Multiple sequence alignment - TraesCS1B01G254000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G254000 chr1B 100.000 5716 0 0 1 5716 448243392 448249107 0.000000e+00 10556.0
1 TraesCS1B01G254000 chr1B 92.246 374 11 10 1 356 448235245 448235618 1.100000e-141 514.0
2 TraesCS1B01G254000 chr1B 88.764 89 7 3 4213 4299 509149775 509149862 7.830000e-19 106.0
3 TraesCS1B01G254000 chr1A 94.213 2402 103 22 1040 3413 430592953 430595346 0.000000e+00 3633.0
4 TraesCS1B01G254000 chr1A 94.876 1288 55 8 3973 5258 430599731 430601009 0.000000e+00 2002.0
5 TraesCS1B01G254000 chr1A 92.814 334 20 3 5385 5716 430601499 430601830 1.110000e-131 481.0
6 TraesCS1B01G254000 chr1A 86.824 425 20 14 551 961 430592255 430592657 5.260000e-120 442.0
7 TraesCS1B01G254000 chr1A 94.393 214 11 1 3573 3785 430595343 430595556 1.540000e-85 327.0
8 TraesCS1B01G254000 chr1A 84.091 132 8 3 5274 5393 430600994 430601124 1.300000e-21 115.0
9 TraesCS1B01G254000 chr1D 94.479 1793 65 14 1633 3413 332933230 332935000 0.000000e+00 2732.0
10 TraesCS1B01G254000 chr1D 93.253 1571 59 24 3573 5136 332934997 332936527 0.000000e+00 2270.0
11 TraesCS1B01G254000 chr1D 93.520 1034 30 15 644 1643 332932176 332933206 0.000000e+00 1504.0
12 TraesCS1B01G254000 chr1D 93.119 218 12 3 5500 5716 332944240 332944455 3.320000e-82 316.0
13 TraesCS1B01G254000 chr1D 86.831 243 30 2 244 485 354464666 354464425 2.620000e-68 270.0
14 TraesCS1B01G254000 chr1D 82.397 267 37 9 253 512 490935214 490934951 2.070000e-54 224.0
15 TraesCS1B01G254000 chr1D 83.459 133 8 4 5279 5399 332941844 332941974 1.680000e-20 111.0
16 TraesCS1B01G254000 chr1D 94.203 69 2 1 5404 5470 332944184 332944252 2.820000e-18 104.0
17 TraesCS1B01G254000 chr2D 85.612 278 36 4 241 514 505730702 505730979 7.250000e-74 289.0
18 TraesCS1B01G254000 chr2D 92.350 183 14 0 3404 3586 632423756 632423574 1.580000e-65 261.0
19 TraesCS1B01G254000 chr2D 87.273 220 26 2 1 218 505538052 505538271 3.420000e-62 250.0
20 TraesCS1B01G254000 chr4D 85.305 279 36 4 241 514 478728033 478728311 3.370000e-72 283.0
21 TraesCS1B01G254000 chr6D 95.376 173 8 0 3404 3576 260024682 260024510 5.640000e-70 276.0
22 TraesCS1B01G254000 chr6A 95.376 173 8 0 3404 3576 370675432 370675604 5.640000e-70 276.0
23 TraesCS1B01G254000 chr6A 93.785 177 9 2 3405 3580 268019182 268019357 1.220000e-66 265.0
24 TraesCS1B01G254000 chr7D 88.261 230 25 1 1 228 78759817 78760046 2.030000e-69 274.0
25 TraesCS1B01G254000 chr5A 94.253 174 8 2 3404 3576 44602745 44602573 1.220000e-66 265.0
26 TraesCS1B01G254000 chr5A 85.903 227 31 1 1 227 691659141 691659366 2.060000e-59 241.0
27 TraesCS1B01G254000 chr5A 90.698 86 8 0 4217 4302 383880467 383880552 1.300000e-21 115.0
28 TraesCS1B01G254000 chr5D 89.151 212 20 3 13 221 480342022 480342233 1.580000e-65 261.0
29 TraesCS1B01G254000 chr5D 91.489 188 13 2 3409 3594 487985937 487986123 7.350000e-64 255.0
30 TraesCS1B01G254000 chr2B 87.281 228 28 1 1 228 161991461 161991687 5.680000e-65 259.0
31 TraesCS1B01G254000 chr2B 84.677 248 36 2 241 486 592758600 592758847 4.420000e-61 246.0
32 TraesCS1B01G254000 chr2B 82.374 278 43 4 241 514 161991891 161992166 2.660000e-58 237.0
33 TraesCS1B01G254000 chr2B 85.526 228 32 1 1 228 676079598 676079824 2.660000e-58 237.0
34 TraesCS1B01G254000 chr2B 83.333 246 39 2 241 484 484639631 484639876 5.760000e-55 226.0
35 TraesCS1B01G254000 chr7B 86.957 230 28 2 1 228 573104815 573105044 2.040000e-64 257.0
36 TraesCS1B01G254000 chr7B 84.188 234 36 1 241 473 736025827 736026060 5.760000e-55 226.0
37 TraesCS1B01G254000 chr6B 91.444 187 15 1 3411 3597 95349576 95349391 7.350000e-64 255.0
38 TraesCS1B01G254000 chr6B 91.146 192 12 5 3392 3579 715114298 715114108 7.350000e-64 255.0
39 TraesCS1B01G254000 chr3A 91.099 191 13 4 3407 3597 642616618 642616804 7.350000e-64 255.0
40 TraesCS1B01G254000 chr3A 90.909 88 7 1 4216 4302 700747710 700747623 3.620000e-22 117.0
41 TraesCS1B01G254000 chr3A 87.209 86 10 1 4216 4300 646737258 646737343 4.710000e-16 97.1
42 TraesCS1B01G254000 chr4A 86.977 215 25 3 4 217 584200056 584199844 7.400000e-59 239.0
43 TraesCS1B01G254000 chr3B 89.655 87 8 1 4215 4300 126580064 126580150 6.060000e-20 110.0
44 TraesCS1B01G254000 chr3B 89.412 85 8 1 4216 4299 241680425 241680509 7.830000e-19 106.0
45 TraesCS1B01G254000 chr3D 88.235 85 9 1 4214 4297 516880464 516880548 3.640000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G254000 chr1B 448243392 448249107 5715 False 10556.000000 10556 100.000000 1 5716 1 chr1B.!!$F2 5715
1 TraesCS1B01G254000 chr1A 430592255 430595556 3301 False 1467.333333 3633 91.810000 551 3785 3 chr1A.!!$F1 3234
2 TraesCS1B01G254000 chr1A 430599731 430601830 2099 False 866.000000 2002 90.593667 3973 5716 3 chr1A.!!$F2 1743
3 TraesCS1B01G254000 chr1D 332932176 332936527 4351 False 2168.666667 2732 93.750667 644 5136 3 chr1D.!!$F1 4492
4 TraesCS1B01G254000 chr2B 161991461 161992166 705 False 248.000000 259 84.827500 1 514 2 chr2B.!!$F4 513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
311 340 0.105224 CGTGTGTGGTAAGGTCACCA 59.895 55.000 0.00 0.00 46.46 4.17 F
595 624 0.109342 ACTCTGCCAGAAACCCACAG 59.891 55.000 0.00 0.00 0.00 3.66 F
601 630 0.178992 CCAGAAACCCACAGCTCCAA 60.179 55.000 0.00 0.00 0.00 3.53 F
628 657 0.741915 GAGAGCCTACGTAGCTTGCT 59.258 55.000 20.38 20.38 41.75 3.91 F
1257 1535 0.749454 ATTACGAGGACGGCTACGGT 60.749 55.000 11.54 0.00 46.48 4.83 F
1980 2307 0.948678 GCAAACTCCGTTGGCTGTTA 59.051 50.000 0.00 0.00 39.21 2.41 F
1981 2308 1.334689 GCAAACTCCGTTGGCTGTTAC 60.335 52.381 0.00 0.00 39.21 2.50 F
3134 3473 1.600916 GGGAAAGTCAAGGCAGCGT 60.601 57.895 0.00 0.00 0.00 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1239 1517 1.377202 ACCGTAGCCGTCCTCGTAA 60.377 57.895 0.00 0.0 35.01 3.18 R
1412 1697 1.687494 GACCTCGTCTGCACGCATTC 61.687 60.000 0.00 0.0 46.28 2.67 R
1673 1994 2.275380 GGGCAAATTGACCTGCGGT 61.275 57.895 11.34 0.0 44.12 5.68 R
1837 2162 2.280183 CGTGCTCTAAACTCGATCAAGC 59.720 50.000 0.00 0.0 0.00 4.01 R
3159 3498 0.682532 TCACTGCCACAAACTGCCAA 60.683 50.000 0.00 0.0 0.00 4.52 R
3409 3749 2.715763 TTGGGAACAGAGGGAGTACT 57.284 50.000 0.00 0.0 44.54 2.73 R
3561 3901 3.036819 ACCTATTTACTCCCTCCGTTCC 58.963 50.000 0.00 0.0 0.00 3.62 R
4911 5257 0.876399 AAACGACCAACAATACCGCC 59.124 50.000 0.00 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.446031 GCTTGCTCTTATTTGTTGCATTC 57.554 39.130 0.00 0.00 33.50 2.67
25 26 4.487948 TGCTCTTATTTGTTGCATTCTGC 58.512 39.130 0.00 0.00 45.29 4.26
65 66 1.317613 GGTTGTGATGAACTGGTGCA 58.682 50.000 0.00 0.00 0.00 4.57
73 74 2.787473 TGAACTGGTGCATAAGGAGG 57.213 50.000 0.00 0.00 0.00 4.30
76 77 3.274288 GAACTGGTGCATAAGGAGGAAG 58.726 50.000 0.00 0.00 0.00 3.46
86 87 0.250513 AAGGAGGAAGATGTGACGCC 59.749 55.000 0.00 0.00 0.00 5.68
107 108 1.069978 TGACGATGTTGTCAGCTCCAA 59.930 47.619 0.00 0.00 43.62 3.53
108 109 1.461127 GACGATGTTGTCAGCTCCAAC 59.539 52.381 15.67 15.67 41.97 3.77
141 142 1.266718 GCATTTGACAACGAAGCCTGA 59.733 47.619 0.00 0.00 0.00 3.86
152 153 4.918810 ACGAAGCCTGAAAGAACAAAAT 57.081 36.364 0.00 0.00 34.07 1.82
153 154 4.610945 ACGAAGCCTGAAAGAACAAAATG 58.389 39.130 0.00 0.00 34.07 2.32
156 157 6.206634 ACGAAGCCTGAAAGAACAAAATGATA 59.793 34.615 0.00 0.00 34.07 2.15
168 169 4.406456 ACAAAATGATAGAGTGGGCACAA 58.594 39.130 0.00 0.00 0.00 3.33
174 175 3.199727 TGATAGAGTGGGCACAAGCAATA 59.800 43.478 0.00 0.00 44.61 1.90
183 184 3.005791 GGGCACAAGCAATATGGGATAAC 59.994 47.826 0.00 0.00 44.61 1.89
187 188 5.278169 GCACAAGCAATATGGGATAACAGAG 60.278 44.000 0.00 0.00 41.58 3.35
188 189 6.057533 CACAAGCAATATGGGATAACAGAGA 58.942 40.000 0.00 0.00 0.00 3.10
191 192 6.692849 AGCAATATGGGATAACAGAGATCA 57.307 37.500 0.00 0.00 0.00 2.92
192 193 7.268212 AGCAATATGGGATAACAGAGATCAT 57.732 36.000 0.00 0.00 0.00 2.45
194 195 9.000978 AGCAATATGGGATAACAGAGATCATAT 57.999 33.333 0.00 0.00 0.00 1.78
229 258 0.679321 GAAGAAGAGCAAGGGCAGGG 60.679 60.000 0.00 0.00 44.61 4.45
230 259 1.430369 AAGAAGAGCAAGGGCAGGGT 61.430 55.000 0.00 0.00 44.61 4.34
231 260 1.676967 GAAGAGCAAGGGCAGGGTG 60.677 63.158 0.00 0.00 44.61 4.61
233 262 2.360475 GAGCAAGGGCAGGGTGAC 60.360 66.667 0.00 0.00 44.61 3.67
235 264 2.203480 GCAAGGGCAGGGTGACAA 60.203 61.111 0.00 0.00 40.72 3.18
236 265 2.564721 GCAAGGGCAGGGTGACAAC 61.565 63.158 0.00 0.00 40.72 3.32
242 271 1.518903 GGCAGGGTGACAACAAGAGC 61.519 60.000 0.00 0.00 0.00 4.09
243 272 0.536006 GCAGGGTGACAACAAGAGCT 60.536 55.000 0.00 0.00 0.00 4.09
244 273 1.270839 GCAGGGTGACAACAAGAGCTA 60.271 52.381 0.00 0.00 0.00 3.32
245 274 2.693069 CAGGGTGACAACAAGAGCTAG 58.307 52.381 0.00 0.00 0.00 3.42
246 275 2.300152 CAGGGTGACAACAAGAGCTAGA 59.700 50.000 0.00 0.00 0.00 2.43
247 276 2.972713 AGGGTGACAACAAGAGCTAGAA 59.027 45.455 0.00 0.00 0.00 2.10
248 277 3.584848 AGGGTGACAACAAGAGCTAGAAT 59.415 43.478 0.00 0.00 0.00 2.40
249 278 4.777896 AGGGTGACAACAAGAGCTAGAATA 59.222 41.667 0.00 0.00 0.00 1.75
250 279 5.248477 AGGGTGACAACAAGAGCTAGAATAA 59.752 40.000 0.00 0.00 0.00 1.40
251 280 5.938125 GGGTGACAACAAGAGCTAGAATAAA 59.062 40.000 0.00 0.00 0.00 1.40
252 281 6.128254 GGGTGACAACAAGAGCTAGAATAAAC 60.128 42.308 0.00 0.00 0.00 2.01
253 282 6.128254 GGTGACAACAAGAGCTAGAATAAACC 60.128 42.308 0.00 0.00 0.00 3.27
254 283 5.637810 TGACAACAAGAGCTAGAATAAACCG 59.362 40.000 0.00 0.00 0.00 4.44
255 284 5.548406 ACAACAAGAGCTAGAATAAACCGT 58.452 37.500 0.00 0.00 0.00 4.83
256 285 6.694447 ACAACAAGAGCTAGAATAAACCGTA 58.306 36.000 0.00 0.00 0.00 4.02
257 286 7.156673 ACAACAAGAGCTAGAATAAACCGTAA 58.843 34.615 0.00 0.00 0.00 3.18
258 287 7.822822 ACAACAAGAGCTAGAATAAACCGTAAT 59.177 33.333 0.00 0.00 0.00 1.89
