.00 37.31 3.86
5177 11301 5.601662 TCCGGCTCAAATTACTTCTCTATG 58.398 41.667 0.00 0.00 0.00 2.23
5279 11409 2.286732 AAGCTGCCTCCCCAGGAT 60.287 61.111 0.00 0.00 43.65 3.24
5309 11439 5.050490 GTGCTTCTGAGAGTTGACTTTGTA 58.950 41.667 0.00 0.00 0.00 2.41
5347 11477 2.620115 TGCTGAAAGAAGTTGAAGCTGG 59.380 45.455 0.00 0.00 34.07 4.85
5488 11618 2.355513 CCCTGAAATGGTGAGGACTGAG 60.356 54.545 0.00 0.00 0.00 3.35
5552 11687 0.740737 CTTGCCCGGATGATTTCACC 59.259 55.000 0.73 0.00 0.00 4.02
5785 11925 1.214589 CACTCATGGCTGCAAAGGC 59.785 57.895 0.50 0.00 41.68 4.35
5823 11963 1.594862 CTTGTAATGCGAGCTACTGCC 59.405 52.381 2.96 0.00 40.80 4.85
5824 11964 0.824109 TGTAATGCGAGCTACTGCCT 59.176 50.000 2.96 0.00 40.80 4.75
5825 11965 1.202417 TGTAATGCGAGCTACTGCCTC 60.202 52.381 2.96 0.00 40.80 4.70
5826 11966 0.389391 TAATGCGAGCTACTGCCTCC 59.611 55.000 2.96 0.00 40.80 4.30
5827 11967 1.617018 AATGCGAGCTACTGCCTCCA 61.617 55.000 2.96 0.00 40.80 3.86
5828 11968 1.406065 ATGCGAGCTACTGCCTCCAT 61.406 55.000 2.96 0.00 40.80 3.41
5829 11969 1.144936 GCGAGCTACTGCCTCCATT 59.855 57.895 0.00 0.00 40.80 3.16
5830 11970 0.878086 GCGAGCTACTGCCTCCATTC 60.878 60.000 0.00 0.00 40.80 2.67
5831 11971 0.249657 CGAGCTACTGCCTCCATTCC 60.250 60.000 0.00 0.00 40.80 3.01
5832 11972 1.127343 GAGCTACTGCCTCCATTCCT 58.873 55.000 0.00 0.00 40.80 3.36
5833 11973 2.320781 GAGCTACTGCCTCCATTCCTA 58.679 52.381 0.00 0.00 40.80 2.94
5834 11974 2.700897 GAGCTACTGCCTCCATTCCTAA 59.299 50.000 0.00 0.00 40.80 2.69
5835 11975 3.115390 AGCTACTGCCTCCATTCCTAAA 58.885 45.455 0.00 0.00 40.80 1.85
5836 11976 3.718956 AGCTACTGCCTCCATTCCTAAAT 59.281 43.478 0.00 0.00 40.80 1.40
5837 11977 4.907875 AGCTACTGCCTCCATTCCTAAATA 59.092 41.667 0.00 0.00 40.80 1.40
5838 11978 5.549619 AGCTACTGCCTCCATTCCTAAATAT 59.450 40.000 0.00 0.00 40.80 1.28
5839 11979 6.044871 AGCTACTGCCTCCATTCCTAAATATT 59.955 38.462 0.00 0.00 40.80 1.28
5840 11980 6.717084 GCTACTGCCTCCATTCCTAAATATTT 59.283 38.462 5.89 5.89 0.00 1.40
5841 11981 6.966534 ACTGCCTCCATTCCTAAATATTTG 57.033 37.500 11.05 1.40 0.00 2.32
5842 11982 6.435164 ACTGCCTCCATTCCTAAATATTTGT 58.565 36.000 11.05 0.00 0.00 2.83
5843 11983 6.547510 ACTGCCTCCATTCCTAAATATTTGTC 59.452 38.462 11.05 0.00 0.00 3.18
5844 11984 6.672593 TGCCTCCATTCCTAAATATTTGTCT 58.327 36.000 11.05 0.00 0.00 3.41
5845 11985 7.125391 TGCCTCCATTCCTAAATATTTGTCTT 58.875 34.615 11.05 0.00 0.00 3.01
5846 11986 7.619302 TGCCTCCATTCCTAAATATTTGTCTTT 59.381 33.333 11.05 0.00 0.00 2.52
5847 11987 8.138074 GCCTCCATTCCTAAATATTTGTCTTTC 58.862 37.037 11.05 0.00 0.00 2.62
5848 11988 9.413734 CCTCCATTCCTAAATATTTGTCTTTCT 57.586 33.333 11.05 0.00 0.00 2.52
5853 11993 9.920946 ATTCCTAAATATTTGTCTTTCTAGGCA 57.079 29.630 11.05 0.00 33.22 4.75
5854 11994 9.920946 TTCCTAAATATTTGTCTTTCTAGGCAT 57.079 29.630 11.05 0.00 35.56 4.40
5855 11995 9.920946 TCCTAAATATTTGTCTTTCTAGGCATT 57.079 29.630 11.05 0.00 35.56 3.56
5862 12002 8.767478 ATTTGTCTTTCTAGGCATTTCAAATG 57.233 30.769 5.68 5.68 35.56 2.32
5863 12003 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
5864 12004 5.774690 TGTCTTTCTAGGCATTTCAAATGGT 59.225 36.000 12.14 0.00 29.10 3.55
5865 12005 6.267471 TGTCTTTCTAGGCATTTCAAATGGTT 59.733 34.615 12.14 0.00 29.10 3.67
5866 12006 7.450014 TGTCTTTCTAGGCATTTCAAATGGTTA 59.550 33.333 12.14 0.00 29.10 2.85
5867 12007 7.755373 GTCTTTCTAGGCATTTCAAATGGTTAC 59.245 37.037 12.14 0.00 0.00 2.50
5868 12008 7.450014 TCTTTCTAGGCATTTCAAATGGTTACA 59.550 33.333 12.14 0.00 0.00 2.41
5869 12009 7.531857 TTCTAGGCATTTCAAATGGTTACAA 57.468 32.000 12.14 0.00 0.00 2.41
5870 12010 6.919721 TCTAGGCATTTCAAATGGTTACAAC 58.080 36.000 12.14 0.00 0.00 3.32
5871 12011 5.543507 AGGCATTTCAAATGGTTACAACA 57.456 34.783 12.14 0.00 0.00 3.33
5872 12012 6.112927 AGGCATTTCAAATGGTTACAACAT 57.887 33.333 12.14 0.00 0.00 2.71
5873 12013 7.238486 AGGCATTTCAAATGGTTACAACATA 57.762 32.000 12.14 0.00 0.00 2.29
5874 12014 7.096551 AGGCATTTCAAATGGTTACAACATAC 58.903 34.615 12.14 0.00 0.00 2.39
5875 12015 6.870965 GGCATTTCAAATGGTTACAACATACA 59.129 34.615 12.14 0.00 0.00 2.29
5876 12016 7.063308 GGCATTTCAAATGGTTACAACATACAG 59.937 37.037 12.14 0.00 0.00 2.74
5877 12017 7.812191 GCATTTCAAATGGTTACAACATACAGA 59.188 33.333 12.14 0.00 0.00 3.41
5878 12018 9.859427 CATTTCAAATGGTTACAACATACAGAT 57.141 29.630 1.73 0.00 0.00 2.90
5879 12019 9.859427 ATTTCAAATGGTTACAACATACAGATG 57.141 29.630 0.00 0.00 39.16 2.90
5881 12021 9.508642 TTCAAATGGTTACAACATACAGATGTA 57.491 29.630 0.00 0.00 45.93 2.29
5882 12022 9.679661 TCAAATGGTTACAACATACAGATGTAT 57.320 29.630 0.00 0.00 45.93 2.29
5919 12059 8.810652 TTAAACTGTAGATTCAACCATTTTGC 57.189 30.769 0.00 0.00 0.00 3.68
5920 12060 6.655078 AACTGTAGATTCAACCATTTTGCT 57.345 33.333 0.00 0.00 0.00 3.91
5921 12061 6.655078 ACTGTAGATTCAACCATTTTGCTT 57.345 33.333 0.00 0.00 0.00 3.91
5922 12062 7.054491 ACTGTAGATTCAACCATTTTGCTTT 57.946 32.000 0.00 0.00 0.00 3.51
5923 12063 6.925165 ACTGTAGATTCAACCATTTTGCTTTG 59.075 34.615 0.00 0.00 0.00 2.77
5924 12064 6.815089 TGTAGATTCAACCATTTTGCTTTGT 58.185 32.000 0.00 0.00 0.00 2.83
5925 12065 7.946207 TGTAGATTCAACCATTTTGCTTTGTA 58.054 30.769 0.00 0.00 0.00 2.41
5926 12066 8.584157 TGTAGATTCAACCATTTTGCTTTGTAT 58.416 29.630 0.00 0.00 0.00 2.29
5927 12067 7.894376 AGATTCAACCATTTTGCTTTGTATG 57.106 32.000 0.00 0.00 0.00 2.39
5928 12068 7.444299 AGATTCAACCATTTTGCTTTGTATGT 58.556 30.769 0.00 0.00 0.00 2.29
5929 12069 8.584157 AGATTCAACCATTTTGCTTTGTATGTA 58.416 29.630 0.00 0.00 0.00 2.29
5930 12070 8.761575 ATTCAACCATTTTGCTTTGTATGTAG 57.238 30.769 0.00 0.00 0.00 2.74
5931 12071 7.283625 TCAACCATTTTGCTTTGTATGTAGT 57.716 32.000 0.00 0.00 0.00 2.73
5932 12072 7.367285 TCAACCATTTTGCTTTGTATGTAGTC 58.633 34.615 0.00 0.00 0.00 2.59
