Multiple sequence alignment - TraesCS1B01G254800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G254800 chr1B 100.000 5420 0 0 567 5986 449387022 449392441 0.000000e+00 10009.0
1 TraesCS1B01G254800 chr1B 100.000 305 0 0 1 305 449386456 449386760 1.130000e-156 564.0
2 TraesCS1B01G254800 chr1B 96.129 310 12 0 567 876 61991592 61991901 1.930000e-139 507.0
3 TraesCS1B01G254800 chr1B 95.806 310 11 1 567 876 672156675 672156982 3.220000e-137 499.0
4 TraesCS1B01G254800 chr1B 97.899 238 5 0 68 305 61990712 61990949 4.320000e-111 412.0
5 TraesCS1B01G254800 chr1B 98.291 234 4 0 72 305 36274405 36274638 1.550000e-110 411.0
6 TraesCS1B01G254800 chr1B 89.941 169 11 1 3074 3236 449389367 449389535 4.700000e-51 213.0
7 TraesCS1B01G254800 chr1B 89.941 169 11 1 2912 3080 449389529 449389691 4.700000e-51 213.0
8 TraesCS1B01G254800 chr1B 98.649 74 1 0 1 74 449364188 449364261 1.350000e-26 132.0
9 TraesCS1B01G254800 chr1B 93.878 49 0 1 880 928 449364261 449364306 2.990000e-08 71.3
10 TraesCS1B01G254800 chr1A 95.399 2130 73 11 3037 5149 431778545 431780666 0.000000e+00 3367.0
11 TraesCS1B01G254800 chr1A 94.500 1709 61 16 880 2568 431776451 431778146 0.000000e+00 2604.0
12 TraesCS1B01G254800 chr1A 96.929 521 16 0 5464 5984 431780928 431781448 0.000000e+00 874.0
13 TraesCS1B01G254800 chr1A 95.045 222 9 2 2825 3045 431778143 431778363 1.230000e-91 348.0
14 TraesCS1B01G254800 chr1A 89.714 175 10 3 2908 3080 431778576 431778744 3.630000e-52 217.0
15 TraesCS1B01G254800 chr1A 87.407 135 11 1 3073 3201 431778229 431778363 3.740000e-32 150.0
16 TraesCS1B01G254800 chr1A 96.774 62 2 0 1 62 431776385 431776446 2.950000e-18 104.0
17 TraesCS1B01G254800 chr1A 93.617 47 2 1 5320 5366 310359261 310359306 1.080000e-07 69.4
18 TraesCS1B01G254800 chr1D 92.896 2196 98 23 3147 5306 333498343 333500516 0.000000e+00 3138.0
19 TraesCS1B01G254800 chr1D 95.396 1694 56 9 880 2568 333496129 333497805 0.000000e+00 2676.0
20 TraesCS1B01G254800 chr1D 96.923 520 16 0 5465 5984 333500584 333501103 0.000000e+00 872.0
21 TraesCS1B01G254800 chr1D 94.536 183 4 1 2825 3007 333497802 333497978 1.640000e-70 278.0
22 TraesCS1B01G254800 chr1D 87.879 99 3 3 2991 3080 333498343 333498441 2.280000e-19 108.0
23 TraesCS1B01G254800 chr1D 88.710 62 5 2 5321 5380 35756917 35756856 2.310000e-09 75.0
24 TraesCS1B01G254800 chr2B 97.097 310 9 0 567 876 752930556 752930247 1.910000e-144 523.0
25 TraesCS1B01G254800 chr2B 95.541 314 13 1 567 880 617149818 617150130 8.960000e-138 501.0
26 TraesCS1B01G254800 chr2B 97.358 265 7 0 2562 2826 526267222 526266958 9.150000e-123 451.0
27 TraesCS1B01G254800 chr3B 95.541 314 14 0 567 880 671136501 671136188 2.490000e-138 503.0
28 TraesCS1B01G254800 chr3B 98.106 264 5 0 2563 2826 97264524 97264261 1.520000e-125 460.0
29 TraesCS1B01G254800 chr3B 96.680 241 6 2 65 305 726355364 726355602 3.360000e-107 399.0
30 TraesCS1B01G254800 chr3B 79.359 281 38 13 1203 1465 794864784 794865062 4.770000e-41 180.0
31 TraesCS1B01G254800 chr3B 93.043 115 8 0 998 1112 794864564 794864678 1.030000e-37 169.0
32 TraesCS1B01G254800 chr3B 100.000 28 0 0 3252 3279 209598925 209598898 1.100000e-02 52.8
33 TraesCS1B01G254800 chr6B 95.541 314 13 1 567 880 704691331 704691643 8.960000e-138 501.0
34 TraesCS1B01G254800 chr6B 94.984 319 13 2 567 884 436801165 436801481 1.160000e-136 497.0
35 TraesCS1B01G254800 chr6B 97.037 270 8 0 2557 2826 556846400 556846131 7.070000e-124 455.0
36 TraesCS1B01G254800 chr6B 93.919 296 14 3 2561 2853 281153538 281153832 1.530000e-120 444.0
37 TraesCS1B01G254800 chr5B 95.541 314 13 1 567 880 659815018 659815330 8.960000e-138 501.0
38 TraesCS1B01G254800 chr5B 98.291 234 4 0 72 305 411933655 411933422 1.550000e-110 411.0
39 TraesCS1B01G254800 chr7B 95.527 313 12 1 567 879 698922769 698922459 3.220000e-137 499.0
40 TraesCS1B01G254800 chr7B 97.368 266 7 0 2561 2826 59877326 59877061 2.540000e-123 453.0
41 TraesCS1B01G254800 chr7B 97.004 267 7 1 2560 2826 725423932 725423667 1.180000e-121 448.0
42 TraesCS1B01G254800 chr7B 97.863 234 5 0 72 305 699151796 699152029 7.220000e-109 405.0
43 TraesCS1B01G254800 chr7B 87.302 63 6 2 5307 5369 11922467 11922407 2.990000e-08 71.3
44 TraesCS1B01G254800 chr7B 86.154 65 8 1 5308 5371 196390889 196390825 1.080000e-07 69.4
45 TraesCS1B01G254800 chr4B 96.715 274 8 1 2563 2836 410992899 410993171 7.070000e-124 455.0
46 TraesCS1B01G254800 chr4B 97.863 234 5 0 72 305 479219505 479219272 7.220000e-109 405.0
47 TraesCS1B01G254800 chr4B 97.872 235 4 1 72 305 640828484 640828250 7.220000e-109 405.0
48 TraesCS1B01G254800 chr4B 97.863 234 5 0 72 305 672315503 672315270 7.220000e-109 405.0
49 TraesCS1B01G254800 chr4B 97.083 240 6 1 66 304 28266979 28266740 2.600000e-108 403.0
50 TraesCS1B01G254800 chr4B 89.474 57 5 1 5321 5376 438099397 438099453 2.990000e-08 71.3
51 TraesCS1B01G254800 chr5A 97.719 263 6 0 2564 2826 617542430 617542168 2.540000e-123 453.0
52 TraesCS1B01G254800 chr6A 96.014 276 10 1 2564 2838 388922066 388921791 1.180000e-121 448.0
53 TraesCS1B01G254800 chr3A 77.689 502 68 30 998 1465 724053116 724053607 3.560000e-67 267.0
54 TraesCS1B01G254800 chrUn 81.887 265 38 8 1203 1465 45750705 45750961 1.310000e-51 215.0
55 TraesCS1B01G254800 chrUn 93.043 115 8 0 998 1112 45750492 45750606 1.030000e-37 169.0
56 TraesCS1B01G254800 chrUn 89.552 67 4 2 5307 5370 49143821 49143755 1.380000e-11 82.4
57 TraesCS1B01G254800 chrUn 92.157 51 3 1 5321 5370 378270603 378270653 2.990000e-08 71.3
58 TraesCS1B01G254800 chrUn 92.157 51 3 1 5321 5370 447954311 447954261 2.990000e-08 71.3
59 TraesCS1B01G254800 chrUn 90.196 51 4 1 5321 5370 320620118 320620068 1.390000e-06 65.8
60 TraesCS1B01G254800 chrUn 92.308 39 3 0 5331 5369 22763125 22763087 8.380000e-04 56.5
61 TraesCS1B01G254800 chrUn 96.970 33 1 0 5326 5358 22763157 22763189 8.380000e-04 56.5
62 TraesCS1B01G254800 chrUn 83.871 62 7 2 5308 5366 298898228 298898167 8.380000e-04 56.5
63 TraesCS1B01G254800 chrUn 83.871 62 7 2 5308 5366 480044556 480044495 8.380000e-04 56.5
64 TraesCS1B01G254800 chrUn 100.000 29 0 0 5331 5359 76787396 76787424 3.000000e-03 54.7
65 TraesCS1B01G254800 chr3D 90.598 117 10 1 4519 4634 191315710 191315594 2.890000e-33 154.0
66 TraesCS1B01G254800 chr3D 88.333 60 5 2 5318 5377 459472473 459472530 2.990000e-08 71.3
67 TraesCS1B01G254800 chr2D 91.935 62 4 1 5308 5369 106264577 106264517 1.070000e-12 86.1
68 TraesCS1B01G254800 chr2D 89.474 57 5 1 5321 5376 328357026 328357082 2.990000e-08 71.3
69 TraesCS1B01G254800 chr5D 95.745 47 2 0 5323 5369 388039405 388039451 6.430000e-10 76.8
70 TraesCS1B01G254800 chr5D 89.286 56 5 1 5321 5375 501203798 501203743 1.080000e-07 69.4
71 TraesCS1B01G254800 chr2A 88.710 62 6 1 5308 5369 102678155 102678095 2.310000e-09 75.0
72 TraesCS1B01G254800 chr6D 87.500 64 6 2 5307 5370 439768392 439768331 8.320000e-09 73.1
73 TraesCS1B01G254800 chr6D 90.741 54 4 1 5321 5373 309072553 309072500 2.990000e-08 71.3
74 TraesCS1B01G254800 chr6D 93.617 47 2 1 5320 5366 62245353 62245398 1.080000e-07 69.4
75 TraesCS1B01G254800 chr6D 86.885 61 6 2 5321 5380 59623224 59623165 3.870000e-07 67.6
76 TraesCS1B01G254800 chr6D 87.500 56 7 0 5325 5380 370847747 370847692 1.390000e-06 65.8
77 TraesCS1B01G254800 chr7A 89.474 57 5 1 5321 5376 611771812 611771868 2.990000e-08 71.3
78 TraesCS1B01G254800 chr4D 93.617 47 2 1 5321 5366 38445589 38445635 1.080000e-07 69.4
79 TraesCS1B01G254800 chr4D 93.617 47 2 1 5321 5366 236940162 236940208 1.080000e-07 69.4
80 TraesCS1B01G254800 chr4D 92.000 50 3 1 5321 5369 454429377 454429328 1.080000e-07 69.4
81 TraesCS1B01G254800 chr4D 89.286 56 4 2 5321 5374 489228379 489228434 1.080000e-07 69.4
82 TraesCS1B01G254800 chr4D 91.489 47 4 0 5324 5370 295025767 295025721 1.390000e-06 65.8