259 288 8.665685 CAACAAGAGCTAGAATAAACCGTAATT 58.334 33.333 0.00 0.00 0.00 1.40
260 289 8.788325 ACAAGAGCTAGAATAAACCGTAATTT 57.212 30.769 0.00 0.00 0.00 1.82
261 290 8.665685 ACAAGAGCTAGAATAAACCGTAATTTG 58.334 33.333 0.00 0.00 0.00 2.32
262 291 8.665685 CAAGAGCTAGAATAAACCGTAATTTGT 58.334 33.333 0.00 0.00 0.00 2.83
263 292 8.788325 AGAGCTAGAATAAACCGTAATTTGTT 57.212 30.769 0.00 0.00 0.00 2.83
264 293 9.227777 AGAGCTAGAATAAACCGTAATTTGTTT 57.772 29.630 0.00 5.94 38.22 2.83
265 294 9.486857 GAGCTAGAATAAACCGTAATTTGTTTC 57.513 33.333 0.00 0.00 36.23 2.78
266 295 8.173130 AGCTAGAATAAACCGTAATTTGTTTCG 58.827 33.333 0.00 0.00 36.23 3.46
267 296 7.959109 GCTAGAATAAACCGTAATTTGTTTCGT 59.041 33.333 0.00 0.00 36.23 3.85
270 299 8.992073 AGAATAAACCGTAATTTGTTTCGTAGT 58.008 29.630 4.36 0.00 36.23 2.73
271 300 9.597999 GAATAAACCGTAATTTGTTTCGTAGTT 57.402 29.630 4.36 0.00 36.23 2.24
274 303 6.710692 ACCGTAATTTGTTTCGTAGTTAGG 57.289 37.500 0.00 0.00 0.00 2.69
275 304 6.454795 ACCGTAATTTGTTTCGTAGTTAGGA 58.545 36.000 0.00 0.00 0.00 2.94
276 305 6.587608 ACCGTAATTTGTTTCGTAGTTAGGAG 59.412 38.462 0.00 0.00 0.00 3.69
277 306 6.587608 CCGTAATTTGTTTCGTAGTTAGGAGT 59.412 38.462 0.00 0.00 0.00 3.85
278 307 7.411157 CCGTAATTTGTTTCGTAGTTAGGAGTG 60.411 40.741 0.00 0.00 0.00 3.51
279 308 7.326789 CGTAATTTGTTTCGTAGTTAGGAGTGA 59.673 37.037 0.00 0.00 0.00 3.41
280 309 8.981647 GTAATTTGTTTCGTAGTTAGGAGTGAA 58.018 33.333 0.00 0.00 0.00 3.18
281 310 8.441312 AATTTGTTTCGTAGTTAGGAGTGAAA 57.559 30.769 0.00 0.00 0.00 2.69
282 311 6.833342 TTGTTTCGTAGTTAGGAGTGAAAC 57.167 37.500 8.30 8.30 43.21 2.78
297 326 4.120646 GTGAAACTGTTCAGATCGTGTG 57.879 45.455 6.83 0.00 44.44 3.82
298 327 3.555956 GTGAAACTGTTCAGATCGTGTGT 59.444 43.478 6.83 0.00 44.44 3.72
299 328 3.555547 TGAAACTGTTCAGATCGTGTGTG 59.444 43.478 6.83 0.00 38.88 3.82
300 329 2.154854 ACTGTTCAGATCGTGTGTGG 57.845 50.000 6.83 0.00 0.00 4.17
301 330 1.412710 ACTGTTCAGATCGTGTGTGGT 59.587 47.619 6.83 0.00 0.00 4.16
302 331 2.626266 ACTGTTCAGATCGTGTGTGGTA 59.374 45.455 6.83 0.00 0.00 3.25
303 332 3.069016 ACTGTTCAGATCGTGTGTGGTAA 59.931 43.478 6.83 0.00 0.00 2.85
304 333 3.649073 TGTTCAGATCGTGTGTGGTAAG 58.351 45.455 0.00 0.00 0.00 2.34
305 334 2.993899 GTTCAGATCGTGTGTGGTAAGG 59.006 50.000 0.00 0.00 0.00 2.69
306 335 2.244695 TCAGATCGTGTGTGGTAAGGT 58.755 47.619 0.00 0.00 0.00 3.50
307 336 2.230508 TCAGATCGTGTGTGGTAAGGTC 59.769 50.000 0.00 0.00 0.00 3.85
308 337 2.029380 CAGATCGTGTGTGGTAAGGTCA 60.029 50.000 0.00 0.00 0.00 4.02
309 338 2.029290 AGATCGTGTGTGGTAAGGTCAC 60.029 50.000 0.00 0.00 35.82 3.67
310 339 0.390124 TCGTGTGTGGTAAGGTCACC 59.610 55.000 0.00 0.00 39.20 4.02
311 340 0.105224 CGTGTGTGGTAAGGTCACCA 59.895 55.000 0.00 0.00 46.46 4.17
316 345 3.250816 TGGTAAGGTCACCACCAGT 57.749 52.632 1.67 0.00 46.68 4.00
317 346 0.762418 TGGTAAGGTCACCACCAGTG 59.238 55.000 1.67 0.00 46.68 3.66
327 356 2.847327 ACCACCAGTGAGAAGTGATG 57.153 50.000 0.00 0.00 33.21 3.07
328 357 2.329267 ACCACCAGTGAGAAGTGATGA 58.671 47.619 0.00 0.00 33.21 2.92
329 358 2.037772 ACCACCAGTGAGAAGTGATGAC 59.962 50.000 0.00 0.00 33.21 3.06
330 359 2.037641 CCACCAGTGAGAAGTGATGACA 59.962 50.000 0.00 0.00 33.21 3.58
331 360 3.494924 CCACCAGTGAGAAGTGATGACAA 60.495 47.826 0.00 0.00 33.21 3.18
332 361 3.496130 CACCAGTGAGAAGTGATGACAAC 59.504 47.826 0.00 0.00 33.21 3.32
333 362 3.134623 ACCAGTGAGAAGTGATGACAACA 59.865 43.478 0.00 0.00 0.00 3.33
334 363 3.496130 CCAGTGAGAAGTGATGACAACAC 59.504 47.826 7.72 7.72 38.38 3.32
335 364 3.496130 CAGTGAGAAGTGATGACAACACC 59.504 47.826 11.83 0.00 38.82 4.16
336 365 3.389329 AGTGAGAAGTGATGACAACACCT 59.611 43.478 11.83 3.62 38.82 4.00
337 366 4.130118 GTGAGAAGTGATGACAACACCTT 58.870 43.478 11.83 6.31 38.82 3.50
338 367 5.070446 AGTGAGAAGTGATGACAACACCTTA 59.930 40.000 11.83 0.00 38.82 2.69
339 368 5.934625 GTGAGAAGTGATGACAACACCTTAT 59.065 40.000 11.83 4.13 38.82 1.73
340 369 5.934043 TGAGAAGTGATGACAACACCTTATG 59.066 40.000 11.83 0.00 38.82 1.90
341 370 6.114187 AGAAGTGATGACAACACCTTATGA 57.886 37.500 11.83 0.00 38.82 2.15
342 371 6.533730 AGAAGTGATGACAACACCTTATGAA 58.466 36.000 11.83 0.00 38.82 2.57
343 372 6.652481 AGAAGTGATGACAACACCTTATGAAG 59.348 38.462 11.83 0.00 38.82 3.02
365 394 4.217754 GTTGCAACCAAAGAACGTATCA 57.782 40.909 19.15 0.00 31.68 2.15
366 395 4.794169 GTTGCAACCAAAGAACGTATCAT 58.206 39.130 19.15 0.00 31.68 2.45
367 396 5.933790 GTTGCAACCAAAGAACGTATCATA 58.066 37.500 19.15 0.00 31.68 2.15
368 397 6.551736 GTTGCAACCAAAGAACGTATCATAT 58.448 36.000 19.15 0.00 31.68 1.78
369 398 6.117911 TGCAACCAAAGAACGTATCATATG 57.882 37.500 0.00 0.00 0.00 1.78
370 399 5.645929 TGCAACCAAAGAACGTATCATATGT 59.354 36.000 1.90 0.00 0.00 2.29
371 400 5.965334 GCAACCAAAGAACGTATCATATGTG 59.035 40.000 1.90 0.00 0.00 3.21
372 401 5.734855 ACCAAAGAACGTATCATATGTGC 57.265 39.130 1.90 0.00 0.00 4.57
373 402 4.270084 ACCAAAGAACGTATCATATGTGCG 59.730 41.667 1.90 8.18 0.00 5.34
374 403 4.270084 CCAAAGAACGTATCATATGTGCGT 59.730 41.667 12.82 12.82 37.38 5.24
375 404 5.423717 CAAAGAACGTATCATATGTGCGTC 58.576 41.667 16.74 12.17 34.56 5.19
376 405 4.569761 AGAACGTATCATATGTGCGTCT 57.430 40.909 16.74 13.50 34.56 4.18
377 406 5.684550 AGAACGTATCATATGTGCGTCTA 57.315 39.130 16.74 0.00 34.56 2.59
378 407 6.068473 AGAACGTATCATATGTGCGTCTAA 57.932 37.500 16.74 0.00 34.56 2.10
379 408 6.678878 AGAACGTATCATATGTGCGTCTAAT 58.321 36.000 16.74 6.34 34.56 1.73
380 409 6.582672 AGAACGTATCATATGTGCGTCTAATG 59.417 38.462 16.74 0.00 34.56 1.90
381 410 5.769367 ACGTATCATATGTGCGTCTAATGT 58.231 37.500 12.82 0.00 0.00 2.71
382 411 6.905578 ACGTATCATATGTGCGTCTAATGTA 58.094 36.000 12.82 0.00 0.00 2.29
383 412 7.364970 ACGTATCATATGTGCGTCTAATGTAA 58.635 34.615 12.82 0.00 0.00 2.41
384 413 8.027189 ACGTATCATATGTGCGTCTAATGTAAT 58.973 33.333 12.82 0.00 0.00 1.89
385 414 8.313931 CGTATCATATGTGCGTCTAATGTAATG 58.686 37.037 1.90 0.00 0.00 1.90
386 415 6.466308 TCATATGTGCGTCTAATGTAATGC 57.534 37.500 1.90 0.00 0.00 3.56
387 416 3.859745 ATGTGCGTCTAATGTAATGCG 57.140 42.857 0.00 0.00 0.00 4.73
388 417 1.930503 TGTGCGTCTAATGTAATGCGG 59.069 47.619 0.00 0.00 0.00 5.69
389 418 0.934496 TGCGTCTAATGTAATGCGGC 59.066 50.000 0.00 0.00 0.00 6.53
390 419 0.234884 GCGTCTAATGTAATGCGGCC 59.765 55.000 0.00 0.00 0.00 6.13
391 420 0.506932 CGTCTAATGTAATGCGGCCG 59.493 55.000 24.05 24.05 0.00 6.13
392 421 1.860676 GTCTAATGTAATGCGGCCGA 58.139 50.000 33.48 15.19 0.00 5.54
393 422 1.525619 GTCTAATGTAATGCGGCCGAC 59.474 52.381 33.48 21.14 0.00 4.79
394 423 0.865769 CTAATGTAATGCGGCCGACC 59.134 55.000 33.48 13.46 0.00 4.79
395 424 0.178301 TAATGTAATGCGGCCGACCA 59.822 50.000 33.48 19.75 34.57 4.02
396 425 0.678366 AATGTAATGCGGCCGACCAA 60.678 50.000 33.48 11.44 34.57 3.67
397 426 0.678366 ATGTAATGCGGCCGACCAAA 60.678 50.000 33.48 9.56 34.57 3.28
398 427 1.135939 GTAATGCGGCCGACCAAAC 59.864 57.895 33.48 16.42 34.57 2.93
399 428 2.392181 TAATGCGGCCGACCAAACG 61.392 57.895 33.48 0.00 34.57 3.60
407 436 2.357275 CGACCAAACGGCGGGTTA 60.357 61.111 13.24 0.00 38.08 2.85
408 437 1.960250 CGACCAAACGGCGGGTTAA 60.960 57.895 13.24 0.00 38.08 2.01
409 438 1.505477 CGACCAAACGGCGGGTTAAA 61.505 55.000 13.24 0.00 38.08 1.52
410 439 0.667453 GACCAAACGGCGGGTTAAAA 59.333 50.000 13.24 0.00 38.08 1.52
411 440 1.270274 GACCAAACGGCGGGTTAAAAT 59.730 47.619 13.24 0.00 38.08 1.82
412 441 1.687660 ACCAAACGGCGGGTTAAAATT 59.312 42.857 13.24 0.00 38.08 1.82
413 442 2.889678 ACCAAACGGCGGGTTAAAATTA 59.110 40.909 13.24 0.00 38.08 1.40
414 443 3.057386 ACCAAACGGCGGGTTAAAATTAG 60.057 43.478 13.24 0.00 38.08 1.73
415 444 3.057386 CCAAACGGCGGGTTAAAATTAGT 60.057 43.478 13.24 0.00 38.08 2.24
416 445 4.548494 CAAACGGCGGGTTAAAATTAGTT 58.452 39.130 13.24 0.00 38.08 2.24
417 446 4.852134 AACGGCGGGTTAAAATTAGTTT 57.148 36.364 13.24 0.00 37.00 2.66
418 447 4.424061 ACGGCGGGTTAAAATTAGTTTC 57.576 40.909 13.24 0.00 0.00 2.78
419 448 3.191162 ACGGCGGGTTAAAATTAGTTTCC 59.809 43.478 13.24 0.00 0.00 3.13
420 449 3.441222 CGGCGGGTTAAAATTAGTTTCCT 59.559 43.478 0.00 0.00 0.00 3.36
421 450 4.437794 CGGCGGGTTAAAATTAGTTTCCTC 60.438 45.833 0.00 0.00 0.00 3.71
422 451 4.437794 GGCGGGTTAAAATTAGTTTCCTCG 60.438 45.833 0.00 0.00 30.94 4.63
423 452 4.154737 GCGGGTTAAAATTAGTTTCCTCGT 59.845 41.667 0.64 0.00 30.62 4.18
424 453 5.624292 CGGGTTAAAATTAGTTTCCTCGTG 58.376 41.667 0.00 0.00 0.00 4.35
425 454 5.396484 GGGTTAAAATTAGTTTCCTCGTGC 58.604 41.667 0.00 0.00 0.00 5.34
426 455 5.048573 GGGTTAAAATTAGTTTCCTCGTGCA 60.049 40.000 0.00 0.00 0.00 4.57
427 456 6.084277 GGTTAAAATTAGTTTCCTCGTGCAG 58.916 40.000 0.00 0.00 0.00 4.41
428 457 3.831715 AAATTAGTTTCCTCGTGCAGC 57.168 42.857 0.00 0.00 0.00 5.25
429 458 2.770164 ATTAGTTTCCTCGTGCAGCT 57.230 45.000 0.00 0.00 0.00 4.24
430 459 3.887621 ATTAGTTTCCTCGTGCAGCTA 57.112 42.857 0.00 0.00 0.00 3.32
431 460 2.649331 TAGTTTCCTCGTGCAGCTAC 57.351 50.000 0.00 0.00 0.00 3.58
432 461 0.969894 AGTTTCCTCGTGCAGCTACT 59.030 50.000 0.00 0.00 0.00 2.57
433 462 1.344763 AGTTTCCTCGTGCAGCTACTT 59.655 47.619 0.00 0.00 0.00 2.24
434 463 1.461127 GTTTCCTCGTGCAGCTACTTG 59.539 52.381 0.00 0.00 0.00 3.16
435 464 0.679505 TTCCTCGTGCAGCTACTTGT 59.320 50.000 0.00 0.00 0.00 3.16
436 465 1.541379 TCCTCGTGCAGCTACTTGTA 58.459 50.000 0.00 0.00 0.00 2.41
437 466 2.100197 TCCTCGTGCAGCTACTTGTAT 58.900 47.619 0.00 0.00 0.00 2.29
438 467 2.159240 TCCTCGTGCAGCTACTTGTATG 60.159 50.000 0.00 0.00 0.00 2.39
439 468 1.590238 CTCGTGCAGCTACTTGTATGC 59.410 52.381 0.00 0.00 39.14 3.14
440 469 0.298707 CGTGCAGCTACTTGTATGCG 59.701 55.000 0.00 0.00 41.58 4.73
441 470 0.652592 GTGCAGCTACTTGTATGCGG 59.347 55.000 0.00 0.00 41.58 5.69