5933 12073 6.892658 ACCATTTTGCTTTGTATGTAGTCA 57.107 33.333 0.00 0.00 0.00 3.41
5934 12074 6.677913 ACCATTTTGCTTTGTATGTAGTCAC 58.322 36.000 0.00 0.00 0.00 3.67
5935 12075 6.490040 ACCATTTTGCTTTGTATGTAGTCACT 59.510 34.615 0.00 0.00 0.00 3.41
5936 12076 7.014230 ACCATTTTGCTTTGTATGTAGTCACTT 59.986 33.333 0.00 0.00 0.00 3.16
5937 12077 7.326789 CCATTTTGCTTTGTATGTAGTCACTTG 59.673 37.037 0.00 0.00 0.00 3.16
5938 12078 6.935741 TTTGCTTTGTATGTAGTCACTTGT 57.064 33.333 0.00 0.00 0.00 3.16
5939 12079 6.935741 TTGCTTTGTATGTAGTCACTTGTT 57.064 33.333 0.00 0.00 0.00 2.83
5940 12080 6.299023 TGCTTTGTATGTAGTCACTTGTTG 57.701 37.500 0.00 0.00 0.00 3.33
5941 12081 6.052360 TGCTTTGTATGTAGTCACTTGTTGA 58.948 36.000 0.00 0.00 0.00 3.18
5942 12082 6.710295 TGCTTTGTATGTAGTCACTTGTTGAT 59.290 34.615 0.00 0.00 36.32 2.57
5943 12083 7.875554 TGCTTTGTATGTAGTCACTTGTTGATA 59.124 33.333 0.00 0.00 36.32 2.15
5944 12084 8.883731 GCTTTGTATGTAGTCACTTGTTGATAT 58.116 33.333 0.00 0.00 36.32 1.63
5957 12097 9.996554 TCACTTGTTGATATCTTTAGAAAGACA 57.003 29.630 6.85 0.00 46.80 3.41
5973 12113 9.947433 TTAGAAAGACAAATATTTAGGAACGGA 57.053 29.630 0.00 0.00 0.00 4.69
5974 12114 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
5975 12115 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
5976 12116 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
6057 12197 6.517362 GCCTTCTAAAGTTCTCAATTGGCTTT 60.517 38.462 5.42 12.71 34.35 3.51
6155 12295 6.508404 GCACATTGCAAGAACTTGTAAAAGTG 60.508 38.462 27.42 27.42 45.48 3.16
6188 12328 7.661127 TTTGCATCTTTTTGGAAATCTCATG 57.339 32.000 0.00 0.00 32.82 3.07
6208 12348 3.969553 TGAGCTAGGACACTGTACATCT 58.030 45.455 0.00 0.00 0.00 2.90
6394 12549 1.751924 CTAGACCAAGGTTCGGGAGAG 59.248 57.143 0.00 0.00 41.75 3.20
6422 12577 1.133761 ACAGTAGATCTAGGCAGCCGA 60.134 52.381 5.55 0.00 0.00 5.54
6428 12583 1.547820 GATCTAGGCAGCCGATGATCA 59.452 52.381 25.88 0.00 32.90 2.92
6527 12684 2.920647 GCCCTGTCAATTTACACGTTGC 60.921 50.000 0.00 0.00 0.00 4.17
6692 12849 5.013547 TCTCTGCTACTAGTCTTGCTCTTT 58.986 41.667 0.00 0.00 0.00 2.52
6695 12852 5.478679 TCTGCTACTAGTCTTGCTCTTTTCT 59.521 40.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
495 496 3.972276 CTCTAGCTCCCGCTCCGC 61.972 72.222 0.00 0.00 45.15 5.54
496 497 1.582610 GATCTCTAGCTCCCGCTCCG 61.583 65.000 0.00 0.00 45.15 4.63
497 498 1.582610 CGATCTCTAGCTCCCGCTCC 61.583 65.000 0.00 0.00 45.15 4.70
498 499 1.582610 CCGATCTCTAGCTCCCGCTC 61.583 65.000 0.00 0.00 45.15 5.03
500 501 0.963355 ATCCGATCTCTAGCTCCCGC 60.963 60.000 0.00 0.00 0.00 6.13
501 502 1.091537 GATCCGATCTCTAGCTCCCG 58.908 60.000 0.75 0.00 0.00 5.14
502 503 1.091537 CGATCCGATCTCTAGCTCCC 58.908 60.000 6.81 0.00 0.00 4.30
503 504 1.091537 CCGATCCGATCTCTAGCTCC 58.908 60.000 6.81 0.00 0.00 4.70
504 505 2.102070 TCCGATCCGATCTCTAGCTC 57.898 55.000 6.81 0.00 0.00 4.09
505 506 2.238646 AGATCCGATCCGATCTCTAGCT 59.761 50.000 17.66 0.00 44.62 3.32
506 507 2.639065 AGATCCGATCCGATCTCTAGC 58.361 52.381 17.66 0.00 44.62 3.42
512 513 2.940410 GGAGTAGAGATCCGATCCGATC 59.060 54.545 14.14 14.14 39.21 3.69
513 514 2.356330 GGGAGTAGAGATCCGATCCGAT 60.356 54.545 4.67 0.00 37.75 4.18
514 515 1.003349 GGGAGTAGAGATCCGATCCGA 59.997 57.143 4.67 0.00 37.75 4.55
515 516 1.003812 AGGGAGTAGAGATCCGATCCG 59.996 57.143 4.67 0.00 37.75 4.18
516 517 2.823154 CAAGGGAGTAGAGATCCGATCC 59.177 54.545 4.67 0.00 37.75 3.36
517 518 3.757270 TCAAGGGAGTAGAGATCCGATC 58.243 50.000 0.00 0.00 37.75 3.69
518 519 3.885976 TCAAGGGAGTAGAGATCCGAT 57.114 47.619 0.00 0.00 37.75 4.18
519 520 3.117474 ACATCAAGGGAGTAGAGATCCGA 60.117 47.826 0.00 0.00 37.75 4.55
520 521 3.226777 ACATCAAGGGAGTAGAGATCCG 58.773 50.000 0.00 0.00 37.75 4.18
521 522 4.742138 GCAACATCAAGGGAGTAGAGATCC 60.742 50.000 0.00 0.00 35.99 3.36
522 523 4.100808 AGCAACATCAAGGGAGTAGAGATC 59.899 45.833 0.00 0.00 0.00 2.75
523 524 4.036518 AGCAACATCAAGGGAGTAGAGAT 58.963 43.478 0.00 0.00 0.00 2.75
524 525 3.445008 AGCAACATCAAGGGAGTAGAGA 58.555 45.455 0.00 0.00 0.00 3.10
525 526 3.736433 CGAGCAACATCAAGGGAGTAGAG 60.736 52.174 0.00 0.00 0.00 2.43
526 527 2.166459 CGAGCAACATCAAGGGAGTAGA 59.834 50.000 0.00 0.00 0.00 2.59
527 528 2.093973 ACGAGCAACATCAAGGGAGTAG 60.094 50.000 0.00 0.00 0.00 2.57
528 529 1.899814 ACGAGCAACATCAAGGGAGTA 59.100 47.619 0.00 0.00 0.00 2.59
529 530 0.687354 ACGAGCAACATCAAGGGAGT 59.313 50.000 0.00 0.00 0.00 3.85
530 531 1.081892 CACGAGCAACATCAAGGGAG 58.918 55.000 0.00 0.00 0.00 4.30
531 532 0.684535 TCACGAGCAACATCAAGGGA 59.315 50.000 0.00 0.00 0.00 4.20
532 533 1.399440 CATCACGAGCAACATCAAGGG 59.601 52.381 0.00 0.00 0.00 3.95
533 534 1.399440 CCATCACGAGCAACATCAAGG 59.601 52.381 0.00 0.00 0.00 3.61
534 535 1.202110 GCCATCACGAGCAACATCAAG 60.202 52.381 0.00 0.00 0.00 3.02
535 536 0.804364 GCCATCACGAGCAACATCAA 59.196 50.000 0.00 0.00 0.00 2.57
536 537 1.360931 CGCCATCACGAGCAACATCA 61.361 55.000 0.00 0.00 34.06 3.07
537 538 1.349627 CGCCATCACGAGCAACATC 59.650 57.895 0.00 0.00 34.06 3.06
538 539 0.955428 AACGCCATCACGAGCAACAT 60.955 50.000 0.00 0.00 36.70 2.71
539 540 1.565156 GAACGCCATCACGAGCAACA 61.565 55.000 0.00 0.00 36.70 3.33
540 541 1.132640 GAACGCCATCACGAGCAAC 59.867 57.895 0.00 0.00 36.70 4.17
541 542 2.032634 GGAACGCCATCACGAGCAA 61.033 57.895 0.00 0.00 36.70 3.91
542 543 2.434185 GGAACGCCATCACGAGCA 60.434 61.111 0.00 0.00 36.70 4.26
543 544 1.741770 AAGGAACGCCATCACGAGC 60.742 57.895 0.00 0.00 36.29 5.03
544 545 1.361668 CCAAGGAACGCCATCACGAG 61.362 60.000 0.00 0.00 36.29 4.18
545 546 1.375396 CCAAGGAACGCCATCACGA 60.375 57.895 0.00 0.00 36.29 4.35
546 547 2.398554 CCCAAGGAACGCCATCACG 61.399 63.158 0.00 0.00 36.29 4.35
547 548 0.893727 AACCCAAGGAACGCCATCAC 60.894 55.000 0.00 0.00 36.29 3.06
