Multiple sequence alignment - TraesCS1B01G249600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G249600 chr1B 100.000 4802 0 0 1 4802 442001325 441996524 0.000000e+00 8868.0
1 TraesCS1B01G249600 chr1B 95.290 276 12 1 3205 3480 6583195 6583469 2.050000e-118 436.0
2 TraesCS1B01G249600 chr1B 94.643 280 14 1 3203 3482 62791773 62792051 2.650000e-117 433.0
3 TraesCS1B01G249600 chr1B 90.722 97 9 0 824 920 534305890 534305986 3.900000e-26 130.0
4 TraesCS1B01G249600 chr1D 92.137 2073 106 34 1076 3135 327723139 327721111 0.000000e+00 2872.0
5 TraesCS1B01G249600 chr1D 91.096 146 9 3 829 972 327723414 327723271 1.360000e-45 195.0
6 TraesCS1B01G249600 chr2B 99.349 1075 5 2 3728 4802 31594430 31593358 0.000000e+00 1945.0
7 TraesCS1B01G249600 chr2B 88.462 832 84 8 1 823 56191882 56192710 0.000000e+00 994.0
8 TraesCS1B01G249600 chr2B 87.908 827 91 8 1 823 254343859 254344680 0.000000e+00 965.0
9 TraesCS1B01G249600 chr2B 95.652 276 11 1 3205 3480 9845424 9845150 4.410000e-120 442.0
10 TraesCS1B01G249600 chr2B 81.707 82 15 0 3542 3623 24263155 24263074 8.620000e-08 69.4
11 TraesCS1B01G249600 chr7A 99.252 1070 7 1 3733 4802 681575363 681576431 0.000000e+00 1930.0
12 TraesCS1B01G249600 chr7A 98.886 1077 10 2 3727 4802 660472561 660471486 0.000000e+00 1921.0
13 TraesCS1B01G249600 chr7A 98.884 1075 10 2 3728 4802 691153831 691154903 0.000000e+00 1917.0
14 TraesCS1B01G249600 chr7A 98.512 1075 15 1 3728 4802 721562749 721563822 0.000000e+00 1895.0
15 TraesCS1B01G249600 chr6B 98.696 1074 12 2 3730 4802 586525972 586524900 0.000000e+00 1905.0
16 TraesCS1B01G249600 chr6B 96.127 284 10 1 3203 3486 171711427 171711709 3.390000e-126 462.0
17 TraesCS1B01G249600 chr6B 95.652 276 11 1 3205 3480 3661770 3662044 4.410000e-120 442.0
18 TraesCS1B01G249600 chr4B 98.419 1075 14 3 3728 4802 30854627 30855698 0.000000e+00 1888.0
19 TraesCS1B01G249600 chr4B 79.412 102 21 0 3518 3619 516473186 516473287 6.670000e-09 73.1
20 TraesCS1B01G249600 chr2A 98.410 1069 16 1 3733 4801 117170861 117171928 0.000000e+00 1879.0
21 TraesCS1B01G249600 chr3B 97.953 1075 12 4 3728 4802 762628846 762629910 0.000000e+00 1855.0
22 TraesCS1B01G249600 chr3B 88.443 1021 77 24 2133 3136 73849454 73850450 0.000000e+00 1194.0
23 TraesCS1B01G249600 chr3B 88.221 798 80 10 2 789 309383989 309384782 0.000000e+00 941.0
24 TraesCS1B01G249600 chr3B 86.538 832 101 7 1 823 390231694 390230865 0.000000e+00 905.0
25 TraesCS1B01G249600 chr3B 90.796 402 26 7 1720 2117 73843408 73843802 1.180000e-145 527.0
26 TraesCS1B01G249600 chr3B 96.377 276 9 1 3205 3480 463107575 463107301 2.040000e-123 453.0
27 TraesCS1B01G249600 chr3B 95.730 281 11 1 3203 3483 401309145 401309424 7.330000e-123 451.0
28 TraesCS1B01G249600 chr3B 82.317 164 15 8 824 973 279702336 279702173 3.900000e-26 130.0
29 TraesCS1B01G249600 chr3A 97.955 1076 7 7 3727 4802 20028239 20027179 0.000000e+00 1851.0
30 TraesCS1B01G249600 chr3A 89.293 1018 75 20 2133 3134 59434423 59435422 0.000000e+00 1245.0
31 TraesCS1B01G249600 chr3A 91.008 367 27 3 1721 2086 59425517 59425878 1.550000e-134 490.0
32 TraesCS1B01G249600 chr1A 93.525 1081 56 5 2102 3175 408492523 408493596 0.000000e+00 1596.0
33 TraesCS1B01G249600 chr1A 89.381 1130 72 11 977 2088 408491207 408492306 0.000000e+00 1378.0
34 TraesCS1B01G249600 chr3D 89.892 1019 76 10 2133 3136 47348273 47349279 0.000000e+00 1286.0
35 TraesCS1B01G249600 chr3D 86.962 836 87 16 2 827 108914194 108915017 0.000000e+00 920.0
36 TraesCS1B01G249600 chr3D 90.932 397 29 4 1722 2117 47341571 47341961 1.180000e-145 527.0
37 TraesCS1B01G249600 chr5B 89.801 804 74 6 26 823 526228125 526228926 0.000000e+00 1024.0
38 TraesCS1B01G249600 chr5B 87.875 833 80 13 1 825 665956792 665957611 0.000000e+00 959.0
39 TraesCS1B01G249600 chr5B 91.837 98 8 0 824 921 172638936 172639033 2.330000e-28 137.0
40 TraesCS1B01G249600 chr4A 88.499 826 86 7 3 823 732979167 732979988 0.000000e+00 990.0
41 TraesCS1B01G249600 chr4A 94.662 281 14 1 3202 3482 730412077 730412356 7.380000e-118 435.0
42 TraesCS1B01G249600 chr4A 89.796 98 10 0 824 921 16872970 16872873 5.050000e-25 126.0
43 TraesCS1B01G249600 chr7B 88.327 831 87 8 1 823 687548389 687549217 0.000000e+00 989.0
44 TraesCS1B01G249600 chr7B 90.722 97 9 0 824 920 692710783 692710687 3.900000e-26 130.0
45 TraesCS1B01G249600 chr7B 89.796 98 10 0 824 921 22841253 22841350 5.050000e-25 126.0
46 TraesCS1B01G249600 chrUn 94.624 279 14 1 3202 3480 35834596 35834873 9.550000e-117 431.0
47 TraesCS1B01G249600 chrUn 89.796 98 10 0 824 921 38407390 38407293 5.050000e-25 126.0
48 TraesCS1B01G249600 chr6A 89.796 98 10 0 824 921 353251475 353251572 5.050000e-25 126.0
49 TraesCS1B01G249600 chr5A 91.111 45 4 0 3576 3620 535881599 535881643 1.440000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G249600 chr1B 441996524 442001325 4801 True 8868.0 8868 100.0000 1 4802 1 chr1B.!!$R1 4801
1 TraesCS1B01G249600 chr1D 327721111 327723414 2303 True 1533.5 2872 91.6165 829 3135 2 chr1D.!!$R1 2306
2 TraesCS1B01G249600 chr2B 31593358 31594430 1072 True 1945.0 1945 99.3490 3728 4802 1 chr2B.!!$R3 1074
3 TraesCS1B01G249600 chr2B 56191882 56192710 828 False 994.0 994 88.4620 1 823 1 chr2B.!!$F1 822
4 TraesCS1B01G249600 chr2B 254343859 254344680 821 False 965.0 965 87.9080 1 823 1 chr2B.!!$F2 822
5 TraesCS1B01G249600 chr7A 681575363 681576431 1068 False 1930.0 1930 99.2520 3733 4802 1 chr7A.!!$F1 1069
6 TraesCS1B01G249600 chr7A 660471486 660472561 1075 True 1921.0 1921 98.8860 3727 4802 1 chr7A.!!$R1 1075
7 TraesCS1B01G249600 chr7A 691153831 691154903 1072 False 1917.0 1917 98.8840 3728 4802 1 chr7A.!!$F2 1074
8 TraesCS1B01G249600 chr7A 721562749 721563822 1073 False 1895.0 1895 98.5120 3728 4802 1 chr7A.!!$F3 1074
9 TraesCS1B01G249600 chr6B 586524900 586525972 1072 True 1905.0 1905 98.6960 3730 4802 1 chr6B.!!$R1 1072
10 TraesCS1B01G249600 chr4B 30854627 30855698 1071 False 1888.0 1888 98.4190 3728 4802 1 chr4B.!!$F1 1074
11 TraesCS1B01G249600 chr2A 117170861 117171928 1067 False 1879.0 1879 98.4100 3733 4801 1 chr2A.!!$F1 1068
12 TraesCS1B01G249600 chr3B 762628846 762629910 1064 False 1855.0 1855 97.9530 3728 4802 1 chr3B.!!$F5 1074
13 TraesCS1B01G249600 chr3B 73849454 73850450 996 False 1194.0 1194 88.4430 2133 3136 1 chr3B.!!$F2 1003
14 TraesCS1B01G249600 chr3B 309383989 309384782 793 False 941.0 941 88.2210 2 789 1 chr3B.!!$F3 787
15 TraesCS1B01G249600 chr3B 390230865 390231694 829 True 905.0 905 86.5380 1 823 1 chr3B.!!$R2 822
16 TraesCS1B01G249600 chr3A 20027179 20028239 1060 True 1851.0 1851 97.9550 3727 4802 1 chr3A.!!$R1 1075
17 TraesCS1B01G249600 chr3A 59434423 59435422 999 False 1245.0 1245 89.2930 2133 3134 1 chr3A.!!$F2 1001
18 TraesCS1B01G249600 chr1A 408491207 408493596 2389 False 1487.0 1596 91.4530 977 3175 2 chr1A.!!$F1 2198
19 TraesCS1B01G249600 chr3D 47348273 47349279 1006 False 1286.0 1286 89.8920 2133 3136 1 chr3D.!!$F2 1003
20 TraesCS1B01G249600 chr3D 108914194 108915017 823 False 920.0 920 86.9620 2 827 1 chr3D.!!$F3 825
21 TraesCS1B01G249600 chr5B 526228125 526228926 801 False 1024.0 1024 89.8010 26 823 1 chr5B.!!$F2 797
22 TraesCS1B01G249600 chr5B 665956792 665957611 819 False 959.0 959 87.8750 1 825 1 chr5B.!!$F3 824
23 TraesCS1B01G249600 chr4A 732979167 732979988 821 False 990.0 990 88.4990 3 823 1 chr4A.!!$F2 820
24 TraesCS1B01G249600 chr7B 687548389 687549217 828 False 989.0 989 88.3270 1 823 1 chr7B.!!$F2 822

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