83 TraesCS1B01G254800 chr4D 88.889 54 5 1 5321 5373 478671887 478671940 1.390000e-06 65.8
84 TraesCS1B01G254800 chr4D 86.441 59 6 2 5325 5381 384974330 384974272 5.010000e-06 63.9
85 TraesCS1B01G254800 chr4D 83.562 73 7 5 5304 5375 499313152 499313220 5.010000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G254800 chr1B 449386456 449392441 5985 False 2749.750000 10009 94.970500 1 5986 4 chr1B.!!$F5 5985
1 TraesCS1B01G254800 chr1B 61990712 61991901 1189 False 459.500000 507 97.014000 68 876 2 chr1B.!!$F3 808
2 TraesCS1B01G254800 chr1A 431776385 431781448 5063 False 1094.857143 3367 93.681143 1 5984 7 chr1A.!!$F2 5983
3 TraesCS1B01G254800 chr1D 333496129 333501103 4974 False 1414.400000 3138 93.526000 880 5984 5 chr1D.!!$F1 5104

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 747 0.030638 TTTTTGCGCTCTGCTGGAAC 59.969 50.000 9.73 0.00 46.63 3.62 F
782 783 0.105964 ATTATGGCGCGGCTACTGAA 59.894 50.000 33.23 18.74 0.00 3.02 F
895 896 0.108019 GAAACCACACCCCTCTTCGT 59.892 55.000 0.00 0.00 0.00 3.85 F
1422 1663 0.694771 TCCTCAAGAAGCTGCACCAT 59.305 50.000 1.02 0.00 0.00 3.55 F
1452 1693 1.561643 TCCAGCTCAAGGAGATCGTT 58.438 50.000 0.00 0.00 0.00 3.85 F
1545 1786 1.916181 AGAGGACTAATGGGTGTTGGG 59.084 52.381 0.00 0.00 0.00 4.12 F
3045 3305 2.159099 TCCACATCTATCTGACGGCAAC 60.159 50.000 0.00 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1841 2088 1.531149 CACTTGTAGCAACCAGTTCCG 59.469 52.381 0.00 0.00 29.45 4.30 R
1970 2220 3.976793 ATTCATGCAAGTTATCTGCCG 57.023 42.857 0.00 0.00 0.00 5.69 R
2807 3066 3.491766 AGTACTCCCTCCATTCCTCAA 57.508 47.619 0.00 0.00 0.00 3.02 R
3028 3288 0.855349 GCGTTGCCGTCAGATAGATG 59.145 55.000 0.00 0.00 36.15 2.90 R
3117 3567 4.250464 GTGTTACACATGGCTGCTAGTTA 58.750 43.478 10.96 0.00 34.08 2.24 R
3540 4035 4.833390 AGAGAAACATTCCCTAACTTCCG 58.167 43.478 0.00 0.00 0.00 4.30 R
5038 5561 0.630673 TCCTACATGCCATGGCCTTT 59.369 50.000 33.44 19.52 41.09 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.997395 ACACGATTGAAGCTTATGACAACT 59.003 37.500 0.00 0.00 0.00 3.16
62 63 3.471680 GACTTGTTCAGGCTTCAGAGTT 58.528 45.455 0.00 0.00 0.00 3.01
65 66 3.117491 TGTTCAGGCTTCAGAGTTCAG 57.883 47.619 0.00 0.00 0.00 3.02
66 67 2.700371 TGTTCAGGCTTCAGAGTTCAGA 59.300 45.455 0.00 0.00 0.00 3.27
70 71 3.006323 TCAGGCTTCAGAGTTCAGACTTC 59.994 47.826 0.00 0.00 35.88 3.01
223 224 2.224549 CGGTCAAAAACACTTATCCGCA 59.775 45.455 0.00 0.00 0.00 5.69
587 588 4.534794 GTTTGCATTTGAACTTGGTTGG 57.465 40.909 0.00 0.00 0.00 3.77
588 589 4.187694 GTTTGCATTTGAACTTGGTTGGA 58.812 39.130 0.00 0.00 0.00 3.53
589 590 4.686191 TTGCATTTGAACTTGGTTGGAT 57.314 36.364 0.00 0.00 0.00 3.41
590 591 3.992643 TGCATTTGAACTTGGTTGGATG 58.007 40.909 0.00 0.00 0.00 3.51
591 592 3.640498 TGCATTTGAACTTGGTTGGATGA 59.360 39.130 0.00 0.00 0.00 2.92
592 593 4.100653 TGCATTTGAACTTGGTTGGATGAA 59.899 37.500 0.00 0.00 0.00 2.57
593 594 4.448732 GCATTTGAACTTGGTTGGATGAAC 59.551 41.667 0.00 0.00 0.00 3.18
594 595 5.739935 GCATTTGAACTTGGTTGGATGAACT 60.740 40.000 0.00 0.00 34.66 3.01
595 596 5.930837 TTTGAACTTGGTTGGATGAACTT 57.069 34.783 0.00 0.00 34.66 2.66
596 597 4.916983 TGAACTTGGTTGGATGAACTTG 57.083 40.909 0.00 0.00 34.66 3.16
597 598 4.277476 TGAACTTGGTTGGATGAACTTGT 58.723 39.130 0.00 0.00 34.66 3.16
598 599 4.097741 TGAACTTGGTTGGATGAACTTGTG 59.902 41.667 0.00 0.00 34.66 3.33
599 600 2.958355 ACTTGGTTGGATGAACTTGTGG 59.042 45.455 0.00 0.00 34.66 4.17
600 601 1.993956 TGGTTGGATGAACTTGTGGG 58.006 50.000 0.00 0.00 34.66 4.61
601 602 0.603065 GGTTGGATGAACTTGTGGGC 59.397 55.000 0.00 0.00 34.66 5.36
602 603 1.327303 GTTGGATGAACTTGTGGGCA 58.673 50.000 0.00 0.00 0.00 5.36
603 604 1.895131 GTTGGATGAACTTGTGGGCAT 59.105 47.619 0.00 0.00 0.00 4.40
604 605 1.548081 TGGATGAACTTGTGGGCATG 58.452 50.000 0.00 0.00 0.00 4.06
605 606 1.075212 TGGATGAACTTGTGGGCATGA 59.925 47.619 0.00 0.00 0.00 3.07
606 607 2.291735 TGGATGAACTTGTGGGCATGAT 60.292 45.455 0.00 0.00 0.00 2.45
607 608 2.762327 GGATGAACTTGTGGGCATGATT 59.238 45.455 0.00 0.00 0.00 2.57
608 609 3.196254 GGATGAACTTGTGGGCATGATTT 59.804 43.478 0.00 0.00 0.00 2.17
609 610 4.322953 GGATGAACTTGTGGGCATGATTTT 60.323 41.667 0.00 0.00 0.00 1.82
610 611 3.992643 TGAACTTGTGGGCATGATTTTG 58.007 40.909 0.00 0.00 0.00 2.44
611 612 3.640498 TGAACTTGTGGGCATGATTTTGA 59.360 39.130 0.00 0.00 0.00 2.69
612 613 4.283978 TGAACTTGTGGGCATGATTTTGAT 59.716 37.500 0.00 0.00 0.00 2.57
613 614 4.196626 ACTTGTGGGCATGATTTTGATG 57.803 40.909 0.00 0.00 0.00 3.07
614 615 3.833650 ACTTGTGGGCATGATTTTGATGA 59.166 39.130 0.00 0.00 0.00 2.92
615 616 4.283978 ACTTGTGGGCATGATTTTGATGAA 59.716 37.500 0.00 0.00 0.00 2.57
616 617 4.191033 TGTGGGCATGATTTTGATGAAC 57.809 40.909 0.00 0.00 0.00 3.18
617 618 3.833650 TGTGGGCATGATTTTGATGAACT 59.166 39.130 0.00 0.00 0.00 3.01
618 619 4.283978 TGTGGGCATGATTTTGATGAACTT 59.716 37.500 0.00 0.00 0.00 2.66
619 620 4.628333 GTGGGCATGATTTTGATGAACTTG 59.372 41.667 0.00 0.00 0.00 3.16
620 621 4.283978 TGGGCATGATTTTGATGAACTTGT 59.716 37.500 0.00 0.00 0.00 3.16
621 622 4.628333 GGGCATGATTTTGATGAACTTGTG 59.372 41.667 0.00 0.00 0.00 3.33
622 623 4.628333 GGCATGATTTTGATGAACTTGTGG 59.372 41.667 0.00 0.00 0.00 4.17
623 624 4.628333 GCATGATTTTGATGAACTTGTGGG 59.372 41.667 0.00 0.00 0.00 4.61
624 625 4.255833 TGATTTTGATGAACTTGTGGGC 57.744 40.909 0.00 0.00 0.00 5.36
625 626 3.640498 TGATTTTGATGAACTTGTGGGCA 59.360 39.130 0.00 0.00 0.00 5.36
626 627 4.283978 TGATTTTGATGAACTTGTGGGCAT 59.716 37.500 0.00 0.00 0.00 4.40
627 628 3.663995 TTTGATGAACTTGTGGGCATG 57.336 42.857 0.00 0.00 0.00 4.06
628 629 2.583024 TGATGAACTTGTGGGCATGA 57.417 45.000 0.00 0.00 0.00 3.07
629 630 2.874014 TGATGAACTTGTGGGCATGAA 58.126 42.857 0.00 0.00 0.00 2.57
630 631 2.557924 TGATGAACTTGTGGGCATGAAC 59.442 45.455 0.00 0.00 0.00 3.18
631 632 2.363306 TGAACTTGTGGGCATGAACT 57.637 45.000 0.00 0.00 0.00 3.01
632 633 2.665165 TGAACTTGTGGGCATGAACTT 58.335 42.857 0.00 0.00 0.00 2.66
633 634 3.030291 TGAACTTGTGGGCATGAACTTT 58.970 40.909 0.00 0.00 0.00 2.66
634 635 3.450457 TGAACTTGTGGGCATGAACTTTT 59.550 39.130 0.00 0.00 0.00 2.27
635 636 4.646945 TGAACTTGTGGGCATGAACTTTTA 59.353 37.500 0.00 0.00 0.00 1.52
636 637 5.304101 TGAACTTGTGGGCATGAACTTTTAT 59.696 36.000 0.00 0.00 0.00 1.40
637 638 5.806654 ACTTGTGGGCATGAACTTTTATT 57.193 34.783 0.00 0.00 0.00 1.40
638 639 5.783111 ACTTGTGGGCATGAACTTTTATTC 58.217 37.500 0.00 0.00 0.00 1.75
639 640 5.304101 ACTTGTGGGCATGAACTTTTATTCA 59.696 36.000 0.00 0.00 42.62 2.57
641 642 5.964758 TGTGGGCATGAACTTTTATTCATC 58.035 37.500 0.00 0.00 44.30 2.92
642 643 5.479724 TGTGGGCATGAACTTTTATTCATCA 59.520 36.000 0.00 0.00 44.30 3.07
643 644 6.014755 TGTGGGCATGAACTTTTATTCATCAA 60.015 34.615 0.00 0.00 44.30 2.57
644 645 6.311200 GTGGGCATGAACTTTTATTCATCAAC 59.689 38.462 0.00 0.00 44.30 3.18
645 646 6.211184 TGGGCATGAACTTTTATTCATCAACT 59.789 34.615 0.00 0.00 44.30 3.16
646 647 7.099120 GGGCATGAACTTTTATTCATCAACTT 58.901 34.615 0.00 0.00 44.30 2.66
647 648 7.063780 GGGCATGAACTTTTATTCATCAACTTG 59.936 37.037 0.00 0.00 44.30 3.16
648 649 7.599998 GGCATGAACTTTTATTCATCAACTTGT 59.400 33.333 0.00 0.00 44.30 3.16
649 650 8.981647 GCATGAACTTTTATTCATCAACTTGTT 58.018 29.630 0.00 0.00 44.30 2.83
652 653 9.868277 TGAACTTTTATTCATCAACTTGTTTGT 57.132 25.926 0.00 0.00 33.77 2.83
654 655 9.651913 AACTTTTATTCATCAACTTGTTTGTGT 57.348 25.926 0.00 0.00 36.49 3.72
655 656 9.301153 ACTTTTATTCATCAACTTGTTTGTGTC 57.699 29.630 0.00 0.00 36.49 3.67
656 657 9.299963 CTTTTATTCATCAACTTGTTTGTGTCA 57.700 29.630 0.00 0.00 36.49 3.58
657 658 9.645059 TTTTATTCATCAACTTGTTTGTGTCAA 57.355 25.926 0.00 0.00 36.49 3.18
658 659 9.645059 TTTATTCATCAACTTGTTTGTGTCAAA 57.355 25.926 0.00 0.00 36.49 2.69
659 660 9.645059 TTATTCATCAACTTGTTTGTGTCAAAA 57.355 25.926 0.00 0.00 36.49 2.44