442 471 0.461870 TGCAGCTACTTGTATGCGGG 60.462 55.000 0.00 0.00 41.58 6.13
443 472 0.462047 GCAGCTACTTGTATGCGGGT 60.462 55.000 0.00 0.00 0.00 5.28
444 473 1.202486 GCAGCTACTTGTATGCGGGTA 60.202 52.381 0.00 0.00 0.00 3.69
445 474 2.740580 GCAGCTACTTGTATGCGGGTAA 60.741 50.000 0.00 0.00 0.00 2.85
446 475 2.864343 CAGCTACTTGTATGCGGGTAAC 59.136 50.000 0.00 0.00 0.00 2.50
462 491 4.680171 GGTAACCAAACTATGTGCAGAC 57.320 45.455 0.00 0.00 0.00 3.51
463 492 3.124636 GGTAACCAAACTATGTGCAGACG 59.875 47.826 0.00 0.00 0.00 4.18
464 493 2.831685 ACCAAACTATGTGCAGACGA 57.168 45.000 0.00 0.00 0.00 4.20
465 494 3.334583 ACCAAACTATGTGCAGACGAT 57.665 42.857 0.00 0.00 0.00 3.73
466 495 3.002791 ACCAAACTATGTGCAGACGATG 58.997 45.455 0.00 0.00 0.00 3.84
467 496 2.352651 CCAAACTATGTGCAGACGATGG 59.647 50.000 0.00 0.00 0.00 3.51
468 497 3.002791 CAAACTATGTGCAGACGATGGT 58.997 45.455 0.00 0.00 0.00 3.55
469 498 3.334583 AACTATGTGCAGACGATGGTT 57.665 42.857 0.00 0.00 0.00 3.67
470 499 3.334583 ACTATGTGCAGACGATGGTTT 57.665 42.857 0.00 0.00 0.00 3.27
471 500 4.465632 ACTATGTGCAGACGATGGTTTA 57.534 40.909 0.00 0.00 0.00 2.01
472 501 5.023533 ACTATGTGCAGACGATGGTTTAT 57.976 39.130 0.00 0.00 0.00 1.40
473 502 6.156748 ACTATGTGCAGACGATGGTTTATA 57.843 37.500 0.00 0.00 0.00 0.98
474 503 6.759272 ACTATGTGCAGACGATGGTTTATAT 58.241 36.000 0.00 0.00 0.00 0.86
475 504 5.929697 ATGTGCAGACGATGGTTTATATG 57.070 39.130 0.00 0.00 0.00 1.78
476 505 4.765273 TGTGCAGACGATGGTTTATATGT 58.235 39.130 0.00 0.00 0.00 2.29
477 506 5.182487 TGTGCAGACGATGGTTTATATGTT 58.818 37.500 0.00 0.00 0.00 2.71
478 507 5.645929 TGTGCAGACGATGGTTTATATGTTT 59.354 36.000 0.00 0.00 0.00 2.83
479 508 6.150307 TGTGCAGACGATGGTTTATATGTTTT 59.850 34.615 0.00 0.00 0.00 2.43
480 509 7.027161 GTGCAGACGATGGTTTATATGTTTTT 58.973 34.615 0.00 0.00 0.00 1.94
528 557 1.798087 GCAAAATGCAATGCAGCCC 59.202 52.632 14.98 0.00 43.65 5.19
529 558 0.956410 GCAAAATGCAATGCAGCCCA 60.956 50.000 14.98 0.00 43.65 5.36
530 559 0.800012 CAAAATGCAATGCAGCCCAC 59.200 50.000 14.98 0.00 43.65 4.61
531 560 0.671163 AAAATGCAATGCAGCCCACG 60.671 50.000 14.98 0.00 43.65 4.94
532 561 3.652539 AATGCAATGCAGCCCACGC 62.653 57.895 14.98 0.00 43.65 5.34
534 563 4.360964 GCAATGCAGCCCACGCAA 62.361 61.111 0.00 0.00 43.84 4.85
535 564 2.574929 CAATGCAGCCCACGCAAT 59.425 55.556 0.00 0.00 43.84 3.56
536 565 1.517694 CAATGCAGCCCACGCAATC 60.518 57.895 0.00 0.00 43.84 2.67
537 566 1.978080 AATGCAGCCCACGCAATCA 60.978 52.632 0.00 0.00 43.84 2.57
538 567 1.534336 AATGCAGCCCACGCAATCAA 61.534 50.000 0.00 0.00 43.84 2.57
539 568 1.534336 ATGCAGCCCACGCAATCAAA 61.534 50.000 0.00 0.00 43.84 2.69
540 569 1.734117 GCAGCCCACGCAATCAAAC 60.734 57.895 0.00 0.00 37.52 2.93
541 570 1.659233 CAGCCCACGCAATCAAACA 59.341 52.632 0.00 0.00 37.52 2.83
542 571 0.664166 CAGCCCACGCAATCAAACAC 60.664 55.000 0.00 0.00 37.52 3.32
543 572 1.729131 GCCCACGCAATCAAACACG 60.729 57.895 0.00 0.00 34.03 4.49
544 573 1.652012 CCCACGCAATCAAACACGT 59.348 52.632 0.00 0.00 39.78 4.49
545 574 0.385473 CCCACGCAATCAAACACGTC 60.385 55.000 0.00 0.00 36.45 4.34
546 575 0.385473 CCACGCAATCAAACACGTCC 60.385 55.000 0.00 0.00 36.45 4.79
547 576 0.586319 CACGCAATCAAACACGTCCT 59.414 50.000 0.00 0.00 36.45 3.85
548 577 1.795872 CACGCAATCAAACACGTCCTA 59.204 47.619 0.00 0.00 36.45 2.94
549 578 2.066262 ACGCAATCAAACACGTCCTAG 58.934 47.619 0.00 0.00 32.37 3.02
556 585 2.030540 TCAAACACGTCCTAGAAGACCG 60.031 50.000 0.00 0.00 32.91 4.79
569 598 6.013984 TCCTAGAAGACCGAAGTAAACCATTT 60.014 38.462 0.00 0.00 0.00 2.32
571 600 7.491696 CCTAGAAGACCGAAGTAAACCATTTAG 59.508 40.741 0.00 0.00 0.00 1.85
573 602 4.840271 AGACCGAAGTAAACCATTTAGGG 58.160 43.478 0.00 0.00 43.89 3.53
574 603 4.287845 AGACCGAAGTAAACCATTTAGGGT 59.712 41.667 0.00 0.00 45.04 4.34
575 604 4.582869 ACCGAAGTAAACCATTTAGGGTC 58.417 43.478 0.00 0.00 41.32 4.46
576 605 4.041938 ACCGAAGTAAACCATTTAGGGTCA 59.958 41.667 0.00 0.00 41.32 4.02
577 606 4.393990 CCGAAGTAAACCATTTAGGGTCAC 59.606 45.833 0.00 0.00 41.32 3.67
578 607 5.243207 CGAAGTAAACCATTTAGGGTCACT 58.757 41.667 0.00 0.00 41.32 3.41
595 624 0.109342 ACTCTGCCAGAAACCCACAG 59.891 55.000 0.00 0.00 0.00 3.66
601 630 0.178992 CCAGAAACCCACAGCTCCAA 60.179 55.000 0.00 0.00 0.00 3.53
602 631 1.242076 CAGAAACCCACAGCTCCAAG 58.758 55.000 0.00 0.00 0.00 3.61
628 657 0.741915 GAGAGCCTACGTAGCTTGCT 59.258 55.000 20.38 20.38 41.75 3.91
629 658 1.135333 GAGAGCCTACGTAGCTTGCTT 59.865 52.381 20.95 13.25 41.75 3.91
630 659 1.135333 AGAGCCTACGTAGCTTGCTTC 59.865 52.381 20.95 15.21 41.75 3.86
632 661 1.146358 GCCTACGTAGCTTGCTTCCG 61.146 60.000 17.41 6.63 0.00 4.30
633 662 1.146358 CCTACGTAGCTTGCTTCCGC 61.146 60.000 17.41 0.00 0.00 5.54
634 663 1.146358 CTACGTAGCTTGCTTCCGCC 61.146 60.000 10.14 0.00 34.43 6.13
635 664 2.877360 TACGTAGCTTGCTTCCGCCG 62.877 60.000 0.00 0.00 34.43 6.46
636 665 2.125673 GTAGCTTGCTTCCGCCGA 60.126 61.111 0.00 0.00 34.43 5.54
637 666 2.125673 TAGCTTGCTTCCGCCGAC 60.126 61.111 0.00 0.00 34.43 4.79
638 667 2.646175 TAGCTTGCTTCCGCCGACT 61.646 57.895 0.00 0.00 34.43 4.18
639 668 2.835701 TAGCTTGCTTCCGCCGACTG 62.836 60.000 0.00 0.00 34.43 3.51
640 669 3.793144 CTTGCTTCCGCCGACTGC 61.793 66.667 0.00 0.00 34.43 4.40
641 670 4.617520 TTGCTTCCGCCGACTGCA 62.618 61.111 0.00 0.00 41.33 4.41
678 708 3.814842 GCAACCCTCAAAGGAAAAATTGG 59.185 43.478 0.00 0.00 37.67 3.16
927 981 3.508762 CTTCGTTATAACACTCCACGCT 58.491 45.455 15.67 0.00 0.00 5.07
980 1038 3.141272 TCTTATCTCCTCTTCCTCCTCCC 59.859 52.174 0.00 0.00 0.00 4.30
981 1039 1.631536 ATCTCCTCTTCCTCCTCCCT 58.368 55.000 0.00 0.00 0.00 4.20
1239 1517 3.088044 GACGACGTCGACGAGGAT 58.912 61.111 41.52 23.82 43.02 3.24
1257 1535 0.749454 ATTACGAGGACGGCTACGGT 60.749 55.000 11.54 0.00 46.48 4.83
1412 1697 1.372997 CTGGGTGACGTTGGTCTCG 60.373 63.158 0.00 0.00 43.79 4.04
1582 1867 1.652947 ACCTCGACCCCAAGTACAAT 58.347 50.000 0.00 0.00 0.00 2.71
1624 1909 4.954442 CGGTACCGTTTCATTTCTTCTTC 58.046 43.478 26.39 0.00 34.35 2.87
1627 1912 5.106673 GGTACCGTTTCATTTCTTCTTCCTG 60.107 44.000 0.00 0.00 0.00 3.86
1673 1994 6.203530 TGTTTGATTTGTGTTTTTGCTTGTGA 59.796 30.769 0.00 0.00 0.00 3.58
1816 2139 4.768583 TGCACTCTATGATGCATGTGTTA 58.231 39.130 2.46 0.00 46.63 2.41
1837 2162 6.095300 TGTTAAACAGAGTTATGATGCATGGG 59.905 38.462 2.46 0.00 0.00 4.00
1838 2163 2.579873 ACAGAGTTATGATGCATGGGC 58.420 47.619 2.46 0.00 41.68 5.36
1850 2175 1.098050 GCATGGGCTTGATCGAGTTT 58.902 50.000 11.71 0.00 36.96 2.66
1857 2182 2.605366 GGCTTGATCGAGTTTAGAGCAC 59.395 50.000 11.71 0.00 33.45 4.40
1871 2196 1.802960 AGAGCACGCTGACTTCAATTG 59.197 47.619 0.00 0.00 0.00 2.32
1920 2247 6.589523 TGTATAAAGCACCAATGATGTTTTGC 59.410 34.615 0.00 0.00 33.29 3.68
1923 2250 1.461897 GCACCAATGATGTTTTGCTGC 59.538 47.619 0.00 0.00 30.93 5.25
1959 2286 6.238731 CGATATGGTAAAAATGAGTGTGCCAT 60.239 38.462 0.00 0.00 38.75 4.40
1979 2306 1.733526 GCAAACTCCGTTGGCTGTT 59.266 52.632 0.00 0.00 39.21 3.16
1980 2307 0.948678 GCAAACTCCGTTGGCTGTTA 59.051 50.000 0.00 0.00 39.21 2.41
1981 2308 1.334689 GCAAACTCCGTTGGCTGTTAC 60.335 52.381 0.00 0.00 39.21 2.50
2003 2330 5.287226 ACTAGTTTCAAGTAGTGACAACCG 58.713 41.667 6.30 0.00 42.12 4.44
2021 2348 1.811965 CCGATGAACTTGCATTCCACA 59.188 47.619 0.00 0.00 0.00 4.17
2037 2364 4.944619 TCCACATAGGCTTGTCTATCTG 57.055 45.455 0.00 0.00 37.29 2.90
2062 2389 7.337436 TGCAGTTCATGTCTCATTCAATTGATA 59.663 33.333 9.40 0.91 0.00 2.15
2123 2450 8.416329 GGAGTTGAAAAGCCATAAATGTATCAT 58.584 33.333 0.00 0.00 0.00 2.45
2133 2460 9.865321 AGCCATAAATGTATCATAATTGAATGC 57.135 29.630 0.00 0.00 34.96 3.56
2214 2546 7.616313 TCAGTACACATTATGTTCATGGTGTA 58.384 34.615 15.66 15.66 43.19 2.90
2368 2705 6.823689 TCTTACCTGGTTATGCTCAGAAAATC 59.176 38.462 3.84 0.00 33.11 2.17
2641 2979 6.729690 TGGGCATATTTAGCTAAGCAATTT 57.270 33.333 15.02 0.00 0.00 1.82
2654 2992 2.851195 AGCAATTTGTCGGACACTTCT 58.149 42.857 10.97 1.44 0.00 2.85
2717 3055 8.928733 CCTTTTTATTTGTGATGATGGTCAAAG 58.071 33.333 0.00 0.00 34.17 2.77
2932 3271 5.416326 TGCTTGTGAATCATCAATCATGTCA 59.584 36.000 0.00 0.00 37.30 3.58
2935 3274 7.167635 GCTTGTGAATCATCAATCATGTCAATC 59.832 37.037 0.00 0.00 37.30 2.67
2955 3294 4.447138 TCTTGTTTGGACTGGGTATTGT 57.553 40.909 0.00 0.00 0.00 2.71
2964 3303 3.244422 GGACTGGGTATTGTGACAGTGAA 60.244 47.826 0.00 0.00 43.61 3.18
2982 3321 4.079958 AGTGAAAGTGGGTGAAAAGTAGGT 60.080 41.667 0.00 0.00 0.00 3.08
3002 3341 2.641197 GTTGCCCGTCCAACTTCAT 58.359 52.632 7.84 0.00 41.36 2.57
3017 3356 7.012421 GTCCAACTTCATTACCCAGATATTCAC 59.988 40.741 0.00 0.00 0.00 3.18
3051 3390 6.150976 TCCTTGGCTAATTGCATATATTTCCG 59.849 38.462 0.00 0.00 45.15 4.30
3132 3471 1.743996 CTAGGGAAAGTCAAGGCAGC 58.256 55.000 0.00 0.00 0.00 5.25
3134 3473 1.600916 GGGAAAGTCAAGGCAGCGT 60.601 57.895 0.00 0.00 0.00 5.07
3159 3498 7.821846 GTGAGAGGAAAGTAGAAGATGTTGATT 59.178 37.037 0.00 0.00 0.00 2.57
3169 3508 5.535333 AGAAGATGTTGATTTGGCAGTTTG 58.465 37.500 0.00 0.00 0.00 2.93
3202 3541 8.963130 TGAAATGCTAATAATTTTTAATCCGCG 58.037 29.630 0.00 0.00 0.00 6.46
3379 3719 6.322201 CCTGAAACCACTTAGGATTGCATAAT 59.678 38.462 0.00 0.00 41.22 1.28
3426 3766 8.667592 ATTTATATAGTACTCCCTCTGTTCCC 57.332 38.462 0.00 0.00 0.00 3.97
3427 3767 5.681494 ATATAGTACTCCCTCTGTTCCCA 57.319 43.478 0.00 0.00 0.00 4.37
3428 3768 2.715763 AGTACTCCCTCTGTTCCCAA 57.284 50.000 0.00 0.00 0.00 4.12
3429 3769 2.986050 AGTACTCCCTCTGTTCCCAAA 58.014 47.619 0.00 0.00 0.00 3.28
3430 3770 3.532102 AGTACTCCCTCTGTTCCCAAAT 58.468 45.455 0.00 0.00 0.00 2.32
3431 3771 4.695606 AGTACTCCCTCTGTTCCCAAATA 58.304 43.478 0.00 0.00 0.00 1.40
3432 3772 5.289510 AGTACTCCCTCTGTTCCCAAATAT 58.710 41.667 0.00 0.00 0.00 1.28