879 905 0.721155 CGTTTGTGCACGTTCATCGG 60.721 55.0 13.13 0.0 44.69 4.18 F
1331 1453 0.460987 GCAGCGTATTCTCAGCCAGT 60.461 55.0 0.00 0.0 0.00 4.00 F
3178 3573 0.095417 GAAGGCTTCATTCGTCACGC 59.905 55.0 21.99 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1750 1885 0.581529 CTGCAGCGACAGAACGAAAA 59.418 50.000 0.0 0.0 40.25 2.29 R
3180 3575 0.398318 AGAGGTTTCCACTCAGCACC 59.602 55.000 0.0 0.0 37.43 5.01 R
4585 4982 1.062525 GCGCATTAGAAACTGGCCG 59.937 57.895 0.3 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
234 240 2.125310 CGGGTGTAGGCGATGCAA 60.125 61.111 0.00 0.00 0.00 4.08
436 443 5.741388 AACCGATCAAGCATAGATCAAAC 57.259 39.130 11.81 0.00 41.49 2.93
439 446 5.824624 ACCGATCAAGCATAGATCAAACAAT 59.175 36.000 11.81 0.00 41.49 2.71
653 669 1.269998 CGGCTAGGGTTTAGGATCGAG 59.730 57.143 0.00 0.00 0.00 4.04
654 670 2.595238 GGCTAGGGTTTAGGATCGAGA 58.405 52.381 0.00 0.00 0.00 4.04
677 694 8.268878 AGATAAGGCTGATACCTGTTAGAAAT 57.731 34.615 0.00 0.00 39.93 2.17
683 703 6.183360 GGCTGATACCTGTTAGAAATGAGAGA 60.183 42.308 0.00 0.00 0.00 3.10
844 870 4.334759 CAGATATCAAGTTGGCAACTCTGG 59.665 45.833 31.24 22.63 41.91 3.86
853 879 2.297129 GCAACTCTGGGCCTCTCCT 61.297 63.158 4.53 0.00 34.39 3.69
859 885 1.563410 CTCTGGGCCTCTCCTCATTTT 59.437 52.381 4.53 0.00 34.39 1.82
879 905 0.721155 CGTTTGTGCACGTTCATCGG 60.721 55.000 13.13 0.00 44.69 4.18
891 917 2.032054 CGTTCATCGGCAATGTAATGCT 59.968 45.455 0.00 0.00 45.68 3.79
896 922 1.135141 TCGGCAATGTAATGCTTTGGC 60.135 47.619 11.92 11.92 46.88 4.52
928 954 3.808174 AGCTAGGTCTTGTTTCGTGTTTC 59.192 43.478 0.00 0.00 0.00 2.78
929 955 3.808174 GCTAGGTCTTGTTTCGTGTTTCT 59.192 43.478 0.00 0.00 0.00 2.52
943 969 4.035909 TCGTGTTTCTTTAACTTTGCTCCC 59.964 41.667 0.00 0.00 37.64 4.30
952 980 3.418684 AACTTTGCTCCCGAGTGTATT 57.581 42.857 0.00 0.00 0.00 1.89
972 1000 7.819900 GTGTATTCAGGAGACTTTGTATGACTT 59.180 37.037 0.00 0.00 40.21 3.01
973 1001 8.035394 TGTATTCAGGAGACTTTGTATGACTTC 58.965 37.037 0.00 0.00 40.21 3.01
975 1003 3.614616 CAGGAGACTTTGTATGACTTCGC 59.385 47.826 0.00 0.00 40.21 4.70
1003 1123 3.542742 GCGCTACCGTGTTCGCTC 61.543 66.667 0.00 0.00 43.70 5.03
1016 1137 2.202756 CGCTCGGTGAAGGGTAGC 60.203 66.667 0.00 0.00 0.00 3.58
1021 1142 1.134560 CTCGGTGAAGGGTAGCTGTAC 59.865 57.143 0.00 0.00 0.00 2.90
1060 1181 3.055819 CGAGGTCCTCAAAATCTGAAGGA 60.056 47.826 19.15 0.00 32.17 3.36
1069 1190 8.163408 TCCTCAAAATCTGAAGGATAGTTTTGA 58.837 33.333 10.75 10.75 36.83 2.69
1087 1208 1.133915 TGAAGGGTGGTGTTCTGTTCC 60.134 52.381 0.00 0.00 0.00 3.62
1115 1236 2.985847 GCTGGGCTGGTTCACACC 60.986 66.667 0.00 0.00 44.56 4.16
1133 1255 0.464554 CCAGGAAAGCCTCGATTCCC 60.465 60.000 11.12 0.00 44.80 3.97
1330 1452 1.156645 GGCAGCGTATTCTCAGCCAG 61.157 60.000 0.00 0.00 41.63 4.85
1331 1453 0.460987 GCAGCGTATTCTCAGCCAGT 60.461 55.000 0.00 0.00 0.00 4.00
1410 1532 0.464373 TGCCTCCCTCGCATTGAATC 60.464 55.000 0.00 0.00 0.00 2.52
1445 1567 0.821517 TCCTACGCCACCAGTACATG 59.178 55.000 0.00 0.00 0.00 3.21
1480 1602 1.753463 ATCCCGGTGTCGTCTCTCC 60.753 63.158 0.00 0.00 33.95 3.71
1481 1603 2.494777 ATCCCGGTGTCGTCTCTCCA 62.495 60.000 0.00 0.00 33.95 3.86
1483 1605 2.701780 CCGGTGTCGTCTCTCCAGG 61.702 68.421 0.00 0.00 33.95 4.45
1495 1617 1.669115 CTCCAGGTCAGCAACACCG 60.669 63.158 0.00 0.00 39.13 4.94
1604 1726 0.988678 ATCTGGACCAGTAAGCCCCC 60.989 60.000 21.06 0.00 32.61 5.40
1642 1764 9.897744 TTTTCTCTGTAGTAAATTTCTGCATTG 57.102 29.630 0.00 0.00 0.00 2.82
1673 1795 0.608035 ATTTGAAAAGCCGGCGAGGA 60.608 50.000 23.20 5.00 45.00 3.71
1677 1799 3.901797 AAAAGCCGGCGAGGAGTGG 62.902 63.158 23.20 0.00 45.00 4.00
1714 1845 5.852827 TGTTCAGTGTCAGACAATGTCATA 58.147 37.500 26.05 12.71 43.81 2.15
1724 1859 3.972638 AGACAATGTCATAGAGGCCATCT 59.027 43.478 16.38 7.78 37.23 2.90
1729 1864 4.613925 TGTCATAGAGGCCATCTCATTC 57.386 45.455 5.01 0.00 44.81 2.67
1735 1870 6.327365 TCATAGAGGCCATCTCATTCTACAAA 59.673 38.462 5.01 0.00 44.81 2.83
1753 1888 3.481112 AAACGCGTTTGACTGACTTTT 57.519 38.095 34.36 7.53 0.00 2.27
1853 1989 2.398554 CGGGGTGGCAAACGATGAG 61.399 63.158 0.00 0.00 0.00 2.90
1892 2028 0.465460 AACGTGTGCTGGTTCATGGT 60.465 50.000 0.00 0.00 0.00 3.55
1905 2041 2.684881 GTTCATGGTGCCTGATTTCGAT 59.315 45.455 0.00 0.00 0.00 3.59
2022 2158 4.554363 CTCTACGCCCTGTCGCCG 62.554 72.222 0.00 0.00 0.00 6.46
2164 2513 8.316640 ACATAAAAAGTCACTCTTGATCTGAC 57.683 34.615 4.32 4.32 36.40 3.51
2200 2549 1.153429 GTGGTATCCTGCCGTGACC 60.153 63.158 0.00 0.00 0.00 4.02
2292 2641 2.358737 GGTGTGCTCCCCGAACAG 60.359 66.667 0.00 0.00 0.00 3.16
2431 2780 3.275999 CATCATGCTCTTCACCATGTCA 58.724 45.455 0.00 0.00 39.74 3.58
2681 3051 1.821332 GGTCTCCGACGGGTACGAT 60.821 63.158 15.25 0.00 44.60 3.73
2682 3052 1.379642 GGTCTCCGACGGGTACGATT 61.380 60.000 15.25 0.00 44.60 3.34
2683 3053 1.299541 GTCTCCGACGGGTACGATTA 58.700 55.000 15.25 0.00 44.60 1.75
2684 3054 1.003438 GTCTCCGACGGGTACGATTAC 60.003 57.143 15.25 0.00 44.60 1.89
2886 3268 0.676466 CGCTCACACCATGGCCTAAA 60.676 55.000 13.04 0.00 0.00 1.85
2915 3307 0.173255 GCTCTCAGCTCTCAGTCACC 59.827 60.000 0.00 0.00 38.45 4.02
2987 3382 1.304217 GACAGGGAGGACGTGGAGA 60.304 63.158 0.00 0.00 39.23 3.71
3025 3420 1.296392 CGGCCACAAGATCCTGACA 59.704 57.895 2.24 0.00 0.00 3.58
3052 3447 4.814294 GACCAGTTCGGCGCGGAT 62.814 66.667 18.95 2.85 39.03 4.18
3110 3505 1.268589 ACGCCTACGACATCTTCATCG 60.269 52.381 0.00 0.00 43.93 3.84
3139 3534 2.523015 GCCTCGCTCAAATGACAAATG 58.477 47.619 0.00 0.00 0.00 2.32
3140 3535 2.162208 GCCTCGCTCAAATGACAAATGA 59.838 45.455 0.00 0.00 0.00 2.57
3152 3547 0.250124 ACAAATGAAGACCGACGGCA 60.250 50.000 15.39 3.80 0.00 5.69
3168 3563 3.043713 CAGCGCGTGAAGGCTTCA 61.044 61.111 25.38 25.38 37.41 3.02
3169 3564 2.046892 AGCGCGTGAAGGCTTCAT 60.047 55.556 30.70 13.47 42.47 2.57
3175 3570 1.428448 CGTGAAGGCTTCATTCGTCA 58.572 50.000 30.70 5.93 42.47 4.35
3176 3571 1.126846 CGTGAAGGCTTCATTCGTCAC 59.873 52.381 30.70 16.77 42.47 3.67
3177 3572 1.126846 GTGAAGGCTTCATTCGTCACG 59.873 52.381 30.70 0.00 42.47 4.35
3178 3573 0.095417 GAAGGCTTCATTCGTCACGC 59.905 55.000 21.99 0.00 0.00 5.34
3179 3574 1.298859 AAGGCTTCATTCGTCACGCC 61.299 55.000 0.00 0.00 37.80 5.68
3180 3575 2.395690 GCTTCATTCGTCACGCCG 59.604 61.111 0.00 0.00 0.00 6.46
3181 3576 3.081133 CTTCATTCGTCACGCCGG 58.919 61.111 0.00 0.00 0.00 6.13
3182 3577 1.736645 CTTCATTCGTCACGCCGGT 60.737 57.895 1.90 0.00 0.00 5.28
3183 3578 1.955529 CTTCATTCGTCACGCCGGTG 61.956 60.000 14.93 14.93 45.78 4.94
3184 3579 4.147322 CATTCGTCACGCCGGTGC 62.147 66.667 16.69 0.00 44.03 5.01
3185 3580 4.373116 ATTCGTCACGCCGGTGCT 62.373 61.111 16.69 0.00 44.03 4.40
3189 3584 4.664677 GTCACGCCGGTGCTGAGT 62.665 66.667 16.69 0.00 44.03 3.41
3190 3585 4.662961 TCACGCCGGTGCTGAGTG 62.663 66.667 16.69 5.47 44.03 3.51
3193 3588 4.680237 CGCCGGTGCTGAGTGGAA 62.680 66.667 0.00 0.00 34.43 3.53
3194 3589 2.281484 GCCGGTGCTGAGTGGAAA 60.281 61.111 1.90 0.00 33.53 3.13
3195 3590 2.617274 GCCGGTGCTGAGTGGAAAC 61.617 63.158 1.90 0.00 33.53 2.78
3196 3591 1.966451 CCGGTGCTGAGTGGAAACC 60.966 63.158 0.00 0.00 0.00 3.27
3197 3592 1.071471 CGGTGCTGAGTGGAAACCT 59.929 57.895 0.00 0.00 0.00 3.50
3198 3593 0.951040 CGGTGCTGAGTGGAAACCTC 60.951 60.000 0.00 0.00 0.00 3.85
3199 3594 0.398318 GGTGCTGAGTGGAAACCTCT 59.602 55.000 0.00 0.00 0.00 3.69
3200 3595 1.202818 GGTGCTGAGTGGAAACCTCTT 60.203 52.381 0.00 0.00 0.00 2.85
3201 3596 2.038557 GGTGCTGAGTGGAAACCTCTTA 59.961 50.000 0.00 0.00 0.00 2.10
