Multiple sequence alignment - TraesCS1B01G256900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G256900 chr1B 100.000 4109 0 0 1 4109 452509645 452505537 0.000000e+00 7589
1 TraesCS1B01G256900 chr1B 87.179 780 90 7 3 779 685172126 685171354 0.000000e+00 878
2 TraesCS1B01G256900 chr1B 86.207 783 94 12 3 778 336367808 336367033 0.000000e+00 835
3 TraesCS1B01G256900 chr1B 96.516 488 15 2 3624 4109 630876347 630875860 0.000000e+00 806
4 TraesCS1B01G256900 chr1B 95.287 488 20 1 3622 4109 687675798 687675314 0.000000e+00 771
5 TraesCS1B01G256900 chr1B 85.714 483 59 7 1985 2462 70329009 70329486 6.130000e-138 501
6 TraesCS1B01G256900 chr1B 78.261 345 48 18 2748 3086 70329494 70329817 3.240000e-46 196
7 TraesCS1B01G256900 chr1A 92.348 1699 99 23 783 2471 435090213 435088536 0.000000e+00 2388
8 TraesCS1B01G256900 chr1A 94.711 605 28 2 2612 3216 435088471 435087871 0.000000e+00 937
9 TraesCS1B01G256900 chr1A 91.630 227 12 4 3215 3441 435087792 435087573 1.430000e-79 307
10 TraesCS1B01G256900 chr1A 94.286 175 7 3 3450 3623 49302068 49302240 8.760000e-67 265
11 TraesCS1B01G256900 chr1A 88.321 137 13 1 2950 3086 49288211 49288344 1.180000e-35 161
12 TraesCS1B01G256900 chr6B 90.244 779 62 10 3 779 230765956 230765190 0.000000e+00 1005
13 TraesCS1B01G256900 chr6B 95.697 488 19 2 3623 4109 530366973 530366487 0.000000e+00 784
14 TraesCS1B01G256900 chr7D 89.567 786 68 13 3 783 64004891 64005667 0.000000e+00 985
15 TraesCS1B01G256900 chr7D 93.220 177 10 2 3450 3625 242780721 242780896 4.070000e-65 259
16 TraesCS1B01G256900 chr5D 89.413 784 67 12 3 776 133863228 133864005 0.000000e+00 974
17 TraesCS1B01G256900 chr1D 89.060 777 74 8 3 778 454506895 454506129 0.000000e+00 953
18 TraesCS1B01G256900 chr1D 85.593 472 59 6 1985 2453 49942634 49943099 1.720000e-133 486
19 TraesCS1B01G256900 chr1D 80.645 248 31 11 2840 3087 49943257 49943487 4.220000e-40 176
20 TraesCS1B01G256900 chr2B 88.447 779 72 11 3 779 216716469 216715707 0.000000e+00 924
21 TraesCS1B01G256900 chr2B 95.050 505 21 4 3606 4109 711356998 711357499 0.000000e+00 791
22 TraesCS1B01G256900 chr2B 95.483 487 21 1 3624 4109 488586052 488585566 0.000000e+00 776
23 TraesCS1B01G256900 chr2B 93.443 183 10 2 3443 3625 571153497 571153317 1.880000e-68 270
24 TraesCS1B01G256900 chr7B 86.912 787 84 13 3 779 417060339 417059562 0.000000e+00 865
25 TraesCS1B01G256900 chr7B 87.206 766 84 8 13 776 202509642 202508889 0.000000e+00 859
26 TraesCS1B01G256900 chr7B 94.828 174 9 0 3450 3623 367757165 367756992 5.230000e-69 272
27 TraesCS1B01G256900 chr4B 95.679 486 20 1 3624 4108 7861894 7862379 0.000000e+00 780
28 TraesCS1B01G256900 chr4B 95.287 488 20 3 3624 4109 74768961 74768475 0.000000e+00 771
29 TraesCS1B01G256900 chr3B 95.483 487 21 1 3624 4109 148708863 148709349 0.000000e+00 776
30 TraesCS1B01G256900 chr3B 95.277 487 21 2 3624 4109 493197435 493196950 0.000000e+00 771
31 TraesCS1B01G256900 chr3B 93.855 179 11 0 3445 3623 5595837 5595659 1.880000e-68 270
32 TraesCS1B01G256900 chr3B 93.855 179 11 0 3445 3623 5735596 5735774 1.880000e-68 270
33 TraesCS1B01G256900 chr6A 95.238 168 5 3 3457 3623 419774082 419773917 3.150000e-66 263
34 TraesCS1B01G256900 chr5B 94.220 173 9 1 3451 3623 685093727 685093898 3.150000e-66 263
35 TraesCS1B01G256900 chr7A 93.678 174 10 1 3450 3623 427516748 427516576 4.070000e-65 259


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G256900 chr1B 452505537 452509645 4108 True 7589.000000 7589 100.000000 1 4109 1 chr1B.!!$R2 4108
1 TraesCS1B01G256900 chr1B 685171354 685172126 772 True 878.000000 878 87.179000 3 779 1 chr1B.!!$R4 776
2 TraesCS1B01G256900 chr1B 336367033 336367808 775 True 835.000000 835 86.207000 3 778 1 chr1B.!!$R1 775
3 TraesCS1B01G256900 chr1B 70329009 70329817 808 False 348.500000 501 81.987500 1985 3086 2 chr1B.!!$F1 1101
4 TraesCS1B01G256900 chr1A 435087573 435090213 2640 True 1210.666667 2388 92.896333 783 3441 3 chr1A.!!$R1 2658
5 TraesCS1B01G256900 chr6B 230765190 230765956 766 True 1005.000000 1005 90.244000 3 779 1 chr6B.!!$R1 776
6 TraesCS1B01G256900 chr7D 64004891 64005667 776 False 985.000000 985 89.567000 3 783 1 chr7D.!!$F1 780
7 TraesCS1B01G256900 chr5D 133863228 133864005 777 False 974.000000 974 89.413000 3 776 1 chr5D.!!$F1 773
8 TraesCS1B01G256900 chr1D 454506129 454506895 766 True 953.000000 953 89.060000 3 778 1 chr1D.!!$R1 775
9 TraesCS1B01G256900 chr1D 49942634 49943487 853 False 331.000000 486 83.119000 1985 3087 2 chr1D.!!$F1 1102
10 TraesCS1B01G256900 chr2B 216715707 216716469 762 True 924.000000 924 88.447000 3 779 1 chr2B.!!$R1 776
11 TraesCS1B01G256900 chr2B 711356998 711357499 501 False 791.000000 791 95.050000 3606 4109 1 chr2B.!!$F1 503
12 TraesCS1B01G256900 chr7B 417059562 417060339 777 True 865.000000 865 86.912000 3 779 1 chr7B.!!$R3 776
13 TraesCS1B01G256900 chr7B 202508889 202509642 753 True 859.000000 859 87.206000 13 776 1 chr7B.!!$R1 763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 785 0.449388 CTGCTCTTTTTAGGCAGGCG 59.551 55.0 6.31 0.00 46.51 5.52 F
779 820 0.599728 CCGCTGGAGATGCTCTTAGC 60.600 60.0 11.46 11.46 42.82 3.09 F
1369 1410 0.605319 TTGGTTGACCTCGTGGATGC 60.605 55.0 11.17 0.00 36.82 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2145 2191 0.033011 ACTCCAGGATAGCGGTCTGT 60.033 55.000 0.00 0.00 0.00 3.41 R
2730 2808 1.129437 GTTCACGCTTGAGCTCAATCC 59.871 52.381 28.57 20.34 39.32 3.01 R
3143 3280 0.523968 CACGGGCGAATGCATTTCTG 60.524 55.000 14.33 13.24 45.35 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
212 213 4.180946 CGACGAGTCCGCCCTCAG 62.181 72.222 0.00 0.00 39.95 3.35
382 389 2.202557 CGTCATGCGCTGTCGGTA 60.203 61.111 9.73 0.00 33.55 4.02
545 576 7.028962 AGGCGTTTTAGTTCGTTTTTAAGTTT 58.971 30.769 0.00 0.00 0.00 2.66
586 620 6.752815 ACGTTTTTGTACAAATTTGGACGAAT 59.247 30.769 28.99 16.21 45.13 3.34
601 636 2.277084 ACGAATAATGGCCGAGTTCAC 58.723 47.619 0.00 0.00 0.00 3.18
611 646 0.934496 CCGAGTTCACGCAAAAGTCA 59.066 50.000 0.00 0.00 0.00 3.41
683 722 1.184970 TGGGCGTGTGACTGAGATCA 61.185 55.000 0.00 0.00 0.00 2.92
697 736 1.278127 GAGATCAAACCGAACCCCAGA 59.722 52.381 0.00 0.00 0.00 3.86
738 777 3.264193 TCATCTCCAGGCTGCTCTTTTTA 59.736 43.478 9.56 0.00 0.00 1.52
742 781 1.538047 CAGGCTGCTCTTTTTAGGCA 58.462 50.000 0.00 0.00 39.24 4.75
746 785 0.449388 CTGCTCTTTTTAGGCAGGCG 59.551 55.000 6.31 0.00 46.51 5.52
779 820 0.599728 CCGCTGGAGATGCTCTTAGC 60.600 60.000 11.46 11.46 42.82 3.09
781 822 1.202510 CGCTGGAGATGCTCTTAGCTT 60.203 52.381 16.14 0.00 42.97 3.74
825 866 1.145325 ACTCGATTCCTACCGATCCCT 59.855 52.381 0.00 0.00 34.08 4.20
826 867 1.813786 CTCGATTCCTACCGATCCCTC 59.186 57.143 0.00 0.00 34.08 4.30
827 868 1.424302 TCGATTCCTACCGATCCCTCT 59.576 52.381 0.00 0.00 0.00 3.69
828 869 2.641321 TCGATTCCTACCGATCCCTCTA 59.359 50.000 0.00 0.00 0.00 2.43
829 870 3.266254 TCGATTCCTACCGATCCCTCTAT 59.734 47.826 0.00 0.00 0.00 1.98
830 871 4.017808 CGATTCCTACCGATCCCTCTATT 58.982 47.826 0.00 0.00 0.00 1.73
831 872 4.463186 CGATTCCTACCGATCCCTCTATTT 59.537 45.833 0.00 0.00 0.00 1.40
832 873 5.393243 CGATTCCTACCGATCCCTCTATTTC 60.393 48.000 0.00 0.00 0.00 2.17
833 874 4.743705 TCCTACCGATCCCTCTATTTCT 57.256 45.455 0.00 0.00 0.00 2.52
838 879 3.570550 ACCGATCCCTCTATTTCTCTTCG 59.429 47.826 0.00 0.00 0.00 3.79
1015 1056 2.409870 CCCATGGCTTCTGTTCCGC 61.410 63.158 6.09 0.00 0.00 5.54