3433 3773 5.731678 AGTACTCCCTCTGTTCCCAAATATT 59.268 40.000 0.00 0.00 0.00 1.28
3434 3774 5.536497 ACTCCCTCTGTTCCCAAATATTT 57.464 39.130 0.00 0.00 0.00 1.40
3435 3775 5.264395 ACTCCCTCTGTTCCCAAATATTTG 58.736 41.667 19.40 19.40 37.90 2.32
3436 3776 5.222337 ACTCCCTCTGTTCCCAAATATTTGT 60.222 40.000 23.24 0.77 36.45 2.83
3437 3777 5.261216 TCCCTCTGTTCCCAAATATTTGTC 58.739 41.667 23.24 12.77 36.45 3.18
3438 3778 5.015178 TCCCTCTGTTCCCAAATATTTGTCT 59.985 40.000 23.24 0.00 36.45 3.41
3439 3779 5.716703 CCCTCTGTTCCCAAATATTTGTCTT 59.283 40.000 23.24 0.00 36.45 3.01
3440 3780 6.211384 CCCTCTGTTCCCAAATATTTGTCTTT 59.789 38.462 23.24 0.00 36.45 2.52
3441 3781 7.315890 CCTCTGTTCCCAAATATTTGTCTTTC 58.684 38.462 23.24 11.94 36.45 2.62
3442 3782 7.177392 CCTCTGTTCCCAAATATTTGTCTTTCT 59.823 37.037 23.24 0.00 36.45 2.52
3443 3783 9.231297 CTCTGTTCCCAAATATTTGTCTTTCTA 57.769 33.333 23.24 6.60 36.45 2.10
3444 3784 9.231297 TCTGTTCCCAAATATTTGTCTTTCTAG 57.769 33.333 23.24 13.55 36.45 2.43
3445 3785 9.231297 CTGTTCCCAAATATTTGTCTTTCTAGA 57.769 33.333 23.24 7.17 36.45 2.43
3446 3786 9.753674 TGTTCCCAAATATTTGTCTTTCTAGAT 57.246 29.630 23.24 0.00 36.45 1.98
3460 3800 9.958180 TGTCTTTCTAGATATTTCAAATGGACA 57.042 29.630 0.00 0.00 31.86 4.02
3466 3806 9.513906 TCTAGATATTTCAAATGGACAACAACA 57.486 29.630 0.00 0.00 0.00 3.33
3470 3810 8.909708 ATATTTCAAATGGACAACAACATACG 57.090 30.769 0.00 0.00 0.00 3.06
3471 3811 4.757799 TCAAATGGACAACAACATACGG 57.242 40.909 0.00 0.00 0.00 4.02
3472 3812 4.390264 TCAAATGGACAACAACATACGGA 58.610 39.130 0.00 0.00 0.00 4.69
3473 3813 5.007034 TCAAATGGACAACAACATACGGAT 58.993 37.500 0.00 0.00 0.00 4.18
3474 3814 4.963276 AATGGACAACAACATACGGATG 57.037 40.909 5.94 5.94 39.16 3.51
3476 3816 4.538746 TGGACAACAACATACGGATGTA 57.461 40.909 15.10 0.00 45.93 2.29
3477 3817 5.092554 TGGACAACAACATACGGATGTAT 57.907 39.130 15.10 2.23 45.93 2.29
3517 3857 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
3518 3858 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
3519 3859 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
3520 3860 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
3521 3861 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
3522 3862 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
3523 3863 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
3524 3864 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
3525 3865 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
3526 3866 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
3527 3867 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
3528 3868 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
3529 3869 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
3530 3870 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
3531 3871 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
3532 3872 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
3533 3873 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
3534 3874 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
3535 3875 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
3536 3876 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
3537 3877 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
3538 3878 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
3539 3879 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
3540 3880 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
3541 3881 7.149307 TCGTATGTAGTCACTTGTTGAAATCA 58.851 34.615 0.00 0.00 35.39 2.57
3542 3882 7.115805 TCGTATGTAGTCACTTGTTGAAATCAC 59.884 37.037 0.00 0.00 35.39 3.06
3543 3883 7.116376 CGTATGTAGTCACTTGTTGAAATCACT 59.884 37.037 0.00 0.00 35.39 3.41
3544 3884 9.419297 GTATGTAGTCACTTGTTGAAATCACTA 57.581 33.333 0.00 0.00 35.39 2.74
3545 3885 7.946655 TGTAGTCACTTGTTGAAATCACTAG 57.053 36.000 0.00 0.00 35.39 2.57
3546 3886 7.722363 TGTAGTCACTTGTTGAAATCACTAGA 58.278 34.615 0.00 0.00 35.39 2.43
3547 3887 8.201464 TGTAGTCACTTGTTGAAATCACTAGAA 58.799 33.333 0.00 0.00 35.39 2.10
3548 3888 9.042008 GTAGTCACTTGTTGAAATCACTAGAAA 57.958 33.333 0.00 0.00 35.39 2.52
3549 3889 8.147642 AGTCACTTGTTGAAATCACTAGAAAG 57.852 34.615 0.00 0.00 35.39 2.62
3550 3890 7.987458 AGTCACTTGTTGAAATCACTAGAAAGA 59.013 33.333 0.00 0.00 35.39 2.52
3551 3891 8.064814 GTCACTTGTTGAAATCACTAGAAAGAC 58.935 37.037 0.00 0.00 35.39 3.01
3552 3892 7.768582 TCACTTGTTGAAATCACTAGAAAGACA 59.231 33.333 0.00 0.00 0.00 3.41
3553 3893 8.397906 CACTTGTTGAAATCACTAGAAAGACAA 58.602 33.333 0.00 0.00 0.00 3.18
3554 3894 8.956426 ACTTGTTGAAATCACTAGAAAGACAAA 58.044 29.630 0.00 0.00 0.00 2.83
3555 3895 9.443283 CTTGTTGAAATCACTAGAAAGACAAAG 57.557 33.333 0.00 0.00 0.00 2.77
3556 3896 8.731275 TGTTGAAATCACTAGAAAGACAAAGA 57.269 30.769 0.00 0.00 0.00 2.52
3557 3897 9.342308 TGTTGAAATCACTAGAAAGACAAAGAT 57.658 29.630 0.00 0.00 0.00 2.40
3565 3905 9.490379 TCACTAGAAAGACAAAGATTTAGGAAC 57.510 33.333 0.00 0.00 0.00 3.62
3566 3906 8.436200 CACTAGAAAGACAAAGATTTAGGAACG 58.564 37.037 0.00 0.00 0.00 3.95
3567 3907 6.803154 AGAAAGACAAAGATTTAGGAACGG 57.197 37.500 0.00 0.00 0.00 4.44
3568 3908 6.531021 AGAAAGACAAAGATTTAGGAACGGA 58.469 36.000 0.00 0.00 0.00 4.69
3569 3909 6.651225 AGAAAGACAAAGATTTAGGAACGGAG 59.349 38.462 0.00 0.00 0.00 4.63
3570 3910 4.833390 AGACAAAGATTTAGGAACGGAGG 58.167 43.478 0.00 0.00 0.00 4.30
3571 3911 3.939592 GACAAAGATTTAGGAACGGAGGG 59.060 47.826 0.00 0.00 0.00 4.30
3686 4026 4.071423 TGCAGCAACACATACAGTACAAT 58.929 39.130 0.00 0.00 0.00 2.71
3694 4034 8.664798 GCAACACATACAGTACAATCTTGATAA 58.335 33.333 0.00 0.00 0.00 1.75
3796 4137 0.391130 GCTATGGTCTGCCGTGTGAA 60.391 55.000 0.00 0.00 37.67 3.18
3930 4272 9.108449 CGTGAATATAAGTCATTCTAGAACTCG 57.892 37.037 7.48 0.00 34.21 4.18
3938 4280 3.119459 TCATTCTAGAACTCGTGCCAGTC 60.119 47.826 7.48 0.00 0.00 3.51
3941 4283 2.826128 TCTAGAACTCGTGCCAGTCAAT 59.174 45.455 0.00 0.00 0.00 2.57
3942 4284 2.550830 AGAACTCGTGCCAGTCAATT 57.449 45.000 0.00 0.00 0.00 2.32
3943 4285 2.851195 AGAACTCGTGCCAGTCAATTT 58.149 42.857 0.00 0.00 0.00 1.82
3944 4286 3.214328 AGAACTCGTGCCAGTCAATTTT 58.786 40.909 0.00 0.00 0.00 1.82
3945 4287 3.632145 AGAACTCGTGCCAGTCAATTTTT 59.368 39.130 0.00 0.00 0.00 1.94
3947 4289 5.473504 AGAACTCGTGCCAGTCAATTTTTAT 59.526 36.000 0.00 0.00 0.00 1.40
3948 4290 5.705609 ACTCGTGCCAGTCAATTTTTATT 57.294 34.783 0.00 0.00 0.00 1.40
3949 4291 6.084326 ACTCGTGCCAGTCAATTTTTATTT 57.916 33.333 0.00 0.00 0.00 1.40
3982 4324 7.978975 TGGCCTTCAATGTATAAAAACTAATGC 59.021 33.333 3.32 0.00 0.00 3.56
4272 4616 5.769662 AGAGCCTATGACATTGTCAAAAACA 59.230 36.000 22.44 0.00 45.96 2.83
4308 4652 6.440965 AGTTACAGAGGGAGTAGCAGTTAAAT 59.559 38.462 0.00 0.00 0.00 1.40
4428 4773 4.225942 AGAGTTGATAAGACAGGGATTGCA 59.774 41.667 0.00 0.00 0.00 4.08
4431 4776 4.508551 TGATAAGACAGGGATTGCACAT 57.491 40.909 0.00 0.00 0.00 3.21
4488 4833 3.577848 ACCTTATTGCAAACTTCATGGCA 59.422 39.130 1.71 0.00 0.00 4.92
4670 5016 4.018506 TCAATGGGACCTTCAATCAAGCTA 60.019 41.667 0.00 0.00 0.00 3.32
4700 5046 0.179073 AAATGCTCGACTATGGCGCT 60.179 50.000 7.64 0.00 0.00 5.92
4728 5074 4.494362 CGTCTAACTAGATGTCACCACGAG 60.494 50.000 0.00 0.00 35.20 4.18
4729 5075 2.656560 AACTAGATGTCACCACGAGC 57.343 50.000 0.00 0.00 0.00 5.03
4730 5076 1.545841 ACTAGATGTCACCACGAGCA 58.454 50.000 0.00 0.00 0.00 4.26
4776 5122 1.212935 ACCAACTTCACAGGCTTGACT 59.787 47.619 1.40 0.00 0.00 3.41
4803 5149 5.299279 CCATCCCTTGTGATAAATACACACC 59.701 44.000 0.00 0.00 45.82 4.16
4910 5256 1.069022 CAGTGCCCTGATCAACAAACG 60.069 52.381 0.00 0.00 41.50 3.60
4911 5257 0.240945 GTGCCCTGATCAACAAACGG 59.759 55.000 0.00 0.00 0.00 4.44
4943 5289 5.470437 TGTTGGTCGTTTGTATTTATGAGCA 59.530 36.000 0.00 0.00 36.36 4.26
5061 5407 2.751036 TCACCCGCCGTCATCGTA 60.751 61.111 0.00 0.00 35.01 3.43
5080 5426 1.388547 AAAGTTGCTGCGGTTCTTGA 58.611 45.000 0.00 0.00 0.00 3.02
5087 5433 1.130561 GCTGCGGTTCTTGAACCATAC 59.869 52.381 26.12 17.28 42.97 2.39
5159 5505 6.893958 AAAATGAGTAGTCTTCGCTATGTG 57.106 37.500 0.00 0.00 0.00 3.21
5212 5558 7.053498 TCAATCATTTGCCTAGTTGCACTATA 58.947 34.615 0.00 0.00 41.88 1.31
5213 5559 7.720957 TCAATCATTTGCCTAGTTGCACTATAT 59.279 33.333 0.00 0.00 41.88 0.86
5232 5578 7.557719 CACTATATTTTTCCTCCTGTGGATTGT 59.442 37.037 0.00 0.00 35.83 2.71
5233 5579 8.778059 ACTATATTTTTCCTCCTGTGGATTGTA 58.222 33.333 0.00 0.00 35.83 2.41
5234 5580 9.799106 CTATATTTTTCCTCCTGTGGATTGTAT 57.201 33.333 0.00 0.00 35.83 2.29
5242 5588 3.587061 TCCTGTGGATTGTATGAGGTTGT 59.413 43.478 0.00 0.00 0.00 3.32
5243 5589 4.780554 TCCTGTGGATTGTATGAGGTTGTA 59.219 41.667 0.00 0.00 0.00 2.41
5244 5590 5.428457 TCCTGTGGATTGTATGAGGTTGTAT 59.572 40.000 0.00 0.00 0.00 2.29
5245 5591 5.760253 CCTGTGGATTGTATGAGGTTGTATC 59.240 44.000 0.00 0.00 0.00 2.24
5246 5592 5.356426 TGTGGATTGTATGAGGTTGTATCG 58.644 41.667 0.00 0.00 0.00 2.92
5247 5593 4.211374 GTGGATTGTATGAGGTTGTATCGC 59.789 45.833 0.00 0.00 0.00 4.58
5248 5594 3.428870 GGATTGTATGAGGTTGTATCGCG 59.571 47.826 0.00 0.00 0.00 5.87
5249 5595 3.513680 TTGTATGAGGTTGTATCGCGT 57.486 42.857 5.77 0.00 0.00 6.01
5250 5596 3.074504 TGTATGAGGTTGTATCGCGTC 57.925 47.619 5.77 0.00 0.00 5.19
5251 5597 2.686405 TGTATGAGGTTGTATCGCGTCT 59.314 45.455 5.77 0.00 0.00 4.18
5252 5598 2.209838 ATGAGGTTGTATCGCGTCTG 57.790 50.000 5.77 0.00 0.00 3.51
5253 5599 1.170442 TGAGGTTGTATCGCGTCTGA 58.830 50.000 5.77 0.00 0.00 3.27
5254 5600 1.542472 TGAGGTTGTATCGCGTCTGAA 59.458 47.619 5.77 0.00 0.00 3.02
5255 5601 2.029739 TGAGGTTGTATCGCGTCTGAAA 60.030 45.455 5.77 0.00 0.00 2.69
5256 5602 2.334838 AGGTTGTATCGCGTCTGAAAC 58.665 47.619 5.77 5.98 0.00 2.78