3202 3597 3.307762 GGTGCTGAGTGGAAACCTCTTAT 60.308 47.826 0.00 0.00 0.00 1.73
3203 3598 4.327680 GTGCTGAGTGGAAACCTCTTATT 58.672 43.478 0.00 0.00 0.00 1.40
3204 3599 5.488341 GTGCTGAGTGGAAACCTCTTATTA 58.512 41.667 0.00 0.00 0.00 0.98
3205 3600 5.582665 GTGCTGAGTGGAAACCTCTTATTAG 59.417 44.000 0.00 0.00 0.00 1.73
3206 3601 5.119694 GCTGAGTGGAAACCTCTTATTAGG 58.880 45.833 0.00 0.00 42.82 2.69
3207 3602 5.099042 TGAGTGGAAACCTCTTATTAGGC 57.901 43.478 0.00 0.00 40.62 3.93
3208 3603 4.783227 TGAGTGGAAACCTCTTATTAGGCT 59.217 41.667 0.00 0.00 40.62 4.58
3209 3604 5.104259 AGTGGAAACCTCTTATTAGGCTG 57.896 43.478 0.00 0.00 40.62 4.85
3210 3605 4.080299 AGTGGAAACCTCTTATTAGGCTGG 60.080 45.833 0.00 0.00 40.62 4.85
3211 3606 3.850173 TGGAAACCTCTTATTAGGCTGGT 59.150 43.478 0.00 0.00 40.62 4.00
3212 3607 4.080526 TGGAAACCTCTTATTAGGCTGGTC 60.081 45.833 0.00 0.00 40.62 4.02
3213 3608 4.080526 GGAAACCTCTTATTAGGCTGGTCA 60.081 45.833 0.00 0.00 40.62 4.02
3214 3609 5.398012 GGAAACCTCTTATTAGGCTGGTCAT 60.398 44.000 0.00 0.00 40.62 3.06
3215 3610 6.183361 GGAAACCTCTTATTAGGCTGGTCATA 60.183 42.308 0.00 0.00 40.62 2.15
3216 3611 6.426646 AACCTCTTATTAGGCTGGTCATAG 57.573 41.667 0.00 0.00 40.62 2.23
3217 3612 5.468658 ACCTCTTATTAGGCTGGTCATAGT 58.531 41.667 0.00 0.00 40.62 2.12
3218 3613 5.305644 ACCTCTTATTAGGCTGGTCATAGTG 59.694 44.000 0.00 0.00 40.62 2.74
3219 3614 5.540337 CCTCTTATTAGGCTGGTCATAGTGA 59.460 44.000 0.00 0.00 0.00 3.41
3220 3615 6.295011 CCTCTTATTAGGCTGGTCATAGTGAG 60.295 46.154 0.00 1.50 0.00 3.51
3221 3616 5.540337 TCTTATTAGGCTGGTCATAGTGAGG 59.460 44.000 0.00 0.00 0.00 3.86
3222 3617 3.398318 TTAGGCTGGTCATAGTGAGGA 57.602 47.619 0.00 0.00 0.00 3.71
3223 3618 1.786937 AGGCTGGTCATAGTGAGGAG 58.213 55.000 0.00 0.00 0.00 3.69
3224 3619 1.007721 AGGCTGGTCATAGTGAGGAGT 59.992 52.381 0.00 0.00 0.00 3.85
3225 3620 2.245028 AGGCTGGTCATAGTGAGGAGTA 59.755 50.000 0.00 0.00 0.00 2.59
3226 3621 3.031736 GGCTGGTCATAGTGAGGAGTAA 58.968 50.000 0.00 0.00 0.00 2.24
3227 3622 3.181474 GGCTGGTCATAGTGAGGAGTAAC 60.181 52.174 0.00 0.00 0.00 2.50
3228 3623 3.702045 GCTGGTCATAGTGAGGAGTAACT 59.298 47.826 0.00 0.00 0.00 2.24
3229 3624 4.160626 GCTGGTCATAGTGAGGAGTAACTT 59.839 45.833 0.00 0.00 0.00 2.66
3230 3625 5.360144 GCTGGTCATAGTGAGGAGTAACTTA 59.640 44.000 0.00 0.00 0.00 2.24
3231 3626 6.460399 GCTGGTCATAGTGAGGAGTAACTTAG 60.460 46.154 0.00 0.00 0.00 2.18
3232 3627 6.728411 TGGTCATAGTGAGGAGTAACTTAGA 58.272 40.000 0.00 0.00 0.00 2.10
3233 3628 6.602406 TGGTCATAGTGAGGAGTAACTTAGAC 59.398 42.308 0.00 0.00 32.58 2.59
3234 3629 6.829811 GGTCATAGTGAGGAGTAACTTAGACT 59.170 42.308 0.00 0.00 33.27 3.24
3235 3630 7.992033 GGTCATAGTGAGGAGTAACTTAGACTA 59.008 40.741 0.00 0.00 33.27 2.59
3236 3631 9.048446 GTCATAGTGAGGAGTAACTTAGACTAG 57.952 40.741 0.00 0.00 31.58 2.57
3237 3632 8.770322 TCATAGTGAGGAGTAACTTAGACTAGT 58.230 37.037 0.00 0.00 0.00 2.57
3240 3635 8.791327 AGTGAGGAGTAACTTAGACTAGTAAC 57.209 38.462 0.00 0.00 0.00 2.50
3241 3636 8.381636 AGTGAGGAGTAACTTAGACTAGTAACA 58.618 37.037 0.00 0.00 0.00 2.41
3242 3637 9.176460 GTGAGGAGTAACTTAGACTAGTAACAT 57.824 37.037 0.00 0.00 0.00 2.71
3243 3638 9.175312 TGAGGAGTAACTTAGACTAGTAACATG 57.825 37.037 0.00 0.00 0.00 3.21
3244 3639 7.998580 AGGAGTAACTTAGACTAGTAACATGC 58.001 38.462 0.00 0.00 0.00 4.06
3245 3640 7.614583 AGGAGTAACTTAGACTAGTAACATGCA 59.385 37.037 0.00 0.00 0.00 3.96
3246 3641 8.414778 GGAGTAACTTAGACTAGTAACATGCAT 58.585 37.037 0.00 0.00 0.00 3.96
3281 3676 9.168553 AGTCTATGTTACTACCTCTATAGTGGA 57.831 37.037 24.32 9.50 36.09 4.02
3282 3677 9.962809 GTCTATGTTACTACCTCTATAGTGGAT 57.037 37.037 24.32 12.60 36.09 3.41
3309 3704 9.645059 AGTAACATATATGTAGTGTCATGCATC 57.355 33.333 18.56 0.00 40.80 3.91
3310 3705 9.423061 GTAACATATATGTAGTGTCATGCATCA 57.577 33.333 18.56 0.00 40.80 3.07
3311 3706 7.895975 ACATATATGTAGTGTCATGCATCAC 57.104 36.000 16.85 9.88 39.68 3.06
3312 3707 6.875726 ACATATATGTAGTGTCATGCATCACC 59.124 38.462 16.85 0.00 39.68 4.02
3313 3708 3.920231 ATGTAGTGTCATGCATCACCT 57.080 42.857 13.37 6.04 35.45 4.00
3314 3709 3.251479 TGTAGTGTCATGCATCACCTC 57.749 47.619 13.37 8.53 35.45 3.85
3315 3710 2.196749 GTAGTGTCATGCATCACCTCG 58.803 52.381 13.37 0.00 35.45 4.63
3316 3711 0.610174 AGTGTCATGCATCACCTCGT 59.390 50.000 13.37 0.00 35.45 4.18
3317 3712 1.002430 AGTGTCATGCATCACCTCGTT 59.998 47.619 13.37 0.00 35.45 3.85
3318 3713 1.806542 GTGTCATGCATCACCTCGTTT 59.193 47.619 0.00 0.00 0.00 3.60
3319 3714 3.000041 GTGTCATGCATCACCTCGTTTA 59.000 45.455 0.00 0.00 0.00 2.01
3320 3715 3.623060 GTGTCATGCATCACCTCGTTTAT 59.377 43.478 0.00 0.00 0.00 1.40
3321 3716 4.094887 GTGTCATGCATCACCTCGTTTATT 59.905 41.667 0.00 0.00 0.00 1.40
3322 3717 5.293324 GTGTCATGCATCACCTCGTTTATTA 59.707 40.000 0.00 0.00 0.00 0.98
3323 3718 5.293324 TGTCATGCATCACCTCGTTTATTAC 59.707 40.000 0.00 0.00 0.00 1.89
3324 3719 5.523916 GTCATGCATCACCTCGTTTATTACT 59.476 40.000 0.00 0.00 0.00 2.24
3325 3720 6.037172 GTCATGCATCACCTCGTTTATTACTT 59.963 38.462 0.00 0.00 0.00 2.24
3326 3721 6.597672 TCATGCATCACCTCGTTTATTACTTT 59.402 34.615 0.00 0.00 0.00 2.66
3327 3722 6.176975 TGCATCACCTCGTTTATTACTTTG 57.823 37.500 0.00 0.00 0.00 2.77
3328 3723 5.703592 TGCATCACCTCGTTTATTACTTTGT 59.296 36.000 0.00 0.00 0.00 2.83
3329 3724 6.874664 TGCATCACCTCGTTTATTACTTTGTA 59.125 34.615 0.00 0.00 0.00 2.41
3330 3725 7.064134 TGCATCACCTCGTTTATTACTTTGTAG 59.936 37.037 0.00 0.00 0.00 2.74
3331 3726 7.277098 GCATCACCTCGTTTATTACTTTGTAGA 59.723 37.037 0.00 0.00 0.00 2.59
3332 3727 8.592998 CATCACCTCGTTTATTACTTTGTAGAC 58.407 37.037 0.00 0.00 0.00 2.59
3333 3728 7.889469 TCACCTCGTTTATTACTTTGTAGACT 58.111 34.615 0.00 0.00 0.00 3.24
3334 3729 8.025445 TCACCTCGTTTATTACTTTGTAGACTC 58.975 37.037 0.00 0.00 0.00 3.36
3335 3730 7.811236 CACCTCGTTTATTACTTTGTAGACTCA 59.189 37.037 0.00 0.00 0.00 3.41
3336 3731 8.529476 ACCTCGTTTATTACTTTGTAGACTCAT 58.471 33.333 0.00 0.00 0.00 2.90
3337 3732 9.367444 CCTCGTTTATTACTTTGTAGACTCATT 57.633 33.333 0.00 0.00 0.00 2.57
3345 3740 9.630098 ATTACTTTGTAGACTCATTTTGCATTG 57.370 29.630 0.00 0.00 0.00 2.82
3346 3741 6.449698 ACTTTGTAGACTCATTTTGCATTGG 58.550 36.000 0.00 0.00 0.00 3.16
3347 3742 5.389859 TTGTAGACTCATTTTGCATTGGG 57.610 39.130 0.00 0.00 0.00 4.12
3348 3743 4.661222 TGTAGACTCATTTTGCATTGGGA 58.339 39.130 0.00 0.00 0.00 4.37
3349 3744 5.076182 TGTAGACTCATTTTGCATTGGGAA 58.924 37.500 0.00 0.00 0.00 3.97
3350 3745 4.525912 AGACTCATTTTGCATTGGGAAC 57.474 40.909 0.00 0.00 0.00 3.62
3363 3758 3.006672 GGGAACCGCTATGTGATGG 57.993 57.895 0.00 0.00 40.86 3.51
3364 3759 0.180406 GGGAACCGCTATGTGATGGT 59.820 55.000 0.00 0.00 40.86 3.55
3365 3760 1.414919 GGGAACCGCTATGTGATGGTA 59.585 52.381 0.00 0.00 40.86 3.25
3366 3761 2.158871 GGGAACCGCTATGTGATGGTAA 60.159 50.000 0.00 0.00 40.86 2.85
3367 3762 2.870411 GGAACCGCTATGTGATGGTAAC 59.130 50.000 0.00 0.00 33.45 2.50
3398 3793 8.885494 ATGTTACTCTATTTGCATCTCTCTTC 57.115 34.615 0.00 0.00 0.00 2.87
3399 3794 7.840931 TGTTACTCTATTTGCATCTCTCTTCA 58.159 34.615 0.00 0.00 0.00 3.02
3400 3795 8.481314 TGTTACTCTATTTGCATCTCTCTTCAT 58.519 33.333 0.00 0.00 0.00 2.57
3401 3796 9.323985 GTTACTCTATTTGCATCTCTCTTCATT 57.676 33.333 0.00 0.00 0.00 2.57
3411 3806 9.671279 TTGCATCTCTCTTCATTAATTACTTGA 57.329 29.630 0.00 0.00 0.00 3.02
3412 3807 9.102757 TGCATCTCTCTTCATTAATTACTTGAC 57.897 33.333 0.00 0.00 0.00 3.18
3413 3808 9.102757 GCATCTCTCTTCATTAATTACTTGACA 57.897 33.333 0.00 0.00 0.00 3.58
3418 3813 9.942850 TCTCTTCATTAATTACTTGACACATCA 57.057 29.630 0.00 0.00 0.00 3.07