660 661 8.721019 ATTCATCAACTTGTTTGTGTCAAAAT 57.279 26.923 0.00 0.00 36.49 1.82
661 662 8.545229 TTCATCAACTTGTTTGTGTCAAAATT 57.455 26.923 0.00 0.00 36.49 1.82
662 663 8.545229 TCATCAACTTGTTTGTGTCAAAATTT 57.455 26.923 0.00 0.00 36.49 1.82
663 664 9.645059 TCATCAACTTGTTTGTGTCAAAATTTA 57.355 25.926 0.00 0.00 36.49 1.40
664 665 9.687717 CATCAACTTGTTTGTGTCAAAATTTAC 57.312 29.630 0.00 0.00 36.49 2.01
665 666 8.818141 TCAACTTGTTTGTGTCAAAATTTACA 57.182 26.923 0.00 0.00 36.49 2.41
666 667 9.429359 TCAACTTGTTTGTGTCAAAATTTACAT 57.571 25.926 0.00 0.00 36.49 2.29
667 668 9.475505 CAACTTGTTTGTGTCAAAATTTACATG 57.524 29.630 0.00 0.00 0.00 3.21
668 669 8.770438 ACTTGTTTGTGTCAAAATTTACATGT 57.230 26.923 2.69 2.69 0.00 3.21
669 670 9.213799 ACTTGTTTGTGTCAAAATTTACATGTT 57.786 25.926 2.30 0.00 0.00 2.71
670 671 9.687717 CTTGTTTGTGTCAAAATTTACATGTTC 57.312 29.630 2.30 0.00 0.00 3.18
671 672 8.763049 TGTTTGTGTCAAAATTTACATGTTCA 57.237 26.923 2.30 0.00 0.00 3.18
672 673 9.376075 TGTTTGTGTCAAAATTTACATGTTCAT 57.624 25.926 2.30 0.00 0.00 2.57
689 690 9.218440 ACATGTTCATTTTTGTCCAAAATATCC 57.782 29.630 6.06 0.00 42.28 2.59
690 691 9.217278 CATGTTCATTTTTGTCCAAAATATCCA 57.783 29.630 6.06 1.89 42.28 3.41
691 692 9.962809 ATGTTCATTTTTGTCCAAAATATCCAT 57.037 25.926 6.06 3.74 42.28 3.41
704 705 9.656040 TCCAAAATATCCATATATGCAAAATGC 57.344 29.630 7.24 0.00 45.29 3.56
705 706 8.885722 CCAAAATATCCATATATGCAAAATGCC 58.114 33.333 7.24 0.00 44.23 4.40
706 707 8.885722 CAAAATATCCATATATGCAAAATGCCC 58.114 33.333 7.24 0.00 44.23 5.36
707 708 4.724074 ATCCATATATGCAAAATGCCCG 57.276 40.909 7.24 0.00 44.23 6.13
708 709 2.824936 TCCATATATGCAAAATGCCCGG 59.175 45.455 7.24 0.00 44.23 5.73
709 710 2.609350 CATATATGCAAAATGCCCGGC 58.391 47.619 1.04 1.04 44.23 6.13
710 711 0.595588 TATATGCAAAATGCCCGGCG 59.404 50.000 4.58 0.00 44.23 6.46
711 712 1.106351 ATATGCAAAATGCCCGGCGA 61.106 50.000 9.30 0.00 44.23 5.54
712 713 1.723608 TATGCAAAATGCCCGGCGAG 61.724 55.000 9.30 0.00 44.23 5.03
713 714 3.747976 GCAAAATGCCCGGCGAGT 61.748 61.111 9.30 0.00 37.42 4.18
714 715 2.485122 CAAAATGCCCGGCGAGTC 59.515 61.111 9.30 0.00 0.00 3.36
715 716 3.124921 AAAATGCCCGGCGAGTCG 61.125 61.111 9.30 8.54 0.00 4.18
716 717 3.894547 AAAATGCCCGGCGAGTCGT 62.895 57.895 15.08 0.00 0.00 4.34
727 728 2.579787 GAGTCGTGCGCGCTGTAT 60.580 61.111 33.29 14.36 38.14 2.29
728 729 2.126071 AGTCGTGCGCGCTGTATT 60.126 55.556 33.29 12.39 38.14 1.89
729 730 1.683790 GAGTCGTGCGCGCTGTATTT 61.684 55.000 33.29 13.36 38.14 1.40
730 731 1.131826 GTCGTGCGCGCTGTATTTT 59.868 52.632 33.29 0.00 38.14 1.82
731 732 0.452122 GTCGTGCGCGCTGTATTTTT 60.452 50.000 33.29 0.00 38.14 1.94
732 733 0.451957 TCGTGCGCGCTGTATTTTTG 60.452 50.000 33.29 10.73 38.14 2.44
733 734 1.696083 GTGCGCGCTGTATTTTTGC 59.304 52.632 33.29 0.00 0.00 3.68
738 739 3.975992 CGCTGTATTTTTGCGCTCT 57.024 47.368 9.73 0.00 43.08 4.09
739 740 1.527696 CGCTGTATTTTTGCGCTCTG 58.472 50.000 9.73 0.00 43.08 3.35
740 741 1.262882 GCTGTATTTTTGCGCTCTGC 58.737 50.000 9.73 2.76 46.70 4.26
741 742 1.135575 GCTGTATTTTTGCGCTCTGCT 60.136 47.619 9.73 0.00 46.63 4.24
742 743 2.512885 CTGTATTTTTGCGCTCTGCTG 58.487 47.619 9.73 0.00 46.63 4.41
743 744 1.199789 TGTATTTTTGCGCTCTGCTGG 59.800 47.619 9.73 0.00 46.63 4.85
744 745 1.468520 GTATTTTTGCGCTCTGCTGGA 59.531 47.619 9.73 0.00 46.63 3.86
745 746 0.961019 ATTTTTGCGCTCTGCTGGAA 59.039 45.000 9.73 0.00 46.63 3.53
746 747 0.030638 TTTTTGCGCTCTGCTGGAAC 59.969 50.000 9.73 0.00 46.63 3.62
747 748 1.100463 TTTTGCGCTCTGCTGGAACA 61.100 50.000 9.73 0.00 46.63 3.18
766 767 4.146000 CACGCGCACGCTGCATTA 62.146 61.111 13.70 0.00 45.36 1.90
767 768 3.195002 ACGCGCACGCTGCATTAT 61.195 55.556 13.70 0.00 45.36 1.28
769 770 2.352686 GCGCACGCTGCATTATGG 60.353 61.111 7.96 0.00 45.36 2.74
777 778 1.960763 CTGCATTATGGCGCGGCTA 60.961 57.895 33.23 19.80 36.28 3.93
779 780 1.961277 GCATTATGGCGCGGCTACT 60.961 57.895 33.23 19.54 0.00 2.57
781 782 0.599991 CATTATGGCGCGGCTACTGA 60.600 55.000 33.23 13.60 0.00 3.41
782 783 0.105964 ATTATGGCGCGGCTACTGAA 59.894 50.000 33.23 18.74 0.00 3.02
791 792 2.434884 GCTACTGAAGCCAGCGCA 60.435 61.111 11.47 0.00 46.25 6.09
793 794 1.812922 CTACTGAAGCCAGCGCAGG 60.813 63.158 15.57 15.57 44.16 4.85
816 817 4.940593 GCGCAAAACCAGCCGCAA 62.941 61.111 0.30 0.00 33.78 4.85
817 818 3.029735 CGCAAAACCAGCCGCAAC 61.030 61.111 0.00 0.00 0.00 4.17
818 819 3.029735 GCAAAACCAGCCGCAACG 61.030 61.111 0.00 0.00 0.00 4.10
819 820 3.029735 CAAAACCAGCCGCAACGC 61.030 61.111 0.00 0.00 0.00 4.84
830 831 2.426098 GCAACGCGCGTGCTAAAA 60.426 55.556 38.44 0.00 39.65 1.52
831 832 2.417553 GCAACGCGCGTGCTAAAAG 61.418 57.895 38.44 19.82 39.65 2.27
832 833 1.792057 CAACGCGCGTGCTAAAAGG 60.792 57.895 38.44 14.22 39.65 3.11
833 834 2.248835 AACGCGCGTGCTAAAAGGT 61.249 52.632 38.44 14.97 39.65 3.50
834 835 1.778027 AACGCGCGTGCTAAAAGGTT 61.778 50.000 38.44 14.10 39.65 3.50
835 836 1.082366 CGCGCGTGCTAAAAGGTTT 60.082 52.632 24.19 0.00 39.65 3.27
836 837 0.659123 CGCGCGTGCTAAAAGGTTTT 60.659 50.000 24.19 0.00 39.65 2.43
837 838 1.483316 GCGCGTGCTAAAAGGTTTTT 58.517 45.000 15.02 0.00 38.39 1.94
865 866 2.931386 GCTATAGCGCGGCTGTTG 59.069 61.111 9.40 6.33 40.10 3.33
866 867 2.598632 GCTATAGCGCGGCTGTTGG 61.599 63.158 9.40 1.78 40.10 3.77
867 868 1.067416 CTATAGCGCGGCTGTTGGA 59.933 57.895 8.83 0.00 40.10 3.53
868 869 0.941463 CTATAGCGCGGCTGTTGGAG 60.941 60.000 8.83 0.00 40.10 3.86
869 870 1.388837 TATAGCGCGGCTGTTGGAGA 61.389 55.000 8.83 0.00 40.10 3.71
870 871 2.032860 ATAGCGCGGCTGTTGGAGAT 62.033 55.000 8.83 0.00 40.10 2.75
871 872 2.906182 TAGCGCGGCTGTTGGAGATG 62.906 60.000 8.83 0.00 40.10 2.90
872 873 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
873 874 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
874 875 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
875 876 1.220206 CGGCTGTTGGAGATGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
876 877 1.088340 CGGCTGTTGGAGATGCTCTG 61.088 60.000 0.00 0.00 0.00 3.35
877 878 0.251354 GGCTGTTGGAGATGCTCTGA 59.749 55.000 0.00 0.00 0.00 3.27
878 879 1.339438 GGCTGTTGGAGATGCTCTGAA 60.339 52.381 0.00 0.00 0.00 3.02
895 896 0.108019 GAAACCACACCCCTCTTCGT 59.892 55.000 0.00 0.00 0.00 3.85
897 898 2.095978 AACCACACCCCTCTTCGTCG 62.096 60.000 0.00 0.00 0.00 5.12
898 899 2.261671 CACACCCCTCTTCGTCGG 59.738 66.667 0.00 0.00 0.00 4.79
900 901 4.452733 CACCCCTCTTCGTCGGCC 62.453 72.222 0.00 0.00 0.00 6.13
905 906 4.065281 CTCTTCGTCGGCCCCGTT 62.065 66.667 6.61 0.00 40.74 4.44
906 907 2.676121 TCTTCGTCGGCCCCGTTA 60.676 61.111 6.61 0.00 40.74 3.18
907 908 2.507769 CTTCGTCGGCCCCGTTAC 60.508 66.667 6.61 0.00 40.74 2.50
908 909 2.990967 TTCGTCGGCCCCGTTACT 60.991 61.111 6.61 0.00 40.74 2.24
914 915 1.449070 CGGCCCCGTTACTTTCCTC 60.449 63.158 0.00 0.00 34.35 3.71
929 930 2.125512 CTCTCCTTTCCCACGCCG 60.126 66.667 0.00 0.00 0.00 6.46
951 952 2.824041 CCAACCCAATCCTCGCGG 60.824 66.667 6.13 0.00 0.00 6.46
1038 1259 1.153745 GCAGCTCAACCTCGACGAT 60.154 57.895 0.00 0.00 0.00 3.73
1120 1341 2.657296 CATACGGGTACGCGCCTG 60.657 66.667 29.56 22.33 46.04 4.85
1144 1365 1.543690 CCCTCAATCCCAATCCCCC 59.456 63.158 0.00 0.00 0.00 5.40
1288 1520 4.719369 GACAACGAGCGCGAGGGT 62.719 66.667 19.05 11.15 41.64 4.34
1422 1663 0.694771 TCCTCAAGAAGCTGCACCAT 59.305 50.000 1.02 0.00 0.00 3.55
1452 1693 1.561643 TCCAGCTCAAGGAGATCGTT 58.438 50.000 0.00 0.00 0.00 3.85
1478 1719 2.434336 CCCCAGGTTCGACTAATCATCA 59.566 50.000 0.00 0.00 0.00 3.07
1495 1736 5.139435 TCATCACACGAATCAGAAGAACT 57.861 39.130 0.00 0.00 0.00 3.01
1503 1744 6.075918 CACGAATCAGAAGAACTTCATGTTG 58.924 40.000 15.43 6.34 41.84 3.33
1505 1746 5.409520 CGAATCAGAAGAACTTCATGTTGGA 59.590 40.000 15.43 5.02 41.84 3.53
1541 1782 2.642171 TCCAGAGGACTAATGGGTGT 57.358 50.000 3.91 0.00 34.71 4.16