1022 1063 1.371183 CTTCTGTTCCGCCACTCCA 59.629 57.895 0.00 0.00 0.00 3.86
1077 1118 2.370189 AGAGGGTGTTCAGGAAGTTCAG 59.630 50.000 5.01 0.00 0.00 3.02
1237 1278 3.490348 CCAGGGAAACAGAAATCAGTGT 58.510 45.455 0.00 0.00 0.00 3.55
1278 1319 3.448686 CAGAAAGGTATACCGCAGACTG 58.551 50.000 16.31 16.44 42.08 3.51
1292 1333 2.284684 GCAGACTGCAGATGAATTCGAG 59.715 50.000 23.35 5.87 44.26 4.04
1361 1402 8.293699 AGTATATGGAATTTTTGGTTGACCTC 57.706 34.615 1.34 0.00 36.82 3.85
1363 1404 3.292460 TGGAATTTTTGGTTGACCTCGT 58.708 40.909 1.34 0.00 36.82 4.18
1364 1405 3.067461 TGGAATTTTTGGTTGACCTCGTG 59.933 43.478 1.34 0.00 36.82 4.35
1369 1410 0.605319 TTGGTTGACCTCGTGGATGC 60.605 55.000 11.17 0.00 36.82 3.91
1373 1414 0.684535 TTGACCTCGTGGATGCTGAA 59.315 50.000 11.17 0.00 37.04 3.02
1391 1432 2.163412 TGAAAAAGCACGTTCAGTTGCT 59.837 40.909 0.00 0.00 38.31 3.91
1403 1444 2.494059 TCAGTTGCTGAAAGGTAGTGC 58.506 47.619 0.00 0.00 37.57 4.40
1405 1451 1.202651 AGTTGCTGAAAGGTAGTGCGT 60.203 47.619 0.00 0.00 0.00 5.24
1407 1453 2.074547 TGCTGAAAGGTAGTGCGTAC 57.925 50.000 0.00 0.00 0.00 3.67
1411 1457 3.650139 CTGAAAGGTAGTGCGTACAAGT 58.350 45.455 6.38 0.00 32.62 3.16
1418 1464 5.348986 AGGTAGTGCGTACAAGTATCATTG 58.651 41.667 6.38 0.00 32.62 2.82
1422 1468 5.927030 AGTGCGTACAAGTATCATTGTTTG 58.073 37.500 6.38 0.00 40.47 2.93
1424 1470 4.095610 GCGTACAAGTATCATTGTTTGGC 58.904 43.478 0.00 0.00 40.47 4.52
1427 1473 4.419522 ACAAGTATCATTGTTTGGCGAC 57.580 40.909 0.00 0.00 40.47 5.19
1431 1477 5.339008 AGTATCATTGTTTGGCGACTCTA 57.661 39.130 0.00 0.00 0.00 2.43
1432 1478 5.918608 AGTATCATTGTTTGGCGACTCTAT 58.081 37.500 0.00 0.00 0.00 1.98
1436 1482 4.092821 TCATTGTTTGGCGACTCTATTTCG 59.907 41.667 0.00 0.00 39.56 3.46
1438 1484 3.250744 TGTTTGGCGACTCTATTTCGAG 58.749 45.455 0.00 0.00 38.85 4.04
1439 1485 3.251571 GTTTGGCGACTCTATTTCGAGT 58.748 45.455 0.00 0.00 46.39 4.18
1441 1487 4.707030 TTGGCGACTCTATTTCGAGTAA 57.293 40.909 0.00 0.00 43.91 2.24
1444 1490 3.181493 GGCGACTCTATTTCGAGTAACCA 60.181 47.826 0.00 0.00 43.91 3.67
1445 1491 4.036352 GCGACTCTATTTCGAGTAACCAG 58.964 47.826 0.00 0.00 43.91 4.00
1446 1492 4.438472 GCGACTCTATTTCGAGTAACCAGT 60.438 45.833 0.00 0.00 43.91 4.00
1469 1515 6.270231 AGTGGTGATAGGAAGTTACTGTTCTT 59.730 38.462 0.00 0.00 0.00 2.52
1492 1538 9.263538 TCTTGAAGAACAAAATCCATGAAAATG 57.736 29.630 0.00 0.00 38.08 2.32
1497 1543 8.961294 AGAACAAAATCCATGAAAATGTTCAA 57.039 26.923 21.89 0.00 46.66 2.69
1501 1547 9.339850 ACAAAATCCATGAAAATGTTCAATTCA 57.660 25.926 1.55 6.78 46.66 2.57
1543 1589 8.737168 TGCAAAGACATCTAGTTATATGCTTT 57.263 30.769 0.00 0.00 33.62 3.51
1544 1590 8.830580 TGCAAAGACATCTAGTTATATGCTTTC 58.169 33.333 0.00 0.00 32.34 2.62
1560 1606 5.717038 TGCTTTCTTTGCTAAAGTTTTGC 57.283 34.783 14.11 14.11 39.52 3.68
1564 1610 7.710475 TGCTTTCTTTGCTAAAGTTTTGCTTAT 59.290 29.630 20.12 0.00 39.52 1.73
1577 1623 9.986833 AAAGTTTTGCTTATTTCAAACATGTTC 57.013 25.926 12.39 0.00 36.17 3.18
1578 1624 8.141835 AGTTTTGCTTATTTCAAACATGTTCC 57.858 30.769 12.39 0.00 33.66 3.62
1579 1625 7.768120 AGTTTTGCTTATTTCAAACATGTTCCA 59.232 29.630 12.39 0.00 33.66 3.53
1584 1630 7.384660 TGCTTATTTCAAACATGTTCCATGAAC 59.615 33.333 19.09 10.89 42.26 3.18
1587 1633 5.850557 TTCAAACATGTTCCATGAACTGT 57.149 34.783 16.56 4.97 42.39 3.55
1592 1638 4.914983 ACATGTTCCATGAACTGTCATCT 58.085 39.130 10.96 0.00 42.88 2.90
1597 1643 8.464404 CATGTTCCATGAACTGTCATCTTAATT 58.536 33.333 8.30 0.00 42.88 1.40
1601 1647 8.272545 TCCATGAACTGTCATCTTAATTCAAG 57.727 34.615 0.00 0.00 42.88 3.02
1607 1653 5.940470 ACTGTCATCTTAATTCAAGTGTCCC 59.060 40.000 0.00 0.00 35.58 4.46
1609 1655 6.173339 TGTCATCTTAATTCAAGTGTCCCTC 58.827 40.000 0.00 0.00 35.58 4.30
1610 1656 5.292101 GTCATCTTAATTCAAGTGTCCCTCG 59.708 44.000 0.00 0.00 35.58 4.63
1611 1657 4.884668 TCTTAATTCAAGTGTCCCTCGT 57.115 40.909 0.00 0.00 35.58 4.18
1612 1658 4.566004 TCTTAATTCAAGTGTCCCTCGTG 58.434 43.478 0.00 0.00 35.58 4.35
1615 1661 2.234300 TTCAAGTGTCCCTCGTGTTC 57.766 50.000 0.00 0.00 0.00 3.18
1616 1662 1.116308 TCAAGTGTCCCTCGTGTTCA 58.884 50.000 0.00 0.00 0.00 3.18
1643 1689 6.691508 AGGGCTTTGAGAACAATAAACATTC 58.308 36.000 0.00 0.00 35.85 2.67
1726 1772 1.893801 AGTCCACGAGAGGTAAGTTGG 59.106 52.381 0.00 0.00 0.00 3.77
1750 1796 7.176515 TGGAACTTGCAAATGACACTACATTAT 59.823 33.333 0.00 0.00 39.19 1.28
1755 1801 8.741101 TTGCAAATGACACTACATTATGTTTC 57.259 30.769 2.23 0.00 39.19 2.78
1762 1808 8.547967 TGACACTACATTATGTTTCCTTCTTC 57.452 34.615 2.23 0.00 0.00 2.87
1775 1821 2.183679 CCTTCTTCCTGCTGTCCTAGT 58.816 52.381 0.00 0.00 0.00 2.57
1786 1832 5.536538 CCTGCTGTCCTAGTTGATACTGATA 59.463 44.000 0.00 0.00 35.78 2.15
1826 1872 4.636249 AGGATGCCGTCAAGAAGATATTC 58.364 43.478 0.00 0.00 0.00 1.75
1836 1882 5.882557 GTCAAGAAGATATTCCAAAGAGCCA 59.117 40.000 0.00 0.00 0.00 4.75
1853 1899 2.174210 AGCCATGCAGTATTGTGATCCT 59.826 45.455 0.00 0.00 0.00 3.24
1955 2001 3.903714 TGACCAGAAGATTCAGGACTTCA 59.096 43.478 10.63 2.19 43.13 3.02
1957 2003 3.648067 ACCAGAAGATTCAGGACTTCACA 59.352 43.478 10.63 0.00 43.13 3.58
2000 2046 5.771469 TGTTGTCTGTATTTGGAGCAAATG 58.229 37.500 0.00 0.00 42.91 2.32
2017 2063 4.672542 GCAAATGTATGACTTGCATGACGT 60.673 41.667 6.60 4.37 43.89 4.34
2062 2108 5.403166 CGCATTCAATTTTCTCTCAAGCAAA 59.597 36.000 0.00 0.00 0.00 3.68
2064 2110 6.423001 GCATTCAATTTTCTCTCAAGCAAAGT 59.577 34.615 0.00 0.00 0.00 2.66
2145 2191 4.332543 CGCAAGCATATAAGGTTTCTCACA 59.667 41.667 0.00 0.00 0.00 3.58
2467 2516 7.476540 TTCTTTGTGTATCCTGCTCTTACTA 57.523 36.000 0.00 0.00 0.00 1.82
2468 2517 6.864342 TCTTTGTGTATCCTGCTCTTACTAC 58.136 40.000 0.00 0.00 0.00 2.73
2469 2518 6.663953 TCTTTGTGTATCCTGCTCTTACTACT 59.336 38.462 0.00 0.00 0.00 2.57
2470 2519 7.832685 TCTTTGTGTATCCTGCTCTTACTACTA 59.167 37.037 0.00 0.00 0.00 1.82
2471 2520 6.939132 TGTGTATCCTGCTCTTACTACTAC 57.061 41.667 0.00 0.00 0.00 2.73
2472 2521 5.826737 TGTGTATCCTGCTCTTACTACTACC 59.173 44.000 0.00 0.00 0.00 3.18
2474 2523 6.546772 GTGTATCCTGCTCTTACTACTACCTT 59.453 42.308 0.00 0.00 0.00 3.50
2475 2524 7.068470 GTGTATCCTGCTCTTACTACTACCTTT 59.932 40.741 0.00 0.00 0.00 3.11
2476 2525 5.916661 TCCTGCTCTTACTACTACCTTTG 57.083 43.478 0.00 0.00 0.00 2.77
2477 2526 5.577100 TCCTGCTCTTACTACTACCTTTGA 58.423 41.667 0.00 0.00 0.00 2.69
2478 2527 6.014647 TCCTGCTCTTACTACTACCTTTGAA 58.985 40.000 0.00 0.00 0.00 2.69
2479 2528 6.071503 TCCTGCTCTTACTACTACCTTTGAAC 60.072 42.308 0.00 0.00 0.00 3.18
2480 2529 6.034161 TGCTCTTACTACTACCTTTGAACC 57.966 41.667 0.00 0.00 0.00 3.62
2481 2530 5.541101 TGCTCTTACTACTACCTTTGAACCA 59.459 40.000 0.00 0.00 0.00 3.67
2482 2531 6.042322 TGCTCTTACTACTACCTTTGAACCAA 59.958 38.462 0.00 0.00 0.00 3.67
2483 2532 6.932960 GCTCTTACTACTACCTTTGAACCAAA 59.067 38.462 0.00 0.00 0.00 3.28
2484 2533 7.443272 GCTCTTACTACTACCTTTGAACCAAAA 59.557 37.037 0.00 0.00 32.75 2.44
2485 2534 9.503399 CTCTTACTACTACCTTTGAACCAAAAT 57.497 33.333 0.00 0.00 32.75 1.82
2493 2542 8.943002 ACTACCTTTGAACCAAAATATAAGACG 58.057 33.333 0.00 0.00 32.75 4.18
2494 2543 7.754851 ACCTTTGAACCAAAATATAAGACGT 57.245 32.000 0.00 0.00 32.75 4.34
2495 2544 8.173542 ACCTTTGAACCAAAATATAAGACGTT 57.826 30.769 0.00 0.00 32.75 3.99
2496 2545 8.635328 ACCTTTGAACCAAAATATAAGACGTTT 58.365 29.630 0.00 0.00 32.75 3.60
2497 2546 9.471084 CCTTTGAACCAAAATATAAGACGTTTT 57.529 29.630 0.00 0.00 32.75 2.43