3446 3841 5.657826 TTTTGCTTATGTGGCATGTATGT 57.342 34.783 0.00 0.00 39.54 2.29
3447 3842 5.657826 TTTGCTTATGTGGCATGTATGTT 57.342 34.783 0.00 0.00 39.54 2.71
3448 3843 6.765915 TTTGCTTATGTGGCATGTATGTTA 57.234 33.333 0.00 0.00 39.54 2.41
3449 3844 5.749596 TGCTTATGTGGCATGTATGTTAC 57.250 39.130 0.00 0.00 34.56 2.50
3450 3845 5.436175 TGCTTATGTGGCATGTATGTTACT 58.564 37.500 0.00 0.00 34.56 2.24
3451 3846 6.587273 TGCTTATGTGGCATGTATGTTACTA 58.413 36.000 0.00 0.00 34.56 1.82
3452 3847 6.481976 TGCTTATGTGGCATGTATGTTACTAC 59.518 38.462 0.00 0.00 34.56 2.73
3453 3848 6.073222 GCTTATGTGGCATGTATGTTACTACC 60.073 42.308 0.00 0.00 0.00 3.18
3454 3849 5.630415 ATGTGGCATGTATGTTACTACCT 57.370 39.130 0.00 0.00 0.00 3.08
3455 3850 6.740944 ATGTGGCATGTATGTTACTACCTA 57.259 37.500 0.00 0.00 0.00 3.08
3456 3851 6.740944 TGTGGCATGTATGTTACTACCTAT 57.259 37.500 0.00 0.00 0.00 2.57
3457 3852 6.521162 TGTGGCATGTATGTTACTACCTATG 58.479 40.000 0.00 0.00 0.00 2.23
3458 3853 6.099125 TGTGGCATGTATGTTACTACCTATGT 59.901 38.462 0.00 0.00 0.00 2.29
3459 3854 6.990349 GTGGCATGTATGTTACTACCTATGTT 59.010 38.462 0.00 0.00 0.00 2.71
3460 3855 8.145767 GTGGCATGTATGTTACTACCTATGTTA 58.854 37.037 0.00 0.00 0.00 2.41
3461 3856 8.145767 TGGCATGTATGTTACTACCTATGTTAC 58.854 37.037 0.00 0.00 0.00 2.50
3462 3857 8.365647 GGCATGTATGTTACTACCTATGTTACT 58.634 37.037 0.00 0.00 0.00 2.24
3463 3858 9.408069 GCATGTATGTTACTACCTATGTTACTC 57.592 37.037 0.00 0.00 0.00 2.59
3464 3859 9.909644 CATGTATGTTACTACCTATGTTACTCC 57.090 37.037 0.00 0.00 0.00 3.85
3465 3860 8.469309 TGTATGTTACTACCTATGTTACTCCC 57.531 38.462 0.00 0.00 0.00 4.30
3466 3861 8.060689 TGTATGTTACTACCTATGTTACTCCCA 58.939 37.037 0.00 0.00 0.00 4.37
3467 3862 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
3468 3863 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
3469 3864 7.642186 TGTTACTACCTATGTTACTCCCACTA 58.358 38.462 0.00 0.00 0.00 2.74
3470 3865 8.284435 TGTTACTACCTATGTTACTCCCACTAT 58.716 37.037 0.00 0.00 0.00 2.12
3471 3866 8.574737 GTTACTACCTATGTTACTCCCACTATG 58.425 40.741 0.00 0.00 0.00 2.23
3472 3867 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
3473 3868 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
3474 3869 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
3475 3870 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
3476 3871 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
3477 3872 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
3478 3873 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
3479 3874 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
3480 3875 1.207791 CTCCCACTATGACCAGCCTT 58.792 55.000 0.00 0.00 0.00 4.35
3481 3876 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
3482 3877 2.103263 CTCCCACTATGACCAGCCTTAC 59.897 54.545 0.00 0.00 0.00 2.34
3483 3878 1.141053 CCCACTATGACCAGCCTTACC 59.859 57.143 0.00 0.00 0.00 2.85
3484 3879 1.141053 CCACTATGACCAGCCTTACCC 59.859 57.143 0.00 0.00 0.00 3.69
3485 3880 1.120530 ACTATGACCAGCCTTACCCG 58.879 55.000 0.00 0.00 0.00 5.28
3486 3881 1.120530 CTATGACCAGCCTTACCCGT 58.879 55.000 0.00 0.00 0.00 5.28
3487 3882 0.828022 TATGACCAGCCTTACCCGTG 59.172 55.000 0.00 0.00 0.00 4.94
3488 3883 2.436115 GACCAGCCTTACCCGTGC 60.436 66.667 0.00 0.00 0.00 5.34
3489 3884 3.971109 GACCAGCCTTACCCGTGCC 62.971 68.421 0.00 0.00 0.00 5.01
3494 3889 3.771160 CCTTACCCGTGCCGCTCT 61.771 66.667 0.00 0.00 0.00 4.09
3495 3890 2.420568 CCTTACCCGTGCCGCTCTA 61.421 63.158 0.00 0.00 0.00 2.43
3496 3891 1.226888 CTTACCCGTGCCGCTCTAC 60.227 63.158 0.00 0.00 0.00 2.59
3497 3892 1.940883 CTTACCCGTGCCGCTCTACA 61.941 60.000 0.00 0.00 0.00 2.74
3498 3893 1.940883 TTACCCGTGCCGCTCTACAG 61.941 60.000 0.00 0.00 0.00 2.74
3499 3894 2.825075 TACCCGTGCCGCTCTACAGA 62.825 60.000 0.00 0.00 0.00 3.41
3500 3895 2.786495 CCCGTGCCGCTCTACAGAT 61.786 63.158 0.00 0.00 0.00 2.90
3501 3896 1.589993 CCGTGCCGCTCTACAGATG 60.590 63.158 0.00 0.00 0.00 2.90
3502 3897 1.589993 CGTGCCGCTCTACAGATGG 60.590 63.158 0.00 0.00 0.00 3.51
3503 3898 1.517832 GTGCCGCTCTACAGATGGT 59.482 57.895 0.00 0.00 0.00 3.55
3504 3899 0.108138 GTGCCGCTCTACAGATGGTT 60.108 55.000 0.00 0.00 0.00 3.67
3505 3900 0.175760 TGCCGCTCTACAGATGGTTC 59.824 55.000 0.00 0.00 0.00 3.62
3506 3901 0.461961 GCCGCTCTACAGATGGTTCT 59.538 55.000 1.12 0.00 0.00 3.01
3507 3902 1.537135 GCCGCTCTACAGATGGTTCTC 60.537 57.143 1.12 0.00 0.00 2.87
3508 3903 1.067821 CCGCTCTACAGATGGTTCTCC 59.932 57.143 0.00 0.00 0.00 3.71
3509 3904 1.268794 CGCTCTACAGATGGTTCTCCG 60.269 57.143 0.00 0.00 36.30 4.63
3510 3905 2.025155 GCTCTACAGATGGTTCTCCGA 58.975 52.381 0.00 0.00 36.30 4.55
3511 3906 2.223618 GCTCTACAGATGGTTCTCCGAC 60.224 54.545 0.00 0.00 36.30 4.79
3512 3907 2.359531 CTCTACAGATGGTTCTCCGACC 59.640 54.545 0.00 0.00 40.23 4.79
3521 3916 4.931661 TGGTTCTCCGACCAATAGTATC 57.068 45.455 0.00 0.00 46.33 2.24
3522 3917 4.543689 TGGTTCTCCGACCAATAGTATCT 58.456 43.478 0.00 0.00 46.33 1.98
3523 3918 4.583489 TGGTTCTCCGACCAATAGTATCTC 59.417 45.833 0.00 0.00 46.33 2.75
3524 3919 4.828387 GGTTCTCCGACCAATAGTATCTCT 59.172 45.833 0.00 0.00 39.57 3.10
3525 3920 5.278561 GGTTCTCCGACCAATAGTATCTCTG 60.279 48.000 0.00 0.00 39.57 3.35
3526 3921 5.050126 TCTCCGACCAATAGTATCTCTGT 57.950 43.478 0.00 0.00 0.00 3.41
3527 3922 6.183810 TCTCCGACCAATAGTATCTCTGTA 57.816 41.667 0.00 0.00 0.00 2.74
3528 3923 6.780901 TCTCCGACCAATAGTATCTCTGTAT 58.219 40.000 0.00 0.00 0.00 2.29
3529 3924 7.232188 TCTCCGACCAATAGTATCTCTGTATT 58.768 38.462 0.00 0.00 0.00 1.89
3530 3925 7.390996 TCTCCGACCAATAGTATCTCTGTATTC 59.609 40.741 0.00 0.00 0.00 1.75
3531 3926 7.002276 TCCGACCAATAGTATCTCTGTATTCA 58.998 38.462 0.00 0.00 0.00 2.57
3532 3927 7.504574 TCCGACCAATAGTATCTCTGTATTCAA 59.495 37.037 0.00 0.00 0.00 2.69
3533 3928 7.595502 CCGACCAATAGTATCTCTGTATTCAAC 59.404 40.741 0.00 0.00 0.00 3.18
3534 3929 8.135529 CGACCAATAGTATCTCTGTATTCAACA 58.864 37.037 0.00 0.00 36.42 3.33
3535 3930 9.250624 GACCAATAGTATCTCTGTATTCAACAC 57.749 37.037 0.00 0.00 33.45 3.32
3536 3931 8.758829 ACCAATAGTATCTCTGTATTCAACACA 58.241 33.333 0.00 0.00 33.45 3.72
3537 3932 9.770097 CCAATAGTATCTCTGTATTCAACACAT 57.230 33.333 0.00 0.00 33.45 3.21
3542 3937 9.950496 AGTATCTCTGTATTCAACACATTTCTT 57.050 29.630 0.00 0.00 33.45 2.52
3544 3939 8.853077 ATCTCTGTATTCAACACATTTCTTCA 57.147 30.769 0.00 0.00 33.45 3.02
3545 3940 8.853077 TCTCTGTATTCAACACATTTCTTCAT 57.147 30.769 0.00 0.00 33.45 2.57
3546 3941 9.288576 TCTCTGTATTCAACACATTTCTTCATT 57.711 29.630 0.00 0.00 33.45 2.57
3547 3942 9.903682 CTCTGTATTCAACACATTTCTTCATTT 57.096 29.630 0.00 0.00 33.45 2.32
3554 3949 9.515020 TTCAACACATTTCTTCATTTAAGTCAC 57.485 29.630 0.00 0.00 36.51 3.67
3555 3950 8.902806 TCAACACATTTCTTCATTTAAGTCACT 58.097 29.630 0.00 0.00 36.51 3.41
3556 3951 8.961092 CAACACATTTCTTCATTTAAGTCACTG 58.039 33.333 0.00 0.00 36.51 3.66
3557 3952 8.225603 ACACATTTCTTCATTTAAGTCACTGT 57.774 30.769 0.00 0.00 36.51 3.55
3558 3953 9.337396 ACACATTTCTTCATTTAAGTCACTGTA 57.663 29.630 0.00 0.00 36.51 2.74
3565 3960 8.999431 TCTTCATTTAAGTCACTGTATTTCACC 58.001 33.333 0.00 0.00 36.51 4.02
3566 3961 8.684386 TTCATTTAAGTCACTGTATTTCACCA 57.316 30.769 0.00 0.00 0.00 4.17
3567 3962 8.322906 TCATTTAAGTCACTGTATTTCACCAG 57.677 34.615 0.00 0.00 34.82 4.00
3568 3963 6.554334 TTTAAGTCACTGTATTTCACCAGC 57.446 37.500 0.00 0.00 31.76 4.85
3569 3964 4.357918 AAGTCACTGTATTTCACCAGCT 57.642 40.909 0.00 0.00 31.76 4.24