548 549 0.608035 GAACCCAAGGAACGCCATCA 60.608 55.000 0.00 0.00 36.29 3.07
549 550 1.644786 CGAACCCAAGGAACGCCATC 61.645 60.000 0.00 0.00 36.29 3.51
550 551 1.674322 CGAACCCAAGGAACGCCAT 60.674 57.895 0.00 0.00 36.29 4.40
551 552 2.281208 CGAACCCAAGGAACGCCA 60.281 61.111 0.00 0.00 36.29 5.69
552 553 3.733960 GCGAACCCAAGGAACGCC 61.734 66.667 14.36 0.00 41.35 5.68
553 554 2.458006 CTTGCGAACCCAAGGAACGC 62.458 60.000 16.93 16.93 44.55 4.84
554 555 1.164041 ACTTGCGAACCCAAGGAACG 61.164 55.000 6.82 0.00 44.98 3.95
555 556 1.029681 AACTTGCGAACCCAAGGAAC 58.970 50.000 6.82 0.00 44.98 3.62
556 557 2.619646 GTTAACTTGCGAACCCAAGGAA 59.380 45.455 0.00 0.00 44.98 3.36
557 558 2.223745 GTTAACTTGCGAACCCAAGGA 58.776 47.619 0.00 0.00 44.98 3.36
558 559 1.950909 TGTTAACTTGCGAACCCAAGG 59.049 47.619 7.22 0.00 44.98 3.61
559 560 3.368495 GTTGTTAACTTGCGAACCCAAG 58.632 45.455 7.22 0.72 45.90 3.61
560 561 2.223294 CGTTGTTAACTTGCGAACCCAA 60.223 45.455 7.22 0.00 0.00 4.12
561 562 1.331138 CGTTGTTAACTTGCGAACCCA 59.669 47.619 7.22 0.00 0.00 4.51
562 563 1.334329 CCGTTGTTAACTTGCGAACCC 60.334 52.381 7.22 0.00 0.00 4.11
563 564 1.598601 TCCGTTGTTAACTTGCGAACC 59.401 47.619 7.22 0.00 0.00 3.62
564 565 3.531262 ATCCGTTGTTAACTTGCGAAC 57.469 42.857 7.22 1.65 0.00 3.95
565 566 3.560481 TGAATCCGTTGTTAACTTGCGAA 59.440 39.130 7.22 0.00 0.00 4.70
566 567 3.132160 TGAATCCGTTGTTAACTTGCGA 58.868 40.909 7.22 0.00 0.00 5.10
567 568 3.529634 TGAATCCGTTGTTAACTTGCG 57.470 42.857 7.22 8.34 0.00 4.85
568 569 6.419413 TGAAAATGAATCCGTTGTTAACTTGC 59.581 34.615 7.22 0.00 0.00 4.01
569 570 7.922505 TGAAAATGAATCCGTTGTTAACTTG 57.077 32.000 7.22 0.00 0.00 3.16
570 571 9.541143 AATTGAAAATGAATCCGTTGTTAACTT 57.459 25.926 7.22 0.00 0.00 2.66
571 572 9.541143 AAATTGAAAATGAATCCGTTGTTAACT 57.459 25.926 7.22 0.00 0.00 2.24
592 593 6.618287 TGGGCGTTCTGAATCTATAAATTG 57.382 37.500 0.00 0.00 0.00 2.32
605 606 0.999406 CGTCAGTTATGGGCGTTCTG 59.001 55.000 0.00 0.00 0.00 3.02
608 609 1.435577 GTTCGTCAGTTATGGGCGTT 58.564 50.000 0.00 0.00 0.00 4.84
611 612 1.392510 GAACGTTCGTCAGTTATGGGC 59.607 52.381 13.36 0.00 0.00 5.36
628 629 0.033504 TGCCACCTTCTCTGACGAAC 59.966 55.000 0.00 0.00 0.00 3.95
645 646 4.243007 ACTAAAACTGTCAGGCAAATGC 57.757 40.909 4.53 0.00 41.14 3.56
653 664 6.055588 TCTCCCTTTCAACTAAAACTGTCAG 58.944 40.000 0.00 0.00 0.00 3.51
673 684 1.690633 TGCCACCTCTCCCATCTCC 60.691 63.158 0.00 0.00 0.00 3.71
674 685 0.689080 TCTGCCACCTCTCCCATCTC 60.689 60.000 0.00 0.00 0.00 2.75
675 686 0.980231 GTCTGCCACCTCTCCCATCT 60.980 60.000 0.00 0.00 0.00 2.90
676 687 1.267574 TGTCTGCCACCTCTCCCATC 61.268 60.000 0.00 0.00 0.00 3.51
677 688 0.622738 ATGTCTGCCACCTCTCCCAT 60.623 55.000 0.00 0.00 0.00 4.00
678 689 1.229625 ATGTCTGCCACCTCTCCCA 60.230 57.895 0.00 0.00 0.00 4.37
679 690 0.980231 AGATGTCTGCCACCTCTCCC 60.980 60.000 0.00 0.00 0.00 4.30
680 691 0.463620 GAGATGTCTGCCACCTCTCC 59.536 60.000 6.84 0.00 39.64 3.71
681 692 1.484038 AGAGATGTCTGCCACCTCTC 58.516 55.000 9.07 9.07 43.66 3.20
682 693 1.949799 AAGAGATGTCTGCCACCTCT 58.050 50.000 0.00 0.00 35.91 3.69
683 694 2.027745 TCAAAGAGATGTCTGCCACCTC 60.028 50.000 0.00 0.00 31.37 3.85
684 695 1.980765 TCAAAGAGATGTCTGCCACCT 59.019 47.619 0.00 0.00 31.37 4.00
685 696 2.027745 TCTCAAAGAGATGTCTGCCACC 60.028 50.000 0.00 0.00 33.35 4.61
686 697 3.325293 TCTCAAAGAGATGTCTGCCAC 57.675 47.619 0.00 0.00 33.35 5.01
693 704 7.227512 ACGAAAATTGTCTTCTCAAAGAGATGT 59.772 33.333 9.00 0.00 42.14 3.06
705 716 7.844169 GGCAGTTTTTAAACGAAAATTGTCTTC 59.156 33.333 0.00 0.00 43.51 2.87
710 721 7.850501 AGATGGCAGTTTTTAAACGAAAATTG 58.149 30.769 0.00 0.00 43.51 2.32
725 736 6.600882 AAAATGAGATCAAAGATGGCAGTT 57.399 33.333 0.00 0.00 0.00 3.16
726 737 6.660521 TGTAAAATGAGATCAAAGATGGCAGT 59.339 34.615 0.00 0.00 0.00 4.40
753 764 9.981114 AACCATCTTTACACTTTCCAATTTTAG 57.019 29.630 0.00 0.00 0.00 1.85
762 773 5.147162 CAAGCGAACCATCTTTACACTTTC 58.853 41.667 0.00 0.00 0.00 2.62
765 776 2.484264 GCAAGCGAACCATCTTTACACT 59.516 45.455 0.00 0.00 0.00 3.55
766 777 2.414161 GGCAAGCGAACCATCTTTACAC 60.414 50.000 0.00 0.00 0.00 2.90
767 778 1.810151 GGCAAGCGAACCATCTTTACA 59.190 47.619 0.00 0.00 0.00 2.41
780 791 1.156645 GCTGTAGAGGATGGCAAGCG 61.157 60.000 0.00 0.00 0.00 4.68
789 800 1.338973 ACGAACGTTTGCTGTAGAGGA 59.661 47.619 15.63 0.00 0.00 3.71
792 803 2.390938 CTGACGAACGTTTGCTGTAGA 58.609 47.619 15.63 0.00 0.00 2.59
797 808 2.080286 ATAGCTGACGAACGTTTGCT 57.920 45.000 15.63 22.40 39.15 3.91
821 860 1.816835 TGTCTTTCGCAGATCTACCGT 59.183 47.619 12.83 0.00 35.04 4.83
822 861 2.561733 TGTCTTTCGCAGATCTACCG 57.438 50.000 0.00 1.37 35.04 4.02
823 862 3.001736 GCAATGTCTTTCGCAGATCTACC 59.998 47.826 0.00 0.00 35.04 3.18
824 863 3.001736 GGCAATGTCTTTCGCAGATCTAC 59.998 47.826 0.00 0.00 35.04 2.59
825 864 3.198068 GGCAATGTCTTTCGCAGATCTA 58.802 45.455 0.00 0.00 35.04 1.98
826 865 2.012673 GGCAATGTCTTTCGCAGATCT 58.987 47.619 0.00 0.00 35.04 2.75
827 866 1.739466 TGGCAATGTCTTTCGCAGATC 59.261 47.619 0.00 0.00 35.04 2.75
828 867 1.470098 GTGGCAATGTCTTTCGCAGAT 59.530 47.619 0.00 0.00 35.04 2.90
829 868 0.874390 GTGGCAATGTCTTTCGCAGA 59.126 50.000 0.00 0.00 0.00 4.26
830 869 0.877071 AGTGGCAATGTCTTTCGCAG 59.123 50.000 0.00 0.00 0.00 5.18
831 870 0.592637 CAGTGGCAATGTCTTTCGCA 59.407 50.000 6.80 0.00 0.00 5.10
832 871 0.593128 ACAGTGGCAATGTCTTTCGC 59.407 50.000 15.75 0.00 0.00 4.70
833 872 2.350772 GGAACAGTGGCAATGTCTTTCG 60.351 50.000 21.79 0.00 0.00 3.46
834 873 2.622942 TGGAACAGTGGCAATGTCTTTC 59.377 45.455 21.79 14.72 0.00 2.62
845 884 2.293122 TGAGCGATTTTTGGAACAGTGG 59.707 45.455 0.00 0.00 42.39 4.00
852 891 3.436704 GTGACTCATGAGCGATTTTTGGA 59.563 43.478 22.83 0.00 0.00 3.53