2501 2550 9.672086 TGAACCAAAATATAAGACGTTTTTCAG 57.328 29.630 0.00 0.00 0.00 3.02
2502 2551 9.124807 GAACCAAAATATAAGACGTTTTTCAGG 57.875 33.333 0.00 0.00 0.00 3.86
2503 2552 7.088272 ACCAAAATATAAGACGTTTTTCAGGC 58.912 34.615 0.00 0.00 0.00 4.85
2504 2553 7.039993 ACCAAAATATAAGACGTTTTTCAGGCT 60.040 33.333 0.00 0.00 0.00 4.58
2505 2554 7.273381 CCAAAATATAAGACGTTTTTCAGGCTG 59.727 37.037 8.58 8.58 0.00 4.85
2506 2555 7.681939 AAATATAAGACGTTTTTCAGGCTGA 57.318 32.000 14.43 14.43 0.00 4.26
2507 2556 7.681939 AATATAAGACGTTTTTCAGGCTGAA 57.318 32.000 25.38 25.38 34.03 3.02
2508 2557 3.692791 AAGACGTTTTTCAGGCTGAAC 57.307 42.857 28.58 17.51 35.89 3.18
2509 2558 2.919228 AGACGTTTTTCAGGCTGAACT 58.081 42.857 28.58 18.05 35.89 3.01
2510 2559 4.067972 AGACGTTTTTCAGGCTGAACTA 57.932 40.909 28.58 16.97 35.89 2.24
2511 2560 4.058817 AGACGTTTTTCAGGCTGAACTAG 58.941 43.478 28.58 20.66 35.89 2.57
2512 2561 3.805207 ACGTTTTTCAGGCTGAACTAGT 58.195 40.909 28.58 21.24 35.89 2.57
2513 2562 3.808174 ACGTTTTTCAGGCTGAACTAGTC 59.192 43.478 28.58 15.65 35.89 2.59
2514 2563 4.058817 CGTTTTTCAGGCTGAACTAGTCT 58.941 43.478 28.58 0.00 43.74 3.24
2515 2564 5.221382 ACGTTTTTCAGGCTGAACTAGTCTA 60.221 40.000 28.58 10.34 40.03 2.59
2516 2565 5.694910 CGTTTTTCAGGCTGAACTAGTCTAA 59.305 40.000 28.58 15.68 40.03 2.10
2517 2566 6.202188 CGTTTTTCAGGCTGAACTAGTCTAAA 59.798 38.462 28.58 20.18 40.03 1.85
2518 2567 7.254658 CGTTTTTCAGGCTGAACTAGTCTAAAA 60.255 37.037 28.58 19.52 40.03 1.52
2519 2568 8.403236 GTTTTTCAGGCTGAACTAGTCTAAAAA 58.597 33.333 28.58 18.87 40.03 1.94
2538 2587 4.713792 AAAATGTCTTCACAGAGGGAGT 57.286 40.909 0.00 0.00 35.41 3.85
2539 2588 5.825593 AAAATGTCTTCACAGAGGGAGTA 57.174 39.130 0.00 0.00 35.41 2.59
2540 2589 4.810191 AATGTCTTCACAGAGGGAGTAC 57.190 45.455 0.00 0.00 35.41 2.73
2541 2590 3.238788 TGTCTTCACAGAGGGAGTACA 57.761 47.619 0.00 0.00 0.00 2.90
2542 2591 3.572642 TGTCTTCACAGAGGGAGTACAA 58.427 45.455 0.00 0.00 0.00 2.41
2543 2592 4.160329 TGTCTTCACAGAGGGAGTACAAT 58.840 43.478 0.00 0.00 0.00 2.71
2544 2593 4.593206 TGTCTTCACAGAGGGAGTACAATT 59.407 41.667 0.00 0.00 0.00 2.32
2545 2594 4.932200 GTCTTCACAGAGGGAGTACAATTG 59.068 45.833 3.24 3.24 0.00 2.32
2546 2595 4.838423 TCTTCACAGAGGGAGTACAATTGA 59.162 41.667 13.59 0.00 0.00 2.57
2547 2596 5.306937 TCTTCACAGAGGGAGTACAATTGAA 59.693 40.000 13.59 0.00 0.00 2.69
2548 2597 5.762179 TCACAGAGGGAGTACAATTGAAT 57.238 39.130 13.59 0.00 0.00 2.57
2549 2598 6.867519 TCACAGAGGGAGTACAATTGAATA 57.132 37.500 13.59 0.00 0.00 1.75
2550 2599 7.252612 TCACAGAGGGAGTACAATTGAATAA 57.747 36.000 13.59 0.00 0.00 1.40
2551 2600 7.685481 TCACAGAGGGAGTACAATTGAATAAA 58.315 34.615 13.59 0.00 0.00 1.40
2552 2601 8.328758 TCACAGAGGGAGTACAATTGAATAAAT 58.671 33.333 13.59 0.00 0.00 1.40
2553 2602 9.613428 CACAGAGGGAGTACAATTGAATAAATA 57.387 33.333 13.59 0.00 0.00 1.40
2554 2603 9.838339 ACAGAGGGAGTACAATTGAATAAATAG 57.162 33.333 13.59 0.00 0.00 1.73
2555 2604 9.838339 CAGAGGGAGTACAATTGAATAAATAGT 57.162 33.333 13.59 0.00 0.00 2.12
2576 2625 9.845740 AATAGTATGAAAACCTATACATGCACA 57.154 29.630 0.00 0.00 33.30 4.57
2577 2626 9.845740 ATAGTATGAAAACCTATACATGCACAA 57.154 29.630 0.00 0.00 33.30 3.33
2585 2634 6.892658 ACCTATACATGCACAAAACTCAAA 57.107 33.333 0.00 0.00 0.00 2.69
2606 2655 9.844790 CTCAAACAGATCTATTTTTGTAATGCA 57.155 29.630 17.07 0.00 32.02 3.96
2632 2710 2.898705 CTTCTTAGCGCACTTGATCCT 58.101 47.619 11.47 0.00 0.00 3.24
2648 2726 7.761249 CACTTGATCCTTATTTCACCCATTTTC 59.239 37.037 0.00 0.00 0.00 2.29
2694 2772 8.029522 TGGAGCTTAAATCGTATAGCTAAGATG 58.970 37.037 0.00 0.00 43.57 2.90
2695 2773 7.489757 GGAGCTTAAATCGTATAGCTAAGATGG 59.510 40.741 0.00 0.00 43.57 3.51
2701 2779 3.895656 TCGTATAGCTAAGATGGCAAGGT 59.104 43.478 0.00 0.00 0.00 3.50
2709 2787 5.358160 AGCTAAGATGGCAAGGTTGTAATTC 59.642 40.000 0.00 0.00 0.00 2.17
2730 2808 5.749596 TCAGTGTATGGTTCAGTTTGTTG 57.250 39.130 0.00 0.00 0.00 3.33
2732 2810 4.578516 CAGTGTATGGTTCAGTTTGTTGGA 59.421 41.667 0.00 0.00 0.00 3.53
2733 2811 5.241506 CAGTGTATGGTTCAGTTTGTTGGAT 59.758 40.000 0.00 0.00 0.00 3.41
2753 2831 0.676184 TGAGCTCAAGCGTGAACTCT 59.324 50.000 26.16 14.08 44.20 3.24
2853 2987 9.525826 GGATATCCTGAATTATTGTCTGGAAAT 57.474 33.333 14.97 0.00 43.71 2.17
2910 3044 6.549433 ACCTGATATTTGCCATTCACAAAT 57.451 33.333 6.90 6.90 46.56 2.32
2933 3067 5.743026 TTTCGTGTACTCATTTTCAGCAA 57.257 34.783 0.00 0.00 0.00 3.91
3106 3243 2.779755 TGTGAACATGCCCTACGAAT 57.220 45.000 0.00 0.00 0.00 3.34
3107 3244 3.897141 TGTGAACATGCCCTACGAATA 57.103 42.857 0.00 0.00 0.00 1.75
3108 3245 4.209307 TGTGAACATGCCCTACGAATAA 57.791 40.909 0.00 0.00 0.00 1.40
3116 3253 2.169561 TGCCCTACGAATAAGCATGACA 59.830 45.455 0.00 0.00 0.00 3.58
3117 3254 3.202906 GCCCTACGAATAAGCATGACAA 58.797 45.455 0.00 0.00 0.00 3.18
3121 3258 5.702670 CCCTACGAATAAGCATGACAATCAT 59.297 40.000 0.00 0.00 37.65 2.45
3159 3296 0.383231 CCTCAGAAATGCATTCGCCC 59.617 55.000 13.38 2.89 43.15 6.13
3160 3297 0.028505 CTCAGAAATGCATTCGCCCG 59.971 55.000 13.38 3.12 43.15 6.13
3176 3313 2.606272 CGCCCGTGGAATAGTAAAACTC 59.394 50.000 0.00 0.00 0.00 3.01
3183 3320 6.755607 CCGTGGAATAGTAAAACTCTTAGGTC 59.244 42.308 0.00 0.00 0.00 3.85
3201 3338 7.616150 TCTTAGGTCAGCTCAGTACTTTATTCT 59.384 37.037 0.00 0.00 0.00 2.40
3228 3445 9.545105 TTTGAGAAAACTACCTCGTAAAATGTA 57.455 29.630 0.00 0.00 32.30 2.29
3250 3467 2.241176 TCTTTTGAAGGGTCCTGTGTGT 59.759 45.455 0.00 0.00 0.00 3.72
3251 3468 2.051334 TTTGAAGGGTCCTGTGTGTG 57.949 50.000 0.00 0.00 0.00 3.82
3254 3471 1.152963 AAGGGTCCTGTGTGTGTGC 60.153 57.895 0.00 0.00 0.00 4.57
3255 3472 1.920734 AAGGGTCCTGTGTGTGTGCA 61.921 55.000 0.00 0.00 0.00 4.57
3257 3474 1.518056 GGGTCCTGTGTGTGTGCATG 61.518 60.000 0.00 0.00 0.00 4.06
3258 3475 0.819259 GGTCCTGTGTGTGTGCATGT 60.819 55.000 0.00 0.00 0.00 3.21
3259 3476 0.308684 GTCCTGTGTGTGTGCATGTG 59.691 55.000 0.00 0.00 0.00 3.21
3260 3477 1.008194 CCTGTGTGTGTGCATGTGC 60.008 57.895 0.00 0.00 42.50 4.57
3281 3498 4.774726 TGCAGTTATCTCAGATCCCTATCC 59.225 45.833 0.00 0.00 31.98 2.59
3346 3563 8.000127 TGGTTAACTAACTTATTGTTGACCCTT 59.000 33.333 13.70 0.00 44.50 3.95
3381 3598 9.528018 TTGACCATCTTGTTTTCTTTTTGTATC 57.472 29.630 0.00 0.00 0.00 2.24
3393 3610 9.611284 TTTTCTTTTTGTATCGAGACATGAATG 57.389 29.630 14.51 13.20 0.00 2.67
3406 3623 6.896613 CGAGACATGAATGTTTCTTAATGACG 59.103 38.462 0.00 0.00 41.95 4.35
3443 3660 7.680442 TTTCAAATGACTAATTCGGATGTCA 57.320 32.000 0.00 0.00 42.50 3.58
3449 3666 6.471233 TGACTAATTCGGATGTCATTCTCT 57.529 37.500 0.00 0.00 34.94 3.10
3450 3667 6.878317 TGACTAATTCGGATGTCATTCTCTT 58.122 36.000 0.00 0.00 34.94 2.85
3451 3668 8.007405 TGACTAATTCGGATGTCATTCTCTTA 57.993 34.615 0.00 0.00 34.94 2.10
3452 3669 8.642432 TGACTAATTCGGATGTCATTCTCTTAT 58.358 33.333 0.00 0.00 34.94 1.73
3453 3670 9.134734 GACTAATTCGGATGTCATTCTCTTATC 57.865 37.037 0.00 0.00 0.00 1.75
3454 3671 7.810282 ACTAATTCGGATGTCATTCTCTTATCG 59.190 37.037 0.00 0.00 0.00 2.92
3455 3672 4.505313 TCGGATGTCATTCTCTTATCGG 57.495 45.455 0.00 0.00 0.00 4.18
3456 3673 4.142038 TCGGATGTCATTCTCTTATCGGA 58.858 43.478 0.00 0.00 0.00 4.55
3457 3674 4.583073 TCGGATGTCATTCTCTTATCGGAA 59.417 41.667 0.00 0.00 0.00 4.30
3458 3675 5.068591 TCGGATGTCATTCTCTTATCGGAAA 59.931 40.000 0.00 0.00 0.00 3.13
3459 3676 5.753438 CGGATGTCATTCTCTTATCGGAAAA 59.247 40.000 0.00 0.00 0.00 2.29