3570 3965 3.668447 AGTCACTGTATTTCACCAGCTG 58.332 45.455 6.78 6.78 31.76 4.24
3571 3966 2.744202 GTCACTGTATTTCACCAGCTGG 59.256 50.000 31.60 31.60 42.17 4.85
3572 3967 2.637382 TCACTGTATTTCACCAGCTGGA 59.363 45.455 39.19 17.61 38.94 3.86
3573 3968 3.264193 TCACTGTATTTCACCAGCTGGAT 59.736 43.478 39.19 23.32 38.94 3.41
3574 3969 3.624861 CACTGTATTTCACCAGCTGGATC 59.375 47.826 39.19 18.55 38.94 3.36
3575 3970 3.209410 CTGTATTTCACCAGCTGGATCC 58.791 50.000 39.19 13.52 38.94 3.36
3576 3971 2.092429 TGTATTTCACCAGCTGGATCCC 60.092 50.000 39.19 18.32 38.94 3.85
3577 3972 1.002069 ATTTCACCAGCTGGATCCCA 58.998 50.000 39.19 18.10 38.94 4.37
3578 3973 0.038166 TTTCACCAGCTGGATCCCAC 59.962 55.000 39.19 0.42 38.94 4.61
3579 3974 1.852157 TTCACCAGCTGGATCCCACC 61.852 60.000 39.19 0.00 38.94 4.61
3580 3975 3.017581 ACCAGCTGGATCCCACCC 61.018 66.667 39.19 0.00 38.94 4.61
3581 3976 3.016971 CCAGCTGGATCCCACCCA 61.017 66.667 29.88 0.00 37.39 4.51
3582 3977 2.273449 CAGCTGGATCCCACCCAC 59.727 66.667 9.90 0.00 0.00 4.61
3583 3978 3.402681 AGCTGGATCCCACCCACG 61.403 66.667 9.90 0.00 0.00 4.94
3584 3979 3.717294 GCTGGATCCCACCCACGT 61.717 66.667 9.90 0.00 0.00 4.49
3585 3980 2.268920 CTGGATCCCACCCACGTG 59.731 66.667 9.90 9.08 39.91 4.49
3586 3981 2.203862 TGGATCCCACCCACGTGA 60.204 61.111 19.30 0.00 43.14 4.35
3587 3982 1.615124 TGGATCCCACCCACGTGAT 60.615 57.895 19.30 0.00 43.14 3.06
3588 3983 1.204786 TGGATCCCACCCACGTGATT 61.205 55.000 19.30 0.00 43.14 2.57
3589 3984 0.034477 GGATCCCACCCACGTGATTT 60.034 55.000 19.30 0.00 43.14 2.17
3590 3985 1.094785 GATCCCACCCACGTGATTTG 58.905 55.000 19.30 10.43 43.14 2.32
3591 3986 0.695924 ATCCCACCCACGTGATTTGA 59.304 50.000 19.30 7.16 43.14 2.69
3592 3987 0.250553 TCCCACCCACGTGATTTGAC 60.251 55.000 19.30 0.00 43.14 3.18
3593 3988 1.241315 CCCACCCACGTGATTTGACC 61.241 60.000 19.30 0.00 43.14 4.02
3594 3989 0.536233 CCACCCACGTGATTTGACCA 60.536 55.000 19.30 0.00 43.14 4.02
3595 3990 0.874390 CACCCACGTGATTTGACCAG 59.126 55.000 19.30 0.00 43.14 4.00
3596 3991 0.889186 ACCCACGTGATTTGACCAGC 60.889 55.000 19.30 0.00 0.00 4.85
3597 3992 0.606401 CCCACGTGATTTGACCAGCT 60.606 55.000 19.30 0.00 0.00 4.24
3598 3993 0.518636 CCACGTGATTTGACCAGCTG 59.481 55.000 19.30 6.78 0.00 4.24
3599 3994 0.518636 CACGTGATTTGACCAGCTGG 59.481 55.000 31.60 31.60 42.17 4.85
3600 3995 0.396435 ACGTGATTTGACCAGCTGGA 59.604 50.000 39.19 17.61 38.94 3.86
3601 3996 0.798776 CGTGATTTGACCAGCTGGAC 59.201 55.000 39.19 32.16 38.94 4.02
3602 3997 1.168714 GTGATTTGACCAGCTGGACC 58.831 55.000 39.19 27.39 38.94 4.46
3603 3998 1.067295 TGATTTGACCAGCTGGACCT 58.933 50.000 39.19 17.78 38.94 3.85
3604 3999 2.027192 GTGATTTGACCAGCTGGACCTA 60.027 50.000 39.19 22.11 38.94 3.08
3605 4000 2.027192 TGATTTGACCAGCTGGACCTAC 60.027 50.000 39.19 22.64 38.94 3.18
3606 4001 0.690762 TTTGACCAGCTGGACCTACC 59.309 55.000 39.19 18.68 38.94 3.18
3607 4002 0.178903 TTGACCAGCTGGACCTACCT 60.179 55.000 39.19 15.22 39.86 3.08
3608 4003 0.708209 TGACCAGCTGGACCTACCTA 59.292 55.000 39.19 13.13 39.86 3.08
3609 4004 1.112950 GACCAGCTGGACCTACCTAC 58.887 60.000 39.19 13.34 39.86 3.18
3610 4005 0.683504 ACCAGCTGGACCTACCTACG 60.684 60.000 39.19 8.24 39.86 3.51
3611 4006 1.437986 CAGCTGGACCTACCTACGC 59.562 63.158 5.57 0.00 39.86 4.42
3612 4007 2.119655 AGCTGGACCTACCTACGCG 61.120 63.158 3.53 3.53 39.86 6.01
3613 4008 2.117156 GCTGGACCTACCTACGCGA 61.117 63.158 15.93 0.00 39.86 5.87
3614 4009 1.453762 GCTGGACCTACCTACGCGAT 61.454 60.000 15.93 0.00 39.86 4.58
3615 4010 1.030457 CTGGACCTACCTACGCGATT 58.970 55.000 15.93 0.00 39.86 3.34
3616 4011 1.407979 CTGGACCTACCTACGCGATTT 59.592 52.381 15.93 0.00 39.86 2.17
3617 4012 1.406539 TGGACCTACCTACGCGATTTC 59.593 52.381 15.93 0.00 39.86 2.17
3618 4013 1.406539 GGACCTACCTACGCGATTTCA 59.593 52.381 15.93 0.00 35.41 2.69
3619 4014 2.543238 GGACCTACCTACGCGATTTCAG 60.543 54.545 15.93 3.80 35.41 3.02
3620 4015 2.097825 ACCTACCTACGCGATTTCAGT 58.902 47.619 15.93 3.55 0.00 3.41
3621 4016 2.098770 ACCTACCTACGCGATTTCAGTC 59.901 50.000 15.93 0.00 0.00 3.51
3622 4017 2.098607 CCTACCTACGCGATTTCAGTCA 59.901 50.000 15.93 0.00 0.00 3.41
3623 4018 2.961526 ACCTACGCGATTTCAGTCAT 57.038 45.000 15.93 0.00 0.00 3.06
3624 4019 2.540515 ACCTACGCGATTTCAGTCATG 58.459 47.619 15.93 0.00 0.00 3.07
3625 4020 2.094182 ACCTACGCGATTTCAGTCATGT 60.094 45.455 15.93 0.00 0.00 3.21
3626 4021 2.535984 CCTACGCGATTTCAGTCATGTC 59.464 50.000 15.93 0.00 0.00 3.06
3627 4022 1.359848 ACGCGATTTCAGTCATGTCC 58.640 50.000 15.93 0.00 0.00 4.02
3628 4023 0.652592 CGCGATTTCAGTCATGTCCC 59.347 55.000 0.00 0.00 0.00 4.46
3629 4024 1.740380 CGCGATTTCAGTCATGTCCCT 60.740 52.381 0.00 0.00 0.00 4.20
3630 4025 1.936547 GCGATTTCAGTCATGTCCCTC 59.063 52.381 0.00 0.00 0.00 4.30
3631 4026 2.196749 CGATTTCAGTCATGTCCCTCG 58.803 52.381 0.00 0.00 0.00 4.63
3632 4027 1.936547 GATTTCAGTCATGTCCCTCGC 59.063 52.381 0.00 0.00 0.00 5.03
3633 4028 0.976641 TTTCAGTCATGTCCCTCGCT 59.023 50.000 0.00 0.00 0.00 4.93
3634 4029 0.976641 TTCAGTCATGTCCCTCGCTT 59.023 50.000 0.00 0.00 0.00 4.68
3635 4030 0.976641 TCAGTCATGTCCCTCGCTTT 59.023 50.000 0.00 0.00 0.00 3.51
3636 4031 2.176045 TCAGTCATGTCCCTCGCTTTA 58.824 47.619 0.00 0.00 0.00 1.85
3637 4032 2.094182 TCAGTCATGTCCCTCGCTTTAC 60.094 50.000 0.00 0.00 0.00 2.01
3638 4033 1.899814 AGTCATGTCCCTCGCTTTACA 59.100 47.619 0.00 0.00 0.00 2.41
3639 4034 2.000447 GTCATGTCCCTCGCTTTACAC 59.000 52.381 0.00 0.00 0.00 2.90
3640 4035 1.621317 TCATGTCCCTCGCTTTACACA 59.379 47.619 0.00 0.00 0.00 3.72
3641 4036 1.732259 CATGTCCCTCGCTTTACACAC 59.268 52.381 0.00 0.00 0.00 3.82
3642 4037 1.045407 TGTCCCTCGCTTTACACACT 58.955 50.000 0.00 0.00 0.00 3.55
3643 4038 2.241160 TGTCCCTCGCTTTACACACTA 58.759 47.619 0.00 0.00 0.00 2.74
3644 4039 2.230508 TGTCCCTCGCTTTACACACTAG 59.769 50.000 0.00 0.00 0.00 2.57
3645 4040 1.203994 TCCCTCGCTTTACACACTAGC 59.796 52.381 0.00 0.00 0.00 3.42
3646 4041 1.067142 CCCTCGCTTTACACACTAGCA 60.067 52.381 0.00 0.00 34.62 3.49
3647 4042 2.611971 CCCTCGCTTTACACACTAGCAA 60.612 50.000 0.00 0.00 34.62 3.91
3648 4043 2.668457 CCTCGCTTTACACACTAGCAAG 59.332 50.000 0.00 0.00 34.62 4.01
3649 4044 3.318017 CTCGCTTTACACACTAGCAAGT 58.682 45.455 0.00 0.00 34.62 3.16
3675 4070 3.065682 CGCAACGCATGTTTAACGT 57.934 47.368 0.00 0.00 42.81 3.99
3676 4071 0.965014 CGCAACGCATGTTTAACGTC 59.035 50.000 0.00 0.00 39.49 4.34
3677 4072 1.397945 CGCAACGCATGTTTAACGTCT 60.398 47.619 0.00 0.00 39.49 4.18
3678 4073 2.646250 GCAACGCATGTTTAACGTCTT 58.354 42.857 0.00 0.00 39.49 3.01
3679 4074 2.400408 GCAACGCATGTTTAACGTCTTG 59.600 45.455 0.00 0.00 39.49 3.02
3680 4075 3.846744 GCAACGCATGTTTAACGTCTTGA 60.847 43.478 0.00 0.00 39.49 3.02
3681 4076 3.515071 ACGCATGTTTAACGTCTTGAC 57.485 42.857 0.00 0.00 34.35 3.18
3682 4077 3.128349 ACGCATGTTTAACGTCTTGACT 58.872 40.909 0.00 0.00 34.35 3.41
3683 4078 4.300803 ACGCATGTTTAACGTCTTGACTA 58.699 39.130 0.00 0.00 34.35 2.59
3684 4079 4.746115 ACGCATGTTTAACGTCTTGACTAA 59.254 37.500 0.00 0.00 34.35 2.24
3685 4080 5.407387 ACGCATGTTTAACGTCTTGACTAAT 59.593 36.000 0.00 0.00 34.35 1.73
3686 4081 6.587226 ACGCATGTTTAACGTCTTGACTAATA 59.413 34.615 0.00 0.00 34.35 0.98
3687 4082 7.277098 ACGCATGTTTAACGTCTTGACTAATAT 59.723 33.333 0.00 0.00 34.35 1.28
3688 4083 8.114290 CGCATGTTTAACGTCTTGACTAATATT 58.886 33.333 0.00 0.00 0.00 1.28
3695 4090 7.515957 AACGTCTTGACTAATATTACAACCG 57.484 36.000 0.00 2.51 0.00 4.44
3696 4091 6.038356 ACGTCTTGACTAATATTACAACCGG 58.962 40.000 0.00 0.00 0.00 5.28