1542 1783 2.915869 TCCAGAGGACTAATGGGTGTT 58.084 47.619 3.91 0.00 34.71 3.32
1543 1784 2.571653 TCCAGAGGACTAATGGGTGTTG 59.428 50.000 3.91 0.00 34.71 3.33
1544 1785 2.356125 CCAGAGGACTAATGGGTGTTGG 60.356 54.545 0.00 0.00 0.00 3.77
1545 1786 1.916181 AGAGGACTAATGGGTGTTGGG 59.084 52.381 0.00 0.00 0.00 4.12
1841 2088 7.807977 AAACCATCCATAAGTGTATGATGAC 57.192 36.000 0.00 0.00 39.72 3.06
1844 2091 5.279456 CCATCCATAAGTGTATGATGACGGA 60.279 44.000 0.00 0.00 39.72 4.69
1970 2220 8.981724 TGCATCGTGATATTAAAGGTATCTAC 57.018 34.615 0.00 0.00 31.38 2.59
1977 2227 8.251721 GTGATATTAAAGGTATCTACGGCAGAT 58.748 37.037 6.95 6.95 46.19 2.90
1994 2244 5.413499 GGCAGATAACTTGCATGAATTTGT 58.587 37.500 6.60 0.00 0.00 2.83
2009 2259 7.116662 GCATGAATTTGTGTGTTATGTTGTGAT 59.883 33.333 0.00 0.00 0.00 3.06
2010 2260 7.927305 TGAATTTGTGTGTTATGTTGTGATG 57.073 32.000 0.00 0.00 0.00 3.07
2227 2477 6.100004 GTCTTGCAAGTTATCTAGTGCAGTA 58.900 40.000 25.19 0.37 46.80 2.74
2230 2480 8.474831 TCTTGCAAGTTATCTAGTGCAGTATTA 58.525 33.333 25.19 0.00 46.80 0.98
2255 2505 5.893897 AATTGGATCTTGCTGACTCTTTC 57.106 39.130 0.00 0.00 0.00 2.62
2446 2705 9.806203 TTATTTTTATCAATTGCTGTGATGAGG 57.194 29.630 0.00 0.00 36.41 3.86
2457 2716 8.668510 ATTGCTGTGATGAGGTTAGTTATTAG 57.331 34.615 0.00 0.00 0.00 1.73
2479 2738 6.633325 AGCATAATCCCTATTAGCTGTCAT 57.367 37.500 0.00 0.00 34.04 3.06
2567 2826 9.607333 TGATTATGGAGAGACTTGGAATATACT 57.393 33.333 0.00 0.00 0.00 2.12
2569 2828 6.926630 ATGGAGAGACTTGGAATATACTCC 57.073 41.667 0.00 0.00 41.77 3.85
2570 2829 5.148502 TGGAGAGACTTGGAATATACTCCC 58.851 45.833 0.00 0.00 41.03 4.30
2571 2830 5.103043 TGGAGAGACTTGGAATATACTCCCT 60.103 44.000 0.00 0.00 41.03 4.20
2572 2831 5.479027 GGAGAGACTTGGAATATACTCCCTC 59.521 48.000 0.00 0.00 37.34 4.30
2573 2832 5.399113 AGAGACTTGGAATATACTCCCTCC 58.601 45.833 0.00 0.00 34.22 4.30
2574 2833 5.103043 AGAGACTTGGAATATACTCCCTCCA 60.103 44.000 0.00 0.00 36.16 3.86
2575 2834 5.731924 AGACTTGGAATATACTCCCTCCAT 58.268 41.667 0.00 0.00 37.78 3.41
2576 2835 6.153924 AGACTTGGAATATACTCCCTCCATT 58.846 40.000 0.00 0.00 37.78 3.16
2577 2836 6.271159 AGACTTGGAATATACTCCCTCCATTC 59.729 42.308 0.00 0.00 37.78 2.67
2578 2837 5.310857 ACTTGGAATATACTCCCTCCATTCC 59.689 44.000 0.00 4.98 43.24 3.01
2579 2838 5.106631 TGGAATATACTCCCTCCATTCCT 57.893 43.478 11.69 0.00 43.30 3.36
2580 2839 6.241223 TGGAATATACTCCCTCCATTCCTA 57.759 41.667 11.69 0.00 43.30 2.94
2581 2840 6.639938 TGGAATATACTCCCTCCATTCCTAA 58.360 40.000 11.69 0.00 43.30 2.69
2582 2841 7.086260 TGGAATATACTCCCTCCATTCCTAAA 58.914 38.462 11.69 0.00 43.30 1.85
2583 2842 7.744068 TGGAATATACTCCCTCCATTCCTAAAT 59.256 37.037 11.69 0.00 43.30 1.40
2584 2843 9.280456 GGAATATACTCCCTCCATTCCTAAATA 57.720 37.037 4.73 0.00 40.89 1.40
2589 2848 7.575499 ACTCCCTCCATTCCTAAATATAAGG 57.425 40.000 0.00 0.00 35.26 2.69
2590 2849 7.089566 ACTCCCTCCATTCCTAAATATAAGGT 58.910 38.462 4.41 0.00 35.48 3.50
2591 2850 7.017651 ACTCCCTCCATTCCTAAATATAAGGTG 59.982 40.741 4.41 0.00 35.48 4.00
2592 2851 6.855061 TCCCTCCATTCCTAAATATAAGGTGT 59.145 38.462 4.41 0.00 35.48 4.16
2593 2852 8.020253 TCCCTCCATTCCTAAATATAAGGTGTA 58.980 37.037 4.41 0.00 35.48 2.90
2594 2853 8.836735 CCCTCCATTCCTAAATATAAGGTGTAT 58.163 37.037 4.41 0.00 35.48 2.29
2632 2891 7.907214 AGTCAACTGTTATCTATGTTTGACC 57.093 36.000 7.71 0.00 0.00 4.02
2633 2892 7.450074 AGTCAACTGTTATCTATGTTTGACCA 58.550 34.615 7.71 0.00 0.00 4.02
2634 2893 7.936847 AGTCAACTGTTATCTATGTTTGACCAA 59.063 33.333 7.71 0.00 0.00 3.67
2635 2894 8.230486 GTCAACTGTTATCTATGTTTGACCAAG 58.770 37.037 0.00 0.00 0.00 3.61
2636 2895 7.936847 TCAACTGTTATCTATGTTTGACCAAGT 59.063 33.333 0.00 0.00 0.00 3.16
2637 2896 8.567948 CAACTGTTATCTATGTTTGACCAAGTT 58.432 33.333 0.00 0.00 0.00 2.66
2638 2897 8.691661 ACTGTTATCTATGTTTGACCAAGTTT 57.308 30.769 0.00 0.00 0.00 2.66
2639 2898 9.787435 ACTGTTATCTATGTTTGACCAAGTTTA 57.213 29.630 0.00 0.00 0.00 2.01
2641 2900 9.562408 TGTTATCTATGTTTGACCAAGTTTACA 57.438 29.630 0.00 0.00 0.00 2.41
2643 2902 6.554334 TCTATGTTTGACCAAGTTTACAGC 57.446 37.500 0.00 0.00 0.00 4.40
2644 2903 6.058833 TCTATGTTTGACCAAGTTTACAGCA 58.941 36.000 0.00 0.00 0.00 4.41
2645 2904 5.590530 ATGTTTGACCAAGTTTACAGCAA 57.409 34.783 0.00 0.00 0.00 3.91
2646 2905 5.392767 TGTTTGACCAAGTTTACAGCAAA 57.607 34.783 0.00 0.00 0.00 3.68
2647 2906 5.784177 TGTTTGACCAAGTTTACAGCAAAA 58.216 33.333 0.00 0.00 0.00 2.44
2648 2907 6.402222 TGTTTGACCAAGTTTACAGCAAAAT 58.598 32.000 0.00 0.00 0.00 1.82
2649 2908 7.548097 TGTTTGACCAAGTTTACAGCAAAATA 58.452 30.769 0.00 0.00 0.00 1.40
2650 2909 8.200792 TGTTTGACCAAGTTTACAGCAAAATAT 58.799 29.630 0.00 0.00 0.00 1.28
2651 2910 9.685828 GTTTGACCAAGTTTACAGCAAAATATA 57.314 29.630 0.00 0.00 0.00 0.86
2653 2912 9.853555 TTGACCAAGTTTACAGCAAAATATATG 57.146 29.630 0.00 0.00 0.00 1.78
2654 2913 9.237187 TGACCAAGTTTACAGCAAAATATATGA 57.763 29.630 0.00 0.00 0.00 2.15
2770 3029 9.616156 TTGTCTATAAACTTGGTCAAACTTACA 57.384 29.630 0.00 0.00 0.00 2.41
2771 3030 9.268268 TGTCTATAAACTTGGTCAAACTTACAG 57.732 33.333 0.00 0.00 0.00 2.74
2772 3031 9.485206 GTCTATAAACTTGGTCAAACTTACAGA 57.515 33.333 0.00 0.00 0.00 3.41
2790 3049 9.974980 ACTTACAGAAGTTTGACTTTTTGAAAA 57.025 25.926 10.97 0.00 43.70 2.29
2820 3079 6.192970 ACACCTTATATTGAGGAATGGAGG 57.807 41.667 10.81 0.00 37.72 4.30
2821 3080 5.073691 ACACCTTATATTGAGGAATGGAGGG 59.926 44.000 10.81 0.00 37.72 4.30
2822 3081 5.310594 CACCTTATATTGAGGAATGGAGGGA 59.689 44.000 10.81 0.00 37.72 4.20
2823 3082 5.549619 ACCTTATATTGAGGAATGGAGGGAG 59.450 44.000 10.81 0.00 37.72 4.30
2969 3229 4.333926 GGTAAAGAGAAACTAGCAGCCATG 59.666 45.833 0.00 0.00 0.00 3.66
2972 3232 2.304180 AGAGAAACTAGCAGCCATGTGT 59.696 45.455 0.00 0.00 0.00 3.72
2973 3233 2.417933 GAGAAACTAGCAGCCATGTGTG 59.582 50.000 0.00 0.00 0.00 3.82
3020 3280 8.165239 ACTAGAGATTGTACAATGTTGCAAAA 57.835 30.769 25.42 0.00 0.00 2.44
3028 3288 7.881643 TGTACAATGTTGCAAAATTATCCAC 57.118 32.000 14.52 10.18 0.00 4.02
3045 3305 2.159099 TCCACATCTATCTGACGGCAAC 60.159 50.000 0.00 0.00 0.00 4.17
3070 3520 7.919621 ACGCATCCTACTATTTTTGTACTACTC 59.080 37.037 0.00 0.00 0.00 2.59
3073 3523 7.338800 TCCTACTATTTTTGTACTACTCGGG 57.661 40.000 0.00 0.00 0.00 5.14
3087 3537 8.330993 TGTACTACTCGGGGAATATATGTCATA 58.669 37.037 0.00 0.00 0.00 2.15
3105 3555 7.870509 TGTCATAATTTGAAGCTAGAGCATT 57.129 32.000 4.01 0.00 45.16 3.56
3117 3567 4.952335 AGCTAGAGCATTTAGGCAAACATT 59.048 37.500 4.01 0.00 45.16 2.71
3290 3784 4.768448 TCCTACAACAAATCGTACTCAGGA 59.232 41.667 0.00 0.00 0.00 3.86
3398 3892 6.972328 GTGAAAATGTTGCTCTTGTTAGTTCA 59.028 34.615 0.00 0.00 0.00 3.18
3410 3904 7.459394 TCTTGTTAGTTCAAACACTCTTACG 57.541 36.000 0.00 0.00 39.02 3.18
3533 4028 2.688507 AGTGCACCAATCTCGTTGTAG 58.311 47.619 14.63 0.00 36.01 2.74
3540 4035 5.671329 GCACCAATCTCGTTGTAGATGTTTC 60.671 44.000 0.00 0.00 36.34 2.78
3556 4051 4.360951 TGTTTCGGAAGTTAGGGAATGT 57.639 40.909 0.00 0.00 0.00 2.71
3609 4104 3.314307 ACTCCTCCGTCCTCATTCATA 57.686 47.619 0.00 0.00 0.00 2.15
3651 4146 1.088306 TGTGCGTGGTTCTTTTCGTT 58.912 45.000 0.00 0.00 0.00 3.85
3768 4273 7.113544 GTGTATTTGTTCTAAGCTTGAACTTGC 59.886 37.037 27.07 19.72 42.86 4.01
3774 4279 4.060900 TCTAAGCTTGAACTTGCAGTCTG 58.939 43.478 9.86 0.00 0.00 3.51
3793 4298 3.118992 TCTGCTGCAATCGTGAGTAATCT 60.119 43.478 3.02 0.00 0.00 2.40
3796 4301 2.279741 TGCAATCGTGAGTAATCTGCC 58.720 47.619 0.00 0.00 0.00 4.85
3812 4317 8.270744 AGTAATCTGCCTGTCTCTGATATTTTT 58.729 33.333 0.00 0.00 0.00 1.94
4132 4644 8.500773 CGTCAAAGGTATAGTTGCTTCTTTTTA 58.499 33.333 0.00 0.00 0.00 1.52
4177 4691 5.163834 GCTTTGATATGCAAATGGTTTGTGG 60.164 40.000 0.00 0.00 44.90 4.17
4189 4703 0.249868 GTTTGTGGGCCTGGCTTTTC 60.250 55.000 19.68 7.59 0.00 2.29
4197 4711 2.446435 GGCCTGGCTTTTCTGTTCATA 58.554 47.619 19.68 0.00 0.00 2.15