3460 3677 6.074088 CGGATGTCATTCTCTTATCGGAAAAG 60.074 42.308 0.00 0.00 0.00 2.27
3461 3678 6.203723 GGATGTCATTCTCTTATCGGAAAAGG 59.796 42.308 0.00 0.00 0.00 3.11
3462 3679 5.428253 TGTCATTCTCTTATCGGAAAAGGG 58.572 41.667 0.00 0.00 0.00 3.95
3463 3680 5.045869 TGTCATTCTCTTATCGGAAAAGGGT 60.046 40.000 0.00 0.00 0.00 4.34
3464 3681 5.880887 GTCATTCTCTTATCGGAAAAGGGTT 59.119 40.000 0.00 0.00 0.00 4.11
3465 3682 6.374613 GTCATTCTCTTATCGGAAAAGGGTTT 59.625 38.462 0.00 0.00 0.00 3.27
3466 3683 6.598064 TCATTCTCTTATCGGAAAAGGGTTTC 59.402 38.462 0.00 0.00 42.16 2.78
3496 3713 4.491234 TTGTATACAAAGCAACCAACCG 57.509 40.909 15.92 0.00 32.11 4.44
3497 3714 3.741249 TGTATACAAAGCAACCAACCGA 58.259 40.909 2.20 0.00 0.00 4.69
3498 3715 4.135306 TGTATACAAAGCAACCAACCGAA 58.865 39.130 2.20 0.00 0.00 4.30
3499 3716 3.636282 ATACAAAGCAACCAACCGAAC 57.364 42.857 0.00 0.00 0.00 3.95
3500 3717 0.458260 ACAAAGCAACCAACCGAACC 59.542 50.000 0.00 0.00 0.00 3.62
3501 3718 0.457851 CAAAGCAACCAACCGAACCA 59.542 50.000 0.00 0.00 0.00 3.67
3502 3719 1.068434 CAAAGCAACCAACCGAACCAT 59.932 47.619 0.00 0.00 0.00 3.55
3503 3720 2.279935 AAGCAACCAACCGAACCATA 57.720 45.000 0.00 0.00 0.00 2.74
3504 3721 2.507407 AGCAACCAACCGAACCATAT 57.493 45.000 0.00 0.00 0.00 1.78
3505 3722 3.637911 AGCAACCAACCGAACCATATA 57.362 42.857 0.00 0.00 0.00 0.86
3506 3723 4.164843 AGCAACCAACCGAACCATATAT 57.835 40.909 0.00 0.00 0.00 0.86
3507 3724 3.882888 AGCAACCAACCGAACCATATATG 59.117 43.478 5.68 5.68 0.00 1.78
3508 3725 3.880490 GCAACCAACCGAACCATATATGA 59.120 43.478 14.54 0.00 0.00 2.15
3509 3726 4.336993 GCAACCAACCGAACCATATATGAA 59.663 41.667 14.54 0.00 0.00 2.57
3510 3727 5.009610 GCAACCAACCGAACCATATATGAAT 59.990 40.000 14.54 2.20 0.00 2.57
3511 3728 6.205853 GCAACCAACCGAACCATATATGAATA 59.794 38.462 14.54 0.00 0.00 1.75
3512 3729 7.573096 GCAACCAACCGAACCATATATGAATAG 60.573 40.741 14.54 0.00 0.00 1.73
3513 3730 6.472887 ACCAACCGAACCATATATGAATAGG 58.527 40.000 14.54 13.12 0.00 2.57
3514 3731 6.043938 ACCAACCGAACCATATATGAATAGGT 59.956 38.462 14.54 13.69 0.00 3.08
3515 3732 6.371548 CCAACCGAACCATATATGAATAGGTG 59.628 42.308 14.54 7.38 31.86 4.00
3516 3733 6.681729 ACCGAACCATATATGAATAGGTGT 57.318 37.500 14.54 0.00 31.86 4.16
3517 3734 7.074653 ACCGAACCATATATGAATAGGTGTT 57.925 36.000 14.54 7.52 31.86 3.32
3518 3735 6.934645 ACCGAACCATATATGAATAGGTGTTG 59.065 38.462 14.54 0.78 31.86 3.33
3519 3736 6.371548 CCGAACCATATATGAATAGGTGTTGG 59.628 42.308 14.54 8.55 31.86 3.77
3520 3737 6.371548 CGAACCATATATGAATAGGTGTTGGG 59.628 42.308 14.54 0.00 31.86 4.12
3521 3738 6.139679 ACCATATATGAATAGGTGTTGGGG 57.860 41.667 14.54 0.00 0.00 4.96
3522 3739 4.949856 CCATATATGAATAGGTGTTGGGGC 59.050 45.833 14.54 0.00 0.00 5.80
3523 3740 2.631160 TATGAATAGGTGTTGGGGCG 57.369 50.000 0.00 0.00 0.00 6.13
3524 3741 0.106719 ATGAATAGGTGTTGGGGCGG 60.107 55.000 0.00 0.00 0.00 6.13
3525 3742 1.202099 TGAATAGGTGTTGGGGCGGA 61.202 55.000 0.00 0.00 0.00 5.54
3526 3743 0.034863 GAATAGGTGTTGGGGCGGAA 60.035 55.000 0.00 0.00 0.00 4.30
3527 3744 0.034477 AATAGGTGTTGGGGCGGAAG 60.034 55.000 0.00 0.00 0.00 3.46
3539 3756 3.248029 CGGAAGCAGCACAGTCAC 58.752 61.111 0.00 0.00 0.00 3.67
3540 3757 2.661566 CGGAAGCAGCACAGTCACG 61.662 63.158 0.00 0.00 0.00 4.35
3541 3758 2.553268 GAAGCAGCACAGTCACGC 59.447 61.111 0.00 0.00 0.00 5.34
3542 3759 2.959357 GAAGCAGCACAGTCACGCC 61.959 63.158 0.00 0.00 0.00 5.68
3543 3760 4.996434 AGCAGCACAGTCACGCCC 62.996 66.667 0.00 0.00 0.00 6.13
3545 3762 2.591429 CAGCACAGTCACGCCCAA 60.591 61.111 0.00 0.00 0.00 4.12
3546 3763 2.186160 CAGCACAGTCACGCCCAAA 61.186 57.895 0.00 0.00 0.00 3.28
3547 3764 1.453015 AGCACAGTCACGCCCAAAA 60.453 52.632 0.00 0.00 0.00 2.44
3548 3765 1.008538 GCACAGTCACGCCCAAAAG 60.009 57.895 0.00 0.00 0.00 2.27
3549 3766 1.444119 GCACAGTCACGCCCAAAAGA 61.444 55.000 0.00 0.00 0.00 2.52
3550 3767 1.021202 CACAGTCACGCCCAAAAGAA 58.979 50.000 0.00 0.00 0.00 2.52
3551 3768 1.403679 CACAGTCACGCCCAAAAGAAA 59.596 47.619 0.00 0.00 0.00 2.52
3552 3769 1.404035 ACAGTCACGCCCAAAAGAAAC 59.596 47.619 0.00 0.00 0.00 2.78
3553 3770 0.661020 AGTCACGCCCAAAAGAAACG 59.339 50.000 0.00 0.00 0.00 3.60
3554 3771 0.658897 GTCACGCCCAAAAGAAACGA 59.341 50.000 0.00 0.00 0.00 3.85
3555 3772 0.658897 TCACGCCCAAAAGAAACGAC 59.341 50.000 0.00 0.00 0.00 4.34
3556 3773 0.378962 CACGCCCAAAAGAAACGACA 59.621 50.000 0.00 0.00 0.00 4.35
3557 3774 0.661020 ACGCCCAAAAGAAACGACAG 59.339 50.000 0.00 0.00 0.00 3.51
3558 3775 0.941542 CGCCCAAAAGAAACGACAGA 59.058 50.000 0.00 0.00 0.00 3.41
3559 3776 1.069906 CGCCCAAAAGAAACGACAGAG 60.070 52.381 0.00 0.00 0.00 3.35
3560 3777 2.218603 GCCCAAAAGAAACGACAGAGA 58.781 47.619 0.00 0.00 0.00 3.10
3561 3778 2.616842 GCCCAAAAGAAACGACAGAGAA 59.383 45.455 0.00 0.00 0.00 2.87
3562 3779 3.066203 GCCCAAAAGAAACGACAGAGAAA 59.934 43.478 0.00 0.00 0.00 2.52
3563 3780 4.789802 GCCCAAAAGAAACGACAGAGAAAG 60.790 45.833 0.00 0.00 0.00 2.62
3564 3781 4.574828 CCCAAAAGAAACGACAGAGAAAGA 59.425 41.667 0.00 0.00 0.00 2.52
3565 3782 5.065988 CCCAAAAGAAACGACAGAGAAAGAA 59.934 40.000 0.00 0.00 0.00 2.52
3566 3783 5.965918 CCAAAAGAAACGACAGAGAAAGAAC 59.034 40.000 0.00 0.00 0.00 3.01
3567 3784 6.403200 CCAAAAGAAACGACAGAGAAAGAACA 60.403 38.462 0.00 0.00 0.00 3.18
3568 3785 6.737254 AAAGAAACGACAGAGAAAGAACAA 57.263 33.333 0.00 0.00 0.00 2.83
3569 3786 6.737254 AAGAAACGACAGAGAAAGAACAAA 57.263 33.333 0.00 0.00 0.00 2.83
3570 3787 6.737254 AGAAACGACAGAGAAAGAACAAAA 57.263 33.333 0.00 0.00 0.00 2.44
3571 3788 6.776094 AGAAACGACAGAGAAAGAACAAAAG 58.224 36.000 0.00 0.00 0.00 2.27
3572 3789 6.594159 AGAAACGACAGAGAAAGAACAAAAGA 59.406 34.615 0.00 0.00 0.00 2.52
3573 3790 6.737254 AACGACAGAGAAAGAACAAAAGAA 57.263 33.333 0.00 0.00 0.00 2.52
3574 3791 6.737254 ACGACAGAGAAAGAACAAAAGAAA 57.263 33.333 0.00 0.00 0.00 2.52
3575 3792 7.141100 ACGACAGAGAAAGAACAAAAGAAAA 57.859 32.000 0.00 0.00 0.00 2.29
3576 3793 7.021790 ACGACAGAGAAAGAACAAAAGAAAAC 58.978 34.615 0.00 0.00 0.00 2.43
3577 3794 7.021196 CGACAGAGAAAGAACAAAAGAAAACA 58.979 34.615 0.00 0.00 0.00 2.83
3578 3795 7.537306 CGACAGAGAAAGAACAAAAGAAAACAA 59.463 33.333 0.00 0.00 0.00 2.83
3579 3796 9.191995 GACAGAGAAAGAACAAAAGAAAACAAA 57.808 29.630 0.00 0.00 0.00 2.83
3580 3797 9.710900 ACAGAGAAAGAACAAAAGAAAACAAAT 57.289 25.926 0.00 0.00 0.00 2.32
3581 3798 9.962759 CAGAGAAAGAACAAAAGAAAACAAATG 57.037 29.630 0.00 0.00 0.00 2.32
3582 3799 8.659491 AGAGAAAGAACAAAAGAAAACAAATGC 58.341 29.630 0.00 0.00 0.00 3.56
3583 3800 7.751732 AGAAAGAACAAAAGAAAACAAATGCC 58.248 30.769 0.00 0.00 0.00 4.40
3584 3801 5.717038 AGAACAAAAGAAAACAAATGCCG 57.283 34.783 0.00 0.00 0.00 5.69
3585 3802 5.415221 AGAACAAAAGAAAACAAATGCCGA 58.585 33.333 0.00 0.00 0.00 5.54
3586 3803 5.290885 AGAACAAAAGAAAACAAATGCCGAC 59.709 36.000 0.00 0.00 0.00 4.79
3587 3804 4.499183 ACAAAAGAAAACAAATGCCGACA 58.501 34.783 0.00 0.00 0.00 4.35
3588 3805 4.566360 ACAAAAGAAAACAAATGCCGACAG 59.434 37.500 0.00 0.00 0.00 3.51
3589 3806 3.369546 AAGAAAACAAATGCCGACAGG 57.630 42.857 0.00 0.00 41.62 4.00
3590 3807 1.613437 AGAAAACAAATGCCGACAGGG 59.387 47.619 0.00 0.00 38.20 4.45
3591 3808 0.678950 AAAACAAATGCCGACAGGGG 59.321 50.000 0.00 0.00 38.20 4.79
3600 3817 2.511600 CGACAGGGGCGGATCAAC 60.512 66.667 0.00 0.00 0.00 3.18
3601 3818 2.668632 GACAGGGGCGGATCAACA 59.331 61.111 0.00 0.00 0.00 3.33
3602 3819 1.002624 GACAGGGGCGGATCAACAA 60.003 57.895 0.00 0.00 0.00 2.83