3697 4092 6.127647 ACGTCTTGACTAATATTACAACCGGA 60.128 38.462 9.46 0.00 0.00 5.14
3698 4093 6.921857 CGTCTTGACTAATATTACAACCGGAT 59.078 38.462 9.46 0.00 0.00 4.18
3699 4094 8.077991 CGTCTTGACTAATATTACAACCGGATA 58.922 37.037 9.46 0.00 0.00 2.59
3700 4095 9.924650 GTCTTGACTAATATTACAACCGGATAT 57.075 33.333 9.46 0.00 0.00 1.63
3701 4096 9.923143 TCTTGACTAATATTACAACCGGATATG 57.077 33.333 9.46 6.80 0.00 1.78
3702 4097 9.923143 CTTGACTAATATTACAACCGGATATGA 57.077 33.333 9.46 0.00 0.00 2.15
3703 4098 9.923143 TTGACTAATATTACAACCGGATATGAG 57.077 33.333 9.46 5.67 0.00 2.90
3704 4099 9.304335 TGACTAATATTACAACCGGATATGAGA 57.696 33.333 9.46 0.00 0.00 3.27
3714 4109 8.268850 ACAACCGGATATGAGAATTAATATGC 57.731 34.615 9.46 0.00 0.00 3.14
3715 4110 7.882791 ACAACCGGATATGAGAATTAATATGCA 59.117 33.333 9.46 0.00 30.06 3.96
3716 4111 8.896744 CAACCGGATATGAGAATTAATATGCAT 58.103 33.333 9.46 3.79 30.06 3.96
3718 4113 9.770097 ACCGGATATGAGAATTAATATGCATAG 57.230 33.333 9.46 0.00 30.06 2.23
3719 4114 9.987272 CCGGATATGAGAATTAATATGCATAGA 57.013 33.333 12.79 0.00 30.06 1.98
3853 4249 9.553064 CAACTAACAGGATGAAAGATATAAGCT 57.447 33.333 0.00 0.00 39.69 3.74
4585 4982 0.329596 AGGAGCACACAGGATTTCCC 59.670 55.000 0.00 0.00 36.42 3.97
4648 5045 2.346766 TCTGAAACAGCTGCCAAAGA 57.653 45.000 15.27 9.59 0.00 2.52
4787 5184 8.688747 ATCAAAATCCCACAAGATTCTATCTC 57.311 34.615 0.00 0.00 39.08 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 2.357517 CTGCTCCGTTGGTCGCTT 60.358 61.111 0.00 0.00 38.35 4.68
234 240 2.282251 TGCTCCGACCGAGACACT 60.282 61.111 0.00 0.00 41.63 3.55
495 506 1.188219 AGAGTCTTCTTGCCGAGCCA 61.188 55.000 0.00 0.00 0.00 4.75
503 514 2.159114 GCTGCCCTAGAGAGTCTTCTTG 60.159 54.545 0.00 0.00 32.53 3.02
506 517 0.750249 GGCTGCCCTAGAGAGTCTTC 59.250 60.000 7.66 0.00 0.00 2.87
573 585 3.536917 CTCCATGACCGCCGCCTA 61.537 66.667 0.00 0.00 0.00 3.93
653 669 8.150945 TCATTTCTAACAGGTATCAGCCTTATC 58.849 37.037 0.00 0.00 36.58 1.75
654 670 8.034313 TCATTTCTAACAGGTATCAGCCTTAT 57.966 34.615 0.00 0.00 36.58 1.73
677 694 6.627087 AACTATTCCACCAAATCTCTCTCA 57.373 37.500 0.00 0.00 0.00 3.27
683 703 6.976934 ACAACAAACTATTCCACCAAATCT 57.023 33.333 0.00 0.00 0.00 2.40
766 791 9.959721 AGATAAACTAGAATTTGTTCTGCCTTA 57.040 29.630 0.00 0.00 32.72 2.69
827 853 0.823356 GCCCAGAGTTGCCAACTTGA 60.823 55.000 12.09 0.00 43.03 3.02
844 870 2.115343 AACGAAAATGAGGAGAGGCC 57.885 50.000 0.00 0.00 0.00 5.19
853 879 2.834574 ACGTGCACAAACGAAAATGA 57.165 40.000 18.64 0.00 46.49 2.57
859 885 0.231024 CGATGAACGTGCACAAACGA 59.769 50.000 18.64 0.00 46.49 3.85
879 905 3.235157 TGAGCCAAAGCATTACATTGC 57.765 42.857 0.00 0.00 43.56 3.56
891 917 4.662278 ACCTAGCTAAAACATGAGCCAAA 58.338 39.130 0.00 0.00 39.65 3.28
896 922 7.440523 AAACAAGACCTAGCTAAAACATGAG 57.559 36.000 0.00 0.00 0.00 2.90
928 954 3.139077 ACACTCGGGAGCAAAGTTAAAG 58.861 45.455 0.00 0.00 0.00 1.85
929 955 3.202829 ACACTCGGGAGCAAAGTTAAA 57.797 42.857 0.00 0.00 0.00 1.52
943 969 4.810790 ACAAAGTCTCCTGAATACACTCG 58.189 43.478 0.00 0.00 0.00 4.18
952 980 4.618460 GCGAAGTCATACAAAGTCTCCTGA 60.618 45.833 0.00 0.00 0.00 3.86
998 1118 2.707849 GCTACCCTTCACCGAGCGA 61.708 63.158 0.00 0.00 0.00 4.93
1002 1122 1.180029 GTACAGCTACCCTTCACCGA 58.820 55.000 0.00 0.00 0.00 4.69
1003 1123 0.892755 TGTACAGCTACCCTTCACCG 59.107 55.000 0.00 0.00 0.00 4.94
1016 1137 0.747255 CTGGGAGGGTCGATGTACAG 59.253 60.000 0.33 0.00 0.00 2.74
1021 1142 2.187946 GTGCTGGGAGGGTCGATG 59.812 66.667 0.00 0.00 0.00 3.84
1060 1181 4.827284 CAGAACACCACCCTTCAAAACTAT 59.173 41.667 0.00 0.00 0.00 2.12
1069 1190 1.222567 AGGAACAGAACACCACCCTT 58.777 50.000 0.00 0.00 0.00 3.95
1087 1208 4.006780 ACCAGCCCAGCAAAAATAAAAG 57.993 40.909 0.00 0.00 0.00 2.27
1115 1236 0.464554 GGGGAATCGAGGCTTTCCTG 60.465 60.000 14.44 0.00 44.46 3.86
1118 1239 1.523938 CGGGGGAATCGAGGCTTTC 60.524 63.158 0.00 0.00 0.00 2.62
1330 1452 1.218316 CTCCTGCCGGTGACCTTAC 59.782 63.158 1.90 0.00 0.00 2.34
1331 1453 1.987855 CCTCCTGCCGGTGACCTTA 60.988 63.158 1.90 0.00 0.00 2.69
1480 1602 3.716006 CGCGGTGTTGCTGACCTG 61.716 66.667 0.00 0.00 0.00 4.00
1604 1726 7.190920 ACTACAGAGAAAAATTGAAGGAACG 57.809 36.000 0.00 0.00 0.00 3.95
1642 1764 6.476706 CCGGCTTTTCAAATTGGAGATATTTC 59.523 38.462 0.00 0.00 0.00 2.17
1651 1773 0.038709 TCGCCGGCTTTTCAAATTGG 60.039 50.000 26.68 3.78 0.00 3.16
1673 1795 2.596851 AAGGACATGCTCCGCCACT 61.597 57.895 8.19 0.00 45.10 4.00
1677 1799 0.955428 TGAACAAGGACATGCTCCGC 60.955 55.000 8.19 0.00 45.10 5.54
1714 1845 4.681781 CGTTTGTAGAATGAGATGGCCTCT 60.682 45.833 3.32 4.09 42.44 3.69
1735 1870 1.005347 CGAAAAGTCAGTCAAACGCGT 60.005 47.619 5.58 5.58 0.00 6.01
1750 1885 0.581529 CTGCAGCGACAGAACGAAAA 59.418 50.000 0.00 0.00 40.25 2.29
1753 1888 2.734723 GCTGCAGCGACAGAACGA 60.735 61.111 25.23 0.00 40.25 3.85
2096 2438 3.561725 GGTCTGAACTTGAGTGGAAACTG 59.438 47.826 0.00 0.00 0.00 3.16
2098 2440 2.544267 CGGTCTGAACTTGAGTGGAAAC 59.456 50.000 0.00 0.00 0.00 2.78
2099 2441 2.169769 ACGGTCTGAACTTGAGTGGAAA 59.830 45.455 0.00 0.00 0.00 3.13
2100 2442 1.760613 ACGGTCTGAACTTGAGTGGAA 59.239 47.619 0.00 0.00 0.00 3.53
2104 2446 3.304525 CGACTAACGGTCTGAACTTGAGT 60.305 47.826 0.00 0.00 42.44 3.41
2479 2832 0.854062 TAACGTTCGGTGAAGTTGCG 59.146 50.000 2.82 0.00 0.00 4.85
2818 3191 1.227409 TCGTTGGCGAAGTTGCAGA 60.227 52.632 0.00 0.00 44.92 4.26
2886 3268 2.874019 CTGAGAGCACGCGAGACT 59.126 61.111 15.93 8.37 0.00 3.24
2915 3307 2.625823 AAACAATGGCGCGAGGTGG 61.626 57.895 12.10 0.00 0.00 4.61
2987 3382 4.699522 GAGGAACCCCGCGCAGTT 62.700 66.667 8.75 11.20 37.58 3.16
3025 3420 2.529389 AACTGGTCCCCGCTCCTT 60.529 61.111 0.00 0.00 0.00 3.36
3035 3430 4.814294 ATCCGCGCCGAACTGGTC 62.814 66.667 0.00 0.00 41.21 4.02
3052 3447 3.976701 GACCCGGACGTACCTCGGA 62.977 68.421 17.00 0.00 45.96 4.55
3124 3519 4.083324 TCGGTCTTCATTTGTCATTTGAGC 60.083 41.667 0.00 0.00 0.00 4.26
3152 3547 1.639298 GAATGAAGCCTTCACGCGCT 61.639 55.000 9.77 0.00 43.48 5.92
3160 3555 1.298859 GGCGTGACGAATGAAGCCTT 61.299 55.000 10.10 0.00 41.21 4.35
3177 3572 2.281484 TTTCCACTCAGCACCGGC 60.281 61.111 0.00 0.00 41.61 6.13
3178 3573 1.966451 GGTTTCCACTCAGCACCGG 60.966 63.158 0.00 0.00 0.00 5.28
3179 3574 0.951040 GAGGTTTCCACTCAGCACCG 60.951 60.000 0.00 0.00 35.09 4.94
3180 3575 0.398318 AGAGGTTTCCACTCAGCACC 59.602 55.000 0.00 0.00 37.43 5.01
3181 3576 2.262423 AAGAGGTTTCCACTCAGCAC 57.738 50.000 0.00 0.00 37.43 4.40
3182 3577 4.640771 AATAAGAGGTTTCCACTCAGCA 57.359 40.909 0.00 0.00 37.43 4.41
3183 3578 5.119694 CCTAATAAGAGGTTTCCACTCAGC 58.880 45.833 0.00 0.00 37.43 4.26
3184 3579 5.104735 AGCCTAATAAGAGGTTTCCACTCAG 60.105 44.000 0.00 0.00 39.02 3.35
3185 3580 4.783227 AGCCTAATAAGAGGTTTCCACTCA 59.217 41.667 0.00 0.00 39.02 3.41
3186 3581 5.119694 CAGCCTAATAAGAGGTTTCCACTC 58.880 45.833 0.00 0.00 39.02 3.51
3187 3582 4.080299 CCAGCCTAATAAGAGGTTTCCACT 60.080 45.833 0.00 0.00 39.02 4.00
3188 3583 4.200092 CCAGCCTAATAAGAGGTTTCCAC 58.800 47.826 0.00 0.00 39.02 4.02
3189 3584 3.850173 ACCAGCCTAATAAGAGGTTTCCA 59.150 43.478 0.00 0.00 39.02 3.53
3190 3585 4.080526 TGACCAGCCTAATAAGAGGTTTCC 60.081 45.833 0.00 0.00 39.02 3.13
3191 3586 5.099042 TGACCAGCCTAATAAGAGGTTTC 57.901 43.478 0.00 0.00 39.02 2.78
3192 3587 5.717119 ATGACCAGCCTAATAAGAGGTTT 57.283 39.130 0.00 0.00 39.02 3.27
3193 3588 5.905913 ACTATGACCAGCCTAATAAGAGGTT 59.094 40.000 0.00 0.00 39.02 3.50
3194 3589 5.305644 CACTATGACCAGCCTAATAAGAGGT 59.694 44.000 0.00 0.00 39.02 3.85
3195 3590 5.540337 TCACTATGACCAGCCTAATAAGAGG 59.460 44.000 0.00 0.00 39.88 3.69