5257 5603 1.392510 GGTTGTATCGCGTCTGAAACC 59.607 52.381 5.77 11.42 0.00 3.27
5258 5604 1.392510 GTTGTATCGCGTCTGAAACCC 59.607 52.381 5.77 0.00 0.00 4.11
5259 5605 0.108520 TGTATCGCGTCTGAAACCCC 60.109 55.000 5.77 0.00 0.00 4.95
5260 5606 0.175073 GTATCGCGTCTGAAACCCCT 59.825 55.000 5.77 0.00 0.00 4.79
5261 5607 0.899720 TATCGCGTCTGAAACCCCTT 59.100 50.000 5.77 0.00 0.00 3.95
5262 5608 0.036306 ATCGCGTCTGAAACCCCTTT 59.964 50.000 5.77 0.00 0.00 3.11
5263 5609 0.179040 TCGCGTCTGAAACCCCTTTT 60.179 50.000 5.77 0.00 0.00 2.27
5264 5610 0.666374 CGCGTCTGAAACCCCTTTTT 59.334 50.000 0.00 0.00 0.00 1.94
5311 5657 8.762481 ACCTAAAGTGAAAACTTTGGTAAGAT 57.238 30.769 16.73 0.00 39.89 2.40
5324 5670 5.964958 TTGGTAAGATTTTTCTCCTGCAG 57.035 39.130 6.78 6.78 0.00 4.41
5333 5679 2.775911 TTCTCCTGCAGACTGAATGG 57.224 50.000 17.39 4.63 0.00 3.16
5340 5686 1.021390 GCAGACTGAATGGGGTCGTG 61.021 60.000 6.65 0.00 37.52 4.35
5342 5688 0.608640 AGACTGAATGGGGTCGTGTC 59.391 55.000 0.00 0.00 37.52 3.67
5344 5690 1.292223 CTGAATGGGGTCGTGTCGT 59.708 57.895 0.00 0.00 0.00 4.34
5346 5692 1.740296 GAATGGGGTCGTGTCGTGG 60.740 63.158 0.00 0.00 0.00 4.94
5347 5693 2.162338 GAATGGGGTCGTGTCGTGGA 62.162 60.000 0.00 0.00 0.00 4.02
5353 5711 1.153823 GTCGTGTCGTGGAGGGATG 60.154 63.158 0.00 0.00 0.00 3.51
5357 5715 0.741221 GTGTCGTGGAGGGATGCTTC 60.741 60.000 0.00 0.00 0.00 3.86
5368 5726 1.067060 GGGATGCTTCGGTAAAATGCC 59.933 52.381 0.00 0.00 0.00 4.40
5376 5734 0.179200 CGGTAAAATGCCAGTGACGC 60.179 55.000 0.00 0.00 0.00 5.19
5377 5735 0.179200 GGTAAAATGCCAGTGACGCG 60.179 55.000 3.53 3.53 0.00 6.01
5378 5736 0.515564 GTAAAATGCCAGTGACGCGT 59.484 50.000 13.85 13.85 0.00 6.01
5380 5738 1.231221 AAAATGCCAGTGACGCGTAA 58.769 45.000 13.97 0.00 0.00 3.18
5383 5741 1.448985 ATGCCAGTGACGCGTAATTT 58.551 45.000 13.97 0.00 0.00 1.82
5422 6162 4.757149 AGTGACAAAGTGGTAAGATGCTTC 59.243 41.667 0.00 0.00 0.00 3.86
5427 6167 5.934625 ACAAAGTGGTAAGATGCTTCTACAG 59.065 40.000 2.02 0.00 0.00 2.74
5431 6171 5.720041 AGTGGTAAGATGCTTCTACAGGTTA 59.280 40.000 2.02 0.00 0.00 2.85
5463 6205 7.966246 AGTGAGTAGTCTAGGTAATCATACG 57.034 40.000 0.00 0.00 32.51 3.06
5488 6230 7.120285 CGATTATGTATGATGGCCTCTTTGAAT 59.880 37.037 3.32 0.00 0.00 2.57
5586 6328 7.176589 TGAGGTTGTTTTGTTTTTGTAGGAT 57.823 32.000 0.00 0.00 0.00 3.24
5609 6351 9.067986 GGATTATACCCATAGAAACTTTTCCTG 57.932 37.037 0.00 0.00 37.92 3.86
5690 6432 4.592942 TGGGATCATCCTTTGTTTCTCTG 58.407 43.478 2.93 0.00 36.57 3.35
5711 6453 6.623486 TCTGACGATGCAAATTCAATCATTT 58.377 32.000 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.179048 TGCAGGATCCGGTTATGCAG 60.179 55.000 18.81 2.47 41.65 4.41
25 26 1.881973 CCATTGCAGGATCCGGTTATG 59.118 52.381 13.75 15.14 0.00 1.90
31 32 1.076777 AACCCCATTGCAGGATCCG 60.077 57.895 5.98 2.47 0.00 4.18
65 66 2.103263 GGCGTCACATCTTCCTCCTTAT 59.897 50.000 0.00 0.00 0.00 1.73
73 74 0.109272 TCGTCAGGCGTCACATCTTC 60.109 55.000 0.00 0.00 42.13 2.87
76 77 0.458543 ACATCGTCAGGCGTCACATC 60.459 55.000 0.00 0.00 42.13 3.06
120 121 1.267806 CAGGCTTCGTTGTCAAATGCT 59.732 47.619 0.00 0.00 0.00 3.79
141 142 5.774690 TGCCCACTCTATCATTTTGTTCTTT 59.225 36.000 0.00 0.00 0.00 2.52
152 153 0.983467 TGCTTGTGCCCACTCTATCA 59.017 50.000 0.00 0.00 38.71 2.15
153 154 2.113860 TTGCTTGTGCCCACTCTATC 57.886 50.000 0.00 0.00 38.71 2.08
156 157 2.372264 CATATTGCTTGTGCCCACTCT 58.628 47.619 0.00 0.00 38.71 3.24
168 169 6.692849 TGATCTCTGTTATCCCATATTGCT 57.307 37.500 0.00 0.00 0.00 3.91
174 175 9.741198 ATCCTTATATGATCTCTGTTATCCCAT 57.259 33.333 0.00 0.00 0.00 4.00
207 236 2.512705 CTGCCCTTGCTCTTCTTCTTT 58.487 47.619 0.00 0.00 38.71 2.52
212 241 1.849823 ACCCTGCCCTTGCTCTTCT 60.850 57.895 0.00 0.00 38.71 2.85
222 251 0.890996 CTCTTGTTGTCACCCTGCCC 60.891 60.000 0.00 0.00 0.00 5.36
223 252 1.518903 GCTCTTGTTGTCACCCTGCC 61.519 60.000 0.00 0.00 0.00 4.85
229 258 6.401153 CGGTTTATTCTAGCTCTTGTTGTCAC 60.401 42.308 0.00 0.00 0.00 3.67
230 259 5.637810 CGGTTTATTCTAGCTCTTGTTGTCA 59.362 40.000 0.00 0.00 0.00 3.58
231 260 5.638234 ACGGTTTATTCTAGCTCTTGTTGTC 59.362 40.000 0.00 0.00 0.00 3.18
233 262 7.591006 TTACGGTTTATTCTAGCTCTTGTTG 57.409 36.000 0.00 0.00 0.00 3.33
235 264 8.665685 CAAATTACGGTTTATTCTAGCTCTTGT 58.334 33.333 0.00 0.00 0.00 3.16
236 265 8.665685 ACAAATTACGGTTTATTCTAGCTCTTG 58.334 33.333 0.00 0.00 0.00 3.02
244 273 8.992073 ACTACGAAACAAATTACGGTTTATTCT 58.008 29.630 0.00 0.00 37.35 2.40
245 274 9.597999 AACTACGAAACAAATTACGGTTTATTC 57.402 29.630 0.00 0.00 37.35 1.75
248 277 8.707839 CCTAACTACGAAACAAATTACGGTTTA 58.292 33.333 0.00 0.00 37.35 2.01
249 278 7.440856 TCCTAACTACGAAACAAATTACGGTTT 59.559 33.333 0.00 3.34 39.74 3.27
250 279 6.928492 TCCTAACTACGAAACAAATTACGGTT 59.072 34.615 0.00 0.00 0.00 4.44
251 280 6.454795 TCCTAACTACGAAACAAATTACGGT 58.545 36.000 0.00 0.00 0.00 4.83
252 281 6.587608 ACTCCTAACTACGAAACAAATTACGG 59.412 38.462 0.00 0.00 0.00 4.02
253 282 7.326789 TCACTCCTAACTACGAAACAAATTACG 59.673 37.037 0.00 0.00 0.00 3.18
254 283 8.524870 TCACTCCTAACTACGAAACAAATTAC 57.475 34.615 0.00 0.00 0.00 1.89
255 284 9.545105 TTTCACTCCTAACTACGAAACAAATTA 57.455 29.630 0.00 0.00 0.00 1.40
256 285 8.340443 GTTTCACTCCTAACTACGAAACAAATT 58.660 33.333 0.00 0.00 41.02 1.82
257 286 7.713942 AGTTTCACTCCTAACTACGAAACAAAT 59.286 33.333 13.44 0.00 42.81 2.32
258 287 7.010738 CAGTTTCACTCCTAACTACGAAACAAA 59.989 37.037 13.44 0.00 42.81 2.83
259 288 6.477688 CAGTTTCACTCCTAACTACGAAACAA 59.522 38.462 13.44 0.00 42.81 2.83
260 289 5.981315 CAGTTTCACTCCTAACTACGAAACA 59.019 40.000 13.44 0.00 42.81 2.83
261 290 5.981915 ACAGTTTCACTCCTAACTACGAAAC 59.018 40.000 0.00 0.00 41.44 2.78
262 291 6.152932 ACAGTTTCACTCCTAACTACGAAA 57.847 37.500 0.00 0.00 33.49 3.46
263 292 5.779529 ACAGTTTCACTCCTAACTACGAA 57.220 39.130 0.00 0.00 33.49 3.85
264 293 5.300034 TGAACAGTTTCACTCCTAACTACGA 59.700 40.000 0.00 0.00 36.79 3.43
265 294 5.526115 TGAACAGTTTCACTCCTAACTACG 58.474 41.667 0.00 0.00 36.79 3.51
266 295 6.746120 TCTGAACAGTTTCACTCCTAACTAC 58.254 40.000 1.73 0.00 36.79 2.73
267 296 6.971726 TCTGAACAGTTTCACTCCTAACTA 57.028 37.500 1.73 0.00 36.79 2.24
268 297 5.871396 TCTGAACAGTTTCACTCCTAACT 57.129 39.130 1.73 0.00 36.79 2.24
269 298 5.346281 CGATCTGAACAGTTTCACTCCTAAC 59.654 44.000 1.73 0.00 36.79 2.34
270 299 5.010719 ACGATCTGAACAGTTTCACTCCTAA 59.989 40.000 0.00 0.00 36.79 2.69
271 300 4.523173 ACGATCTGAACAGTTTCACTCCTA 59.477 41.667 0.00 0.00 36.79 2.94
272 301 3.322254 ACGATCTGAACAGTTTCACTCCT 59.678 43.478 0.00 0.00 36.79 3.69
273 302 3.430218 CACGATCTGAACAGTTTCACTCC 59.570 47.826 0.00 0.00 36.79 3.85
274 303 4.051922 ACACGATCTGAACAGTTTCACTC 58.948 43.478 0.00 0.00 36.79 3.51
275 304 3.804325 CACACGATCTGAACAGTTTCACT 59.196 43.478 0.00 0.00 36.79 3.41
276 305 3.555956 ACACACGATCTGAACAGTTTCAC 59.444 43.478 0.00 0.00 36.79 3.18
277 306 3.555547 CACACACGATCTGAACAGTTTCA 59.444 43.478 0.00 0.00 39.55 2.69
278 307 3.059597 CCACACACGATCTGAACAGTTTC 60.060 47.826 0.00 0.84 0.00 2.78
279 308 2.872245 CCACACACGATCTGAACAGTTT 59.128 45.455 0.00 0.00 0.00 2.66
280 309 2.158957 ACCACACACGATCTGAACAGTT 60.159 45.455 0.00 0.00 0.00 3.16
281 310 1.412710 ACCACACACGATCTGAACAGT 59.587 47.619 0.00 0.00 0.00 3.55
282 311 2.154854 ACCACACACGATCTGAACAG 57.845 50.000 0.00 0.00 0.00 3.16
283 312 3.554129 CCTTACCACACACGATCTGAACA 60.554 47.826 0.00 0.00 0.00 3.18
284 313 2.993899 CCTTACCACACACGATCTGAAC 59.006 50.000 0.00 0.00 0.00 3.18
285 314 2.631062 ACCTTACCACACACGATCTGAA 59.369 45.455 0.00 0.00 0.00 3.02
286 315 2.230508 GACCTTACCACACACGATCTGA 59.769 50.000 0.00 0.00 0.00 3.27
287 316 2.029380 TGACCTTACCACACACGATCTG 60.029 50.000 0.00 0.00 0.00 2.90
288 317 2.029290 GTGACCTTACCACACACGATCT 60.029 50.000 0.00 0.00 34.81 2.75
289 318 2.334838 GTGACCTTACCACACACGATC 58.665 52.381 0.00 0.00 34.81 3.69
290 319 1.001633 GGTGACCTTACCACACACGAT 59.998 52.381 0.00 0.00 40.54 3.73
291 320 0.390124 GGTGACCTTACCACACACGA 59.610 55.000 0.00 0.00 40.54 4.35
292 321 0.105224 TGGTGACCTTACCACACACG 59.895 55.000 2.11 0.00 45.46 4.49
307 336 2.037641 TCATCACTTCTCACTGGTGGTG 59.962 50.000 0.70 0.00 46.60 4.17
308 337 2.037772 GTCATCACTTCTCACTGGTGGT 59.962 50.000 0.70 0.00 0.00 4.16
309 338 2.037641 TGTCATCACTTCTCACTGGTGG 59.962 50.000 0.70 0.00 0.00 4.61
310 339 3.391506 TGTCATCACTTCTCACTGGTG 57.608 47.619 0.00 0.00 0.00 4.17
311 340 3.134623 TGTTGTCATCACTTCTCACTGGT 59.865 43.478 0.00 0.00 0.00 4.00
312 341 3.496130 GTGTTGTCATCACTTCTCACTGG 59.504 47.826 6.76 0.00 33.59 4.00
313 342 3.496130 GGTGTTGTCATCACTTCTCACTG 59.504 47.826 12.61 0.00 36.25 3.66
314 343 3.389329 AGGTGTTGTCATCACTTCTCACT 59.611 43.478 12.61 0.00 36.25 3.41
315 344 3.733337 AGGTGTTGTCATCACTTCTCAC 58.267 45.455 12.61 0.00 36.25 3.51
316 345 4.422073 AAGGTGTTGTCATCACTTCTCA 57.578 40.909 12.61 0.00 36.25 3.27
317 346 6.166279 TCATAAGGTGTTGTCATCACTTCTC 58.834 40.000 12.61 0.00 36.25 2.87
318 347 6.114187 TCATAAGGTGTTGTCATCACTTCT 57.886 37.500 12.61 1.62 36.25 2.85
319 348 6.128172 CCTTCATAAGGTGTTGTCATCACTTC 60.128 42.308 12.61 0.00 43.95 3.01
320 349 5.707298 CCTTCATAAGGTGTTGTCATCACTT 59.293 40.000 12.61 3.77 43.95 3.16
321 350 5.248640 CCTTCATAAGGTGTTGTCATCACT 58.751 41.667 12.61 0.00 43.95 3.41
322 351 5.551760 CCTTCATAAGGTGTTGTCATCAC 57.448 43.478 5.60 5.60 43.95 3.06
344 373 4.217754 TGATACGTTCTTTGGTTGCAAC 57.782 40.909 21.59 21.59 0.00 4.17
345 374 6.150307 ACATATGATACGTTCTTTGGTTGCAA 59.850 34.615 10.38 0.00 0.00 4.08
346 375 5.645929 ACATATGATACGTTCTTTGGTTGCA 59.354 36.000 10.38 0.00 0.00 4.08
347 376 5.965334 CACATATGATACGTTCTTTGGTTGC 59.035 40.000 10.38 0.00 0.00 4.17
348 377 5.965334 GCACATATGATACGTTCTTTGGTTG 59.035 40.000 10.38 0.00 0.00 3.77