4213 4727 6.597672 TCTGTTCATATTTTCGTAACTGCCAT 59.402 34.615 0.00 0.00 0.00 4.40
4216 4730 8.085296 TGTTCATATTTTCGTAACTGCCATTTT 58.915 29.630 0.00 0.00 0.00 1.82
4363 4880 2.555227 GCCTTTTCCATTCCCTGACTCA 60.555 50.000 0.00 0.00 0.00 3.41
4389 4906 6.003950 GGCTTGCCATAATCATCCTAAGTTA 58.996 40.000 6.79 0.00 0.00 2.24
4447 4964 6.070767 TGGTGTCCATTTTCCTTTTGTGTTTA 60.071 34.615 0.00 0.00 0.00 2.01
4451 4968 6.478673 GTCCATTTTCCTTTTGTGTTTACTGG 59.521 38.462 0.00 0.00 0.00 4.00
4472 4989 2.030007 GTGCAGCTTGCCAAAGTATGAA 60.030 45.455 5.82 0.00 44.23 2.57
4493 5010 5.521372 TGAAGCTTCACATGAATATCAGACG 59.479 40.000 25.16 0.00 33.01 4.18
4613 5130 2.223971 CCAGCAATCAGGCCATCAAATC 60.224 50.000 5.01 0.00 0.00 2.17
4640 5157 1.458486 CCAGCCTACCAACAACCCA 59.542 57.895 0.00 0.00 0.00 4.51
4665 5182 0.033796 ACCAATGGCATCTGGGTCAG 60.034 55.000 23.45 7.18 37.00 3.51
4666 5183 0.754217 CCAATGGCATCTGGGTCAGG 60.754 60.000 16.32 1.13 31.51 3.86
5063 5586 2.313317 CCATGGCATGTAGGAATTGCT 58.687 47.619 24.80 4.41 36.62 3.91
5201 5727 4.131596 TGGGAAGTTTTAGTTTCGTCCTG 58.868 43.478 0.00 0.00 32.12 3.86
5205 5731 5.120363 GGAAGTTTTAGTTTCGTCCTGCTAG 59.880 44.000 0.00 0.00 0.00 3.42
5223 5756 8.198109 TCCTGCTAGTAAGTTTGATCAACTATC 58.802 37.037 7.89 3.26 45.77 2.08
5258 5792 8.752005 AAAATATAGCAACATCTGTACACCAT 57.248 30.769 0.00 0.00 0.00 3.55
5261 5795 9.658799 AATATAGCAACATCTGTACACCATATC 57.341 33.333 0.00 0.00 0.00 1.63
5306 5840 8.638685 ATTTTCATATTTGTTGCTGTAGATGC 57.361 30.769 0.00 0.00 0.00 3.91
5309 5843 7.482654 TCATATTTGTTGCTGTAGATGCTAC 57.517 36.000 0.00 0.00 36.87 3.58
5310 5844 7.275183 TCATATTTGTTGCTGTAGATGCTACT 58.725 34.615 6.21 0.00 37.15 2.57
5311 5845 7.439356 TCATATTTGTTGCTGTAGATGCTACTC 59.561 37.037 6.21 0.03 37.15 2.59
5312 5846 3.526931 TGTTGCTGTAGATGCTACTCC 57.473 47.619 6.21 0.00 37.15 3.85
5313 5847 2.168521 TGTTGCTGTAGATGCTACTCCC 59.831 50.000 6.21 0.00 37.15 4.30
5314 5848 2.432510 GTTGCTGTAGATGCTACTCCCT 59.567 50.000 6.21 0.00 34.37 4.20
5315 5849 2.311463 TGCTGTAGATGCTACTCCCTC 58.689 52.381 6.21 0.00 0.00 4.30
5316 5850 1.616374 GCTGTAGATGCTACTCCCTCC 59.384 57.143 6.21 0.00 0.00 4.30
5317 5851 1.883275 CTGTAGATGCTACTCCCTCCG 59.117 57.143 6.21 0.00 0.00 4.63
5318 5852 1.214673 TGTAGATGCTACTCCCTCCGT 59.785 52.381 6.21 0.00 0.00 4.69
5319 5853 1.881324 GTAGATGCTACTCCCTCCGTC 59.119 57.143 0.00 0.00 0.00 4.79
5320 5854 0.259065 AGATGCTACTCCCTCCGTCA 59.741 55.000 0.00 0.00 0.00 4.35
5321 5855 0.386113 GATGCTACTCCCTCCGTCAC 59.614 60.000 0.00 0.00 0.00 3.67
5322 5856 0.324368 ATGCTACTCCCTCCGTCACA 60.324 55.000 0.00 0.00 0.00 3.58
5323 5857 0.324368 TGCTACTCCCTCCGTCACAT 60.324 55.000 0.00 0.00 0.00 3.21
5324 5858 1.064240 TGCTACTCCCTCCGTCACATA 60.064 52.381 0.00 0.00 0.00 2.29
5325 5859 1.337387 GCTACTCCCTCCGTCACATAC 59.663 57.143 0.00 0.00 0.00 2.39
5326 5860 2.651455 CTACTCCCTCCGTCACATACA 58.349 52.381 0.00 0.00 0.00 2.29
5327 5861 1.183549 ACTCCCTCCGTCACATACAC 58.816 55.000 0.00 0.00 0.00 2.90
5328 5862 1.272536 ACTCCCTCCGTCACATACACT 60.273 52.381 0.00 0.00 0.00 3.55
5329 5863 1.135139 CTCCCTCCGTCACATACACTG 59.865 57.143 0.00 0.00 0.00 3.66
5330 5864 0.175760 CCCTCCGTCACATACACTGG 59.824 60.000 0.00 0.00 0.00 4.00
5331 5865 0.895530 CCTCCGTCACATACACTGGT 59.104 55.000 0.00 0.00 0.00 4.00
5332 5866 1.404181 CCTCCGTCACATACACTGGTG 60.404 57.143 0.00 0.00 36.36 4.17
5333 5867 1.272490 CTCCGTCACATACACTGGTGT 59.728 52.381 11.20 11.20 46.87 4.16
5370 5904 4.798585 TGGGACAGCGGGAATAGA 57.201 55.556 0.00 0.00 0.00 1.98
5371 5905 3.000002 TGGGACAGCGGGAATAGAA 58.000 52.632 0.00 0.00 0.00 2.10
5374 5908 2.241176 TGGGACAGCGGGAATAGAATTT 59.759 45.455 0.00 0.00 0.00 1.82
5434 5973 9.565213 GAGTTAATTTGAAATGGAGAGAATGTG 57.435 33.333 0.00 0.00 0.00 3.21
5435 5974 8.031277 AGTTAATTTGAAATGGAGAGAATGTGC 58.969 33.333 0.00 0.00 0.00 4.57
5437 5976 5.381174 TTTGAAATGGAGAGAATGTGCTG 57.619 39.130 0.00 0.00 0.00 4.41
5439 5978 3.009363 TGAAATGGAGAGAATGTGCTGGA 59.991 43.478 0.00 0.00 0.00 3.86
5440 5979 3.726557 AATGGAGAGAATGTGCTGGAA 57.273 42.857 0.00 0.00 0.00 3.53
5441 5980 3.947612 ATGGAGAGAATGTGCTGGAAT 57.052 42.857 0.00 0.00 0.00 3.01
5442 5981 3.726557 TGGAGAGAATGTGCTGGAATT 57.273 42.857 0.00 0.00 0.00 2.17
5444 5983 4.410099 TGGAGAGAATGTGCTGGAATTTT 58.590 39.130 0.00 0.00 0.00 1.82
5445 5984 4.834496 TGGAGAGAATGTGCTGGAATTTTT 59.166 37.500 0.00 0.00 0.00 1.94
5446 5985 6.009589 TGGAGAGAATGTGCTGGAATTTTTA 58.990 36.000 0.00 0.00 0.00 1.52
5447 5986 6.151648 TGGAGAGAATGTGCTGGAATTTTTAG 59.848 38.462 0.00 0.00 0.00 1.85
5448 5987 6.405176 GGAGAGAATGTGCTGGAATTTTTAGG 60.405 42.308 0.00 0.00 0.00 2.69
5449 5988 6.248433 AGAGAATGTGCTGGAATTTTTAGGA 58.752 36.000 0.00 0.00 0.00 2.94
5450 5989 6.376581 AGAGAATGTGCTGGAATTTTTAGGAG 59.623 38.462 0.00 0.00 0.00 3.69
5451 5990 6.012745 AGAATGTGCTGGAATTTTTAGGAGT 58.987 36.000 0.00 0.00 0.00 3.85
5452 5991 6.494835 AGAATGTGCTGGAATTTTTAGGAGTT 59.505 34.615 0.00 0.00 0.00 3.01
5454 5993 7.775053 ATGTGCTGGAATTTTTAGGAGTTAA 57.225 32.000 0.00 0.00 0.00 2.01
5455 5994 7.589958 TGTGCTGGAATTTTTAGGAGTTAAA 57.410 32.000 0.00 0.00 0.00 1.52
5456 5995 8.012957 TGTGCTGGAATTTTTAGGAGTTAAAA 57.987 30.769 0.00 0.00 38.99 1.52
5458 5997 9.140286 GTGCTGGAATTTTTAGGAGTTAAAATC 57.860 33.333 0.00 0.00 40.08 2.17
5460 5999 9.929180 GCTGGAATTTTTAGGAGTTAAAATCTT 57.071 29.630 0.00 0.00 40.08 2.40
5514 6075 7.651027 ATTCCAGGATTTCTAGGTTGAAATG 57.349 36.000 7.13 0.00 43.97 2.32
5984 6565 1.814586 CGACGAGTAGCCCGACTCT 60.815 63.158 8.81 0.00 43.18 3.24
5985 6566 1.722677 GACGAGTAGCCCGACTCTG 59.277 63.158 8.81 5.75 43.18 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.878953 AAGCTTCAATCGTGTCCGTT 58.121 45.000 0.00 0.00 35.01 4.44
30 31 1.955778 TGAACAAGTCGAGTCGGGTTA 59.044 47.619 13.54 0.00 0.00 2.85
62 63 2.812658 TGGAGATGCTCTGAAGTCTGA 58.187 47.619 0.00 0.00 0.00 3.27
65 66 3.260740 CTGTTGGAGATGCTCTGAAGTC 58.739 50.000 0.00 0.00 0.00 3.01
66 67 2.614987 GCTGTTGGAGATGCTCTGAAGT 60.615 50.000 0.00 0.00 0.00 3.01
70 71 1.088340 CGGCTGTTGGAGATGCTCTG 61.088 60.000 0.00 0.00 0.00 3.35
180 181 2.125431 CCCAACCCGTTATCGCGT 60.125 61.111 5.77 0.00 35.54 6.01
223 224 1.743995 GGCGCTCCAAATACACCGT 60.744 57.895 7.64 0.00 0.00 4.83
566 567 4.187694 TCCAACCAAGTTCAAATGCAAAC 58.812 39.130 0.00 0.00 0.00 2.93
567 568 4.478206 TCCAACCAAGTTCAAATGCAAA 57.522 36.364 0.00 0.00 0.00 3.68
568 569 4.100653 TCATCCAACCAAGTTCAAATGCAA 59.899 37.500 0.00 0.00 0.00 4.08
569 570 3.640498 TCATCCAACCAAGTTCAAATGCA 59.360 39.130 0.00 0.00 0.00 3.96
570 571 4.255833 TCATCCAACCAAGTTCAAATGC 57.744 40.909 0.00 0.00 0.00 3.56
571 572 5.846203 AGTTCATCCAACCAAGTTCAAATG 58.154 37.500 0.00 0.00 35.28 2.32
572 573 6.127083 ACAAGTTCATCCAACCAAGTTCAAAT 60.127 34.615 0.00 0.00 35.28 2.32
573 574 5.186797 ACAAGTTCATCCAACCAAGTTCAAA 59.813 36.000 0.00 0.00 35.28 2.69
574 575 4.709397 ACAAGTTCATCCAACCAAGTTCAA 59.291 37.500 0.00 0.00 35.28 2.69
575 576 4.097741 CACAAGTTCATCCAACCAAGTTCA 59.902 41.667 0.00 0.00 35.28 3.18
576 577 4.499696 CCACAAGTTCATCCAACCAAGTTC 60.500 45.833 0.00 0.00 35.28 3.01
577 578 3.384467 CCACAAGTTCATCCAACCAAGTT 59.616 43.478 0.00 0.00 35.28 2.66
578 579 2.958355 CCACAAGTTCATCCAACCAAGT 59.042 45.455 0.00 0.00 35.28 3.16
579 580 2.297033 CCCACAAGTTCATCCAACCAAG 59.703 50.000 0.00 0.00 35.28 3.61
580 581 2.315176 CCCACAAGTTCATCCAACCAA 58.685 47.619 0.00 0.00 35.28 3.67
581 582 1.993956 CCCACAAGTTCATCCAACCA 58.006 50.000 0.00 0.00 35.28 3.67
582 583 0.603065 GCCCACAAGTTCATCCAACC 59.397 55.000 0.00 0.00 35.28 3.77
583 584 1.327303 TGCCCACAAGTTCATCCAAC 58.673 50.000 0.00 0.00 34.86 3.77
584 585 1.894466 CATGCCCACAAGTTCATCCAA 59.106 47.619 0.00 0.00 0.00 3.53
585 586 1.075212 TCATGCCCACAAGTTCATCCA 59.925 47.619 0.00 0.00 0.00 3.41
586 587 1.838112 TCATGCCCACAAGTTCATCC 58.162 50.000 0.00 0.00 0.00 3.51