3603 3820 0.608035 GACAGGGGCGGATCAACAAA 60.608 55.000 0.00 0.00 0.00 2.83
3604 3821 0.178975 ACAGGGGCGGATCAACAAAA 60.179 50.000 0.00 0.00 0.00 2.44
3609 3826 1.001158 GGGCGGATCAACAAAAACGAA 60.001 47.619 0.00 0.00 0.00 3.85
3616 3833 4.261614 GGATCAACAAAAACGAAGAAGCCT 60.262 41.667 0.00 0.00 0.00 4.58
3617 3834 4.287238 TCAACAAAAACGAAGAAGCCTC 57.713 40.909 0.00 0.00 0.00 4.70
3620 3837 0.234884 AAAAACGAAGAAGCCTCGCG 59.765 50.000 0.00 0.00 0.00 5.87
3621 3838 0.599204 AAAACGAAGAAGCCTCGCGA 60.599 50.000 9.26 9.26 0.00 5.87
3622 3839 0.389948 AAACGAAGAAGCCTCGCGAT 60.390 50.000 10.36 0.00 0.00 4.58
3662 3879 1.951510 GGTACTCACCACGTCGTCA 59.048 57.895 0.00 0.00 45.04 4.35
3663 3880 0.524862 GGTACTCACCACGTCGTCAT 59.475 55.000 0.00 0.00 45.04 3.06
3684 3901 1.502231 CGATCAGTTAGATTGGGCCG 58.498 55.000 0.00 0.00 37.00 6.13
3689 3906 0.831307 AGTTAGATTGGGCCGAGGAC 59.169 55.000 0.00 0.00 0.00 3.85
3809 4026 2.551459 GCGTATTCGGCTAGGACTCTTA 59.449 50.000 0.00 0.00 37.56 2.10
3825 4042 5.420739 GGACTCTTATTATCCTAGGCCTCTG 59.579 48.000 9.68 3.03 32.21 3.35
3841 4058 7.017319 AGGCCTCTGGTACATTATATAAACC 57.983 40.000 0.00 7.59 38.20 3.27
3850 4067 5.818678 ACATTATATAAACCGAGGCCAGA 57.181 39.130 5.01 0.00 0.00 3.86
3918 4135 3.657015 AGACCACAGCATATGATCTCG 57.343 47.619 6.97 0.00 0.00 4.04
3922 4139 0.322975 ACAGCATATGATCTCGGGGC 59.677 55.000 6.97 0.00 0.00 5.80
3947 4164 7.473511 GCAGATCAACTCTTGTAACCCCTATAT 60.474 40.741 0.00 0.00 29.16 0.86
3990 4207 6.575056 GCAGCATGTAGGGTATTATCTCATCA 60.575 42.308 0.00 0.00 39.31 3.07
4004 4221 0.176680 TCATCAAGAGAGCCCGAAGC 59.823 55.000 0.00 0.00 44.25 3.86
4052 4269 3.191581 CCATCGATCCTAAGACGCATAGT 59.808 47.826 0.00 0.00 0.00 2.12
4074 4292 1.533513 GGACCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
212 213 1.152525 TAGTCCTCCCTCGCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
515 542 0.643820 CGAACTAAAACGCCTAGCCG 59.356 55.000 0.00 0.00 0.00 5.52
586 620 0.320858 TTGCGTGAACTCGGCCATTA 60.321 50.000 2.24 0.00 0.00 1.90
601 636 1.741993 CAAACTCGGTGACTTTTGCG 58.258 50.000 0.00 0.00 0.00 4.85
628 664 6.594159 GGGTTCATCAAAGATCGTCTTTTCTA 59.406 38.462 9.38 1.89 43.62 2.10
630 669 5.631992 GGGTTCATCAAAGATCGTCTTTTC 58.368 41.667 9.38 0.00 43.62 2.29
632 671 3.684788 CGGGTTCATCAAAGATCGTCTTT 59.315 43.478 7.04 7.04 46.75 2.52
640 679 2.038269 GCCGCGGGTTCATCAAAGA 61.038 57.895 29.38 0.00 0.00 2.52
683 722 1.759236 GGTCTCTGGGGTTCGGTTT 59.241 57.895 0.00 0.00 0.00 3.27
697 736 3.823330 CCGGCGCTAGTTCGGTCT 61.823 66.667 7.64 0.00 39.04 3.85
779 820 1.472728 CGACTGGGGTTTATCGGGAAG 60.473 57.143 0.00 0.00 0.00 3.46
781 822 0.615544 ACGACTGGGGTTTATCGGGA 60.616 55.000 0.00 0.00 38.88 5.14
825 866 5.293814 CGTCTAGGTCACGAAGAGAAATAGA 59.706 44.000 0.00 0.00 39.75 1.98
826 867 5.503498 CGTCTAGGTCACGAAGAGAAATAG 58.497 45.833 0.00 0.00 39.75 1.73
827 868 4.334759 CCGTCTAGGTCACGAAGAGAAATA 59.665 45.833 4.17 0.00 39.75 1.40
828 869 3.128938 CCGTCTAGGTCACGAAGAGAAAT 59.871 47.826 4.17 0.00 39.75 2.17
829 870 2.486982 CCGTCTAGGTCACGAAGAGAAA 59.513 50.000 4.17 0.00 39.75 2.52
830 871 2.082231 CCGTCTAGGTCACGAAGAGAA 58.918 52.381 4.17 0.00 39.75 2.87
831 872 1.735386 CCGTCTAGGTCACGAAGAGA 58.265 55.000 4.17 0.00 39.75 3.10
832 873 0.099082 GCCGTCTAGGTCACGAAGAG 59.901 60.000 4.17 0.00 43.70 2.85
833 874 1.642037 CGCCGTCTAGGTCACGAAGA 61.642 60.000 4.17 0.00 43.70 2.87
838 879 4.849329 CGCCGCCGTCTAGGTCAC 62.849 72.222 0.00 0.00 43.70 3.67
862 903 0.250038 GAGGCAGAAGCACACTGTCA 60.250 55.000 10.85 0.00 41.68 3.58
864 905 1.072159 GGAGGCAGAAGCACACTGT 59.928 57.895 0.00 0.00 44.61 3.55
866 907 1.374190 CAGGAGGCAGAAGCACACT 59.626 57.895 0.00 0.00 44.61 3.55
893 934 4.242586 TCGGGGTGGAGGTGTGGA 62.243 66.667 0.00 0.00 0.00 4.02
897 938 4.016706 GGTGTCGGGGTGGAGGTG 62.017 72.222 0.00 0.00 0.00 4.00
961 1002 3.372060 TGATGTTGTCGATATCACGAGC 58.628 45.455 3.12 0.00 42.88 5.03
1015 1056 0.545309 TCCAAGGAGACCTGGAGTGG 60.545 60.000 0.00 0.00 32.13 4.00
1022 1063 0.680061 GTGTTCGTCCAAGGAGACCT 59.320 55.000 0.00 0.00 32.91 3.85
1077 1118 2.557317 TCGGTTCCATTAGCGATTTCC 58.443 47.619 0.00 0.00 42.40 3.13
1128 1169 2.700371 AGGAGGATGCGATGTGTGAATA 59.300 45.455 0.00 0.00 0.00 1.75
1225 1266 4.277515 TCCTCCAAGACACTGATTTCTG 57.722 45.455 0.00 0.00 0.00 3.02
1229 1270 3.245052 CCCTTTCCTCCAAGACACTGATT 60.245 47.826 0.00 0.00 0.00 2.57
1237 1278 0.250727 CAACGCCCTTTCCTCCAAGA 60.251 55.000 0.00 0.00 0.00 3.02
1278 1319 3.686726 ACCAACTTCTCGAATTCATCTGC 59.313 43.478 6.22 0.00 0.00 4.26
1292 1333 3.254470 GGAGAGCTCCTAACCAACTTC 57.746 52.381 10.93 0.00 46.16 3.01
1319 1360 6.587990 CCATATACTTTATCCAGACGAAGCTG 59.412 42.308 0.00 0.00 35.66 4.24
1351 1392 1.003839 GCATCCACGAGGTCAACCA 60.004 57.895 1.33 0.00 38.89 3.67
1353 1394 0.037326 TCAGCATCCACGAGGTCAAC 60.037 55.000 0.00 0.00 35.89 3.18
1355 1396 0.684535 TTTCAGCATCCACGAGGTCA 59.315 50.000 0.00 0.00 35.89 4.02
1373 1414 1.742831 TCAGCAACTGAACGTGCTTTT 59.257 42.857 0.00 0.00 37.57 2.27
1388 1429 1.341852 TGTACGCACTACCTTTCAGCA 59.658 47.619 0.00 0.00 0.00 4.41
1391 1432 3.738830 ACTTGTACGCACTACCTTTCA 57.261 42.857 0.00 0.00 0.00 2.69
1400 1441 5.086058 CCAAACAATGATACTTGTACGCAC 58.914 41.667 0.00 0.00 38.38 5.34
1403 1444 4.092237 TCGCCAAACAATGATACTTGTACG 59.908 41.667 0.00 0.00 38.38 3.67
1405 1451 5.242434 AGTCGCCAAACAATGATACTTGTA 58.758 37.500 0.00 0.00 38.38 2.41
1407 1453 4.393062 AGAGTCGCCAAACAATGATACTTG 59.607 41.667 0.00 0.00 0.00 3.16
1411 1457 6.019075 CGAAATAGAGTCGCCAAACAATGATA 60.019 38.462 0.00 0.00 0.00 2.15
1418 1464 3.909019 CTCGAAATAGAGTCGCCAAAC 57.091 47.619 0.00 0.00 38.39 2.93
1427 1473 5.103000 CACCACTGGTTACTCGAAATAGAG 58.897 45.833 0.00 0.00 37.84 2.43
1431 1477 4.553330 ATCACCACTGGTTACTCGAAAT 57.447 40.909 0.00 0.00 31.02 2.17
1432 1478 4.081862 CCTATCACCACTGGTTACTCGAAA 60.082 45.833 0.00 0.00 31.02 3.46
1436 1482 4.466726 ACTTCCTATCACCACTGGTTACTC 59.533 45.833 0.00 0.00 31.02 2.59
1438 1484 4.820894 ACTTCCTATCACCACTGGTTAC 57.179 45.455 0.00 0.00 31.02 2.50
1439 1485 6.021030 AGTAACTTCCTATCACCACTGGTTA 58.979 40.000 0.00 0.00 31.02 2.85
1441 1487 4.223032 CAGTAACTTCCTATCACCACTGGT 59.777 45.833 0.00 0.00 35.62 4.00
1444 1490 5.780793 AGAACAGTAACTTCCTATCACCACT 59.219 40.000 0.00 0.00 0.00 4.00
1445 1491 6.038997 AGAACAGTAACTTCCTATCACCAC 57.961 41.667 0.00 0.00 0.00 4.16
1446 1492 6.269077 TCAAGAACAGTAACTTCCTATCACCA 59.731 38.462 0.00 0.00 0.00 4.17
1469 1515 8.961294 AACATTTTCATGGATTTTGTTCTTCA 57.039 26.923 0.00 0.00 34.27 3.02
1517 1563 8.915057 AAGCATATAACTAGATGTCTTTGCAT 57.085 30.769 0.00 0.00 0.00 3.96
1518 1564 8.737168 AAAGCATATAACTAGATGTCTTTGCA 57.263 30.769 0.00 0.00 33.92 4.08
1519 1565 9.050601 AGAAAGCATATAACTAGATGTCTTTGC 57.949 33.333 13.51 0.00 34.58 3.68
1524 1570 9.050601 AGCAAAGAAAGCATATAACTAGATGTC 57.949 33.333 0.00 0.00 0.00 3.06
1525 1571 8.970859 AGCAAAGAAAGCATATAACTAGATGT 57.029 30.769 0.00 0.00 0.00 3.06
1536 1582 7.209475 AGCAAAACTTTAGCAAAGAAAGCATA 58.791 30.769 13.35 0.00 41.02 3.14
1537 1583 6.051074 AGCAAAACTTTAGCAAAGAAAGCAT 58.949 32.000 13.35 0.00 41.02 3.79
1539 1585 5.973651 AGCAAAACTTTAGCAAAGAAAGC 57.026 34.783 13.35 11.09 41.02 3.51
1543 1589 9.593134 TTGAAATAAGCAAAACTTTAGCAAAGA 57.407 25.926 13.35 0.00 41.02 2.52
1551 1597 9.986833 GAACATGTTTGAAATAAGCAAAACTTT 57.013 25.926 13.36 0.00 39.97 2.66