349 378 5.220586 CGCACATATGATACGTTCTTTGGTT 60.221 40.000 10.38 0.00 0.00 3.67
350 379 4.270084 CGCACATATGATACGTTCTTTGGT 59.730 41.667 10.38 0.00 0.00 3.67
351 380 4.270084 ACGCACATATGATACGTTCTTTGG 59.730 41.667 10.38 0.00 32.09 3.28
352 381 5.232202 AGACGCACATATGATACGTTCTTTG 59.768 40.000 10.38 0.00 37.05 2.77
353 382 5.348986 AGACGCACATATGATACGTTCTTT 58.651 37.500 10.38 1.78 37.05 2.52
354 383 4.933330 AGACGCACATATGATACGTTCTT 58.067 39.130 10.38 3.89 37.05 2.52
355 384 4.569761 AGACGCACATATGATACGTTCT 57.430 40.909 10.38 11.25 37.05 3.01
356 385 6.362551 ACATTAGACGCACATATGATACGTTC 59.637 38.462 10.38 9.52 37.05 3.95
357 386 6.213677 ACATTAGACGCACATATGATACGTT 58.786 36.000 10.38 8.97 37.05 3.99
358 387 5.769367 ACATTAGACGCACATATGATACGT 58.231 37.500 10.38 14.96 40.11 3.57
359 388 7.790861 TTACATTAGACGCACATATGATACG 57.209 36.000 10.38 11.88 0.00 3.06
360 389 8.110612 GCATTACATTAGACGCACATATGATAC 58.889 37.037 10.38 0.00 0.00 2.24
361 390 7.009174 CGCATTACATTAGACGCACATATGATA 59.991 37.037 10.38 0.00 0.00 2.15
362 391 6.183360 CGCATTACATTAGACGCACATATGAT 60.183 38.462 10.38 0.00 0.00 2.45
363 392 5.118510 CGCATTACATTAGACGCACATATGA 59.881 40.000 10.38 0.00 0.00 2.15
364 393 5.308147 CGCATTACATTAGACGCACATATG 58.692 41.667 0.00 0.00 0.00 1.78
365 394 4.388773 CCGCATTACATTAGACGCACATAT 59.611 41.667 0.00 0.00 0.00 1.78
366 395 3.738791 CCGCATTACATTAGACGCACATA 59.261 43.478 0.00 0.00 0.00 2.29
367 396 2.543848 CCGCATTACATTAGACGCACAT 59.456 45.455 0.00 0.00 0.00 3.21
368 397 1.930503 CCGCATTACATTAGACGCACA 59.069 47.619 0.00 0.00 0.00 4.57
369 398 1.332904 GCCGCATTACATTAGACGCAC 60.333 52.381 0.00 0.00 0.00 5.34
370 399 0.934496 GCCGCATTACATTAGACGCA 59.066 50.000 0.00 0.00 0.00 5.24
371 400 0.234884 GGCCGCATTACATTAGACGC 59.765 55.000 0.00 0.00 0.00 5.19
372 401 0.506932 CGGCCGCATTACATTAGACG 59.493 55.000 14.67 0.00 0.00 4.18
373 402 1.525619 GTCGGCCGCATTACATTAGAC 59.474 52.381 23.51 4.63 0.00 2.59
374 403 1.539496 GGTCGGCCGCATTACATTAGA 60.539 52.381 23.51 0.00 0.00 2.10
375 404 0.865769 GGTCGGCCGCATTACATTAG 59.134 55.000 23.51 0.00 0.00 1.73
376 405 0.178301 TGGTCGGCCGCATTACATTA 59.822 50.000 23.51 0.00 37.67 1.90
377 406 0.678366 TTGGTCGGCCGCATTACATT 60.678 50.000 23.51 0.00 37.67 2.71
378 407 0.678366 TTTGGTCGGCCGCATTACAT 60.678 50.000 23.51 0.00 37.67 2.29
379 408 1.302591 TTTGGTCGGCCGCATTACA 60.303 52.632 23.51 11.60 37.67 2.41
380 409 1.135939 GTTTGGTCGGCCGCATTAC 59.864 57.895 23.51 13.85 37.67 1.89
381 410 2.392181 CGTTTGGTCGGCCGCATTA 61.392 57.895 23.51 0.00 37.67 1.90
382 411 3.732892 CGTTTGGTCGGCCGCATT 61.733 61.111 23.51 0.00 37.67 3.56
390 419 1.505477 TTTAACCCGCCGTTTGGTCG 61.505 55.000 0.00 0.00 35.79 4.79
391 420 0.667453 TTTTAACCCGCCGTTTGGTC 59.333 50.000 0.00 0.00 35.79 4.02
392 421 1.330234 ATTTTAACCCGCCGTTTGGT 58.670 45.000 0.00 0.00 35.79 3.67
393 422 2.442212 AATTTTAACCCGCCGTTTGG 57.558 45.000 0.00 0.00 35.79 3.28
394 423 4.163458 ACTAATTTTAACCCGCCGTTTG 57.837 40.909 0.00 0.00 35.79 2.93
395 424 4.852134 AACTAATTTTAACCCGCCGTTT 57.148 36.364 0.00 0.00 35.79 3.60
396 425 4.321156 GGAAACTAATTTTAACCCGCCGTT 60.321 41.667 0.00 0.00 38.57 4.44
397 426 3.191162 GGAAACTAATTTTAACCCGCCGT 59.809 43.478 0.00 0.00 0.00 5.68
398 427 3.441222 AGGAAACTAATTTTAACCCGCCG 59.559 43.478 0.00 0.00 40.61 6.46
399 428 4.437794 CGAGGAAACTAATTTTAACCCGCC 60.438 45.833 0.00 0.00 44.43 6.13
400 429 4.154737 ACGAGGAAACTAATTTTAACCCGC 59.845 41.667 0.00 0.00 44.43 6.13
401 430 5.624292 CACGAGGAAACTAATTTTAACCCG 58.376 41.667 0.00 0.00 44.43 5.28
402 431 5.048573 TGCACGAGGAAACTAATTTTAACCC 60.049 40.000 0.00 0.00 44.43 4.11
403 432 6.004408 TGCACGAGGAAACTAATTTTAACC 57.996 37.500 0.00 0.00 44.43 2.85
404 433 5.567915 GCTGCACGAGGAAACTAATTTTAAC 59.432 40.000 0.00 0.00 44.43 2.01
405 434 5.472137 AGCTGCACGAGGAAACTAATTTTAA 59.528 36.000 1.02 0.00 44.43 1.52
406 435 5.001232 AGCTGCACGAGGAAACTAATTTTA 58.999 37.500 1.02 0.00 44.43 1.52
407 436 3.821033 AGCTGCACGAGGAAACTAATTTT 59.179 39.130 1.02 0.00 44.43 1.82
408 437 3.412386 AGCTGCACGAGGAAACTAATTT 58.588 40.909 1.02 0.00 44.43 1.82
409 438 3.059352 AGCTGCACGAGGAAACTAATT 57.941 42.857 1.02 0.00 44.43 1.40
410 439 2.770164 AGCTGCACGAGGAAACTAAT 57.230 45.000 1.02 0.00 44.43 1.73
411 440 2.561419 AGTAGCTGCACGAGGAAACTAA 59.439 45.455 4.12 0.00 44.43 2.24
412 441 2.168496 AGTAGCTGCACGAGGAAACTA 58.832 47.619 4.12 0.00 44.43 2.24
414 443 1.461127 CAAGTAGCTGCACGAGGAAAC 59.539 52.381 4.12 0.00 0.00 2.78
415 444 1.070134 ACAAGTAGCTGCACGAGGAAA 59.930 47.619 4.12 0.00 0.00 3.13
416 445 0.679505 ACAAGTAGCTGCACGAGGAA 59.320 50.000 4.12 0.00 0.00 3.36
417 446 1.541379 TACAAGTAGCTGCACGAGGA 58.459 50.000 4.12 0.00 0.00 3.71
418 447 2.196749 CATACAAGTAGCTGCACGAGG 58.803 52.381 4.12 0.00 0.00 4.63
419 448 1.590238 GCATACAAGTAGCTGCACGAG 59.410 52.381 4.12 0.00 34.77 4.18
420 449 1.640428 GCATACAAGTAGCTGCACGA 58.360 50.000 4.12 0.00 34.77 4.35
421 450 0.298707 CGCATACAAGTAGCTGCACG 59.701 55.000 4.12 0.00 34.29 5.34
422 451 0.652592 CCGCATACAAGTAGCTGCAC 59.347 55.000 4.12 0.00 34.29 4.57
423 452 0.461870 CCCGCATACAAGTAGCTGCA 60.462 55.000 4.12 0.00 34.29 4.41
424 453 0.462047 ACCCGCATACAAGTAGCTGC 60.462 55.000 0.00 0.00 0.00 5.25
425 454 2.864343 GTTACCCGCATACAAGTAGCTG 59.136 50.000 0.00 0.00 0.00 4.24
426 455 2.159000 GGTTACCCGCATACAAGTAGCT 60.159 50.000 0.00 0.00 0.00 3.32
427 456 2.207590 GGTTACCCGCATACAAGTAGC 58.792 52.381 0.00 0.00 0.00 3.58
428 457 3.530265 TGGTTACCCGCATACAAGTAG 57.470 47.619 0.00 0.00 0.00 2.57
429 458 3.977134 TTGGTTACCCGCATACAAGTA 57.023 42.857 0.00 0.00 0.00 2.24
430 459 2.815503 GTTTGGTTACCCGCATACAAGT 59.184 45.455 0.00 0.00 0.00 3.16
431 460 3.078837 AGTTTGGTTACCCGCATACAAG 58.921 45.455 0.00 0.00 0.00 3.16
432 461 3.143211 AGTTTGGTTACCCGCATACAA 57.857 42.857 0.00 0.00 0.00 2.41
433 462 2.863132 AGTTTGGTTACCCGCATACA 57.137 45.000 0.00 0.00 0.00 2.29
434 463 4.034742 CACATAGTTTGGTTACCCGCATAC 59.965 45.833 0.00 0.00 0.00 2.39
435 464 4.193090 CACATAGTTTGGTTACCCGCATA 58.807 43.478 0.00 0.00 0.00 3.14
436 465 3.013921 CACATAGTTTGGTTACCCGCAT 58.986 45.455 0.00 0.00 0.00 4.73
437 466 2.428491 CACATAGTTTGGTTACCCGCA 58.572 47.619 0.00 0.00 0.00 5.69
438 467 1.131693 GCACATAGTTTGGTTACCCGC 59.868 52.381 0.00 0.00 0.00 6.13
439 468 2.418628 CTGCACATAGTTTGGTTACCCG 59.581 50.000 0.00 0.00 0.00 5.28
440 469 3.439129 GTCTGCACATAGTTTGGTTACCC 59.561 47.826 0.00 0.00 0.00 3.69
441 470 3.124636 CGTCTGCACATAGTTTGGTTACC 59.875 47.826 0.00 0.00 0.00 2.85
442 471 3.991773 TCGTCTGCACATAGTTTGGTTAC 59.008 43.478 0.00 0.00 0.00 2.50
443 472 4.260139 TCGTCTGCACATAGTTTGGTTA 57.740 40.909 0.00 0.00 0.00 2.85
444 473 3.120321 TCGTCTGCACATAGTTTGGTT 57.880 42.857 0.00 0.00 0.00 3.67
445 474 2.831685 TCGTCTGCACATAGTTTGGT 57.168 45.000 0.00 0.00 0.00 3.67
446 475 2.352651 CCATCGTCTGCACATAGTTTGG 59.647 50.000 0.00 0.00 0.00 3.28
447 476 3.002791 ACCATCGTCTGCACATAGTTTG 58.997 45.455 0.00 0.00 0.00 2.93
448 477 3.334583 ACCATCGTCTGCACATAGTTT 57.665 42.857 0.00 0.00 0.00 2.66
449 478 3.334583 AACCATCGTCTGCACATAGTT 57.665 42.857 0.00 0.00 0.00 2.24
450 479 3.334583 AAACCATCGTCTGCACATAGT 57.665 42.857 0.00 0.00 0.00 2.12
451 480 6.646653 ACATATAAACCATCGTCTGCACATAG 59.353 38.462 0.00 0.00 0.00 2.23
452 481 6.521162 ACATATAAACCATCGTCTGCACATA 58.479 36.000 0.00 0.00 0.00 2.29
453 482 5.368145 ACATATAAACCATCGTCTGCACAT 58.632 37.500 0.00 0.00 0.00 3.21
454 483 4.765273 ACATATAAACCATCGTCTGCACA 58.235 39.130 0.00 0.00 0.00 4.57
455 484 5.734855 AACATATAAACCATCGTCTGCAC 57.265 39.130 0.00 0.00 0.00 4.57
456 485 6.751514 AAAACATATAAACCATCGTCTGCA 57.248 33.333 0.00 0.00 0.00 4.41
510 539 0.956410 TGGGCTGCATTGCATTTTGC 60.956 50.000 12.53 11.68 45.29 3.68
511 540 0.800012 GTGGGCTGCATTGCATTTTG 59.200 50.000 12.53 1.28 38.13 2.44
512 541 0.671163 CGTGGGCTGCATTGCATTTT 60.671 50.000 12.53 0.00 38.13 1.82
513 542 1.079681 CGTGGGCTGCATTGCATTT 60.080 52.632 12.53 0.00 38.13 2.32
514 543 2.574929 CGTGGGCTGCATTGCATT 59.425 55.556 12.53 0.00 38.13 3.56
515 544 4.137872 GCGTGGGCTGCATTGCAT 62.138 61.111 12.53 0.00 38.13 3.96
517 546 3.652539 ATTGCGTGGGCTGCATTGC 62.653 57.895 0.46 0.46 42.84 3.56
518 547 1.517694 GATTGCGTGGGCTGCATTG 60.518 57.895 0.50 0.00 42.84 2.82
519 548 1.534336 TTGATTGCGTGGGCTGCATT 61.534 50.000 0.50 0.00 42.84 3.56
520 549 1.534336 TTTGATTGCGTGGGCTGCAT 61.534 50.000 0.50 0.00 42.84 3.96
521 550 2.198969 TTTGATTGCGTGGGCTGCA 61.199 52.632 0.50 0.00 41.38 4.41
522 551 1.734117 GTTTGATTGCGTGGGCTGC 60.734 57.895 0.00 0.00 40.82 5.25
523 552 0.664166 GTGTTTGATTGCGTGGGCTG 60.664 55.000 0.00 0.00 40.82 4.85
524 553 1.659794 GTGTTTGATTGCGTGGGCT 59.340 52.632 0.00 0.00 40.82 5.19
525 554 1.729131 CGTGTTTGATTGCGTGGGC 60.729 57.895 0.00 0.00 40.52 5.36
526 555 0.385473 GACGTGTTTGATTGCGTGGG 60.385 55.000 0.00 0.00 37.71 4.61
527 556 0.385473 GGACGTGTTTGATTGCGTGG 60.385 55.000 0.00 0.00 37.71 4.94
528 557 0.586319 AGGACGTGTTTGATTGCGTG 59.414 50.000 0.00 0.00 37.71 5.34
529 558 2.066262 CTAGGACGTGTTTGATTGCGT 58.934 47.619 0.00 0.00 40.44 5.24
530 559 2.333926 TCTAGGACGTGTTTGATTGCG 58.666 47.619 0.00 0.00 0.00 4.85
531 560 3.994392 TCTTCTAGGACGTGTTTGATTGC 59.006 43.478 0.00 0.00 0.00 3.56
532 561 4.389077 GGTCTTCTAGGACGTGTTTGATTG 59.611 45.833 0.00 0.00 37.12 2.67
533 562 4.566987 GGTCTTCTAGGACGTGTTTGATT 58.433 43.478 0.00 0.00 37.12 2.57
534 563 3.367087 CGGTCTTCTAGGACGTGTTTGAT 60.367 47.826 0.00 0.00 37.12 2.57
535 564 2.030540 CGGTCTTCTAGGACGTGTTTGA 60.031 50.000 0.00 0.00 37.12 2.69
536 565 2.030540 TCGGTCTTCTAGGACGTGTTTG 60.031 50.000 0.00 0.00 37.12 2.93
537 566 2.233271 TCGGTCTTCTAGGACGTGTTT 58.767 47.619 0.00 0.00 37.12 2.83