854 893 3.426695 GGGTGACTCATGAGCGATTTTTG 60.427 47.826 22.83 0.00 0.00 2.44
856 895 2.359900 GGGTGACTCATGAGCGATTTT 58.640 47.619 22.83 1.35 0.00 1.82
858 897 0.179100 CGGGTGACTCATGAGCGATT 60.179 55.000 22.83 2.59 0.00 3.34
861 900 2.887568 GCGGGTGACTCATGAGCG 60.888 66.667 22.83 17.46 0.00 5.03
862 901 0.745845 ATTGCGGGTGACTCATGAGC 60.746 55.000 22.83 15.26 0.00 4.26
863 902 1.742761 AATTGCGGGTGACTCATGAG 58.257 50.000 21.37 21.37 0.00 2.90
864 903 2.198827 AAATTGCGGGTGACTCATGA 57.801 45.000 0.00 0.00 0.00 3.07
865 904 3.302365 AAAAATTGCGGGTGACTCATG 57.698 42.857 0.00 0.00 0.00 3.07
1010 1049 3.257561 CACGAGCTTCGCCGATGG 61.258 66.667 2.03 0.00 45.12 3.51
1013 1052 3.324099 GAGTCACGAGCTTCGCCGA 62.324 63.158 0.00 0.00 45.12 5.54
1133 1178 2.438795 AGACGAGACGGAGAGGGC 60.439 66.667 0.00 0.00 0.00 5.19
1137 1182 2.333417 GGTGCAGACGAGACGGAGA 61.333 63.158 0.00 0.00 0.00 3.71
1242 1287 2.124942 GAGGCCGAGGAAAGCTGG 60.125 66.667 0.00 0.00 0.00 4.85
1354 1399 4.944930 GCCTCTGAGAACTACTCTACTTGA 59.055 45.833 6.17 0.00 45.13 3.02
1356 1401 4.924625 TGCCTCTGAGAACTACTCTACTT 58.075 43.478 6.17 0.00 45.13 2.24
1435 1480 6.092259 GGCAGAGTTTACTATAACCACAAGTG 59.908 42.308 0.00 0.00 0.00 3.16
1530 1577 9.814899 TTGTGGAATTGCAAATATAACTAATGG 57.185 29.630 1.71 0.00 0.00 3.16
1543 1590 8.782144 GGAAGAAATTTTATTGTGGAATTGCAA 58.218 29.630 0.00 0.00 0.00 4.08
1594 1641 6.268387 CAGGACCTTGCAAATGGGATTAATAT 59.732 38.462 10.01 0.00 0.00 1.28
1635 1684 1.456705 TGCCCACTCCCCAAAACAC 60.457 57.895 0.00 0.00 0.00 3.32
1636 1685 1.152567 CTGCCCACTCCCCAAAACA 60.153 57.895 0.00 0.00 0.00 2.83
1695 1744 1.098050 AATGAACAGCCGGAGATTGC 58.902 50.000 5.05 0.00 0.00 3.56
1728 1777 3.003689 CCCTAATGATGCCGATTTGTCAC 59.996 47.826 0.00 0.00 0.00 3.67
1756 1805 4.090761 AGGACCATCGACAATGCATATT 57.909 40.909 0.00 0.00 33.71 1.28
1884 1934 7.066887 TCCGATACAAATAGCATGTCACAATTT 59.933 33.333 0.00 0.00 32.27 1.82
1911 1961 2.771943 GGGGTGAATAGAGATGTGTGGA 59.228 50.000 0.00 0.00 0.00 4.02
2003 2053 7.342799 ACAACATAAATTATGCTCCCAACAGAT 59.657 33.333 12.50 0.00 39.79 2.90
2073 2123 5.423015 TCATTGCAAGATGTTAGGAGAGAC 58.577 41.667 4.94 0.00 0.00 3.36
2138 2188 7.971168 AGTCTAGACAATGAACTGAGATTAACG 59.029 37.037 24.44 0.00 0.00 3.18
2219 2269 5.309806 ACTCACATAAGTATAATCCCCCACC 59.690 44.000 0.00 0.00 0.00 4.61
2220 2270 6.435292 ACTCACATAAGTATAATCCCCCAC 57.565 41.667 0.00 0.00 0.00 4.61
2221 2271 6.617784 TCAACTCACATAAGTATAATCCCCCA 59.382 38.462 0.00 0.00 0.00 4.96
2339 2389 2.420568 CCGCTGATTGGCTTGCCAT 61.421 57.895 15.58 5.79 0.00 4.40
2930 2980 1.970447 CACGTGCTAGAGAGTCACAC 58.030 55.000 0.82 0.00 32.48 3.82
2937 2987 0.457443 CTGGATGCACGTGCTAGAGA 59.543 55.000 37.59 20.41 42.66 3.10
2994 3044 4.875544 ACGGTGTTCGAATTTCCATATG 57.124 40.909 0.00 0.00 42.43 1.78
3030 3080 7.562454 AACATAACTTCGAACTTCCTTTTCA 57.438 32.000 0.00 0.00 0.00 2.69
3140 3190 8.316946 CCTTCTCAATTACCTGCATATAGATGA 58.683 37.037 0.39 0.00 34.73 2.92
3482 3542 4.096732 AGCTGCGACAATTAATTTGGAC 57.903 40.909 0.00 0.00 39.80 4.02
3550 3610 4.760530 TTTGTACTCCCTCTGATCCATG 57.239 45.455 0.00 0.00 0.00 3.66
3734 3794 7.696981 ACGGAGGGAGTATATGAGATACTAAA 58.303 38.462 0.00 0.00 35.20 1.85
3750 3810 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.000 12.80 12.80 41.36 4.30
3751 3811 1.588239 TACTCACCTAGACGGAGGGA 58.412 55.000 5.42 0.16 41.36 4.20
3752 3812 2.299521 CTTACTCACCTAGACGGAGGG 58.700 57.143 5.42 0.00 41.36 4.30
3753 3813 2.944349 GACTTACTCACCTAGACGGAGG 59.056 54.545 0.00 0.00 42.89 4.30
3754 3814 3.374678 GTGACTTACTCACCTAGACGGAG 59.625 52.174 0.00 0.00 43.35 4.63
3755 3815 3.341823 GTGACTTACTCACCTAGACGGA 58.658 50.000 0.00 0.00 43.35 4.69
3756 3816 3.761311 GTGACTTACTCACCTAGACGG 57.239 52.381 0.00 0.00 43.35 4.79
3771 3831 0.035458 GTGCACAGCCTAAGGTGACT 59.965 55.000 13.17 0.00 44.53 3.41
3772 3832 0.955919 GGTGCACAGCCTAAGGTGAC 60.956 60.000 20.43 0.00 44.53 3.67
3773 3833 1.374947 GGTGCACAGCCTAAGGTGA 59.625 57.895 20.43 0.00 44.53 4.02
3775 3835 2.347490 CGGTGCACAGCCTAAGGT 59.653 61.111 20.43 0.00 0.00 3.50
3776 3836 2.034879 CACGGTGCACAGCCTAAGG 61.035 63.158 20.43 0.00 0.00 2.69
3777 3837 1.005037 TCACGGTGCACAGCCTAAG 60.005 57.895 20.43 3.60 0.00 2.18
3778 3838 1.301401 GTCACGGTGCACAGCCTAA 60.301 57.895 20.43 0.00 0.00 2.69
3779 3839 2.342279 GTCACGGTGCACAGCCTA 59.658 61.111 20.43 0.49 0.00 3.93
3780 3840 4.626081 GGTCACGGTGCACAGCCT 62.626 66.667 20.43 0.00 0.00 4.58
3781 3841 4.927782 TGGTCACGGTGCACAGCC 62.928 66.667 20.43 11.90 0.00 4.85
3782 3842 2.896801 CTTGGTCACGGTGCACAGC 61.897 63.158 20.43 8.20 0.00 4.40
3783 3843 2.253758 CCTTGGTCACGGTGCACAG 61.254 63.158 20.43 18.06 0.00 3.66
3784 3844 2.203139 CCTTGGTCACGGTGCACA 60.203 61.111 20.43 1.81 0.00 4.57
3785 3845 1.961277 CTCCTTGGTCACGGTGCAC 60.961 63.158 8.80 8.80 0.00 4.57
3786 3846 2.425592 CTCCTTGGTCACGGTGCA 59.574 61.111 2.51 0.00 0.00 4.57
3787 3847 2.358737 CCTCCTTGGTCACGGTGC 60.359 66.667 2.51 0.00 0.00 5.01
3788 3848 1.293498 CTCCTCCTTGGTCACGGTG 59.707 63.158 0.56 0.56 37.07 4.94
3789 3849 1.913762 CCTCCTCCTTGGTCACGGT 60.914 63.158 0.00 0.00 37.07 4.83
3790 3850 2.660064 CCCTCCTCCTTGGTCACGG 61.660 68.421 0.00 0.00 37.07 4.94
3791 3851 2.660064 CCCCTCCTCCTTGGTCACG 61.660 68.421 0.00 0.00 37.07 4.35
3792 3852 0.840722 TTCCCCTCCTCCTTGGTCAC 60.841 60.000 0.00 0.00 37.07 3.67
3793 3853 0.104144 TTTCCCCTCCTCCTTGGTCA 60.104 55.000 0.00 0.00 37.07 4.02
3794 3854 1.073098 TTTTCCCCTCCTCCTTGGTC 58.927 55.000 0.00 0.00 37.07 4.02
3795 3855 0.778083 GTTTTCCCCTCCTCCTTGGT 59.222 55.000 0.00 0.00 37.07 3.67
3796 3856 0.322546 CGTTTTCCCCTCCTCCTTGG 60.323 60.000 0.00 0.00 37.10 3.61
3797 3857 0.690762 TCGTTTTCCCCTCCTCCTTG 59.309 55.000 0.00 0.00 0.00 3.61