1554 1600 7.914465 TGGAACATGTTTGAAATAAGCAAAAC 58.086 30.769 13.36 0.00 37.03 2.43
1576 1622 7.884877 ACTTGAATTAAGATGACAGTTCATGGA 59.115 33.333 0.00 0.00 42.95 3.41
1577 1623 7.966753 CACTTGAATTAAGATGACAGTTCATGG 59.033 37.037 0.00 0.00 42.95 3.66
1578 1624 8.509690 ACACTTGAATTAAGATGACAGTTCATG 58.490 33.333 0.00 0.00 42.95 3.07
1579 1625 8.627208 ACACTTGAATTAAGATGACAGTTCAT 57.373 30.769 0.00 0.00 45.78 2.57
1584 1630 6.176183 AGGGACACTTGAATTAAGATGACAG 58.824 40.000 0.00 0.00 39.76 3.51
1587 1633 5.046591 ACGAGGGACACTTGAATTAAGATGA 60.047 40.000 0.00 0.00 39.76 2.92
1592 1638 4.345859 ACACGAGGGACACTTGAATTAA 57.654 40.909 0.00 0.00 34.46 1.40
1597 1643 1.116308 TGAACACGAGGGACACTTGA 58.884 50.000 0.00 0.00 34.46 3.02
1601 1647 2.618053 CCTAATGAACACGAGGGACAC 58.382 52.381 0.00 0.00 0.00 3.67
1607 1653 3.334691 TCAAAGCCCTAATGAACACGAG 58.665 45.455 0.00 0.00 0.00 4.18
1609 1655 3.334691 TCTCAAAGCCCTAATGAACACG 58.665 45.455 0.00 0.00 0.00 4.49
1610 1656 4.518970 TGTTCTCAAAGCCCTAATGAACAC 59.481 41.667 0.00 0.00 37.82 3.32
1611 1657 4.724399 TGTTCTCAAAGCCCTAATGAACA 58.276 39.130 0.00 0.00 39.57 3.18
1612 1658 5.705609 TTGTTCTCAAAGCCCTAATGAAC 57.294 39.130 0.00 0.00 34.66 3.18
1615 1661 7.601856 TGTTTATTGTTCTCAAAGCCCTAATG 58.398 34.615 0.00 0.00 37.11 1.90
1616 1662 7.775053 TGTTTATTGTTCTCAAAGCCCTAAT 57.225 32.000 0.00 0.00 37.11 1.73
1643 1689 4.710423 TGAGTTTCTCATCCTCTTCTCG 57.290 45.455 0.00 0.00 35.39 4.04
1711 1757 3.802675 GCAAGTTCCAACTTACCTCTCGT 60.803 47.826 4.38 0.00 46.89 4.18
1726 1772 8.023128 ACATAATGTAGTGTCATTTGCAAGTTC 58.977 33.333 0.00 0.00 38.68 3.01
1750 1796 2.487265 GGACAGCAGGAAGAAGGAAACA 60.487 50.000 0.00 0.00 0.00 2.83
1755 1801 2.183679 ACTAGGACAGCAGGAAGAAGG 58.816 52.381 0.00 0.00 0.00 3.46
1762 1808 3.701542 TCAGTATCAACTAGGACAGCAGG 59.298 47.826 0.00 0.00 33.48 4.85
1775 1821 6.812879 ATACCGACGACATATCAGTATCAA 57.187 37.500 0.00 0.00 0.00 2.57
1786 1832 5.621555 GCATCCTTGTATATACCGACGACAT 60.622 44.000 10.38 0.00 0.00 3.06
1826 1872 2.756760 ACAATACTGCATGGCTCTTTGG 59.243 45.455 0.00 0.00 0.00 3.28
1836 1882 6.126652 ACCTTCTTAGGATCACAATACTGCAT 60.127 38.462 0.00 0.00 45.05 3.96
1853 1899 0.324943 GAGCCAGGTGCACCTTCTTA 59.675 55.000 36.06 0.00 46.09 2.10
1901 1947 2.089980 AGTTCATCTGCCAGTTGATGC 58.910 47.619 6.32 3.70 39.69 3.91
2000 2046 6.106877 ACAATTACGTCATGCAAGTCATAC 57.893 37.500 0.00 0.00 33.19 2.39
2017 2063 3.491964 CGGCGGAACCAGATCTACAATTA 60.492 47.826 0.00 0.00 39.03 1.40
2062 2108 2.236146 TGATGTATTCAACGCCCTCACT 59.764 45.455 0.00 0.00 0.00 3.41
2064 2110 3.342377 TTGATGTATTCAACGCCCTCA 57.658 42.857 0.00 0.00 39.44 3.86
2145 2191 0.033011 ACTCCAGGATAGCGGTCTGT 60.033 55.000 0.00 0.00 0.00 3.41
2426 2475 5.070847 ACAAAGAATGAGCCAAACCTTCATT 59.929 36.000 0.00 0.00 42.50 2.57
2467 2516 8.943002 CGTCTTATATTTTGGTTCAAAGGTAGT 58.057 33.333 0.00 0.00 34.72 2.73
2468 2517 8.943002 ACGTCTTATATTTTGGTTCAAAGGTAG 58.057 33.333 0.00 0.00 34.72 3.18
2469 2518 8.851541 ACGTCTTATATTTTGGTTCAAAGGTA 57.148 30.769 0.00 0.00 34.72 3.08
2470 2519 7.754851 ACGTCTTATATTTTGGTTCAAAGGT 57.245 32.000 0.00 0.00 34.72 3.50
2471 2520 9.471084 AAAACGTCTTATATTTTGGTTCAAAGG 57.529 29.630 0.00 0.00 34.72 3.11
2475 2524 9.672086 CTGAAAAACGTCTTATATTTTGGTTCA 57.328 29.630 0.00 0.00 0.00 3.18
2476 2525 9.124807 CCTGAAAAACGTCTTATATTTTGGTTC 57.875 33.333 0.00 0.00 0.00 3.62
2477 2526 7.597369 GCCTGAAAAACGTCTTATATTTTGGTT 59.403 33.333 0.00 0.00 0.00 3.67
2478 2527 7.039993 AGCCTGAAAAACGTCTTATATTTTGGT 60.040 33.333 0.00 0.00 0.00 3.67
2479 2528 7.273381 CAGCCTGAAAAACGTCTTATATTTTGG 59.727 37.037 0.00 0.00 0.00 3.28
2480 2529 8.020819 TCAGCCTGAAAAACGTCTTATATTTTG 58.979 33.333 0.00 0.00 0.00 2.44
2481 2530 8.106247 TCAGCCTGAAAAACGTCTTATATTTT 57.894 30.769 0.00 0.00 0.00 1.82
2482 2531 7.681939 TCAGCCTGAAAAACGTCTTATATTT 57.318 32.000 0.00 0.00 0.00 1.40
2483 2532 7.390718 AGTTCAGCCTGAAAAACGTCTTATATT 59.609 33.333 9.08 0.00 38.22 1.28
2484 2533 6.879458 AGTTCAGCCTGAAAAACGTCTTATAT 59.121 34.615 9.08 0.00 38.22 0.86
2485 2534 6.228258 AGTTCAGCCTGAAAAACGTCTTATA 58.772 36.000 9.08 0.00 38.22 0.98
2486 2535 5.063880 AGTTCAGCCTGAAAAACGTCTTAT 58.936 37.500 9.08 0.00 38.22 1.73
2487 2536 4.448210 AGTTCAGCCTGAAAAACGTCTTA 58.552 39.130 9.08 0.00 38.22 2.10
2488 2537 3.279434 AGTTCAGCCTGAAAAACGTCTT 58.721 40.909 9.08 0.00 38.22 3.01
2489 2538 2.919228 AGTTCAGCCTGAAAAACGTCT 58.081 42.857 9.08 0.00 38.22 4.18
2490 2539 3.808174 ACTAGTTCAGCCTGAAAAACGTC 59.192 43.478 9.08 0.00 38.22 4.34
2491 2540 3.805207 ACTAGTTCAGCCTGAAAAACGT 58.195 40.909 9.08 1.73 38.22 3.99
2492 2541 4.058817 AGACTAGTTCAGCCTGAAAAACG 58.941 43.478 9.08 1.11 38.22 3.60
2493 2542 7.492352 TTTAGACTAGTTCAGCCTGAAAAAC 57.508 36.000 9.08 0.00 38.22 2.43
2494 2543 8.514330 TTTTTAGACTAGTTCAGCCTGAAAAA 57.486 30.769 9.08 1.53 38.22 1.94
2516 2565 5.053978 ACTCCCTCTGTGAAGACATTTTT 57.946 39.130 0.00 0.00 0.00 1.94
2517 2566 4.713792 ACTCCCTCTGTGAAGACATTTT 57.286 40.909 0.00 0.00 0.00 1.82
2518 2567 4.593206 TGTACTCCCTCTGTGAAGACATTT 59.407 41.667 0.00 0.00 0.00 2.32
2519 2568 4.160329 TGTACTCCCTCTGTGAAGACATT 58.840 43.478 0.00 0.00 0.00 2.71
2520 2569 3.779444 TGTACTCCCTCTGTGAAGACAT 58.221 45.455 0.00 0.00 0.00 3.06
2521 2570 3.238788 TGTACTCCCTCTGTGAAGACA 57.761 47.619 0.00 0.00 0.00 3.41
2522 2571 4.810191 ATTGTACTCCCTCTGTGAAGAC 57.190 45.455 0.00 0.00 0.00 3.01
2523 2572 4.838423 TCAATTGTACTCCCTCTGTGAAGA 59.162 41.667 5.13 0.00 0.00 2.87
2524 2573 5.152623 TCAATTGTACTCCCTCTGTGAAG 57.847 43.478 5.13 0.00 0.00 3.02
2525 2574 5.560722 TTCAATTGTACTCCCTCTGTGAA 57.439 39.130 5.13 0.00 0.00 3.18
2526 2575 5.762179 ATTCAATTGTACTCCCTCTGTGA 57.238 39.130 5.13 0.00 0.00 3.58
2527 2576 7.921786 TTTATTCAATTGTACTCCCTCTGTG 57.078 36.000 5.13 0.00 0.00 3.66
2528 2577 9.838339 CTATTTATTCAATTGTACTCCCTCTGT 57.162 33.333 5.13 0.00 0.00 3.41
2529 2578 9.838339 ACTATTTATTCAATTGTACTCCCTCTG 57.162 33.333 5.13 0.00 30.04 3.35
2550 2599 9.845740 TGTGCATGTATAGGTTTTCATACTATT 57.154 29.630 0.00 0.00 0.00 1.73
2551 2600 9.845740 TTGTGCATGTATAGGTTTTCATACTAT 57.154 29.630 0.00 0.00 0.00 2.12
2552 2601 9.674068 TTTGTGCATGTATAGGTTTTCATACTA 57.326 29.630 0.00 0.00 0.00 1.82
2553 2602 8.574251 TTTGTGCATGTATAGGTTTTCATACT 57.426 30.769 0.00 0.00 0.00 2.12
2554 2603 9.072294 GTTTTGTGCATGTATAGGTTTTCATAC 57.928 33.333 0.00 0.00 0.00 2.39
2555 2604 9.019656 AGTTTTGTGCATGTATAGGTTTTCATA 57.980 29.630 0.00 0.00 0.00 2.15
2556 2605 7.895759 AGTTTTGTGCATGTATAGGTTTTCAT 58.104 30.769 0.00 0.00 0.00 2.57
2557 2606 7.013750 TGAGTTTTGTGCATGTATAGGTTTTCA 59.986 33.333 0.00 0.00 0.00 2.69
2558 2607 7.367285 TGAGTTTTGTGCATGTATAGGTTTTC 58.633 34.615 0.00 0.00 0.00 2.29
2559 2608 7.283625 TGAGTTTTGTGCATGTATAGGTTTT 57.716 32.000 0.00 0.00 0.00 2.43
2560 2609 6.892658 TGAGTTTTGTGCATGTATAGGTTT 57.107 33.333 0.00 0.00 0.00 3.27
2561 2610 6.892658 TTGAGTTTTGTGCATGTATAGGTT 57.107 33.333 0.00 0.00 0.00 3.50
2562 2611 6.264292 TGTTTGAGTTTTGTGCATGTATAGGT 59.736 34.615 0.00 0.00 0.00 3.08
2563 2612 6.676950 TGTTTGAGTTTTGTGCATGTATAGG 58.323 36.000 0.00 0.00 0.00 2.57
2564 2613 7.584108 TCTGTTTGAGTTTTGTGCATGTATAG 58.416 34.615 0.00 0.00 0.00 1.31
2565 2614 7.503521 TCTGTTTGAGTTTTGTGCATGTATA 57.496 32.000 0.00 0.00 0.00 1.47
2566 2615 6.389830 TCTGTTTGAGTTTTGTGCATGTAT 57.610 33.333 0.00 0.00 0.00 2.29