538 567 1.901591 TCGGTCTTCTAGGACGTGTT 58.098 50.000 0.00 0.00 37.12 3.32
539 568 1.811359 CTTCGGTCTTCTAGGACGTGT 59.189 52.381 0.00 0.00 37.12 4.49
540 569 1.811359 ACTTCGGTCTTCTAGGACGTG 59.189 52.381 0.00 0.00 37.12 4.49
541 570 2.197283 ACTTCGGTCTTCTAGGACGT 57.803 50.000 0.00 0.00 37.12 4.34
542 571 4.410448 GTTTACTTCGGTCTTCTAGGACG 58.590 47.826 0.00 0.00 37.12 4.79
543 572 4.219288 TGGTTTACTTCGGTCTTCTAGGAC 59.781 45.833 0.00 0.00 35.66 3.85
544 573 4.410099 TGGTTTACTTCGGTCTTCTAGGA 58.590 43.478 0.00 0.00 0.00 2.94
545 574 4.796038 TGGTTTACTTCGGTCTTCTAGG 57.204 45.455 0.00 0.00 0.00 3.02
546 575 7.491696 CCTAAATGGTTTACTTCGGTCTTCTAG 59.508 40.741 0.00 0.00 0.00 2.43
547 576 7.325694 CCTAAATGGTTTACTTCGGTCTTCTA 58.674 38.462 0.00 0.00 0.00 2.10
548 577 6.171213 CCTAAATGGTTTACTTCGGTCTTCT 58.829 40.000 0.00 0.00 0.00 2.85
549 578 5.353400 CCCTAAATGGTTTACTTCGGTCTTC 59.647 44.000 0.00 0.00 0.00 2.87
556 585 6.371825 CAGAGTGACCCTAAATGGTTTACTTC 59.628 42.308 0.00 0.00 39.24 3.01
569 598 1.623811 GTTTCTGGCAGAGTGACCCTA 59.376 52.381 17.91 0.00 0.00 3.53
571 600 0.606673 GGTTTCTGGCAGAGTGACCC 60.607 60.000 24.69 15.58 0.00 4.46
573 602 0.108585 TGGGTTTCTGGCAGAGTGAC 59.891 55.000 17.91 16.31 0.00 3.67
574 603 0.108585 GTGGGTTTCTGGCAGAGTGA 59.891 55.000 17.91 5.29 0.00 3.41
575 604 0.179020 TGTGGGTTTCTGGCAGAGTG 60.179 55.000 17.91 0.00 0.00 3.51
576 605 0.109342 CTGTGGGTTTCTGGCAGAGT 59.891 55.000 17.91 0.00 0.00 3.24
577 606 1.239968 GCTGTGGGTTTCTGGCAGAG 61.240 60.000 17.91 4.54 0.00 3.35
578 607 1.228245 GCTGTGGGTTTCTGGCAGA 60.228 57.895 14.43 14.43 0.00 4.26
601 630 1.525077 CGTAGGCTCTCGCTCCTCT 60.525 63.158 0.00 0.00 36.09 3.69
602 631 0.532417 TACGTAGGCTCTCGCTCCTC 60.532 60.000 10.99 0.00 36.09 3.71
678 708 1.118838 CCCTCCTCTCCTGTGATGAC 58.881 60.000 0.00 0.00 0.00 3.06
1239 1517 1.377202 ACCGTAGCCGTCCTCGTAA 60.377 57.895 0.00 0.00 35.01 3.18
1356 1634 4.201851 ACGCACACAGAAGATAAATGATGC 60.202 41.667 0.00 0.00 0.00 3.91
1357 1635 5.292834 AGACGCACACAGAAGATAAATGATG 59.707 40.000 0.00 0.00 0.00 3.07
1358 1636 5.423015 AGACGCACACAGAAGATAAATGAT 58.577 37.500 0.00 0.00 0.00 2.45
1359 1637 4.820897 AGACGCACACAGAAGATAAATGA 58.179 39.130 0.00 0.00 0.00 2.57
1360 1638 4.259570 CGAGACGCACACAGAAGATAAATG 60.260 45.833 0.00 0.00 0.00 2.32
1361 1639 3.859961 CGAGACGCACACAGAAGATAAAT 59.140 43.478 0.00 0.00 0.00 1.40
1412 1697 1.687494 GACCTCGTCTGCACGCATTC 61.687 60.000 0.00 0.00 46.28 2.67
1624 1909 3.366883 CGGAAGAGAGAGAGAACAACAGG 60.367 52.174 0.00 0.00 0.00 4.00
1627 1912 3.926821 ACGGAAGAGAGAGAGAACAAC 57.073 47.619 0.00 0.00 0.00 3.32
1673 1994 2.275380 GGGCAAATTGACCTGCGGT 61.275 57.895 11.34 0.00 44.12 5.68
1798 2119 7.279536 ACTCTGTTTAACACATGCATCATAGAG 59.720 37.037 0.00 0.00 33.76 2.43
1799 2120 7.105588 ACTCTGTTTAACACATGCATCATAGA 58.894 34.615 0.00 0.00 33.76 1.98
1802 2123 6.579666 AACTCTGTTTAACACATGCATCAT 57.420 33.333 0.00 0.00 33.76 2.45
1816 2139 3.382546 GCCCATGCATCATAACTCTGTTT 59.617 43.478 0.00 0.00 37.47 2.83
1837 2162 2.280183 CGTGCTCTAAACTCGATCAAGC 59.720 50.000 0.00 0.00 0.00 4.01
1838 2163 2.280183 GCGTGCTCTAAACTCGATCAAG 59.720 50.000 0.00 0.00 0.00 3.02
1850 2175 2.995939 CAATTGAAGTCAGCGTGCTCTA 59.004 45.455 0.00 0.00 0.00 2.43
1857 2182 4.161333 GACCAATTCAATTGAAGTCAGCG 58.839 43.478 24.17 11.00 42.83 5.18
1886 2211 9.461312 TCATTGGTGCTTTATACAAAGAAGTAT 57.539 29.630 0.00 0.00 43.32 2.12
1894 2220 7.117523 GCAAAACATCATTGGTGCTTTATACAA 59.882 33.333 0.00 0.00 0.00 2.41
1896 2222 6.813152 AGCAAAACATCATTGGTGCTTTATAC 59.187 34.615 0.00 0.00 36.67 1.47
1898 2224 5.640357 CAGCAAAACATCATTGGTGCTTTAT 59.360 36.000 5.64 0.00 45.65 1.40
1920 2247 2.288729 CCATATCGACCACATTGTGCAG 59.711 50.000 11.41 4.89 31.34 4.41
1923 2250 6.429791 TTTTACCATATCGACCACATTGTG 57.570 37.500 9.92 9.92 0.00 3.33
1967 2294 3.069872 TGAAACTAGTAACAGCCAACGGA 59.930 43.478 0.00 0.00 0.00 4.69
1979 2306 6.262944 TCGGTTGTCACTACTTGAAACTAGTA 59.737 38.462 0.00 0.00 35.39 1.82
1980 2307 5.068198 TCGGTTGTCACTACTTGAAACTAGT 59.932 40.000 0.00 0.00 35.39 2.57
1981 2308 5.526115 TCGGTTGTCACTACTTGAAACTAG 58.474 41.667 0.00 0.00 35.39 2.57
2003 2330 4.498682 GCCTATGTGGAATGCAAGTTCATC 60.499 45.833 0.00 0.00 38.35 2.92
2021 2348 4.406972 TGAACTGCAGATAGACAAGCCTAT 59.593 41.667 23.35 0.00 32.39 2.57
2037 2364 5.946298 TCAATTGAATGAGACATGAACTGC 58.054 37.500 5.45 0.00 0.00 4.40
2123 2450 7.894753 TCAACCCAATATGAGCATTCAATTA 57.105 32.000 0.00 0.00 36.78 1.40
2133 2460 8.036575 ACACAATTTTGATCAACCCAATATGAG 58.963 33.333 7.89 7.99 0.00 2.90
2214 2546 5.125097 CCTACGTGTATGAACAGAACTAGGT 59.875 44.000 0.00 0.00 35.91 3.08
2368 2705 5.078411 AGAATCACTATATAAGGCAGCCG 57.922 43.478 5.55 0.00 0.00 5.52
2641 2979 1.034356 TTTCCGAGAAGTGTCCGACA 58.966 50.000 0.00 0.00 0.00 4.35
2654 2992 5.404466 TTCCTAGTAAAATCCGTTTCCGA 57.596 39.130 0.00 0.00 35.63 4.55
2740 3078 4.837860 AGGGAATGCAATACAACAAAAGGA 59.162 37.500 0.00 0.00 0.00 3.36
2932 3271 5.243730 CACAATACCCAGTCCAAACAAGATT 59.756 40.000 0.00 0.00 0.00 2.40
2935 3274 4.023193 GTCACAATACCCAGTCCAAACAAG 60.023 45.833 0.00 0.00 0.00 3.16
2955 3294 3.358111 TTTCACCCACTTTCACTGTCA 57.642 42.857 0.00 0.00 0.00 3.58
2964 3303 5.374071 CAACTACCTACTTTTCACCCACTT 58.626 41.667 0.00 0.00 0.00 3.16
2982 3321 0.759959 TGAAGTTGGACGGGCAACTA 59.240 50.000 0.00 0.00 40.35 2.24
3002 3341 4.227300 AGCAACCTGTGAATATCTGGGTAA 59.773 41.667 0.00 0.00 0.00 2.85
3017 3356 1.909700 TTAGCCAAGGAAGCAACCTG 58.090 50.000 2.54 0.00 40.49 4.00
3132 3471 5.317733 ACATCTTCTACTTTCCTCTCACG 57.682 43.478 0.00 0.00 0.00 4.35
3134 3473 6.918067 TCAACATCTTCTACTTTCCTCTCA 57.082 37.500 0.00 0.00 0.00 3.27
3159 3498 0.682532 TCACTGCCACAAACTGCCAA 60.683 50.000 0.00 0.00 0.00 4.52
3169 3508 7.832503 AAAATTATTAGCATTTCACTGCCAC 57.167 32.000 0.00 0.00 43.33 5.01
3180 3519 7.871853 ACTCGCGGATTAAAAATTATTAGCAT 58.128 30.769 6.13 0.00 0.00 3.79
3253 3593 5.479375 CCTTACAGTCAACTAACCCACTCTA 59.521 44.000 0.00 0.00 0.00 2.43
3409 3749 2.715763 TTGGGAACAGAGGGAGTACT 57.284 50.000 0.00 0.00 44.54 2.73
3411 3751 6.011981 ACAAATATTTGGGAACAGAGGGAGTA 60.012 38.462 27.43 0.00 44.54 2.59
3413 3753 5.264395 ACAAATATTTGGGAACAGAGGGAG 58.736 41.667 27.43 2.64 44.54 4.30
3414 3754 5.015178 AGACAAATATTTGGGAACAGAGGGA 59.985 40.000 27.43 0.00 44.54 4.20
3415 3755 5.264395 AGACAAATATTTGGGAACAGAGGG 58.736 41.667 27.43 3.22 44.54 4.30
3416 3756 6.840780 AAGACAAATATTTGGGAACAGAGG 57.159 37.500 27.43 3.68 44.54 3.69
3417 3757 8.115490 AGAAAGACAAATATTTGGGAACAGAG 57.885 34.615 27.43 4.34 44.54 3.35
3418 3758 9.231297 CTAGAAAGACAAATATTTGGGAACAGA 57.769 33.333 27.43 10.48 44.54 3.41
3419 3759 9.231297 TCTAGAAAGACAAATATTTGGGAACAG 57.769 33.333 27.43 16.30 44.54 3.16
3420 3760 9.753674 ATCTAGAAAGACAAATATTTGGGAACA 57.246 29.630 27.43 9.20 42.34 3.18
3434 3774 9.958180 TGTCCATTTGAAATATCTAGAAAGACA 57.042 29.630 0.00 0.00 33.57 3.41
3440 3780 9.513906 TGTTGTTGTCCATTTGAAATATCTAGA 57.486 29.630 0.00 0.00 0.00 2.43
3444 3784 9.009327 CGTATGTTGTTGTCCATTTGAAATATC 57.991 33.333 0.00 0.00 0.00 1.63
3445 3785 7.973388 CCGTATGTTGTTGTCCATTTGAAATAT 59.027 33.333 0.00 0.00 0.00 1.28
3446 3786 7.175119 TCCGTATGTTGTTGTCCATTTGAAATA 59.825 33.333 0.00 0.00 0.00 1.40
3447 3787 6.015856 TCCGTATGTTGTTGTCCATTTGAAAT 60.016 34.615 0.00 0.00 0.00 2.17
3448 3788 5.299531 TCCGTATGTTGTTGTCCATTTGAAA 59.700 36.000 0.00 0.00 0.00 2.69
3449 3789 4.822350 TCCGTATGTTGTTGTCCATTTGAA 59.178 37.500 0.00 0.00 0.00 2.69
3450 3790 4.390264 TCCGTATGTTGTTGTCCATTTGA 58.610 39.130 0.00 0.00 0.00 2.69
3451 3791 4.757799 TCCGTATGTTGTTGTCCATTTG 57.242 40.909 0.00 0.00 0.00 2.32
3452 3792 4.764823 ACATCCGTATGTTGTTGTCCATTT 59.235 37.500 0.00 0.00 44.07 2.32
3453 3793 4.331968 ACATCCGTATGTTGTTGTCCATT 58.668 39.130 0.00 0.00 44.07 3.16
3454 3794 3.950397 ACATCCGTATGTTGTTGTCCAT 58.050 40.909 0.00 0.00 44.07 3.41
3455 3795 3.410631 ACATCCGTATGTTGTTGTCCA 57.589 42.857 0.00 0.00 44.07 4.02
3456 3796 5.403897 CATACATCCGTATGTTGTTGTCC 57.596 43.478 0.00 0.00 46.70 4.02
3494 3834 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
3495 3835 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
3496 3836 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
3497 3837 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
3498 3838 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
3499 3839 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
3500 3840 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
3501 3841 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
3502 3842 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
3503 3843 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
3504 3844 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
3505 3845 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
3506 3846 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
3507 3847 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
3508 3848 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
3509 3849 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
3510 3850 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
3511 3851 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
3512 3852 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
3513 3853 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
3514 3854 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
3515 3855 7.654116 TGATTTCAACAAGTGACTACATACGAA 59.346 33.333 0.00 0.00 35.39 3.85
3516 3856 7.115805 GTGATTTCAACAAGTGACTACATACGA 59.884 37.037 0.00 0.00 35.39 3.43
3517 3857 7.116376 AGTGATTTCAACAAGTGACTACATACG 59.884 37.037 0.00 0.00 35.39 3.06