3798 3858 0.984995 CTCGTTTTCCCCTCCTCCTT 59.015 55.000 0.00 0.00 0.00 3.36
3799 3859 0.116541 TCTCGTTTTCCCCTCCTCCT 59.883 55.000 0.00 0.00 0.00 3.69
3800 3860 0.981943 TTCTCGTTTTCCCCTCCTCC 59.018 55.000 0.00 0.00 0.00 4.30
3801 3861 2.424557 GTTTCTCGTTTTCCCCTCCTC 58.575 52.381 0.00 0.00 0.00 3.71
3802 3862 1.270678 CGTTTCTCGTTTTCCCCTCCT 60.271 52.381 0.00 0.00 34.52 3.69
3803 3863 1.154197 CGTTTCTCGTTTTCCCCTCC 58.846 55.000 0.00 0.00 34.52 4.30
3814 3874 7.775729 AGCAAATAAACATTAACGTTTCTCG 57.224 32.000 5.91 0.00 39.70 4.04
3835 3895 9.628746 CATTGCATGCAATACTATTAATTAGCA 57.371 29.630 38.08 12.02 43.92 3.49
3836 3896 9.844790 TCATTGCATGCAATACTATTAATTAGC 57.155 29.630 38.08 0.00 43.92 3.09
3843 3903 8.137437 GGTTAGTTCATTGCATGCAATACTATT 58.863 33.333 34.90 25.58 43.92 1.73
3844 3904 7.285172 TGGTTAGTTCATTGCATGCAATACTAT 59.715 33.333 34.90 27.15 43.92 2.12
3845 3905 6.601217 TGGTTAGTTCATTGCATGCAATACTA 59.399 34.615 38.08 35.10 43.92 1.82
3846 3906 5.418524 TGGTTAGTTCATTGCATGCAATACT 59.581 36.000 38.08 35.98 43.92 2.12
3847 3907 5.516339 GTGGTTAGTTCATTGCATGCAATAC 59.484 40.000 38.08 32.43 43.92 1.89
3848 3908 5.418524 AGTGGTTAGTTCATTGCATGCAATA 59.581 36.000 38.08 25.05 43.92 1.90
3849 3909 4.221262 AGTGGTTAGTTCATTGCATGCAAT 59.779 37.500 34.78 34.78 46.35 3.56
3850 3910 3.573538 AGTGGTTAGTTCATTGCATGCAA 59.426 39.130 33.57 33.57 40.47 4.08
3851 3911 3.057386 CAGTGGTTAGTTCATTGCATGCA 60.057 43.478 18.46 18.46 0.00 3.96
3852 3912 3.504863 CAGTGGTTAGTTCATTGCATGC 58.495 45.455 11.82 11.82 0.00 4.06
3853 3913 3.504863 GCAGTGGTTAGTTCATTGCATG 58.495 45.455 6.68 0.00 44.01 4.06
3854 3914 3.855689 GCAGTGGTTAGTTCATTGCAT 57.144 42.857 6.68 0.00 44.01 3.96
3856 3916 3.057315 ACATGCAGTGGTTAGTTCATTGC 60.057 43.478 0.00 4.92 44.56 3.56
3857 3917 4.669965 CGACATGCAGTGGTTAGTTCATTG 60.670 45.833 0.00 0.00 0.00 2.82
3858 3918 3.436704 CGACATGCAGTGGTTAGTTCATT 59.563 43.478 0.00 0.00 0.00 2.57
3859 3919 3.002791 CGACATGCAGTGGTTAGTTCAT 58.997 45.455 0.00 0.00 0.00 2.57
3860 3920 2.224185 ACGACATGCAGTGGTTAGTTCA 60.224 45.455 0.00 0.00 35.47 3.18
3861 3921 2.157668 CACGACATGCAGTGGTTAGTTC 59.842 50.000 11.93 0.00 37.03 3.01
3862 3922 2.143122 CACGACATGCAGTGGTTAGTT 58.857 47.619 11.93 0.00 37.03 2.24
3863 3923 1.070134 ACACGACATGCAGTGGTTAGT 59.930 47.619 20.60 1.96 42.25 2.24
3864 3924 1.795768 ACACGACATGCAGTGGTTAG 58.204 50.000 20.60 1.38 42.25 2.34
3865 3925 2.248280 AACACGACATGCAGTGGTTA 57.752 45.000 20.60 0.00 42.25 2.85
3866 3926 1.388547 AAACACGACATGCAGTGGTT 58.611 45.000 20.60 18.36 42.73 3.67
3867 3927 0.662619 CAAACACGACATGCAGTGGT 59.337 50.000 20.60 14.15 42.25 4.16
3868 3928 0.943673 TCAAACACGACATGCAGTGG 59.056 50.000 20.60 7.50 42.25 4.00
3869 3929 2.975410 ATCAAACACGACATGCAGTG 57.025 45.000 16.62 16.62 43.46 3.66
3870 3930 3.664107 ACTATCAAACACGACATGCAGT 58.336 40.909 0.00 0.00 0.00 4.40
3871 3931 3.928992 AGACTATCAAACACGACATGCAG 59.071 43.478 0.00 0.00 0.00 4.41
3872 3932 3.925379 AGACTATCAAACACGACATGCA 58.075 40.909 0.00 0.00 0.00 3.96
3873 3933 3.926527 TGAGACTATCAAACACGACATGC 59.073 43.478 0.00 0.00 34.02 4.06
3884 3944 8.846943 TGCTTTTAATGACTTGAGACTATCAA 57.153 30.769 0.00 0.00 45.79 2.57
3885 3945 8.886719 CATGCTTTTAATGACTTGAGACTATCA 58.113 33.333 0.00 0.00 35.62 2.15
3886 3946 7.854916 GCATGCTTTTAATGACTTGAGACTATC 59.145 37.037 11.37 0.00 0.00 2.08
3887 3947 7.337689 TGCATGCTTTTAATGACTTGAGACTAT 59.662 33.333 20.33 0.00 0.00 2.12
3888 3948 6.654582 TGCATGCTTTTAATGACTTGAGACTA 59.345 34.615 20.33 0.00 0.00 2.59
3889 3949 5.474532 TGCATGCTTTTAATGACTTGAGACT 59.525 36.000 20.33 0.00 0.00 3.24
3890 3950 5.570589 GTGCATGCTTTTAATGACTTGAGAC 59.429 40.000 20.33 0.00 0.00 3.36
3891 3951 5.241285 TGTGCATGCTTTTAATGACTTGAGA 59.759 36.000 20.33 0.00 0.00 3.27
3892 3952 5.344128 GTGTGCATGCTTTTAATGACTTGAG 59.656 40.000 20.33 0.00 0.00 3.02
3893 3953 5.009911 AGTGTGCATGCTTTTAATGACTTGA 59.990 36.000 20.33 0.00 0.00 3.02
3894 3954 5.224888 AGTGTGCATGCTTTTAATGACTTG 58.775 37.500 20.33 0.00 0.00 3.16
3895 3955 5.242393 AGAGTGTGCATGCTTTTAATGACTT 59.758 36.000 20.33 0.00 0.00 3.01
3896 3956 4.763793 AGAGTGTGCATGCTTTTAATGACT 59.236 37.500 20.33 8.46 0.00 3.41
3897 3957 5.051891 AGAGTGTGCATGCTTTTAATGAC 57.948 39.130 20.33 6.41 0.00 3.06
3898 3958 5.710513 AAGAGTGTGCATGCTTTTAATGA 57.289 34.783 20.33 0.00 0.00 2.57
3899 3959 7.972277 AGATAAAGAGTGTGCATGCTTTTAATG 59.028 33.333 20.33 0.00 33.16 1.90
3900 3960 8.059798 AGATAAAGAGTGTGCATGCTTTTAAT 57.940 30.769 20.33 1.41 33.16 1.40
3901 3961 7.391554 AGAGATAAAGAGTGTGCATGCTTTTAA 59.608 33.333 20.33 0.00 33.16 1.52
3902 3962 6.881065 AGAGATAAAGAGTGTGCATGCTTTTA 59.119 34.615 20.33 13.06 33.16 1.52
3903 3963 5.709164 AGAGATAAAGAGTGTGCATGCTTTT 59.291 36.000 20.33 11.49 33.16 2.27
3904 3964 5.251764 AGAGATAAAGAGTGTGCATGCTTT 58.748 37.500 20.33 12.04 35.09 3.51
3905 3965 4.841422 AGAGATAAAGAGTGTGCATGCTT 58.159 39.130 20.33 5.25 0.00 3.91
3906 3966 4.484537 AGAGATAAAGAGTGTGCATGCT 57.515 40.909 20.33 0.00 0.00 3.79
3907 3967 6.857777 ATAAGAGATAAAGAGTGTGCATGC 57.142 37.500 11.82 11.82 0.00 4.06
3908 3968 7.281774 ACCAATAAGAGATAAAGAGTGTGCATG 59.718 37.037 0.00 0.00 0.00 4.06
3909 3969 7.341805 ACCAATAAGAGATAAAGAGTGTGCAT 58.658 34.615 0.00 0.00 0.00 3.96
3910 3970 6.711277 ACCAATAAGAGATAAAGAGTGTGCA 58.289 36.000 0.00 0.00 0.00 4.57
3911 3971 7.334421 TCAACCAATAAGAGATAAAGAGTGTGC 59.666 37.037 0.00 0.00 0.00 4.57
3912 3972 8.777865 TCAACCAATAAGAGATAAAGAGTGTG 57.222 34.615 0.00 0.00 0.00 3.82
3923 3983 9.958180 TTTCTTGACATATCAACCAATAAGAGA 57.042 29.630 0.00 0.00 40.01 3.10
3924 3984 9.994432 GTTTCTTGACATATCAACCAATAAGAG 57.006 33.333 0.00 0.00 40.01 2.85