2567 2616 5.826601 TCTGTTTGAGTTTTGTGCATGTA 57.173 34.783 0.00 0.00 0.00 2.29
2568 2617 4.717233 TCTGTTTGAGTTTTGTGCATGT 57.283 36.364 0.00 0.00 0.00 3.21
2569 2618 5.526115 AGATCTGTTTGAGTTTTGTGCATG 58.474 37.500 0.00 0.00 0.00 4.06
2570 2619 5.779529 AGATCTGTTTGAGTTTTGTGCAT 57.220 34.783 0.00 0.00 0.00 3.96
2571 2620 6.882610 ATAGATCTGTTTGAGTTTTGTGCA 57.117 33.333 5.18 0.00 0.00 4.57
2572 2621 8.579682 AAAATAGATCTGTTTGAGTTTTGTGC 57.420 30.769 17.04 0.00 0.00 4.57
2622 2700 6.780457 AATGGGTGAAATAAGGATCAAGTG 57.220 37.500 0.00 0.00 0.00 3.16
2632 2710 7.461182 AATGAGACGAAAATGGGTGAAATAA 57.539 32.000 0.00 0.00 0.00 1.40
2680 2758 4.258702 ACCTTGCCATCTTAGCTATACG 57.741 45.455 0.00 0.00 0.00 3.06
2694 2772 5.393027 CCATACACTGAATTACAACCTTGCC 60.393 44.000 0.00 0.00 0.00 4.52
2695 2773 5.183140 ACCATACACTGAATTACAACCTTGC 59.817 40.000 0.00 0.00 0.00 4.01
2701 2779 8.349245 CAAACTGAACCATACACTGAATTACAA 58.651 33.333 0.00 0.00 0.00 2.41
2709 2787 4.578516 TCCAACAAACTGAACCATACACTG 59.421 41.667 0.00 0.00 0.00 3.66
2730 2808 1.129437 GTTCACGCTTGAGCTCAATCC 59.871 52.381 28.57 20.34 39.32 3.01
2732 2810 2.175878 AGTTCACGCTTGAGCTCAAT 57.824 45.000 28.57 12.37 38.90 2.57
2733 2811 3.686622 AGTTCACGCTTGAGCTCAA 57.313 47.368 26.87 26.87 38.90 3.02
2853 2987 8.375506 AGTCCTCAGTCAAACAAATAGTTGATA 58.624 33.333 10.35 0.00 41.19 2.15
2910 3044 5.743026 TGCTGAAAATGAGTACACGAAAA 57.257 34.783 0.00 0.00 0.00 2.29
3107 3244 9.146984 CTTTGACATTAAATGATTGTCATGCTT 57.853 29.630 9.11 0.00 44.09 3.91
3108 3245 8.525316 TCTTTGACATTAAATGATTGTCATGCT 58.475 29.630 9.11 0.00 44.09 3.79
3143 3280 0.523968 CACGGGCGAATGCATTTCTG 60.524 55.000 14.33 13.24 45.35 3.02
3144 3281 1.656818 CCACGGGCGAATGCATTTCT 61.657 55.000 14.33 0.00 45.35 2.52
3159 3296 7.318141 TGACCTAAGAGTTTTACTATTCCACG 58.682 38.462 0.00 0.00 31.40 4.94
3160 3297 7.278203 GCTGACCTAAGAGTTTTACTATTCCAC 59.722 40.741 0.00 0.00 31.40 4.02
3176 3313 7.777095 AGAATAAAGTACTGAGCTGACCTAAG 58.223 38.462 0.00 0.00 0.00 2.18
3183 3320 8.539770 TCTCAAAAGAATAAAGTACTGAGCTG 57.460 34.615 0.00 0.00 31.26 4.24
3201 3338 8.895737 ACATTTTACGAGGTAGTTTTCTCAAAA 58.104 29.630 0.00 0.00 0.00 2.44
3218 3435 7.120726 AGGACCCTTCAAAAGATACATTTTACG 59.879 37.037 0.00 0.00 31.29 3.18
3228 3445 3.117512 ACACACAGGACCCTTCAAAAGAT 60.118 43.478 0.00 0.00 0.00 2.40
3254 3471 4.063689 GGGATCTGAGATAACTGCACATG 58.936 47.826 0.00 0.00 0.00 3.21
3255 3472 3.972638 AGGGATCTGAGATAACTGCACAT 59.027 43.478 0.00 0.00 0.00 3.21
3257 3474 5.337169 GGATAGGGATCTGAGATAACTGCAC 60.337 48.000 0.00 0.00 32.15 4.57
3258 3475 4.774726 GGATAGGGATCTGAGATAACTGCA 59.225 45.833 0.00 0.00 32.15 4.41
3259 3476 4.142271 CGGATAGGGATCTGAGATAACTGC 60.142 50.000 0.00 0.00 40.47 4.40
3260 3477 4.400884 CCGGATAGGGATCTGAGATAACTG 59.599 50.000 0.00 0.00 40.47 3.16
3261 3478 4.044825 ACCGGATAGGGATCTGAGATAACT 59.955 45.833 9.46 0.00 46.96 2.24
3262 3479 4.345854 ACCGGATAGGGATCTGAGATAAC 58.654 47.826 9.46 0.00 46.96 1.89
3263 3480 4.676799 ACCGGATAGGGATCTGAGATAA 57.323 45.455 9.46 0.00 46.96 1.75
3266 3483 4.202684 ACAATACCGGATAGGGATCTGAGA 60.203 45.833 9.46 0.00 44.90 3.27
3267 3484 4.090090 ACAATACCGGATAGGGATCTGAG 58.910 47.826 9.46 0.00 44.90 3.35
3268 3485 4.127918 ACAATACCGGATAGGGATCTGA 57.872 45.455 9.46 0.00 44.90 3.27
3269 3486 4.563580 CCAACAATACCGGATAGGGATCTG 60.564 50.000 9.46 0.00 44.90 2.90
3270 3487 3.583086 CCAACAATACCGGATAGGGATCT 59.417 47.826 9.46 0.00 44.90 2.75
3271 3488 3.581332 TCCAACAATACCGGATAGGGATC 59.419 47.826 9.46 0.00 44.90 3.36
3273 3490 2.701951 GTCCAACAATACCGGATAGGGA 59.298 50.000 9.46 2.36 46.96 4.20
3281 3498 5.642063 ACACATTCTTAGTCCAACAATACCG 59.358 40.000 0.00 0.00 0.00 4.02
3346 3563 6.713762 AAACAAGATGGTCAAGAACAATGA 57.286 33.333 0.00 0.00 0.00 2.57
3381 3598 6.896613 CGTCATTAAGAAACATTCATGTCTCG 59.103 38.462 0.00 0.00 40.80 4.04
3393 3610 9.988350 ATATCATTCACAACGTCATTAAGAAAC 57.012 29.630 0.00 0.00 0.00 2.78
3436 3653 6.203723 CCTTTTCCGATAAGAGAATGACATCC 59.796 42.308 0.54 0.00 0.00 3.51
3441 3658 5.693769 ACCCTTTTCCGATAAGAGAATGA 57.306 39.130 0.54 0.00 0.00 2.57
3442 3659 6.759497 AAACCCTTTTCCGATAAGAGAATG 57.241 37.500 0.54 0.00 0.00 2.67
3474 3691 4.579340 TCGGTTGGTTGCTTTGTATACAAA 59.421 37.500 25.48 25.48 42.90 2.83
3475 3692 4.135306 TCGGTTGGTTGCTTTGTATACAA 58.865 39.130 14.35 14.35 0.00 2.41
3476 3693 3.741249 TCGGTTGGTTGCTTTGTATACA 58.259 40.909 0.08 0.08 0.00 2.29
3477 3694 4.469552 GTTCGGTTGGTTGCTTTGTATAC 58.530 43.478 0.00 0.00 0.00 1.47
3478 3695 3.502979 GGTTCGGTTGGTTGCTTTGTATA 59.497 43.478 0.00 0.00 0.00 1.47
3479 3696 2.295070 GGTTCGGTTGGTTGCTTTGTAT 59.705 45.455 0.00 0.00 0.00 2.29
3480 3697 1.677052 GGTTCGGTTGGTTGCTTTGTA 59.323 47.619 0.00 0.00 0.00 2.41
3481 3698 0.458260 GGTTCGGTTGGTTGCTTTGT 59.542 50.000 0.00 0.00 0.00 2.83
3482 3699 0.457851 TGGTTCGGTTGGTTGCTTTG 59.542 50.000 0.00 0.00 0.00 2.77
3483 3700 1.408969 ATGGTTCGGTTGGTTGCTTT 58.591 45.000 0.00 0.00 0.00 3.51
3484 3701 2.279935 TATGGTTCGGTTGGTTGCTT 57.720 45.000 0.00 0.00 0.00 3.91
3485 3702 2.507407 ATATGGTTCGGTTGGTTGCT 57.493 45.000 0.00 0.00 0.00 3.91
3486 3703 3.880490 TCATATATGGTTCGGTTGGTTGC 59.120 43.478 12.78 0.00 0.00 4.17
3487 3704 6.633500 ATTCATATATGGTTCGGTTGGTTG 57.367 37.500 12.78 0.00 0.00 3.77
3488 3705 6.940298 CCTATTCATATATGGTTCGGTTGGTT 59.060 38.462 12.78 0.00 0.00 3.67
3489 3706 6.043938 ACCTATTCATATATGGTTCGGTTGGT 59.956 38.462 12.78 7.75 0.00 3.67
3490 3707 6.371548 CACCTATTCATATATGGTTCGGTTGG 59.628 42.308 12.78 7.23 0.00 3.77
3491 3708 6.934645 ACACCTATTCATATATGGTTCGGTTG 59.065 38.462 12.78 10.81 0.00 3.77
3492 3709 7.074653 ACACCTATTCATATATGGTTCGGTT 57.925 36.000 12.78 4.37 0.00 4.44
3493 3710 6.681729 ACACCTATTCATATATGGTTCGGT 57.318 37.500 12.78 11.18 0.00 4.69
3494 3711 6.371548 CCAACACCTATTCATATATGGTTCGG 59.628 42.308 12.78 10.63 0.00 4.30
3495 3712 6.371548 CCCAACACCTATTCATATATGGTTCG 59.628 42.308 12.78 0.74 0.00 3.95
3496 3713 6.659242 CCCCAACACCTATTCATATATGGTTC 59.341 42.308 12.78 0.00 0.00 3.62
3497 3714 6.552008 CCCCAACACCTATTCATATATGGTT 58.448 40.000 12.78 4.46 0.00 3.67
3498 3715 5.516591 GCCCCAACACCTATTCATATATGGT 60.517 44.000 12.78 5.04 0.00 3.55
3499 3716 4.949856 GCCCCAACACCTATTCATATATGG 59.050 45.833 12.78 0.00 0.00 2.74
3500 3717 4.635765 CGCCCCAACACCTATTCATATATG 59.364 45.833 6.36 6.36 0.00 1.78
3501 3718 4.324254 CCGCCCCAACACCTATTCATATAT 60.324 45.833 0.00 0.00 0.00 0.86
3502 3719 3.008594 CCGCCCCAACACCTATTCATATA 59.991 47.826 0.00 0.00 0.00 0.86
3503 3720 2.224769 CCGCCCCAACACCTATTCATAT 60.225 50.000 0.00 0.00 0.00 1.78
3504 3721 1.142060 CCGCCCCAACACCTATTCATA 59.858 52.381 0.00 0.00 0.00 2.15
3505 3722 0.106719 CCGCCCCAACACCTATTCAT 60.107 55.000 0.00 0.00 0.00 2.57
3506 3723 1.202099 TCCGCCCCAACACCTATTCA 61.202 55.000 0.00 0.00 0.00 2.57
3507 3724 0.034863 TTCCGCCCCAACACCTATTC 60.035 55.000 0.00 0.00 0.00 1.75
3508 3725 0.034477 CTTCCGCCCCAACACCTATT 60.034 55.000 0.00 0.00 0.00 1.73
3509 3726 1.607612 CTTCCGCCCCAACACCTAT 59.392 57.895 0.00 0.00 0.00 2.57
3510 3727 3.074281 CTTCCGCCCCAACACCTA 58.926 61.111 0.00 0.00 0.00 3.08
3511 3728 4.660938 GCTTCCGCCCCAACACCT 62.661 66.667 0.00 0.00 0.00 4.00
3512 3729 4.966787 TGCTTCCGCCCCAACACC 62.967 66.667 0.00 0.00 34.43 4.16
3513 3730 3.365265 CTGCTTCCGCCCCAACAC 61.365 66.667 0.00 0.00 34.43 3.32
3520 3737 3.426568 GACTGTGCTGCTTCCGCC 61.427 66.667 0.00 0.00 34.43 6.13