3518 3858 8.311650 AGTGATTTCAACAAGTGACTACATAC 57.688 34.615 0.00 0.00 35.39 2.39
3519 3859 9.639601 CTAGTGATTTCAACAAGTGACTACATA 57.360 33.333 0.00 0.00 35.39 2.29
3520 3860 8.367911 TCTAGTGATTTCAACAAGTGACTACAT 58.632 33.333 0.00 0.00 35.39 2.29
3521 3861 7.722363 TCTAGTGATTTCAACAAGTGACTACA 58.278 34.615 0.00 0.00 35.39 2.74
3522 3862 8.589335 TTCTAGTGATTTCAACAAGTGACTAC 57.411 34.615 0.00 0.00 35.39 2.73
3523 3863 9.261180 CTTTCTAGTGATTTCAACAAGTGACTA 57.739 33.333 0.00 0.00 35.39 2.59
3524 3864 7.987458 TCTTTCTAGTGATTTCAACAAGTGACT 59.013 33.333 0.00 0.00 35.39 3.41
3525 3865 8.064814 GTCTTTCTAGTGATTTCAACAAGTGAC 58.935 37.037 0.00 0.00 35.39 3.67
3526 3866 7.768582 TGTCTTTCTAGTGATTTCAACAAGTGA 59.231 33.333 0.00 0.00 0.00 3.41
3527 3867 7.919690 TGTCTTTCTAGTGATTTCAACAAGTG 58.080 34.615 0.00 0.00 0.00 3.16
3528 3868 8.506168 TTGTCTTTCTAGTGATTTCAACAAGT 57.494 30.769 0.00 0.00 0.00 3.16
3529 3869 9.443283 CTTTGTCTTTCTAGTGATTTCAACAAG 57.557 33.333 0.00 0.00 0.00 3.16
3530 3870 9.173021 TCTTTGTCTTTCTAGTGATTTCAACAA 57.827 29.630 0.00 0.00 0.00 2.83
3531 3871 8.731275 TCTTTGTCTTTCTAGTGATTTCAACA 57.269 30.769 0.00 0.00 0.00 3.33
3539 3879 9.490379 GTTCCTAAATCTTTGTCTTTCTAGTGA 57.510 33.333 0.00 0.00 0.00 3.41
3540 3880 8.436200 CGTTCCTAAATCTTTGTCTTTCTAGTG 58.564 37.037 0.00 0.00 0.00 2.74
3541 3881 7.603024 CCGTTCCTAAATCTTTGTCTTTCTAGT 59.397 37.037 0.00 0.00 0.00 2.57
3542 3882 7.817962 TCCGTTCCTAAATCTTTGTCTTTCTAG 59.182 37.037 0.00 0.00 0.00 2.43
3543 3883 7.673180 TCCGTTCCTAAATCTTTGTCTTTCTA 58.327 34.615 0.00 0.00 0.00 2.10
3544 3884 6.531021 TCCGTTCCTAAATCTTTGTCTTTCT 58.469 36.000 0.00 0.00 0.00 2.52
3545 3885 6.128254 CCTCCGTTCCTAAATCTTTGTCTTTC 60.128 42.308 0.00 0.00 0.00 2.62
3546 3886 5.705905 CCTCCGTTCCTAAATCTTTGTCTTT 59.294 40.000 0.00 0.00 0.00 2.52
3547 3887 5.246307 CCTCCGTTCCTAAATCTTTGTCTT 58.754 41.667 0.00 0.00 0.00 3.01
3548 3888 4.323562 CCCTCCGTTCCTAAATCTTTGTCT 60.324 45.833 0.00 0.00 0.00 3.41
3549 3889 3.939592 CCCTCCGTTCCTAAATCTTTGTC 59.060 47.826 0.00 0.00 0.00 3.18
3550 3890 3.585732 TCCCTCCGTTCCTAAATCTTTGT 59.414 43.478 0.00 0.00 0.00 2.83
3551 3891 4.192317 CTCCCTCCGTTCCTAAATCTTTG 58.808 47.826 0.00 0.00 0.00 2.77
3552 3892 3.844804 ACTCCCTCCGTTCCTAAATCTTT 59.155 43.478 0.00 0.00 0.00 2.52
3553 3893 3.451890 ACTCCCTCCGTTCCTAAATCTT 58.548 45.455 0.00 0.00 0.00 2.40
3554 3894 3.117552 ACTCCCTCCGTTCCTAAATCT 57.882 47.619 0.00 0.00 0.00 2.40
3555 3895 5.349061 TTTACTCCCTCCGTTCCTAAATC 57.651 43.478 0.00 0.00 0.00 2.17
3556 3896 5.970501 ATTTACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
3557 3897 5.364735 CCTATTTACTCCCTCCGTTCCTAAA 59.635 44.000 0.00 0.00 0.00 1.85
3558 3898 4.897670 CCTATTTACTCCCTCCGTTCCTAA 59.102 45.833 0.00 0.00 0.00 2.69
3559 3899 4.078980 ACCTATTTACTCCCTCCGTTCCTA 60.079 45.833 0.00 0.00 0.00 2.94
3560 3900 3.306613 CCTATTTACTCCCTCCGTTCCT 58.693 50.000 0.00 0.00 0.00 3.36
3561 3901 3.036819 ACCTATTTACTCCCTCCGTTCC 58.963 50.000 0.00 0.00 0.00 3.62
3562 3902 4.261952 GCTACCTATTTACTCCCTCCGTTC 60.262 50.000 0.00 0.00 0.00 3.95
3563 3903 3.640498 GCTACCTATTTACTCCCTCCGTT 59.360 47.826 0.00 0.00 0.00 4.44
3564 3904 3.229293 GCTACCTATTTACTCCCTCCGT 58.771 50.000 0.00 0.00 0.00 4.69
3565 3905 3.228453 TGCTACCTATTTACTCCCTCCG 58.772 50.000 0.00 0.00 0.00 4.63
3566 3906 5.827326 AATGCTACCTATTTACTCCCTCC 57.173 43.478 0.00 0.00 0.00 4.30
3567 3907 7.068686 AGAAATGCTACCTATTTACTCCCTC 57.931 40.000 0.00 0.00 0.00 4.30
3568 3908 7.348537 AGAAGAAATGCTACCTATTTACTCCCT 59.651 37.037 0.00 0.00 0.00 4.20
3569 3909 7.510407 AGAAGAAATGCTACCTATTTACTCCC 58.490 38.462 0.00 0.00 0.00 4.30
3570 3910 8.831550 CAAGAAGAAATGCTACCTATTTACTCC 58.168 37.037 0.00 0.00 0.00 3.85
3571 3911 9.601217 TCAAGAAGAAATGCTACCTATTTACTC 57.399 33.333 0.00 0.00 0.00 2.59
3627 3967 5.052481 GCAGTGTATCATGATAGTCTTGCA 58.948 41.667 23.20 13.48 0.00 4.08
3686 4026 7.857734 TCAGTGTCAACAACTTTTATCAAGA 57.142 32.000 0.00 0.00 0.00 3.02
3694 4034 9.071276 AGATCATTTATCAGTGTCAACAACTTT 57.929 29.630 0.00 0.00 37.03 2.66
3754 4095 4.060205 CAGATGGATGTCGCAATATCACA 58.940 43.478 0.00 0.00 0.00 3.58
3927 4269 7.282916 CAAAAATAAAAATTGACTGGCACGAG 58.717 34.615 0.00 0.00 0.00 4.18
3930 4272 7.258022 ACCAAAAATAAAAATTGACTGGCAC 57.742 32.000 0.00 0.00 0.00 5.01
3938 4280 8.193438 TGAAGGCCAAACCAAAAATAAAAATTG 58.807 29.630 5.01 0.00 43.14 2.32
3941 4283 7.703058 TTGAAGGCCAAACCAAAAATAAAAA 57.297 28.000 5.01 0.00 43.14 1.94
3942 4284 7.340487 ACATTGAAGGCCAAACCAAAAATAAAA 59.660 29.630 5.01 0.00 43.14 1.52
3943 4285 6.830838 ACATTGAAGGCCAAACCAAAAATAAA 59.169 30.769 5.01 0.00 43.14 1.40
3944 4286 6.360618 ACATTGAAGGCCAAACCAAAAATAA 58.639 32.000 5.01 0.00 43.14 1.40
3945 4287 5.934781 ACATTGAAGGCCAAACCAAAAATA 58.065 33.333 5.01 0.00 43.14 1.40
3947 4289 4.227864 ACATTGAAGGCCAAACCAAAAA 57.772 36.364 5.01 0.00 43.14 1.94
3948 4290 3.922171 ACATTGAAGGCCAAACCAAAA 57.078 38.095 5.01 0.00 43.14 2.44
3949 4291 6.672266 TTATACATTGAAGGCCAAACCAAA 57.328 33.333 5.01 0.00 43.14 3.28
3982 4324 3.384467 ACCAAATTCCTGTGACCAGTTTG 59.616 43.478 0.00 0.00 36.95 2.93
4056 4398 4.331108 TCATACTATGTTGCTGCCACAAA 58.669 39.130 10.76 0.00 0.00 2.83
4236 4579 9.905713 AATGTCATAGGCTCTAAAAACATCTTA 57.094 29.630 0.00 0.00 0.00 2.10
4241 4584 6.939730 TGACAATGTCATAGGCTCTAAAAACA 59.060 34.615 12.63 0.00 37.67 2.83
4308 4652 7.390440 CACCACTCTCCATTGACAGTATAAAAA 59.610 37.037 0.00 0.00 0.00 1.94
4670 5016 8.184192 CCATAGTCGAGCATTTCTTTTATGTTT 58.816 33.333 0.00 0.00 0.00 2.83
4700 5046 5.650703 TGGTGACATCTAGTTAGACGAATCA 59.349 40.000 0.00 0.00 34.72 2.57
4728 5074 2.754552 TGCCTGATGACTTAATTGGTGC 59.245 45.455 0.00 0.00 0.00 5.01
4729 5075 5.587388 AATGCCTGATGACTTAATTGGTG 57.413 39.130 0.00 0.00 0.00 4.17
4730 5076 5.625197 GCAAATGCCTGATGACTTAATTGGT 60.625 40.000 0.00 0.00 34.31 3.67
4776 5122 7.936847 GTGTGTATTTATCACAAGGGATGGATA 59.063 37.037 0.35 0.00 45.36 2.59
4803 5149 0.944311 CCCCACAGTCGTGTTTCTCG 60.944 60.000 0.00 0.00 41.93 4.04
4880 5226 1.142870 TCAGGGCACTGTTTAACTGCT 59.857 47.619 17.28 0.00 45.14 4.24
4910 5256 0.956902 AACGACCAACAATACCGCCC 60.957 55.000 0.00 0.00 0.00 6.13
4911 5257 0.876399 AAACGACCAACAATACCGCC 59.124 50.000 0.00 0.00 0.00 6.13
4943 5289 7.104043 ACATCTGTAAGTGCATGCATAATTT 57.896 32.000 25.64 17.32 33.76 1.82
5061 5407 1.388547 TCAAGAACCGCAGCAACTTT 58.611 45.000 0.00 0.00 0.00 2.66
5132 5478 9.601217 ACATAGCGAAGACTACTCATTTTATTT 57.399 29.630 0.00 0.00 0.00 1.40
5133 5479 9.035607 CACATAGCGAAGACTACTCATTTTATT 57.964 33.333 0.00 0.00 0.00 1.40
5135 5481 7.768240 TCACATAGCGAAGACTACTCATTTTA 58.232 34.615 0.00 0.00 0.00 1.52
5159 5505 9.877137 CCCAAGTTTGCTGTTAAAATAAAATTC 57.123 29.630 0.00 0.00 0.00 2.17
5180 5526 4.891756 ACTAGGCAAATGATTGATCCCAAG 59.108 41.667 0.00 0.00 38.94 3.61
5212 5558 6.493166 TCATACAATCCACAGGAGGAAAAAT 58.507 36.000 0.00 0.00 41.92 1.82
5213 5559 5.886609 TCATACAATCCACAGGAGGAAAAA 58.113 37.500 0.00 0.00 41.92 1.94
5232 5578 2.946990 TCAGACGCGATACAACCTCATA 59.053 45.455 15.93 0.00 0.00 2.15
5233 5579 1.749063 TCAGACGCGATACAACCTCAT 59.251 47.619 15.93 0.00 0.00 2.90
5234 5580 1.170442 TCAGACGCGATACAACCTCA 58.830 50.000 15.93 0.00 0.00 3.86
5242 5588 0.899720 AAGGGGTTTCAGACGCGATA 59.100 50.000 15.93 0.00 41.82 2.92
5243 5589 0.036306 AAAGGGGTTTCAGACGCGAT 59.964 50.000 15.93 0.00 41.82 4.58
5244 5590 0.179040 AAAAGGGGTTTCAGACGCGA 60.179 50.000 15.93 0.00 41.82 5.87
5245 5591 0.666374 AAAAAGGGGTTTCAGACGCG 59.334 50.000 3.53 3.53 41.82 6.01
5263 5609 8.047413 GGTTTCAGACCCGATATTTCTAAAAA 57.953 34.615 0.00 0.00 43.06 1.94
5264 5610 7.619964 GGTTTCAGACCCGATATTTCTAAAA 57.380 36.000 0.00 0.00 43.06 1.52
5311 5657 3.822735 CCATTCAGTCTGCAGGAGAAAAA 59.177 43.478 15.13 1.91 30.26 1.94
5324 5670 0.736325 CGACACGACCCCATTCAGTC 60.736 60.000 0.00 0.00 0.00 3.51
5333 5679 4.065281 CCCTCCACGACACGACCC 62.065 72.222 0.00 0.00 0.00 4.46
5340 5686 1.519455 CGAAGCATCCCTCCACGAC 60.519 63.158 0.00 0.00 0.00 4.34
5342 5688 1.672854 TACCGAAGCATCCCTCCACG 61.673 60.000 0.00 0.00 0.00 4.94
5344 5690 1.281419 TTTACCGAAGCATCCCTCCA 58.719 50.000 0.00 0.00 0.00 3.86
5346 5692 2.033424 GCATTTTACCGAAGCATCCCTC 59.967 50.000 0.00 0.00 0.00 4.30
5347 5693 2.024414 GCATTTTACCGAAGCATCCCT 58.976 47.619 0.00 0.00 0.00 4.20
5353 5711 1.810151 TCACTGGCATTTTACCGAAGC 59.190 47.619 0.00 0.00 0.00 3.86
5357 5715 0.179200 GCGTCACTGGCATTTTACCG 60.179 55.000 0.00 0.00 0.00 4.02
5368 5726 5.276395 CCTTCTGATAAATTACGCGTCACTG 60.276 44.000 18.63 5.05 0.00 3.66
5376 5734 5.116180 TGCTGGACCTTCTGATAAATTACG 58.884 41.667 0.00 0.00 0.00 3.18
5377 5735 6.037610 CACTGCTGGACCTTCTGATAAATTAC 59.962 42.308 0.00 0.00 0.00 1.89
5378 5736 6.070251 TCACTGCTGGACCTTCTGATAAATTA 60.070 38.462 0.00 0.00 0.00 1.40
5380 5738 4.225942 TCACTGCTGGACCTTCTGATAAAT 59.774 41.667 0.00 0.00 0.00 1.40
5383 5741 2.497675 GTCACTGCTGGACCTTCTGATA 59.502 50.000 0.00 0.00 0.00 2.15
5422 6162 9.393512 ACTACTCACTACACTAATAACCTGTAG 57.606 37.037 0.00 0.00 42.08 2.74
5427 6167 9.054922 CCTAGACTACTCACTACACTAATAACC 57.945 40.741 0.00 0.00 0.00 2.85
5463 6205 7.750229 TTCAAAGAGGCCATCATACATAATC 57.250 36.000 5.01 0.00 0.00 1.75
5473 6215 5.649782 TCTTTTGATTCAAAGAGGCCATC 57.350 39.130 5.01 0.00 34.72 3.51
5586 6328 9.627123 CATCAGGAAAAGTTTCTATGGGTATAA 57.373 33.333 3.92 0.00 37.35 0.98
5645 6387 8.082242 CCCAAGAAGTTCGAGTCAATTAAAAAT 58.918 33.333 0.00 0.00 0.00 1.82
5660 6402 5.012893 ACAAAGGATGATCCCAAGAAGTTC 58.987 41.667 8.08 0.00 37.19 3.01
5690 6432 5.005971 CCCAAATGATTGAATTTGCATCGTC 59.994 40.000 4.49 0.00 43.29 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.