3196 3591 6.295011 CCTCACTATGACCAGCCTAATAAGAG 60.295 46.154 0.00 0.00 0.00 2.85
3197 3592 5.540337 CCTCACTATGACCAGCCTAATAAGA 59.460 44.000 0.00 0.00 0.00 2.10
3198 3593 5.540337 TCCTCACTATGACCAGCCTAATAAG 59.460 44.000 0.00 0.00 0.00 1.73
3199 3594 5.464069 TCCTCACTATGACCAGCCTAATAA 58.536 41.667 0.00 0.00 0.00 1.40
3200 3595 5.074746 TCCTCACTATGACCAGCCTAATA 57.925 43.478 0.00 0.00 0.00 0.98
3201 3596 3.900601 CTCCTCACTATGACCAGCCTAAT 59.099 47.826 0.00 0.00 0.00 1.73
3202 3597 3.300388 CTCCTCACTATGACCAGCCTAA 58.700 50.000 0.00 0.00 0.00 2.69
3203 3598 2.245028 ACTCCTCACTATGACCAGCCTA 59.755 50.000 0.00 0.00 0.00 3.93
3204 3599 1.007721 ACTCCTCACTATGACCAGCCT 59.992 52.381 0.00 0.00 0.00 4.58
3205 3600 1.490574 ACTCCTCACTATGACCAGCC 58.509 55.000 0.00 0.00 0.00 4.85
3206 3601 3.702045 AGTTACTCCTCACTATGACCAGC 59.298 47.826 0.00 0.00 0.00 4.85
3207 3602 5.923733 AAGTTACTCCTCACTATGACCAG 57.076 43.478 0.00 0.00 0.00 4.00
3208 3603 6.602406 GTCTAAGTTACTCCTCACTATGACCA 59.398 42.308 0.00 0.00 0.00 4.02
3209 3604 6.829811 AGTCTAAGTTACTCCTCACTATGACC 59.170 42.308 0.00 0.00 31.22 4.02
3210 3605 7.868906 AGTCTAAGTTACTCCTCACTATGAC 57.131 40.000 0.00 0.00 0.00 3.06
3211 3606 8.770322 ACTAGTCTAAGTTACTCCTCACTATGA 58.230 37.037 0.00 0.00 0.00 2.15
3212 3607 8.967664 ACTAGTCTAAGTTACTCCTCACTATG 57.032 38.462 0.00 0.00 0.00 2.23
3214 3609 9.883142 GTTACTAGTCTAAGTTACTCCTCACTA 57.117 37.037 0.00 0.00 0.00 2.74
3215 3610 8.381636 TGTTACTAGTCTAAGTTACTCCTCACT 58.618 37.037 0.00 0.00 31.82 3.41
3216 3611 8.558973 TGTTACTAGTCTAAGTTACTCCTCAC 57.441 38.462 0.00 0.00 31.82 3.51
3217 3612 9.175312 CATGTTACTAGTCTAAGTTACTCCTCA 57.825 37.037 0.00 0.00 31.82 3.86
3218 3613 8.130469 GCATGTTACTAGTCTAAGTTACTCCTC 58.870 40.741 0.00 0.00 31.82 3.71
3219 3614 7.614583 TGCATGTTACTAGTCTAAGTTACTCCT 59.385 37.037 0.00 0.00 31.82 3.69
3220 3615 7.769220 TGCATGTTACTAGTCTAAGTTACTCC 58.231 38.462 0.00 0.00 31.82 3.85
3255 3650 9.168553 TCCACTATAGAGGTAGTAACATAGACT 57.831 37.037 14.95 0.00 33.29 3.24
3256 3651 9.962809 ATCCACTATAGAGGTAGTAACATAGAC 57.037 37.037 14.95 0.00 33.29 2.59
3283 3678 9.645059 GATGCATGACACTACATATATGTTACT 57.355 33.333 22.90 4.46 41.97 2.24
3284 3679 9.423061 TGATGCATGACACTACATATATGTTAC 57.577 33.333 22.90 10.80 41.97 2.50
3285 3680 9.423061 GTGATGCATGACACTACATATATGTTA 57.577 33.333 22.90 8.80 41.97 2.41
3286 3681 7.388776 GGTGATGCATGACACTACATATATGTT 59.611 37.037 22.90 5.58 36.13 2.71
3287 3682 6.875726 GGTGATGCATGACACTACATATATGT 59.124 38.462 21.57 21.57 37.91 2.29
3288 3683 7.101700 AGGTGATGCATGACACTACATATATG 58.898 38.462 18.25 11.29 37.22 1.78
3289 3684 7.250032 AGGTGATGCATGACACTACATATAT 57.750 36.000 18.25 0.00 37.22 0.86
3290 3685 6.570378 CGAGGTGATGCATGACACTACATATA 60.570 42.308 18.25 0.00 37.22 0.86
3291 3686 5.545588 GAGGTGATGCATGACACTACATAT 58.454 41.667 18.25 0.00 37.22 1.78
3292 3687 4.499696 CGAGGTGATGCATGACACTACATA 60.500 45.833 18.25 0.00 37.22 2.29
3293 3688 3.739209 CGAGGTGATGCATGACACTACAT 60.739 47.826 18.25 2.96 37.22 2.29
3294 3689 2.417243 CGAGGTGATGCATGACACTACA 60.417 50.000 18.25 0.00 37.22 2.74
3295 3690 2.196749 CGAGGTGATGCATGACACTAC 58.803 52.381 18.25 10.67 37.22 2.73
3296 3691 1.824852 ACGAGGTGATGCATGACACTA 59.175 47.619 18.25 0.00 37.22 2.74
3297 3692 0.610174 ACGAGGTGATGCATGACACT 59.390 50.000 18.25 12.11 37.22 3.55
3298 3693 1.442769 AACGAGGTGATGCATGACAC 58.557 50.000 18.25 13.59 36.44 3.67
3299 3694 2.183478 AAACGAGGTGATGCATGACA 57.817 45.000 18.25 0.90 0.00 3.58
3300 3695 4.882671 AATAAACGAGGTGATGCATGAC 57.117 40.909 2.46 5.60 0.00 3.06
3301 3696 5.670485 AGTAATAAACGAGGTGATGCATGA 58.330 37.500 2.46 0.00 0.00 3.07
3302 3697 5.991328 AGTAATAAACGAGGTGATGCATG 57.009 39.130 2.46 0.00 0.00 4.06
3303 3698 6.374333 ACAAAGTAATAAACGAGGTGATGCAT 59.626 34.615 0.00 0.00 0.00 3.96
3304 3699 5.703592 ACAAAGTAATAAACGAGGTGATGCA 59.296 36.000 0.00 0.00 0.00 3.96
3305 3700 6.178239 ACAAAGTAATAAACGAGGTGATGC 57.822 37.500 0.00 0.00 0.00 3.91
3306 3701 8.592998 GTCTACAAAGTAATAAACGAGGTGATG 58.407 37.037 0.00 0.00 0.00 3.07
3307 3702 8.529476 AGTCTACAAAGTAATAAACGAGGTGAT 58.471 33.333 0.00 0.00 0.00 3.06
3308 3703 7.889469 AGTCTACAAAGTAATAAACGAGGTGA 58.111 34.615 0.00 0.00 0.00 4.02
3309 3704 7.811236 TGAGTCTACAAAGTAATAAACGAGGTG 59.189 37.037 0.00 0.00 0.00 4.00
3310 3705 7.889469 TGAGTCTACAAAGTAATAAACGAGGT 58.111 34.615 0.00 0.00 0.00 3.85
3311 3706 8.928270 ATGAGTCTACAAAGTAATAAACGAGG 57.072 34.615 0.00 0.00 0.00 4.63
3319 3714 9.630098 CAATGCAAAATGAGTCTACAAAGTAAT 57.370 29.630 0.00 0.00 0.00 1.89
3320 3715 8.081633 CCAATGCAAAATGAGTCTACAAAGTAA 58.918 33.333 0.00 0.00 0.00 2.24
3321 3716 7.309133 CCCAATGCAAAATGAGTCTACAAAGTA 60.309 37.037 0.00 0.00 0.00 2.24
3322 3717 6.449698 CCAATGCAAAATGAGTCTACAAAGT 58.550 36.000 0.00 0.00 0.00 2.66
3323 3718 5.865552 CCCAATGCAAAATGAGTCTACAAAG 59.134 40.000 0.00 0.00 0.00 2.77
3324 3719 5.538053 TCCCAATGCAAAATGAGTCTACAAA 59.462 36.000 0.00 0.00 0.00 2.83
3325 3720 5.076182 TCCCAATGCAAAATGAGTCTACAA 58.924 37.500 0.00 0.00 0.00 2.41
3326 3721 4.661222 TCCCAATGCAAAATGAGTCTACA 58.339 39.130 0.00 0.00 0.00 2.74
3327 3722 5.402398 GTTCCCAATGCAAAATGAGTCTAC 58.598 41.667 0.00 0.00 0.00 2.59
3328 3723 4.462483 GGTTCCCAATGCAAAATGAGTCTA 59.538 41.667 0.00 0.00 0.00 2.59
3329 3724 3.259123 GGTTCCCAATGCAAAATGAGTCT 59.741 43.478 0.00 0.00 0.00 3.24
3330 3725 3.588955 GGTTCCCAATGCAAAATGAGTC 58.411 45.455 0.00 0.00 0.00 3.36
3331 3726 2.029110 CGGTTCCCAATGCAAAATGAGT 60.029 45.455 0.00 0.00 0.00 3.41
3332 3727 2.609350 CGGTTCCCAATGCAAAATGAG 58.391 47.619 0.00 0.00 0.00 2.90
3333 3728 1.337635 GCGGTTCCCAATGCAAAATGA 60.338 47.619 0.00 0.00 0.00 2.57
3334 3729 1.077915 GCGGTTCCCAATGCAAAATG 58.922 50.000 0.00 0.00 0.00 2.32
3335 3730 0.975887 AGCGGTTCCCAATGCAAAAT 59.024 45.000 0.00 0.00 0.00 1.82
3336 3731 1.621992 TAGCGGTTCCCAATGCAAAA 58.378 45.000 0.00 0.00 0.00 2.44
3337 3732 1.476085 CATAGCGGTTCCCAATGCAAA 59.524 47.619 0.00 0.00 0.00 3.68
3338 3733 1.102154 CATAGCGGTTCCCAATGCAA 58.898 50.000 0.00 0.00 0.00 4.08
3339 3734 0.034574 ACATAGCGGTTCCCAATGCA 60.035 50.000 0.00 0.00 0.00 3.96
3340 3735 0.381801 CACATAGCGGTTCCCAATGC 59.618 55.000 0.00 0.00 0.00 3.56
3341 3736 2.036958 TCACATAGCGGTTCCCAATG 57.963 50.000 0.00 0.00 0.00 2.82
3342 3737 2.575532 CATCACATAGCGGTTCCCAAT 58.424 47.619 0.00 0.00 0.00 3.16
3343 3738 1.408127 CCATCACATAGCGGTTCCCAA 60.408 52.381 0.00 0.00 0.00 4.12
3344 3739 0.180171 CCATCACATAGCGGTTCCCA 59.820 55.000 0.00 0.00 0.00 4.37
3345 3740 0.180406 ACCATCACATAGCGGTTCCC 59.820 55.000 0.00 0.00 0.00 3.97
3346 3741 2.870411 GTTACCATCACATAGCGGTTCC 59.130 50.000 0.00 0.00 32.81 3.62
3347 3742 3.527533 TGTTACCATCACATAGCGGTTC 58.472 45.455 0.00 0.00 32.81 3.62
3348 3743 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
3349 3744 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
3350 3745 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
3351 3746 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
3372 3767 9.973450 GAAGAGAGATGCAAATAGAGTAACATA 57.027 33.333 0.00 0.00 0.00 2.29
3373 3768 8.481314 TGAAGAGAGATGCAAATAGAGTAACAT 58.519 33.333 0.00 0.00 0.00 2.71
3374 3769 7.840931 TGAAGAGAGATGCAAATAGAGTAACA 58.159 34.615 0.00 0.00 0.00 2.41
3375 3770 8.885494 ATGAAGAGAGATGCAAATAGAGTAAC 57.115 34.615 0.00 0.00 0.00 2.50
3385 3780 9.671279 TCAAGTAATTAATGAAGAGAGATGCAA 57.329 29.630 0.00 0.00 0.00 4.08
3386 3781 9.102757 GTCAAGTAATTAATGAAGAGAGATGCA 57.897 33.333 0.00 0.00 0.00 3.96