587 588 4.460948 AAATCATGCCCACAAGTTCATC 57.539 40.909 0.00 0.00 0.00 2.92
588 589 4.283978 TCAAAATCATGCCCACAAGTTCAT 59.716 37.500 0.00 0.00 0.00 2.57
589 590 3.640498 TCAAAATCATGCCCACAAGTTCA 59.360 39.130 0.00 0.00 0.00 3.18
590 591 4.255833 TCAAAATCATGCCCACAAGTTC 57.744 40.909 0.00 0.00 0.00 3.01
591 592 4.283978 TCATCAAAATCATGCCCACAAGTT 59.716 37.500 0.00 0.00 0.00 2.66
592 593 3.833650 TCATCAAAATCATGCCCACAAGT 59.166 39.130 0.00 0.00 0.00 3.16
593 594 4.459390 TCATCAAAATCATGCCCACAAG 57.541 40.909 0.00 0.00 0.00 3.16
594 595 4.283978 AGTTCATCAAAATCATGCCCACAA 59.716 37.500 0.00 0.00 0.00 3.33
595 596 3.833650 AGTTCATCAAAATCATGCCCACA 59.166 39.130 0.00 0.00 0.00 4.17
596 597 4.460948 AGTTCATCAAAATCATGCCCAC 57.539 40.909 0.00 0.00 0.00 4.61
597 598 4.283978 ACAAGTTCATCAAAATCATGCCCA 59.716 37.500 0.00 0.00 0.00 5.36
598 599 4.628333 CACAAGTTCATCAAAATCATGCCC 59.372 41.667 0.00 0.00 0.00 5.36
599 600 4.628333 CCACAAGTTCATCAAAATCATGCC 59.372 41.667 0.00 0.00 0.00 4.40
600 601 4.628333 CCCACAAGTTCATCAAAATCATGC 59.372 41.667 0.00 0.00 0.00 4.06
601 602 4.628333 GCCCACAAGTTCATCAAAATCATG 59.372 41.667 0.00 0.00 0.00 3.07
602 603 4.283978 TGCCCACAAGTTCATCAAAATCAT 59.716 37.500 0.00 0.00 0.00 2.45
603 604 3.640498 TGCCCACAAGTTCATCAAAATCA 59.360 39.130 0.00 0.00 0.00 2.57
604 605 4.255833 TGCCCACAAGTTCATCAAAATC 57.744 40.909 0.00 0.00 0.00 2.17
605 606 4.283978 TCATGCCCACAAGTTCATCAAAAT 59.716 37.500 0.00 0.00 0.00 1.82
606 607 3.640498 TCATGCCCACAAGTTCATCAAAA 59.360 39.130 0.00 0.00 0.00 2.44
607 608 3.229293 TCATGCCCACAAGTTCATCAAA 58.771 40.909 0.00 0.00 0.00 2.69
608 609 2.874014 TCATGCCCACAAGTTCATCAA 58.126 42.857 0.00 0.00 0.00 2.57
609 610 2.557924 GTTCATGCCCACAAGTTCATCA 59.442 45.455 0.00 0.00 0.00 3.07
610 611 2.821969 AGTTCATGCCCACAAGTTCATC 59.178 45.455 0.00 0.00 0.00 2.92
611 612 2.880443 AGTTCATGCCCACAAGTTCAT 58.120 42.857 0.00 0.00 0.00 2.57
612 613 2.363306 AGTTCATGCCCACAAGTTCA 57.637 45.000 0.00 0.00 0.00 3.18
613 614 3.733443 AAAGTTCATGCCCACAAGTTC 57.267 42.857 0.00 0.00 0.00 3.01
614 615 5.806654 ATAAAAGTTCATGCCCACAAGTT 57.193 34.783 0.00 0.00 0.00 2.66
615 616 5.304101 TGAATAAAAGTTCATGCCCACAAGT 59.696 36.000 0.00 0.00 33.41 3.16
616 617 5.782047 TGAATAAAAGTTCATGCCCACAAG 58.218 37.500 0.00 0.00 33.41 3.16
617 618 5.798125 TGAATAAAAGTTCATGCCCACAA 57.202 34.783 0.00 0.00 33.41 3.33
618 619 5.479724 TGATGAATAAAAGTTCATGCCCACA 59.520 36.000 6.84 0.00 46.02 4.17
619 620 5.964758 TGATGAATAAAAGTTCATGCCCAC 58.035 37.500 6.84 0.00 46.02 4.61
620 621 6.211184 AGTTGATGAATAAAAGTTCATGCCCA 59.789 34.615 6.84 0.00 46.02 5.36
621 622 6.633856 AGTTGATGAATAAAAGTTCATGCCC 58.366 36.000 6.84 0.00 46.02 5.36
622 623 7.599998 ACAAGTTGATGAATAAAAGTTCATGCC 59.400 33.333 10.54 0.00 46.02 4.40
623 624 8.524870 ACAAGTTGATGAATAAAAGTTCATGC 57.475 30.769 10.54 1.12 46.02 4.06
626 627 9.868277 ACAAACAAGTTGATGAATAAAAGTTCA 57.132 25.926 10.54 0.00 39.87 3.18
628 629 9.651913 ACACAAACAAGTTGATGAATAAAAGTT 57.348 25.926 10.54 0.00 39.87 2.66
629 630 9.301153 GACACAAACAAGTTGATGAATAAAAGT 57.699 29.630 10.54 2.44 39.87 2.66
630 631 9.299963 TGACACAAACAAGTTGATGAATAAAAG 57.700 29.630 10.54 0.00 39.87 2.27
631 632 9.645059 TTGACACAAACAAGTTGATGAATAAAA 57.355 25.926 10.54 1.09 39.87 1.52
632 633 9.645059 TTTGACACAAACAAGTTGATGAATAAA 57.355 25.926 10.54 7.49 39.87 1.40
633 634 9.645059 TTTTGACACAAACAAGTTGATGAATAA 57.355 25.926 10.54 2.64 39.87 1.40
634 635 9.814899 ATTTTGACACAAACAAGTTGATGAATA 57.185 25.926 10.54 0.00 39.87 1.75
635 636 8.721019 ATTTTGACACAAACAAGTTGATGAAT 57.279 26.923 10.54 2.53 39.87 2.57
636 637 8.545229 AATTTTGACACAAACAAGTTGATGAA 57.455 26.923 10.54 0.00 39.87 2.57
637 638 8.545229 AAATTTTGACACAAACAAGTTGATGA 57.455 26.923 10.54 0.00 39.87 2.92
638 639 9.687717 GTAAATTTTGACACAAACAAGTTGATG 57.312 29.630 10.54 10.51 39.87 3.07
639 640 9.429359 TGTAAATTTTGACACAAACAAGTTGAT 57.571 25.926 10.54 0.00 39.87 2.57
640 641 8.818141 TGTAAATTTTGACACAAACAAGTTGA 57.182 26.923 10.54 0.00 39.87 3.18
641 642 9.475505 CATGTAAATTTTGACACAAACAAGTTG 57.524 29.630 0.00 0.00 43.43 3.16
642 643 9.213799 ACATGTAAATTTTGACACAAACAAGTT 57.786 25.926 0.00 0.00 0.00 2.66
643 644 8.770438 ACATGTAAATTTTGACACAAACAAGT 57.230 26.923 0.00 0.00 0.00 3.16
644 645 9.687717 GAACATGTAAATTTTGACACAAACAAG 57.312 29.630 0.00 0.00 0.00 3.16
645 646 9.208022 TGAACATGTAAATTTTGACACAAACAA 57.792 25.926 0.00 0.00 0.00 2.83
646 647 8.763049 TGAACATGTAAATTTTGACACAAACA 57.237 26.923 0.00 0.00 0.00 2.83
663 664 9.218440 GGATATTTTGGACAAAAATGAACATGT 57.782 29.630 13.48 0.00 45.89 3.21
664 665 9.217278 TGGATATTTTGGACAAAAATGAACATG 57.783 29.630 13.48 0.00 45.89 3.21
665 666 9.962809 ATGGATATTTTGGACAAAAATGAACAT 57.037 25.926 13.48 11.29 45.89 2.71
678 679 9.656040 GCATTTTGCATATATGGATATTTTGGA 57.344 29.630 14.51 0.00 44.26 3.53
696 697 3.683587 GACTCGCCGGGCATTTTGC 62.684 63.158 20.71 0.00 44.08 3.68
697 698 2.485122 GACTCGCCGGGCATTTTG 59.515 61.111 20.71 1.74 0.00 2.44
698 699 3.124921 CGACTCGCCGGGCATTTT 61.125 61.111 20.71 0.00 0.00 1.82
699 700 4.388499 ACGACTCGCCGGGCATTT 62.388 61.111 20.71 0.74 0.00 2.32
710 711 1.683790 AAATACAGCGCGCACGACTC 61.684 55.000 35.10 0.72 43.93 3.36
711 712 1.289109 AAAATACAGCGCGCACGACT 61.289 50.000 35.10 9.38 43.93 4.18
712 713 0.452122 AAAAATACAGCGCGCACGAC 60.452 50.000 35.10 2.51 43.93 4.34
713 714 0.451957 CAAAAATACAGCGCGCACGA 60.452 50.000 35.10 17.86 43.93 4.35
714 715 1.972801 CAAAAATACAGCGCGCACG 59.027 52.632 35.10 25.71 44.07 5.34
715 716 1.696083 GCAAAAATACAGCGCGCAC 59.304 52.632 35.10 4.34 0.00 5.34
716 717 1.795569 CGCAAAAATACAGCGCGCA 60.796 52.632 35.10 13.97 45.14 6.09
717 718 2.979036 CGCAAAAATACAGCGCGC 59.021 55.556 26.66 26.66 45.14 6.86
721 722 1.135575 AGCAGAGCGCAAAAATACAGC 60.136 47.619 11.47 0.00 46.13 4.40
722 723 2.512885 CAGCAGAGCGCAAAAATACAG 58.487 47.619 11.47 0.00 46.13 2.74
723 724 1.199789 CCAGCAGAGCGCAAAAATACA 59.800 47.619 11.47 0.00 46.13 2.29
724 725 1.468520 TCCAGCAGAGCGCAAAAATAC 59.531 47.619 11.47 0.00 46.13 1.89
725 726 1.819928 TCCAGCAGAGCGCAAAAATA 58.180 45.000 11.47 0.00 46.13 1.40
726 727 0.961019 TTCCAGCAGAGCGCAAAAAT 59.039 45.000 11.47 0.00 46.13 1.82
727 728 0.030638 GTTCCAGCAGAGCGCAAAAA 59.969 50.000 11.47 0.00 46.13 1.94
728 729 1.100463 TGTTCCAGCAGAGCGCAAAA 61.100 50.000 11.47 0.00 46.13 2.44
729 730 1.509644 CTGTTCCAGCAGAGCGCAAA 61.510 55.000 11.47 0.00 46.13 3.68
730 731 1.962822 CTGTTCCAGCAGAGCGCAA 60.963 57.895 11.47 0.00 46.13 4.85
731 732 2.357881 CTGTTCCAGCAGAGCGCA 60.358 61.111 11.47 0.00 46.13 6.09
740 741 4.374702 GTGCGCGTGCTGTTCCAG 62.375 66.667 23.16 0.00 43.34 3.86
754 755 2.352686 CGCCATAATGCAGCGTGC 60.353 61.111 8.94 3.44 44.65 5.34
758 759 4.988486 GCCGCGCCATAATGCAGC 62.988 66.667 0.00 0.00 0.00 5.25
759 760 1.960763 TAGCCGCGCCATAATGCAG 60.961 57.895 0.00 0.00 0.00 4.41
760 761 2.110006 TAGCCGCGCCATAATGCA 59.890 55.556 0.00 0.00 0.00 3.96
761 762 1.961277 AGTAGCCGCGCCATAATGC 60.961 57.895 0.00 0.00 0.00 3.56
762 763 0.599991 TCAGTAGCCGCGCCATAATG 60.600 55.000 0.00 2.43 0.00 1.90
763 764 0.105964 TTCAGTAGCCGCGCCATAAT 59.894 50.000 0.00 0.00 0.00 1.28
764 765 0.529773 CTTCAGTAGCCGCGCCATAA 60.530 55.000 0.00 0.00 0.00 1.90
765 766 1.067416 CTTCAGTAGCCGCGCCATA 59.933 57.895 0.00 0.00 0.00 2.74
766 767 2.202932 CTTCAGTAGCCGCGCCAT 60.203 61.111 0.00 0.00 0.00 4.40
799 800 4.940593 TTGCGGCTGGTTTTGCGC 62.941 61.111 0.00 0.00 0.00 6.09
801 802 3.029735 CGTTGCGGCTGGTTTTGC 61.030 61.111 0.00 0.00 0.00 3.68
813 814 2.417553 CTTTTAGCACGCGCGTTGC 61.418 57.895 34.23 34.23 45.49 4.17
814 815 1.792057 CCTTTTAGCACGCGCGTTG 60.792 57.895 35.90 27.66 45.49 4.10
815 816 1.778027 AACCTTTTAGCACGCGCGTT 61.778 50.000 35.90 23.29 45.49 4.84
816 817 1.778027 AAACCTTTTAGCACGCGCGT 61.778 50.000 32.73 32.73 45.49 6.01