3925 3985 9.513906 TGTTTCTTGACATATCAACCAATAAGA 57.486 29.630 0.00 0.00 40.01 2.10
3928 3988 9.513906 TCTTGTTTCTTGACATATCAACCAATA 57.486 29.630 0.00 0.00 40.01 1.90
3929 3989 8.408043 TCTTGTTTCTTGACATATCAACCAAT 57.592 30.769 0.00 0.00 40.01 3.16
3930 3990 7.815840 TCTTGTTTCTTGACATATCAACCAA 57.184 32.000 0.00 0.00 40.01 3.67
3931 3991 7.815840 TTCTTGTTTCTTGACATATCAACCA 57.184 32.000 0.00 0.00 40.01 3.67
3932 3992 7.323656 CGTTTCTTGTTTCTTGACATATCAACC 59.676 37.037 0.00 0.00 40.01 3.77
3933 3993 8.067784 TCGTTTCTTGTTTCTTGACATATCAAC 58.932 33.333 0.00 0.00 40.01 3.18
3934 3994 8.148807 TCGTTTCTTGTTTCTTGACATATCAA 57.851 30.769 0.00 0.00 42.73 2.57
3935 3995 7.095229 CCTCGTTTCTTGTTTCTTGACATATCA 60.095 37.037 0.00 0.00 0.00 2.15
3936 3996 7.095187 ACCTCGTTTCTTGTTTCTTGACATATC 60.095 37.037 0.00 0.00 0.00 1.63
3937 3997 6.710744 ACCTCGTTTCTTGTTTCTTGACATAT 59.289 34.615 0.00 0.00 0.00 1.78
3938 3998 6.053005 ACCTCGTTTCTTGTTTCTTGACATA 58.947 36.000 0.00 0.00 0.00 2.29
3939 3999 4.881850 ACCTCGTTTCTTGTTTCTTGACAT 59.118 37.500 0.00 0.00 0.00 3.06
3940 4000 4.258543 ACCTCGTTTCTTGTTTCTTGACA 58.741 39.130 0.00 0.00 0.00 3.58
3941 4001 4.877323 ACCTCGTTTCTTGTTTCTTGAC 57.123 40.909 0.00 0.00 0.00 3.18
3942 4002 5.909477 TCTACCTCGTTTCTTGTTTCTTGA 58.091 37.500 0.00 0.00 0.00 3.02
3943 4003 6.258068 ACTTCTACCTCGTTTCTTGTTTCTTG 59.742 38.462 0.00 0.00 0.00 3.02
3944 4004 6.346896 ACTTCTACCTCGTTTCTTGTTTCTT 58.653 36.000 0.00 0.00 0.00 2.52
3945 4005 5.915175 ACTTCTACCTCGTTTCTTGTTTCT 58.085 37.500 0.00 0.00 0.00 2.52
3946 4006 6.600246 AACTTCTACCTCGTTTCTTGTTTC 57.400 37.500 0.00 0.00 0.00 2.78
3947 4007 8.557029 CATTAACTTCTACCTCGTTTCTTGTTT 58.443 33.333 0.00 0.00 0.00 2.83
3948 4008 7.307811 GCATTAACTTCTACCTCGTTTCTTGTT 60.308 37.037 0.00 0.00 0.00 2.83
3949 4009 6.147328 GCATTAACTTCTACCTCGTTTCTTGT 59.853 38.462 0.00 0.00 0.00 3.16
3950 4010 6.147164 TGCATTAACTTCTACCTCGTTTCTTG 59.853 38.462 0.00 0.00 0.00 3.02
3951 4011 6.147328 GTGCATTAACTTCTACCTCGTTTCTT 59.853 38.462 0.00 0.00 0.00 2.52
3952 4012 5.638234 GTGCATTAACTTCTACCTCGTTTCT 59.362 40.000 0.00 0.00 0.00 2.52
3953 4013 5.163884 GGTGCATTAACTTCTACCTCGTTTC 60.164 44.000 0.00 0.00 0.00 2.78
3954 4014 4.694037 GGTGCATTAACTTCTACCTCGTTT 59.306 41.667 0.00 0.00 0.00 3.60
3955 4015 4.251268 GGTGCATTAACTTCTACCTCGTT 58.749 43.478 0.00 0.00 0.00 3.85
3956 4016 3.259876 TGGTGCATTAACTTCTACCTCGT 59.740 43.478 0.00 0.00 0.00 4.18
3957 4017 3.617263 GTGGTGCATTAACTTCTACCTCG 59.383 47.826 0.00 0.00 0.00 4.63
3958 4018 3.617263 CGTGGTGCATTAACTTCTACCTC 59.383 47.826 0.00 0.00 0.00 3.85
3959 4019 3.596214 CGTGGTGCATTAACTTCTACCT 58.404 45.455 0.00 0.00 0.00 3.08
3960 4020 2.095372 GCGTGGTGCATTAACTTCTACC 59.905 50.000 0.00 0.00 45.45 3.18
3961 4021 3.385079 GCGTGGTGCATTAACTTCTAC 57.615 47.619 0.00 0.00 45.45 2.59
3973 4033 0.666374 AAAACACTTAGGCGTGGTGC 59.334 50.000 12.12 0.00 45.38 5.01
3974 4034 1.001815 CCAAAACACTTAGGCGTGGTG 60.002 52.381 11.07 11.07 39.19 4.17
3975 4035 1.314730 CCAAAACACTTAGGCGTGGT 58.685 50.000 0.00 0.00 39.19 4.16
3976 4036 0.596082 CCCAAAACACTTAGGCGTGG 59.404 55.000 0.00 0.00 39.19 4.94
3977 4037 1.600023 TCCCAAAACACTTAGGCGTG 58.400 50.000 0.00 0.00 40.67 5.34
3978 4038 2.579410 ATCCCAAAACACTTAGGCGT 57.421 45.000 0.00 0.00 0.00 5.68
3979 4039 5.576447 AATAATCCCAAAACACTTAGGCG 57.424 39.130 0.00 0.00 0.00 5.52
3980 4040 6.106003 CCAAATAATCCCAAAACACTTAGGC 58.894 40.000 0.00 0.00 0.00 3.93
3981 4041 7.239763 ACCAAATAATCCCAAAACACTTAGG 57.760 36.000 0.00 0.00 0.00 2.69
3982 4042 9.554395 AAAACCAAATAATCCCAAAACACTTAG 57.446 29.630 0.00 0.00 0.00 2.18
3983 4043 9.549078 GAAAACCAAATAATCCCAAAACACTTA 57.451 29.630 0.00 0.00 0.00 2.24
3984 4044 8.049721 TGAAAACCAAATAATCCCAAAACACTT 58.950 29.630 0.00 0.00 0.00 3.16
3985 4045 7.569240 TGAAAACCAAATAATCCCAAAACACT 58.431 30.769 0.00 0.00 0.00 3.55
3986 4046 7.793927 TGAAAACCAAATAATCCCAAAACAC 57.206 32.000 0.00 0.00 0.00 3.32
3992 4052 9.486123 TCATCTTATGAAAACCAAATAATCCCA 57.514 29.630 0.00 0.00 36.11 4.37
3993 4053 9.750125 GTCATCTTATGAAAACCAAATAATCCC 57.250 33.333 0.00 0.00 41.69 3.85
4000 4060 9.126151 TGTGTAAGTCATCTTATGAAAACCAAA 57.874 29.630 0.00 0.00 41.69 3.28
4001 4061 8.564574 GTGTGTAAGTCATCTTATGAAAACCAA 58.435 33.333 0.00 0.00 41.69 3.67
4002 4062 7.174253 GGTGTGTAAGTCATCTTATGAAAACCA 59.826 37.037 0.00 0.00 41.69 3.67
4003 4063 7.390718 AGGTGTGTAAGTCATCTTATGAAAACC 59.609 37.037 0.00 0.00 41.69 3.27
4004 4064 8.324163 AGGTGTGTAAGTCATCTTATGAAAAC 57.676 34.615 0.00 0.00 41.69 2.43
4007 4067 9.431887 GTTTAGGTGTGTAAGTCATCTTATGAA 57.568 33.333 0.00 0.00 41.69 2.57
4008 4068 7.758076 CGTTTAGGTGTGTAAGTCATCTTATGA 59.242 37.037 0.00 0.00 38.25 2.15
4009 4069 7.010183 CCGTTTAGGTGTGTAAGTCATCTTATG 59.990 40.741 0.00 0.00 35.59 1.90
4010 4070 7.039882 CCGTTTAGGTGTGTAAGTCATCTTAT 58.960 38.462 0.00 0.00 35.59 1.73
4011 4071 6.209192 TCCGTTTAGGTGTGTAAGTCATCTTA 59.791 38.462 0.00 0.00 41.99 2.10
4012 4072 5.011329 TCCGTTTAGGTGTGTAAGTCATCTT 59.989 40.000 0.00 0.00 41.99 2.40
4013 4073 4.525487 TCCGTTTAGGTGTGTAAGTCATCT 59.475 41.667 0.00 0.00 41.99 2.90
4014 4074 4.813027 TCCGTTTAGGTGTGTAAGTCATC 58.187 43.478 0.00 0.00 41.99 2.92
4015 4075 4.322499 CCTCCGTTTAGGTGTGTAAGTCAT 60.322 45.833 0.00 0.00 41.99 3.06
4016 4076 3.006110 CCTCCGTTTAGGTGTGTAAGTCA 59.994 47.826 0.00 0.00 41.99 3.41
4017 4077 3.582780 CCTCCGTTTAGGTGTGTAAGTC 58.417 50.000 0.00 0.00 41.99 3.01
4018 4078 2.301009 CCCTCCGTTTAGGTGTGTAAGT 59.699 50.000 0.00 0.00 41.99 2.24
4019 4079 2.564062 TCCCTCCGTTTAGGTGTGTAAG 59.436 50.000 0.00 0.00 41.99 2.34
4020 4080 2.564062 CTCCCTCCGTTTAGGTGTGTAA 59.436 50.000 0.00 0.00 41.99 2.41
4021 4081 2.173519 CTCCCTCCGTTTAGGTGTGTA 58.826 52.381 0.00 0.00 41.99 2.90