3521 3738 2.666190 TGACTGTGCTGCTTCCGC 60.666 61.111 0.00 0.00 0.00 5.54
3522 3739 2.661566 CGTGACTGTGCTGCTTCCG 61.662 63.158 0.00 0.00 0.00 4.30
3523 3740 2.959357 GCGTGACTGTGCTGCTTCC 61.959 63.158 0.00 0.00 0.00 3.46
3524 3741 2.553268 GCGTGACTGTGCTGCTTC 59.447 61.111 0.00 0.00 0.00 3.86
3525 3742 2.974698 GGCGTGACTGTGCTGCTT 60.975 61.111 0.00 0.00 0.00 3.91
3526 3743 4.996434 GGGCGTGACTGTGCTGCT 62.996 66.667 0.00 0.00 0.00 4.24
3528 3745 1.723608 TTTTGGGCGTGACTGTGCTG 61.724 55.000 0.00 0.00 0.00 4.41
3529 3746 1.447317 CTTTTGGGCGTGACTGTGCT 61.447 55.000 0.00 0.00 0.00 4.40
3530 3747 1.008538 CTTTTGGGCGTGACTGTGC 60.009 57.895 0.00 0.00 0.00 4.57
3531 3748 1.021202 TTCTTTTGGGCGTGACTGTG 58.979 50.000 0.00 0.00 0.00 3.66
3532 3749 1.404035 GTTTCTTTTGGGCGTGACTGT 59.596 47.619 0.00 0.00 0.00 3.55
3533 3750 1.596954 CGTTTCTTTTGGGCGTGACTG 60.597 52.381 0.00 0.00 0.00 3.51
3534 3751 0.661020 CGTTTCTTTTGGGCGTGACT 59.339 50.000 0.00 0.00 0.00 3.41
3535 3752 0.658897 TCGTTTCTTTTGGGCGTGAC 59.341 50.000 0.00 0.00 0.00 3.67
3536 3753 0.658897 GTCGTTTCTTTTGGGCGTGA 59.341 50.000 0.00 0.00 0.00 4.35
3537 3754 0.378962 TGTCGTTTCTTTTGGGCGTG 59.621 50.000 0.00 0.00 0.00 5.34
3538 3755 0.661020 CTGTCGTTTCTTTTGGGCGT 59.339 50.000 0.00 0.00 0.00 5.68
3539 3756 0.941542 TCTGTCGTTTCTTTTGGGCG 59.058 50.000 0.00 0.00 0.00 6.13
3540 3757 2.218603 TCTCTGTCGTTTCTTTTGGGC 58.781 47.619 0.00 0.00 0.00 5.36
3541 3758 4.574828 TCTTTCTCTGTCGTTTCTTTTGGG 59.425 41.667 0.00 0.00 0.00 4.12
3542 3759 5.734855 TCTTTCTCTGTCGTTTCTTTTGG 57.265 39.130 0.00 0.00 0.00 3.28
3543 3760 6.542852 TGTTCTTTCTCTGTCGTTTCTTTTG 58.457 36.000 0.00 0.00 0.00 2.44
3544 3761 6.737254 TGTTCTTTCTCTGTCGTTTCTTTT 57.263 33.333 0.00 0.00 0.00 2.27
3545 3762 6.737254 TTGTTCTTTCTCTGTCGTTTCTTT 57.263 33.333 0.00 0.00 0.00 2.52
3546 3763 6.737254 TTTGTTCTTTCTCTGTCGTTTCTT 57.263 33.333 0.00 0.00 0.00 2.52
3547 3764 6.594159 TCTTTTGTTCTTTCTCTGTCGTTTCT 59.406 34.615 0.00 0.00 0.00 2.52
3548 3765 6.772078 TCTTTTGTTCTTTCTCTGTCGTTTC 58.228 36.000 0.00 0.00 0.00 2.78
3549 3766 6.737254 TCTTTTGTTCTTTCTCTGTCGTTT 57.263 33.333 0.00 0.00 0.00 3.60
3550 3767 6.737254 TTCTTTTGTTCTTTCTCTGTCGTT 57.263 33.333 0.00 0.00 0.00 3.85
3551 3768 6.737254 TTTCTTTTGTTCTTTCTCTGTCGT 57.263 33.333 0.00 0.00 0.00 4.34
3552 3769 7.021196 TGTTTTCTTTTGTTCTTTCTCTGTCG 58.979 34.615 0.00 0.00 0.00 4.35
3553 3770 8.742554 TTGTTTTCTTTTGTTCTTTCTCTGTC 57.257 30.769 0.00 0.00 0.00 3.51
3554 3771 9.710900 ATTTGTTTTCTTTTGTTCTTTCTCTGT 57.289 25.926 0.00 0.00 0.00 3.41
3555 3772 9.962759 CATTTGTTTTCTTTTGTTCTTTCTCTG 57.037 29.630 0.00 0.00 0.00 3.35
3556 3773 8.659491 GCATTTGTTTTCTTTTGTTCTTTCTCT 58.341 29.630 0.00 0.00 0.00 3.10
3557 3774 7.904977 GGCATTTGTTTTCTTTTGTTCTTTCTC 59.095 33.333 0.00 0.00 0.00 2.87
3558 3775 7.412891 CGGCATTTGTTTTCTTTTGTTCTTTCT 60.413 33.333 0.00 0.00 0.00 2.52
3559 3776 6.682441 CGGCATTTGTTTTCTTTTGTTCTTTC 59.318 34.615 0.00 0.00 0.00 2.62
3560 3777 6.370166 TCGGCATTTGTTTTCTTTTGTTCTTT 59.630 30.769 0.00 0.00 0.00 2.52
3561 3778 5.872070 TCGGCATTTGTTTTCTTTTGTTCTT 59.128 32.000 0.00 0.00 0.00 2.52
3562 3779 5.290885 GTCGGCATTTGTTTTCTTTTGTTCT 59.709 36.000 0.00 0.00 0.00 3.01
3563 3780 5.062809 TGTCGGCATTTGTTTTCTTTTGTTC 59.937 36.000 0.00 0.00 0.00 3.18
3564 3781 4.932200 TGTCGGCATTTGTTTTCTTTTGTT 59.068 33.333 0.00 0.00 0.00 2.83
3565 3782 4.499183 TGTCGGCATTTGTTTTCTTTTGT 58.501 34.783 0.00 0.00 0.00 2.83
3566 3783 4.025813 CCTGTCGGCATTTGTTTTCTTTTG 60.026 41.667 0.00 0.00 0.00 2.44
3567 3784 4.119136 CCTGTCGGCATTTGTTTTCTTTT 58.881 39.130 0.00 0.00 0.00 2.27
3568 3785 3.492482 CCCTGTCGGCATTTGTTTTCTTT 60.492 43.478 0.00 0.00 0.00 2.52
3569 3786 2.035832 CCCTGTCGGCATTTGTTTTCTT 59.964 45.455 0.00 0.00 0.00 2.52
3570 3787 1.613437 CCCTGTCGGCATTTGTTTTCT 59.387 47.619 0.00 0.00 0.00 2.52
3571 3788 1.336795 CCCCTGTCGGCATTTGTTTTC 60.337 52.381 0.00 0.00 0.00 2.29
3572 3789 0.678950 CCCCTGTCGGCATTTGTTTT 59.321 50.000 0.00 0.00 0.00 2.43
3573 3790 2.350738 CCCCTGTCGGCATTTGTTT 58.649 52.632 0.00 0.00 0.00 2.83
3574 3791 4.095590 CCCCTGTCGGCATTTGTT 57.904 55.556 0.00 0.00 0.00 2.83
3583 3800 2.511600 GTTGATCCGCCCCTGTCG 60.512 66.667 0.00 0.00 0.00 4.35
3584 3801 0.608035 TTTGTTGATCCGCCCCTGTC 60.608 55.000 0.00 0.00 0.00 3.51
3585 3802 0.178975 TTTTGTTGATCCGCCCCTGT 60.179 50.000 0.00 0.00 0.00 4.00
3586 3803 0.965439 TTTTTGTTGATCCGCCCCTG 59.035 50.000 0.00 0.00 0.00 4.45
3587 3804 0.966179 GTTTTTGTTGATCCGCCCCT 59.034 50.000 0.00 0.00 0.00 4.79
3588 3805 0.388006 CGTTTTTGTTGATCCGCCCC 60.388 55.000 0.00 0.00 0.00 5.80
3589 3806 0.594110 TCGTTTTTGTTGATCCGCCC 59.406 50.000 0.00 0.00 0.00 6.13
3590 3807 2.031508 TCTTCGTTTTTGTTGATCCGCC 60.032 45.455 0.00 0.00 0.00 6.13
3591 3808 3.262135 TCTTCGTTTTTGTTGATCCGC 57.738 42.857 0.00 0.00 0.00 5.54
3592 3809 3.664025 GCTTCTTCGTTTTTGTTGATCCG 59.336 43.478 0.00 0.00 0.00 4.18
3593 3810 3.981416 GGCTTCTTCGTTTTTGTTGATCC 59.019 43.478 0.00 0.00 0.00 3.36
3594 3811 4.860072 AGGCTTCTTCGTTTTTGTTGATC 58.140 39.130 0.00 0.00 0.00 2.92
3595 3812 4.554723 CGAGGCTTCTTCGTTTTTGTTGAT 60.555 41.667 0.00 0.00 0.00 2.57
3596 3813 3.242608 CGAGGCTTCTTCGTTTTTGTTGA 60.243 43.478 0.00 0.00 0.00 3.18
3597 3814 3.035942 CGAGGCTTCTTCGTTTTTGTTG 58.964 45.455 0.00 0.00 0.00 3.33
3598 3815 2.540973 GCGAGGCTTCTTCGTTTTTGTT 60.541 45.455 0.00 0.00 0.00 2.83
3599 3816 1.002792 GCGAGGCTTCTTCGTTTTTGT 60.003 47.619 0.00 0.00 0.00 2.83
3600 3817 1.674908 GCGAGGCTTCTTCGTTTTTG 58.325 50.000 0.00 0.00 0.00 2.44
3601 3818 0.234884 CGCGAGGCTTCTTCGTTTTT 59.765 50.000 0.00 0.00 0.00 1.94
3602 3819 0.599204 TCGCGAGGCTTCTTCGTTTT 60.599 50.000 3.71 0.00 0.00 2.43
3603 3820 0.389948 ATCGCGAGGCTTCTTCGTTT 60.390 50.000 16.66 0.00 0.00 3.60
3604 3821 0.389948 AATCGCGAGGCTTCTTCGTT 60.390 50.000 16.66 0.00 0.00 3.85
3609 3826 1.517257 CGTCAATCGCGAGGCTTCT 60.517 57.895 16.66 0.00 0.00 2.85
3616 3833 2.126228 GGACACCGTCAATCGCGA 60.126 61.111 13.09 13.09 38.35 5.87
3617 3834 2.126071 AGGACACCGTCAATCGCG 60.126 61.111 0.00 0.00 38.35 5.87
3620 3837 0.608640 AGTCCAGGACACCGTCAATC 59.391 55.000 22.31 0.00 34.60 2.67
3621 3838 1.825474 CTAGTCCAGGACACCGTCAAT 59.175 52.381 22.31 0.50 34.60 2.57
3622 3839 1.254026 CTAGTCCAGGACACCGTCAA 58.746 55.000 22.31 0.00 34.60 3.18
3662 3879 2.039084 GGCCCAATCTAACTGATCGGAT 59.961 50.000 9.00 0.00 30.83 4.18
3663 3880 1.416401 GGCCCAATCTAACTGATCGGA 59.584 52.381 9.00 0.00 30.83 4.55
3689 3906 1.125093 TGAGTATACGGCCATGGGGG 61.125 60.000 15.13 0.00 40.85 5.40
3769 3986 2.359967 CGGTGGGGAGGAGTCCTTC 61.360 68.421 14.41 11.80 43.36 3.46
3809 4026 4.487282 TGTACCAGAGGCCTAGGATAAT 57.513 45.455 26.29 9.63 0.00 1.28
3825 4042 5.797051 TGGCCTCGGTTTATATAATGTACC 58.203 41.667 3.32 5.15 0.00 3.34
3841 4058 1.801771 CTATCGACTAGTCTGGCCTCG 59.198 57.143 20.34 2.59 0.00 4.63
3906 4123 0.610174 TCTGCCCCGAGATCATATGC 59.390 55.000 0.00 0.00 0.00 3.14
3918 4135 3.010420 GTTACAAGAGTTGATCTGCCCC 58.990 50.000 0.00 0.00 38.67 5.80
3922 4139 4.559862 AGGGGTTACAAGAGTTGATCTG 57.440 45.455 0.00 0.00 38.67 2.90
3947 4164 6.330004 TGCTGCTTGATTGACTTTAATGAA 57.670 33.333 0.00 0.00 0.00 2.57
3967 4184 7.455953 TCTTGATGAGATAATACCCTACATGCT 59.544 37.037 0.00 0.00 0.00 3.79
4052 4269 1.614226 CTCGGGTAGGGGTCCCAAA 60.614 63.158 10.98 0.00 44.81 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.