817 818 0.659123 AAAACCTTTTAGCACGCGCG 60.659 50.000 30.96 30.96 45.49 6.86
818 819 1.483316 AAAAACCTTTTAGCACGCGC 58.517 45.000 5.73 0.00 38.99 6.86
848 849 2.598632 CCAACAGCCGCGCTATAGC 61.599 63.158 15.09 15.09 36.40 2.97
849 850 0.941463 CTCCAACAGCCGCGCTATAG 60.941 60.000 5.56 0.00 36.40 1.31
850 851 1.067416 CTCCAACAGCCGCGCTATA 59.933 57.895 5.56 0.00 36.40 1.31
851 852 2.032860 ATCTCCAACAGCCGCGCTAT 62.033 55.000 5.56 0.00 36.40 2.97
852 853 2.721167 ATCTCCAACAGCCGCGCTA 61.721 57.895 5.56 0.00 36.40 4.26
853 854 4.087892 ATCTCCAACAGCCGCGCT 62.088 61.111 5.56 0.00 40.77 5.92
854 855 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
855 856 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
856 857 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
857 858 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
868 869 1.168714 GGGTGTGGTTTCAGAGCATC 58.831 55.000 0.00 0.00 38.18 3.91
869 870 0.251341 GGGGTGTGGTTTCAGAGCAT 60.251 55.000 0.00 0.00 38.18 3.79
870 871 1.150536 GGGGTGTGGTTTCAGAGCA 59.849 57.895 0.00 0.00 36.53 4.26
871 872 0.606673 GAGGGGTGTGGTTTCAGAGC 60.607 60.000 0.00 0.00 34.42 4.09
872 873 1.059913 AGAGGGGTGTGGTTTCAGAG 58.940 55.000 0.00 0.00 0.00 3.35
873 874 1.420138 GAAGAGGGGTGTGGTTTCAGA 59.580 52.381 0.00 0.00 0.00 3.27
874 875 1.878102 CGAAGAGGGGTGTGGTTTCAG 60.878 57.143 0.00 0.00 0.00 3.02
875 876 0.107831 CGAAGAGGGGTGTGGTTTCA 59.892 55.000 0.00 0.00 0.00 2.69
876 877 0.108019 ACGAAGAGGGGTGTGGTTTC 59.892 55.000 0.00 0.00 0.00 2.78
877 878 0.108019 GACGAAGAGGGGTGTGGTTT 59.892 55.000 0.00 0.00 0.00 3.27
878 879 1.752833 GACGAAGAGGGGTGTGGTT 59.247 57.895 0.00 0.00 0.00 3.67
895 896 1.891722 GAGGAAAGTAACGGGGCCGA 61.892 60.000 0.00 0.00 42.83 5.54
897 898 0.107800 GAGAGGAAAGTAACGGGGCC 60.108 60.000 0.00 0.00 0.00 5.80
898 899 0.107800 GGAGAGGAAAGTAACGGGGC 60.108 60.000 0.00 0.00 0.00 5.80
900 901 3.597255 GAAAGGAGAGGAAAGTAACGGG 58.403 50.000 0.00 0.00 0.00 5.28
901 902 3.597255 GGAAAGGAGAGGAAAGTAACGG 58.403 50.000 0.00 0.00 0.00 4.44
902 903 3.007614 TGGGAAAGGAGAGGAAAGTAACG 59.992 47.826 0.00 0.00 0.00 3.18
903 904 4.325119 GTGGGAAAGGAGAGGAAAGTAAC 58.675 47.826 0.00 0.00 0.00 2.50
904 905 3.007614 CGTGGGAAAGGAGAGGAAAGTAA 59.992 47.826 0.00 0.00 0.00 2.24
905 906 2.565834 CGTGGGAAAGGAGAGGAAAGTA 59.434 50.000 0.00 0.00 0.00 2.24
906 907 1.348036 CGTGGGAAAGGAGAGGAAAGT 59.652 52.381 0.00 0.00 0.00 2.66
907 908 1.946283 GCGTGGGAAAGGAGAGGAAAG 60.946 57.143 0.00 0.00 0.00 2.62
908 909 0.036306 GCGTGGGAAAGGAGAGGAAA 59.964 55.000 0.00 0.00 0.00 3.13
929 930 1.682344 GAGGATTGGGTTGGTGGGC 60.682 63.158 0.00 0.00 0.00 5.36
951 952 0.174162 TTAGGGTTTAGAGGACGCGC 59.826 55.000 5.73 0.00 35.38 6.86
959 960 0.174162 GCGGCGAGTTAGGGTTTAGA 59.826 55.000 12.98 0.00 0.00 2.10
983 984 3.628646 ATGGCTTCCGGCGCTTTCT 62.629 57.895 7.64 0.00 42.94 2.52
1120 1341 0.546598 ATTGGGATTGAGGGGTCGAC 59.453 55.000 7.13 7.13 0.00 4.20
1144 1365 4.174129 GCGTTTCGCGGGATTGGG 62.174 66.667 6.13 0.00 44.55 4.12
1320 1561 8.806429 TCAGAGCCAAGAACATCATTTATTTA 57.194 30.769 0.00 0.00 0.00 1.40
1321 1562 7.147949 CCTCAGAGCCAAGAACATCATTTATTT 60.148 37.037 0.00 0.00 0.00 1.40
1322 1563 6.320672 CCTCAGAGCCAAGAACATCATTTATT 59.679 38.462 0.00 0.00 0.00 1.40
1323 1564 5.826737 CCTCAGAGCCAAGAACATCATTTAT 59.173 40.000 0.00 0.00 0.00 1.40
1422 1663 1.256812 TGAGCTGGATGACGTTCTGA 58.743 50.000 0.00 0.00 0.00 3.27
1452 1693 2.832643 TAGTCGAACCTGGGGATGTA 57.167 50.000 0.00 0.00 0.00 2.29
1478 1719 5.300752 ACATGAAGTTCTTCTGATTCGTGT 58.699 37.500 12.74 9.04 43.54 4.49
1495 1736 4.832266 AGGCAGTTAACAATCCAACATGAA 59.168 37.500 8.61 0.00 0.00 2.57
1503 1744 1.130561 GACGCAGGCAGTTAACAATCC 59.869 52.381 8.61 5.60 0.00 3.01
1505 1746 1.165270 GGACGCAGGCAGTTAACAAT 58.835 50.000 8.61 0.00 0.00 2.71
1538 1779 2.288395 CCTGCAAGAATCAACCCAACAC 60.288 50.000 0.00 0.00 34.07 3.32
1540 1781 1.273327 CCCTGCAAGAATCAACCCAAC 59.727 52.381 0.00 0.00 34.07 3.77
1541 1782 1.631405 CCCTGCAAGAATCAACCCAA 58.369 50.000 0.00 0.00 34.07 4.12
1542 1783 0.899717 GCCCTGCAAGAATCAACCCA 60.900 55.000 0.00 0.00 34.07 4.51
1543 1784 1.607801 GGCCCTGCAAGAATCAACCC 61.608 60.000 0.00 0.00 34.07 4.11
1544 1785 1.893062 GGCCCTGCAAGAATCAACC 59.107 57.895 0.00 0.00 34.07 3.77
1545 1786 1.508088 CGGCCCTGCAAGAATCAAC 59.492 57.895 0.00 0.00 34.07 3.18
1841 2088 1.531149 CACTTGTAGCAACCAGTTCCG 59.469 52.381 0.00 0.00 29.45 4.30
1970 2220 3.976793 ATTCATGCAAGTTATCTGCCG 57.023 42.857 0.00 0.00 0.00 5.69
1977 2227 8.140628 ACATAACACACAAATTCATGCAAGTTA 58.859 29.630 0.00 0.00 0.00 2.24
1980 2230 7.042590 ACAACATAACACACAAATTCATGCAAG 60.043 33.333 0.00 0.00 0.00 4.01
1994 2244 4.713553 AGTCACCATCACAACATAACACA 58.286 39.130 0.00 0.00 0.00 3.72
2009 2259 5.971763 AGCATAAAAACAACAAAGTCACCA 58.028 33.333 0.00 0.00 0.00 4.17
2010 2260 7.995463 TTAGCATAAAAACAACAAAGTCACC 57.005 32.000 0.00 0.00 0.00 4.02
2227 2477 7.800092 AGAGTCAGCAAGATCCAATTACTAAT 58.200 34.615 0.00 0.00 0.00 1.73
2230 2480 5.690464 AGAGTCAGCAAGATCCAATTACT 57.310 39.130 0.00 0.00 0.00 2.24
2255 2505 4.700213 AGGTCTGAAATCATTAACCCAACG 59.300 41.667 6.29 0.00 0.00 4.10
2457 2716 9.482627 GTATATGACAGCTAATAGGGATTATGC 57.517 37.037 0.00 0.00 0.00 3.14
2492 2751 9.553064 AGATATTCCAAGTCACTTCATAATCAC 57.447 33.333 0.00 0.00 0.00 3.06
2564 2823 8.246615 ACCTTATATTTAGGAATGGAGGGAGTA 58.753 37.037 9.82 0.00 36.58 2.59
2565 2824 7.017651 CACCTTATATTTAGGAATGGAGGGAGT 59.982 40.741 9.82 0.00 36.58 3.85
2566 2825 7.017651 ACACCTTATATTTAGGAATGGAGGGAG 59.982 40.741 9.82 0.00 36.58 4.30
2567 2826 6.855061 ACACCTTATATTTAGGAATGGAGGGA 59.145 38.462 9.82 0.00 36.58 4.20
2568 2827 7.091533 ACACCTTATATTTAGGAATGGAGGG 57.908 40.000 9.82 0.00 36.58 4.30
2606 2865 8.784043 GGTCAAACATAGATAACAGTTGACTTT 58.216 33.333 11.96 0.00 0.00 2.66
2607 2866 7.936847 TGGTCAAACATAGATAACAGTTGACTT 59.063 33.333 11.96 0.00 0.00 3.01
2608 2867 7.450074 TGGTCAAACATAGATAACAGTTGACT 58.550 34.615 11.96 0.00 0.00 3.41
2609 2868 7.667043 TGGTCAAACATAGATAACAGTTGAC 57.333 36.000 0.00 0.00 0.00 3.18
2610 2869 7.936847 ACTTGGTCAAACATAGATAACAGTTGA 59.063 33.333 0.00 0.00 0.00 3.18
2611 2870 8.099364 ACTTGGTCAAACATAGATAACAGTTG 57.901 34.615 0.00 0.00 0.00 3.16
2612 2871 8.691661 AACTTGGTCAAACATAGATAACAGTT 57.308 30.769 0.00 0.00 0.00 3.16
2613 2872 8.691661 AAACTTGGTCAAACATAGATAACAGT 57.308 30.769 0.00 0.00 0.00 3.55
2615 2874 9.562408 TGTAAACTTGGTCAAACATAGATAACA 57.438 29.630 0.00 0.00 0.00 2.41
2617 2876 8.726988 GCTGTAAACTTGGTCAAACATAGATAA 58.273 33.333 0.00 0.00 0.00 1.75
2618 2877 7.880713 TGCTGTAAACTTGGTCAAACATAGATA 59.119 33.333 0.00 0.00 0.00 1.98
2619 2878 6.714810 TGCTGTAAACTTGGTCAAACATAGAT 59.285 34.615 0.00 0.00 0.00 1.98
2620 2879 6.058833 TGCTGTAAACTTGGTCAAACATAGA 58.941 36.000 0.00 0.00 0.00 1.98
2621 2880 6.312399 TGCTGTAAACTTGGTCAAACATAG 57.688 37.500 0.00 0.00 0.00 2.23
2622 2881 6.701145 TTGCTGTAAACTTGGTCAAACATA 57.299 33.333 0.00 0.00 0.00 2.29
2623 2882 5.590530 TTGCTGTAAACTTGGTCAAACAT 57.409 34.783 0.00 0.00 0.00 2.71
2624 2883 5.392767 TTTGCTGTAAACTTGGTCAAACA 57.607 34.783 0.00 0.00 0.00 2.83
2625 2884 6.902224 ATTTTGCTGTAAACTTGGTCAAAC 57.098 33.333 0.00 0.00 0.00 2.93
2627 2886 9.853555 CATATATTTTGCTGTAAACTTGGTCAA 57.146 29.630 0.00 0.00 0.00 3.18
2628 2887 9.237187 TCATATATTTTGCTGTAAACTTGGTCA 57.763 29.630 0.00 0.00 0.00 4.02
2744 3003 9.616156 TGTAAGTTTGACCAAGTTTATAGACAA 57.384 29.630 0.00 0.00 30.16 3.18
2745 3004 9.268268 CTGTAAGTTTGACCAAGTTTATAGACA 57.732 33.333 0.00 0.00 30.16 3.41
2746 3005 9.485206 TCTGTAAGTTTGACCAAGTTTATAGAC 57.515 33.333 0.00 0.00 33.76 2.59
2749 3008 9.841295 ACTTCTGTAAGTTTGACCAAGTTTATA 57.159 29.630 0.00 0.00 43.60 0.98
2750 3009 8.747538 ACTTCTGTAAGTTTGACCAAGTTTAT 57.252 30.769 0.00 0.00 43.60 1.40