4022 4082 0.974383 CTCCCTCCGTTTAGGTGTGT 59.026 55.000 0.00 0.00 41.99 3.72
4023 4083 0.974383 ACTCCCTCCGTTTAGGTGTG 59.026 55.000 0.00 0.00 41.99 3.82
4024 4084 2.610438 TACTCCCTCCGTTTAGGTGT 57.390 50.000 0.00 0.00 41.99 4.16
4025 4085 4.213513 ACTATACTCCCTCCGTTTAGGTG 58.786 47.826 0.00 0.00 41.99 4.00
4026 4086 4.533001 ACTATACTCCCTCCGTTTAGGT 57.467 45.455 0.00 0.00 41.99 3.08
4027 4087 5.452917 CCAAACTATACTCCCTCCGTTTAGG 60.453 48.000 0.00 0.00 42.97 2.69
4028 4088 5.128335 ACCAAACTATACTCCCTCCGTTTAG 59.872 44.000 0.00 0.00 0.00 1.85
4029 4089 5.025453 ACCAAACTATACTCCCTCCGTTTA 58.975 41.667 0.00 0.00 0.00 2.01
4030 4090 3.842436 ACCAAACTATACTCCCTCCGTTT 59.158 43.478 0.00 0.00 0.00 3.60
4031 4091 3.447950 ACCAAACTATACTCCCTCCGTT 58.552 45.455 0.00 0.00 0.00 4.44
4032 4092 3.029570 GACCAAACTATACTCCCTCCGT 58.970 50.000 0.00 0.00 0.00 4.69
4033 4093 3.028850 TGACCAAACTATACTCCCTCCG 58.971 50.000 0.00 0.00 0.00 4.63
4034 4094 5.104485 ACAATGACCAAACTATACTCCCTCC 60.104 44.000 0.00 0.00 0.00 4.30
4035 4095 5.990668 ACAATGACCAAACTATACTCCCTC 58.009 41.667 0.00 0.00 0.00 4.30
4036 4096 6.388619 AACAATGACCAAACTATACTCCCT 57.611 37.500 0.00 0.00 0.00 4.20
4037 4097 7.462571 AAAACAATGACCAAACTATACTCCC 57.537 36.000 0.00 0.00 0.00 4.30
4038 4098 8.357402 ACAAAAACAATGACCAAACTATACTCC 58.643 33.333 0.00 0.00 0.00 3.85
4039 4099 9.394477 GACAAAAACAATGACCAAACTATACTC 57.606 33.333 0.00 0.00 0.00 2.59
4040 4100 9.131791 AGACAAAAACAATGACCAAACTATACT 57.868 29.630 0.00 0.00 0.00 2.12
4041 4101 9.394477 GAGACAAAAACAATGACCAAACTATAC 57.606 33.333 0.00 0.00 0.00 1.47
4042 4102 9.349713 AGAGACAAAAACAATGACCAAACTATA 57.650 29.630 0.00 0.00 0.00 1.31
4043 4103 8.237811 AGAGACAAAAACAATGACCAAACTAT 57.762 30.769 0.00 0.00 0.00 2.12
4050 4110 6.099341 ACACAAAGAGACAAAAACAATGACC 58.901 36.000 0.00 0.00 0.00 4.02
4140 4200 2.486592 GGAAACCGGTGTCTTACAATGG 59.513 50.000 24.02 0.00 32.64 3.16
4153 4217 1.199097 CCATGAAACGAAGGAAACCGG 59.801 52.381 0.00 0.00 0.00 5.28
4275 4341 4.521146 ACAAATACTCCCTCTGCAATGAG 58.479 43.478 0.00 0.00 0.00 2.90
4276 4342 4.574674 ACAAATACTCCCTCTGCAATGA 57.425 40.909 0.00 0.00 0.00 2.57
4278 4344 7.284034 CAGATAAACAAATACTCCCTCTGCAAT 59.716 37.037 0.00 0.00 0.00 3.56
4279 4345 6.599244 CAGATAAACAAATACTCCCTCTGCAA 59.401 38.462 0.00 0.00 0.00 4.08
4280 4346 6.070251 TCAGATAAACAAATACTCCCTCTGCA 60.070 38.462 0.00 0.00 0.00 4.41
4281 4347 6.258947 GTCAGATAAACAAATACTCCCTCTGC 59.741 42.308 0.00 0.00 0.00 4.26
4282 4348 6.763610 GGTCAGATAAACAAATACTCCCTCTG 59.236 42.308 0.00 0.00 0.00 3.35
4285 4351 6.893020 AGGTCAGATAAACAAATACTCCCT 57.107 37.500 0.00 0.00 0.00 4.20
4286 4352 7.339482 AGAAGGTCAGATAAACAAATACTCCC 58.661 38.462 0.00 0.00 0.00 4.30
4734 4814 3.766545 TCATCAAGAAAAGGGGGAGTTG 58.233 45.455 0.00 0.00 0.00 3.16
4735 4815 4.469469 TTCATCAAGAAAAGGGGGAGTT 57.531 40.909 0.00 0.00 32.05 3.01
4736 4816 4.469469 TTTCATCAAGAAAAGGGGGAGT 57.531 40.909 0.00 0.00 43.00 3.85
4761 5268 8.889717 CCCGAGTATTGTCAATTAAAATACTGT 58.110 33.333 17.64 0.00 43.66 3.55
4824 5332 3.112263 AGGGTGCTATGTAAGTAAGGCA 58.888 45.455 0.00 0.00 0.00 4.75
4964 6306 8.998377 GCATTTTTAGGTGTCAATGGTTTATTT 58.002 29.630 0.00 0.00 0.00 1.40
5066 11189 8.616076 GTTATCTCTGGAGTCAATTTACCATTG 58.384 37.037 0.00 0.00 0.00 2.82
5067 11190 7.775561 GGTTATCTCTGGAGTCAATTTACCATT 59.224 37.037 0.00 0.00 0.00 3.16
5140 11264 2.615912 GAGCCGGAAATTCAGAATCCAG 59.384 50.000 5.05 0.00 32.58 3.86
5177 11301 6.283694 TGTAGCATCTAAGAACCATGATGAC 58.716 40.000 0.00 0.00 38.72 3.06
5224 11348 6.205784 TGCTGAAAAGAAAAACAATACGGAG 58.794 36.000 0.00 0.00 0.00 4.63
5279 11409 4.020839 TCAACTCTCAGAAGCACATCATCA 60.021 41.667 0.00 0.00 0.00 3.07
5309 11439 0.107945 GCAGCTCATCGACTTCCCTT 60.108 55.000 0.00 0.00 0.00 3.95
5347 11477 2.554032 TGCAGCTTACTCTTTTCTTGCC 59.446 45.455 0.00 0.00 0.00 4.52
5785 11925 1.146263 GCACCGGAATACCCTCCTG 59.854 63.158 9.46 0.00 32.82 3.86
5818 11958 6.435164 ACAAATATTTAGGAATGGAGGCAGT 58.565 36.000 0.00 0.00 0.00 4.40
5819 11959 6.774656 AGACAAATATTTAGGAATGGAGGCAG 59.225 38.462 0.00 0.00 0.00 4.85
5820 11960 6.672593 AGACAAATATTTAGGAATGGAGGCA 58.327 36.000 0.00 0.00 0.00 4.75
5821 11961 7.588497 AAGACAAATATTTAGGAATGGAGGC 57.412 36.000 0.00 0.00 0.00 4.70
5822 11962 9.413734 AGAAAGACAAATATTTAGGAATGGAGG 57.586 33.333 0.00 0.00 0.00 4.30
5827 11967 9.920946 TGCCTAGAAAGACAAATATTTAGGAAT 57.079 29.630 11.79 0.00 0.00 3.01
5828 11968 9.920946 ATGCCTAGAAAGACAAATATTTAGGAA 57.079 29.630 11.79 3.74 0.00 3.36
5829 11969 9.920946 AATGCCTAGAAAGACAAATATTTAGGA 57.079 29.630 11.79 1.09 0.00 2.94
5836 11976 9.859427 CATTTGAAATGCCTAGAAAGACAAATA 57.141 29.630 4.82 0.00 34.96 1.40
5837 11977 7.820872 CCATTTGAAATGCCTAGAAAGACAAAT 59.179 33.333 12.26 0.00 36.38 2.32
5838 11978 7.153985 CCATTTGAAATGCCTAGAAAGACAAA 58.846 34.615 12.26 0.00 0.00 2.83
5839 11979 6.267471 ACCATTTGAAATGCCTAGAAAGACAA 59.733 34.615 12.26 0.00 0.00 3.18
5840 11980 5.774690 ACCATTTGAAATGCCTAGAAAGACA 59.225 36.000 12.26 0.00 0.00 3.41
5841 11981 6.272822 ACCATTTGAAATGCCTAGAAAGAC 57.727 37.500 12.26 0.00 0.00 3.01
5842 11982 6.916360 AACCATTTGAAATGCCTAGAAAGA 57.084 33.333 12.26 0.00 0.00 2.52
5843 11983 7.601856 TGTAACCATTTGAAATGCCTAGAAAG 58.398 34.615 12.26 0.00 0.00 2.62
5844 11984 7.531857 TGTAACCATTTGAAATGCCTAGAAA 57.468 32.000 12.26 0.00 0.00 2.52
5845 11985 7.014711 TGTTGTAACCATTTGAAATGCCTAGAA 59.985 33.333 12.26 7.45 0.00 2.10
5846 11986 6.491745 TGTTGTAACCATTTGAAATGCCTAGA 59.508 34.615 12.26 2.09 0.00 2.43
5847 11987 6.686630 TGTTGTAACCATTTGAAATGCCTAG 58.313 36.000 12.26 1.78 0.00 3.02
5848 11988 6.656632 TGTTGTAACCATTTGAAATGCCTA 57.343 33.333 12.26 3.23 0.00 3.93
5849 11989 5.543507 TGTTGTAACCATTTGAAATGCCT 57.456 34.783 12.26 4.13 0.00 4.75