2794 3053 8.386264 CCTCCATTCCTCAATATAAGGTGTATT 58.614 37.037 4.45 0.00 35.29 1.89
2795 3054 7.037297 CCCTCCATTCCTCAATATAAGGTGTAT 60.037 40.741 4.45 0.00 35.29 2.29
2796 3055 6.272324 CCCTCCATTCCTCAATATAAGGTGTA 59.728 42.308 4.45 0.00 35.29 2.90
2797 3056 5.073691 CCCTCCATTCCTCAATATAAGGTGT 59.926 44.000 4.45 0.00 35.29 4.16
2798 3057 5.310594 TCCCTCCATTCCTCAATATAAGGTG 59.689 44.000 4.45 0.00 35.29 4.00
2799 3058 5.486332 TCCCTCCATTCCTCAATATAAGGT 58.514 41.667 4.45 0.00 35.29 3.50
2800 3059 5.549619 ACTCCCTCCATTCCTCAATATAAGG 59.450 44.000 0.00 0.00 35.05 2.69
2801 3060 6.694445 ACTCCCTCCATTCCTCAATATAAG 57.306 41.667 0.00 0.00 0.00 1.73
2802 3061 7.313731 AGTACTCCCTCCATTCCTCAATATAA 58.686 38.462 0.00 0.00 0.00 0.98
2803 3062 6.875469 AGTACTCCCTCCATTCCTCAATATA 58.125 40.000 0.00 0.00 0.00 0.86
2804 3063 5.731924 AGTACTCCCTCCATTCCTCAATAT 58.268 41.667 0.00 0.00 0.00 1.28
2805 3064 5.157770 AGTACTCCCTCCATTCCTCAATA 57.842 43.478 0.00 0.00 0.00 1.90
2806 3065 4.014273 AGTACTCCCTCCATTCCTCAAT 57.986 45.455 0.00 0.00 0.00 2.57
2807 3066 3.491766 AGTACTCCCTCCATTCCTCAA 57.508 47.619 0.00 0.00 0.00 3.02
2808 3067 3.491766 AAGTACTCCCTCCATTCCTCA 57.508 47.619 0.00 0.00 0.00 3.86
2809 3068 7.455008 TGATAATAAGTACTCCCTCCATTCCTC 59.545 40.741 0.00 0.00 0.00 3.71
2810 3069 7.313731 TGATAATAAGTACTCCCTCCATTCCT 58.686 38.462 0.00 0.00 0.00 3.36
2811 3070 7.554959 TGATAATAAGTACTCCCTCCATTCC 57.445 40.000 0.00 0.00 0.00 3.01
2813 3072 9.799106 CAATTGATAATAAGTACTCCCTCCATT 57.201 33.333 0.00 0.00 0.00 3.16
2814 3073 9.170890 TCAATTGATAATAAGTACTCCCTCCAT 57.829 33.333 3.38 0.00 0.00 3.41
2815 3074 8.561536 TCAATTGATAATAAGTACTCCCTCCA 57.438 34.615 3.38 0.00 0.00 3.86
3020 3280 4.528206 TGCCGTCAGATAGATGTGGATAAT 59.472 41.667 0.00 0.00 0.00 1.28
3028 3288 0.855349 GCGTTGCCGTCAGATAGATG 59.145 55.000 0.00 0.00 36.15 2.90
3045 3305 7.113124 CGAGTAGTACAAAAATAGTAGGATGCG 59.887 40.741 2.52 0.00 0.00 4.73
3070 3520 8.184192 GCTTCAAATTATGACATATATTCCCCG 58.816 37.037 0.00 0.00 37.92 5.73
3087 3537 5.653769 TGCCTAAATGCTCTAGCTTCAAATT 59.346 36.000 3.26 0.00 42.66 1.82
3105 3555 4.398044 GGCTGCTAGTTAATGTTTGCCTAA 59.602 41.667 0.00 0.00 35.44 2.69
3117 3567 4.250464 GTGTTACACATGGCTGCTAGTTA 58.750 43.478 10.96 0.00 34.08 2.24
3286 3780 5.180868 GCTTCACATGGCTAGATATTTCCTG 59.819 44.000 0.00 0.00 0.00 3.86
3445 3940 6.544650 TCCCTGCTGTAACCAAGTTTAAATA 58.455 36.000 0.00 0.00 0.00 1.40
3533 4028 4.941873 ACATTCCCTAACTTCCGAAACATC 59.058 41.667 0.00 0.00 0.00 3.06
3540 4035 4.833390 AGAGAAACATTCCCTAACTTCCG 58.167 43.478 0.00 0.00 0.00 4.30
3651 4146 9.084533 ACAGGGAGCAACTTTATTTTTATAACA 57.915 29.630 0.00 0.00 0.00 2.41
3664 4159 0.615850 GGCTAGACAGGGAGCAACTT 59.384 55.000 0.00 0.00 40.64 2.66
3774 4279 2.286067 GCAGATTACTCACGATTGCAGC 60.286 50.000 0.00 0.00 0.00 5.25
3784 4289 3.701664 TCAGAGACAGGCAGATTACTCA 58.298 45.455 0.00 0.00 0.00 3.41
3812 4317 0.819259 GTCAGTTGGTCTGGCTGCAA 60.819 55.000 0.50 0.00 44.52 4.08
3986 4498 6.710295 TGAGCAAGCTTCAAGTACAAAAGATA 59.290 34.615 0.00 0.00 0.00 1.98
4132 4644 9.357652 CAAAGCATATAAATGTAAGCAAACACT 57.642 29.630 0.00 0.00 35.38 3.55
4168 4682 2.887738 AAAGCCAGGCCCACAAACCA 62.888 55.000 8.22 0.00 0.00 3.67
4169 4683 1.695114 AAAAGCCAGGCCCACAAACC 61.695 55.000 8.22 0.00 0.00 3.27
4177 4691 1.260544 ATGAACAGAAAAGCCAGGCC 58.739 50.000 8.22 0.00 0.00 5.19
4189 4703 6.176975 TGGCAGTTACGAAAATATGAACAG 57.823 37.500 0.00 0.00 0.00 3.16
4424 4941 7.010091 CAGTAAACACAAAAGGAAAATGGACAC 59.990 37.037 0.00 0.00 0.00 3.67
4472 4989 5.268118 TCGTCTGATATTCATGTGAAGCT 57.732 39.130 1.65 0.00 37.48 3.74
4493 5010 3.846383 GCTGCTGTTGACGTCTTTTCTTC 60.846 47.826 17.92 0.92 0.00 2.87
4665 5182 2.576615 GGGCTTTCCATAGTGATGACC 58.423 52.381 0.00 0.00 34.73 4.02
4666 5183 2.576615 GGGGCTTTCCATAGTGATGAC 58.423 52.381 0.00 0.00 34.73 3.06
5038 5561 0.630673 TCCTACATGCCATGGCCTTT 59.369 50.000 33.44 19.52 41.09 3.11
5063 5586 5.822519 GTGCATAGGTTTCCACTTATCATGA 59.177 40.000 0.00 0.00 0.00 3.07
5162 5686 8.465273 AACTTCCCAAGTAATTAATCCATAGC 57.535 34.615 0.00 0.00 41.91 2.97
5195 5721 4.744570 TGATCAAACTTACTAGCAGGACG 58.255 43.478 0.00 0.00 0.00 4.79
5239 5772 6.098266 ACTGATATGGTGTACAGATGTTGCTA 59.902 38.462 0.00 0.00 29.51 3.49
5280 5814 9.734620 GCATCTACAGCAACAAATATGAAAATA 57.265 29.630 0.00 0.00 0.00 1.40
5281 5815 8.472413 AGCATCTACAGCAACAAATATGAAAAT 58.528 29.630 0.00 0.00 0.00 1.82
5282 5816 7.829725 AGCATCTACAGCAACAAATATGAAAA 58.170 30.769 0.00 0.00 0.00 2.29
5283 5817 7.395190 AGCATCTACAGCAACAAATATGAAA 57.605 32.000 0.00 0.00 0.00 2.69
5284 5818 7.770433 AGTAGCATCTACAGCAACAAATATGAA 59.230 33.333 6.74 0.00 0.00 2.57
5285 5819 7.275183 AGTAGCATCTACAGCAACAAATATGA 58.725 34.615 6.74 0.00 0.00 2.15
5286 5820 7.307632 GGAGTAGCATCTACAGCAACAAATATG 60.308 40.741 6.74 0.00 0.00 1.78
5306 5840 2.358267 GTGTATGTGACGGAGGGAGTAG 59.642 54.545 0.00 0.00 0.00 2.57
5309 5843 1.135139 CAGTGTATGTGACGGAGGGAG 59.865 57.143 0.00 0.00 0.00 4.30
5310 5844 1.182667 CAGTGTATGTGACGGAGGGA 58.817 55.000 0.00 0.00 0.00 4.20
5311 5845 0.175760 CCAGTGTATGTGACGGAGGG 59.824 60.000 0.00 0.00 0.00 4.30
5312 5846 0.895530 ACCAGTGTATGTGACGGAGG 59.104 55.000 0.00 0.00 0.00 4.30
5313 5847 1.272490 ACACCAGTGTATGTGACGGAG 59.728 52.381 0.54 0.00 42.90 4.63
5314 5848 1.334160 ACACCAGTGTATGTGACGGA 58.666 50.000 0.54 0.00 42.90 4.69
5315 5849 3.306917 TTACACCAGTGTATGTGACGG 57.693 47.619 11.24 0.00 44.54 4.79
5316 5850 5.660629 TTTTTACACCAGTGTATGTGACG 57.339 39.130 11.24 0.00 44.54 4.35
5335 5869 7.255139 GCTGTCCCATAATATAAGAGCGTTTTT 60.255 37.037 0.00 0.00 0.00 1.94
5336 5870 6.204882 GCTGTCCCATAATATAAGAGCGTTTT 59.795 38.462 0.00 0.00 0.00 2.43
5337 5871 5.701290 GCTGTCCCATAATATAAGAGCGTTT 59.299 40.000 0.00 0.00 0.00 3.60
5338 5872 5.238583 GCTGTCCCATAATATAAGAGCGTT 58.761 41.667 0.00 0.00 0.00 4.84
5339 5873 4.618460 CGCTGTCCCATAATATAAGAGCGT 60.618 45.833 0.00 0.00 41.31 5.07
5340 5874 3.859961 CGCTGTCCCATAATATAAGAGCG 59.140 47.826 0.00 0.00 40.55 5.03
5341 5875 4.184629 CCGCTGTCCCATAATATAAGAGC 58.815 47.826 0.00 0.00 0.00 4.09
5342 5876 4.466370 TCCCGCTGTCCCATAATATAAGAG 59.534 45.833 0.00 0.00 0.00 2.85
5343 5877 4.422057 TCCCGCTGTCCCATAATATAAGA 58.578 43.478 0.00 0.00 0.00 2.10
5344 5878 4.819105 TCCCGCTGTCCCATAATATAAG 57.181 45.455 0.00 0.00 0.00 1.73
5345 5879 5.772393 ATTCCCGCTGTCCCATAATATAA 57.228 39.130 0.00 0.00 0.00 0.98
5346 5880 6.199376 TCTATTCCCGCTGTCCCATAATATA 58.801 40.000 0.00 0.00 0.00 0.86
5347 5881 5.030147 TCTATTCCCGCTGTCCCATAATAT 58.970 41.667 0.00 0.00 0.00 1.28
5348 5882 4.422057 TCTATTCCCGCTGTCCCATAATA 58.578 43.478 0.00 0.00 0.00 0.98
5349 5883 3.248024 TCTATTCCCGCTGTCCCATAAT 58.752 45.455 0.00 0.00 0.00 1.28
5350 5884 2.684943 TCTATTCCCGCTGTCCCATAA 58.315 47.619 0.00 0.00 0.00 1.90
5351 5885 2.391926 TCTATTCCCGCTGTCCCATA 57.608 50.000 0.00 0.00 0.00 2.74
5352 5886 1.507140 TTCTATTCCCGCTGTCCCAT 58.493 50.000 0.00 0.00 0.00 4.00
5353 5887 1.507140 ATTCTATTCCCGCTGTCCCA 58.493 50.000 0.00 0.00 0.00 4.37
5354 5888 2.640316 AATTCTATTCCCGCTGTCCC 57.360 50.000 0.00 0.00 0.00 4.46
5355 5889 4.983671 AAAAATTCTATTCCCGCTGTCC 57.016 40.909 0.00 0.00 0.00 4.02
5408 5947 9.565213 CACATTCTCTCCATTTCAAATTAACTC 57.435 33.333 0.00 0.00 0.00 3.01
5410 5949 8.031277 AGCACATTCTCTCCATTTCAAATTAAC 58.969 33.333 0.00 0.00 0.00 2.01
5434 5973 9.929180 AAGATTTTAACTCCTAAAAATTCCAGC 57.071 29.630 0.00 0.00 41.64 4.85
5472 6033 8.573035 TCCTGGAATTCAAACTTGTGTATAAAC 58.427 33.333 7.93 0.00 0.00 2.01
5484 6045 7.176690 TCAACCTAGAAATCCTGGAATTCAAAC 59.823 37.037 22.87 0.75 0.00 2.93
5514 6075 1.002792 GCAAACCTGAACCTCGACAAC 60.003 52.381 0.00 0.00 0.00 3.32
5748 6309 2.185350 CGTCAAGAGCCGGCAGAT 59.815 61.111 31.54 8.11 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.