5850 11990 6.870965 TGTATGTTGTAACCATTTGAAATGCC 59.129 34.615 12.26 1.21 0.00 4.40
5851 11991 7.812191 TCTGTATGTTGTAACCATTTGAAATGC 59.188 33.333 12.26 0.00 0.00 3.56
5852 11992 9.859427 ATCTGTATGTTGTAACCATTTGAAATG 57.141 29.630 10.84 10.84 0.00 2.32
5853 11993 9.859427 CATCTGTATGTTGTAACCATTTGAAAT 57.141 29.630 0.00 0.00 0.00 2.17
5854 11994 8.855110 ACATCTGTATGTTGTAACCATTTGAAA 58.145 29.630 0.00 0.00 44.07 2.69
5855 11995 8.402798 ACATCTGTATGTTGTAACCATTTGAA 57.597 30.769 0.00 0.00 44.07 2.69
5856 11996 7.994425 ACATCTGTATGTTGTAACCATTTGA 57.006 32.000 0.00 0.00 44.07 2.69
5893 12033 9.255304 GCAAAATGGTTGAATCTACAGTTTAAA 57.745 29.630 0.00 0.00 31.09 1.52
5894 12034 8.637986 AGCAAAATGGTTGAATCTACAGTTTAA 58.362 29.630 0.00 0.00 31.09 1.52
5895 12035 8.177119 AGCAAAATGGTTGAATCTACAGTTTA 57.823 30.769 0.00 0.00 31.09 2.01
5896 12036 7.054491 AGCAAAATGGTTGAATCTACAGTTT 57.946 32.000 0.00 0.00 32.22 2.66
5897 12037 6.655078 AGCAAAATGGTTGAATCTACAGTT 57.345 33.333 0.00 0.00 0.00 3.16
5898 12038 6.655078 AAGCAAAATGGTTGAATCTACAGT 57.345 33.333 0.00 0.00 36.63 3.55
5899 12039 6.925165 ACAAAGCAAAATGGTTGAATCTACAG 59.075 34.615 0.00 0.00 38.20 2.74
5900 12040 6.815089 ACAAAGCAAAATGGTTGAATCTACA 58.185 32.000 0.00 0.00 38.20 2.74
5901 12041 8.863049 CATACAAAGCAAAATGGTTGAATCTAC 58.137 33.333 0.00 0.00 38.20 2.59
5902 12042 8.584157 ACATACAAAGCAAAATGGTTGAATCTA 58.416 29.630 0.00 0.00 38.20 1.98
5903 12043 7.444299 ACATACAAAGCAAAATGGTTGAATCT 58.556 30.769 0.00 0.00 38.20 2.40
5904 12044 7.656707 ACATACAAAGCAAAATGGTTGAATC 57.343 32.000 0.00 0.00 38.20 2.52
5905 12045 8.367156 ACTACATACAAAGCAAAATGGTTGAAT 58.633 29.630 0.00 0.00 38.20 2.57
5906 12046 7.721402 ACTACATACAAAGCAAAATGGTTGAA 58.279 30.769 0.00 0.00 38.20 2.69
5907 12047 7.013750 TGACTACATACAAAGCAAAATGGTTGA 59.986 33.333 0.00 0.00 38.20 3.18
5908 12048 7.114811 GTGACTACATACAAAGCAAAATGGTTG 59.885 37.037 0.00 0.00 38.20 3.77
5909 12049 7.014230 AGTGACTACATACAAAGCAAAATGGTT 59.986 33.333 0.00 0.00 40.14 3.67
5910 12050 6.490040 AGTGACTACATACAAAGCAAAATGGT 59.510 34.615 0.00 0.00 0.00 3.55
5911 12051 6.913170 AGTGACTACATACAAAGCAAAATGG 58.087 36.000 0.00 0.00 0.00 3.16
5912 12052 7.862372 ACAAGTGACTACATACAAAGCAAAATG 59.138 33.333 0.00 0.00 0.00 2.32
5913 12053 7.940850 ACAAGTGACTACATACAAAGCAAAAT 58.059 30.769 0.00 0.00 0.00 1.82
5914 12054 7.328277 ACAAGTGACTACATACAAAGCAAAA 57.672 32.000 0.00 0.00 0.00 2.44
5915 12055 6.935741 ACAAGTGACTACATACAAAGCAAA 57.064 33.333 0.00 0.00 0.00 3.68
5916 12056 6.540551 TCAACAAGTGACTACATACAAAGCAA 59.459 34.615 0.00 0.00 0.00 3.91
5917 12057 6.052360 TCAACAAGTGACTACATACAAAGCA 58.948 36.000 0.00 0.00 0.00 3.91
5918 12058 6.539649 TCAACAAGTGACTACATACAAAGC 57.460 37.500 0.00 0.00 0.00 3.51
5931 12071 9.996554 TGTCTTTCTAAAGATATCAACAAGTGA 57.003 29.630 8.31 0.00 45.83 3.41
5947 12087 9.947433 TCCGTTCCTAAATATTTGTCTTTCTAA 57.053 29.630 11.05 0.00 0.00 2.10
5948 12088 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
5949 12089 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
5950 12090 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
5951 12091 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
5952 12092 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
5953 12093 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
5954 12094 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
5955 12095 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
5956 12096 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
5957 12097 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
5958 12098 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
5959 12099 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
5960 12100 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
5961 12101 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
5962 12102 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
5963 12103 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
5964 12104 2.731572 CTTGTACTCCCTCCGTTCCTA 58.268 52.381 0.00 0.00 0.00 2.94
5965 12105 1.558233 CTTGTACTCCCTCCGTTCCT 58.442 55.000 0.00 0.00 0.00 3.36
5966 12106 0.108281 GCTTGTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
5967 12107 0.108281 GGCTTGTACTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
5968 12108 0.834687 TGGCTTGTACTCCCTCCGTT 60.835 55.000 0.00 0.00 0.00 4.44
5969 12109 1.229082 TGGCTTGTACTCCCTCCGT 60.229 57.895 0.00 0.00 0.00 4.69
5970 12110 1.517832 CTGGCTTGTACTCCCTCCG 59.482 63.158 0.00 0.00 0.00 4.63
5971 12111 1.222113 GCTGGCTTGTACTCCCTCC 59.778 63.158 0.00 0.00 0.00 4.30
5972 12112 0.324943 TTGCTGGCTTGTACTCCCTC 59.675 55.000 0.00 0.00 0.00 4.30
5973 12113 0.326264 CTTGCTGGCTTGTACTCCCT 59.674 55.000 0.00 0.00 0.00 4.20
5974 12114 1.308783 GCTTGCTGGCTTGTACTCCC 61.309 60.000 0.00 0.00 0.00 4.30
5975 12115 0.322008 AGCTTGCTGGCTTGTACTCC 60.322 55.000 0.00 0.00 39.86 3.85
5976 12116 1.082690 GAGCTTGCTGGCTTGTACTC 58.917 55.000 0.00 0.00 43.20 2.59
6188 12328 4.158764 ACAAGATGTACAGTGTCCTAGCTC 59.841 45.833 0.00 0.00 0.00 4.09
6208 12348 2.153645 CAGTAAGCACATGGAGCACAA 58.846 47.619 13.81 0.00 0.00 3.33
6394 12549 3.119990 GCCTAGATCTACTGTCGCTCATC 60.120 52.174 0.00 0.00 0.00 2.92
6422 12577 3.685139 ATAACGCCTTCCGATGATCAT 57.315 42.857 8.25 8.25 41.02 2.45
6428 12583 2.104281 AGCCTAAATAACGCCTTCCGAT 59.896 45.455 0.00 0.00 41.02 4.18
6436 12591 4.131596 TGTATCCCAAGCCTAAATAACGC 58.868 43.478 0.00 0.00 0.00 4.84
6692 12849 1.202758 ACCTTGTCCGCAACATCAGAA 60.203 47.619 0.00 0.00 37.82 3.02
6695 12852 1.514678 GCACCTTGTCCGCAACATCA 61.515 55.000 0.00 0.00 37.82 3.07



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.