3387 3782 9.102757 TGTCAAGTAATTAATGAAGAGAGATGC 57.897 33.333 4.30 0.00 0.00 3.91
3392 3787 9.942850 TGATGTGTCAAGTAATTAATGAAGAGA 57.057 29.630 4.30 0.00 0.00 3.10
3423 3818 6.035368 ACATACATGCCACATAAGCAAAAA 57.965 33.333 0.00 0.00 44.83 1.94
3424 3819 5.657826 ACATACATGCCACATAAGCAAAA 57.342 34.783 0.00 0.00 44.83 2.44
3425 3820 5.657826 AACATACATGCCACATAAGCAAA 57.342 34.783 0.00 0.00 44.83 3.68
3426 3821 5.885352 AGTAACATACATGCCACATAAGCAA 59.115 36.000 0.00 0.00 44.83 3.91
3427 3822 5.436175 AGTAACATACATGCCACATAAGCA 58.564 37.500 0.00 0.00 45.94 3.91
3428 3823 6.073222 GGTAGTAACATACATGCCACATAAGC 60.073 42.308 0.00 0.00 0.00 3.09
3429 3824 7.217200 AGGTAGTAACATACATGCCACATAAG 58.783 38.462 0.00 0.00 0.00 1.73
3430 3825 7.131907 AGGTAGTAACATACATGCCACATAA 57.868 36.000 0.00 0.00 0.00 1.90
3431 3826 6.740944 AGGTAGTAACATACATGCCACATA 57.259 37.500 0.00 0.00 0.00 2.29
3432 3827 5.630415 AGGTAGTAACATACATGCCACAT 57.370 39.130 0.00 0.00 0.00 3.21
3433 3828 6.099125 ACATAGGTAGTAACATACATGCCACA 59.901 38.462 0.00 0.00 0.00 4.17
3434 3829 6.522054 ACATAGGTAGTAACATACATGCCAC 58.478 40.000 0.00 0.00 0.00 5.01
3435 3830 6.740944 ACATAGGTAGTAACATACATGCCA 57.259 37.500 0.00 0.00 0.00 4.92
3436 3831 8.365647 AGTAACATAGGTAGTAACATACATGCC 58.634 37.037 0.00 0.00 0.00 4.40
3437 3832 9.408069 GAGTAACATAGGTAGTAACATACATGC 57.592 37.037 0.00 0.00 0.00 4.06
3438 3833 9.909644 GGAGTAACATAGGTAGTAACATACATG 57.090 37.037 0.00 0.00 0.00 3.21
3439 3834 9.086758 GGGAGTAACATAGGTAGTAACATACAT 57.913 37.037 0.00 0.00 0.00 2.29
3440 3835 8.060689 TGGGAGTAACATAGGTAGTAACATACA 58.939 37.037 0.00 0.00 0.00 2.29
3441 3836 8.355913 GTGGGAGTAACATAGGTAGTAACATAC 58.644 40.741 0.00 0.00 0.00 2.39
3442 3837 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
3443 3838 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
3444 3839 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
3445 3840 8.574737 CATAGTGGGAGTAACATAGGTAGTAAC 58.425 40.741 0.00 0.00 0.00 2.50
3446 3841 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
3447 3842 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
3448 3843 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
3449 3844 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
3450 3845 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
3451 3846 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
3452 3847 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
3453 3848 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
3454 3849 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
3455 3850 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
3456 3851 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
3457 3852 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
3458 3853 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
3459 3854 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
3460 3855 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
3461 3856 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
3462 3857 2.116238 GTAAGGCTGGTCATAGTGGGA 58.884 52.381 0.00 0.00 0.00 4.37
3463 3858 1.141053 GGTAAGGCTGGTCATAGTGGG 59.859 57.143 0.00 0.00 0.00 4.61
3464 3859 1.141053 GGGTAAGGCTGGTCATAGTGG 59.859 57.143 0.00 0.00 0.00 4.00
3465 3860 1.202533 CGGGTAAGGCTGGTCATAGTG 60.203 57.143 0.00 0.00 0.00 2.74
3466 3861 1.120530 CGGGTAAGGCTGGTCATAGT 58.879 55.000 0.00 0.00 0.00 2.12
3467 3862 1.120530 ACGGGTAAGGCTGGTCATAG 58.879 55.000 0.00 0.00 0.00 2.23
3468 3863 0.828022 CACGGGTAAGGCTGGTCATA 59.172 55.000 0.00 0.00 0.00 2.15
3469 3864 1.602237 CACGGGTAAGGCTGGTCAT 59.398 57.895 0.00 0.00 0.00 3.06
3470 3865 3.065306 CACGGGTAAGGCTGGTCA 58.935 61.111 0.00 0.00 0.00 4.02
3471 3866 2.436115 GCACGGGTAAGGCTGGTC 60.436 66.667 0.00 0.00 0.00 4.02
3472 3867 4.029809 GGCACGGGTAAGGCTGGT 62.030 66.667 0.00 0.00 0.00 4.00
3485 3880 0.108138 AACCATCTGTAGAGCGGCAC 60.108 55.000 1.45 0.00 0.00 5.01
3486 3881 0.175760 GAACCATCTGTAGAGCGGCA 59.824 55.000 1.45 0.00 0.00 5.69
3487 3882 0.461961 AGAACCATCTGTAGAGCGGC 59.538 55.000 0.00 0.00 33.59 6.53
3488 3883 1.067821 GGAGAACCATCTGTAGAGCGG 59.932 57.143 0.00 0.00 35.54 5.52
3489 3884 1.268794 CGGAGAACCATCTGTAGAGCG 60.269 57.143 0.00 0.00 35.54 5.03
3490 3885 2.025155 TCGGAGAACCATCTGTAGAGC 58.975 52.381 0.00 0.00 35.54 4.09
3491 3886 2.359531 GGTCGGAGAACCATCTGTAGAG 59.640 54.545 0.00 0.00 39.11 2.43
3492 3887 2.376109 GGTCGGAGAACCATCTGTAGA 58.624 52.381 0.00 0.00 39.11 2.59
3493 3888 2.873133 GGTCGGAGAACCATCTGTAG 57.127 55.000 0.00 0.00 39.11 2.74
3503 3898 5.446860 ACAGAGATACTATTGGTCGGAGAA 58.553 41.667 0.00 0.00 39.69 2.87
3504 3899 5.050126 ACAGAGATACTATTGGTCGGAGA 57.950 43.478 0.00 0.00 0.00 3.71
3505 3900 7.175119 TGAATACAGAGATACTATTGGTCGGAG 59.825 40.741 0.00 0.00 0.00 4.63
3506 3901 7.002276 TGAATACAGAGATACTATTGGTCGGA 58.998 38.462 0.00 0.00 0.00 4.55
3507 3902 7.215719 TGAATACAGAGATACTATTGGTCGG 57.784 40.000 0.00 0.00 0.00 4.79
3508 3903 8.135529 TGTTGAATACAGAGATACTATTGGTCG 58.864 37.037 0.00 0.00 31.68 4.79
3509 3904 9.250624 GTGTTGAATACAGAGATACTATTGGTC 57.749 37.037 0.00 0.00 37.45 4.02
3510 3905 8.758829 TGTGTTGAATACAGAGATACTATTGGT 58.241 33.333 0.00 0.00 37.45 3.67
3511 3906 9.770097 ATGTGTTGAATACAGAGATACTATTGG 57.230 33.333 0.57 0.00 37.45 3.16
3516 3911 9.950496 AAGAAATGTGTTGAATACAGAGATACT 57.050 29.630 0.57 0.00 37.45 2.12
3518 3913 9.942850 TGAAGAAATGTGTTGAATACAGAGATA 57.057 29.630 0.57 0.00 37.45 1.98
3519 3914 8.853077 TGAAGAAATGTGTTGAATACAGAGAT 57.147 30.769 0.57 0.00 37.45 2.75
3520 3915 8.853077 ATGAAGAAATGTGTTGAATACAGAGA 57.147 30.769 0.57 0.00 37.45 3.10
3521 3916 9.903682 AAATGAAGAAATGTGTTGAATACAGAG 57.096 29.630 0.57 0.00 37.45 3.35
3528 3923 9.515020 GTGACTTAAATGAAGAAATGTGTTGAA 57.485 29.630 0.00 0.00 38.65 2.69
3529 3924 8.902806 AGTGACTTAAATGAAGAAATGTGTTGA 58.097 29.630 0.00 0.00 38.65 3.18
3530 3925 8.961092 CAGTGACTTAAATGAAGAAATGTGTTG 58.039 33.333 0.00 0.00 38.65 3.33
3531 3926 8.686334 ACAGTGACTTAAATGAAGAAATGTGTT 58.314 29.630 0.00 0.00 38.65 3.32
3532 3927 8.225603 ACAGTGACTTAAATGAAGAAATGTGT 57.774 30.769 0.00 0.00 38.65 3.72
3539 3934 8.999431 GGTGAAATACAGTGACTTAAATGAAGA 58.001 33.333 0.00 0.00 38.65 2.87
3540 3935 8.783093 TGGTGAAATACAGTGACTTAAATGAAG 58.217 33.333 0.00 0.00 41.37 3.02
3541 3936 8.684386 TGGTGAAATACAGTGACTTAAATGAA 57.316 30.769 0.00 0.00 0.00 2.57
3542 3937 7.094805 GCTGGTGAAATACAGTGACTTAAATGA 60.095 37.037 0.00 0.00 37.07 2.57
3543 3938 7.023575 GCTGGTGAAATACAGTGACTTAAATG 58.976 38.462 0.00 0.00 37.07 2.32
3544 3939 6.942576 AGCTGGTGAAATACAGTGACTTAAAT 59.057 34.615 0.00 0.00 37.07 1.40
3545 3940 6.204688 CAGCTGGTGAAATACAGTGACTTAAA 59.795 38.462 5.57 0.00 37.07 1.52
3546 3941 5.700832 CAGCTGGTGAAATACAGTGACTTAA 59.299 40.000 5.57 0.00 37.07 1.85
3547 3942 5.237815 CAGCTGGTGAAATACAGTGACTTA 58.762 41.667 5.57 0.00 37.07 2.24
3548 3943 4.067896 CAGCTGGTGAAATACAGTGACTT 58.932 43.478 5.57 0.00 37.07 3.01
3549 3944 3.557898 CCAGCTGGTGAAATACAGTGACT 60.558 47.826 25.53 0.00 37.07 3.41
3550 3945 2.744202 CCAGCTGGTGAAATACAGTGAC 59.256 50.000 25.53 0.00 37.07 3.67
3551 3946 2.637382 TCCAGCTGGTGAAATACAGTGA 59.363 45.455 31.58 5.17 37.07 3.41
3552 3947 3.057969 TCCAGCTGGTGAAATACAGTG 57.942 47.619 31.58 1.87 37.07 3.66
3553 3948 3.370953 GGATCCAGCTGGTGAAATACAGT 60.371 47.826 31.58 6.65 37.07 3.55
3554 3949 3.209410 GGATCCAGCTGGTGAAATACAG 58.791 50.000 31.58 2.64 37.76 2.74
3555 3950 2.092429 GGGATCCAGCTGGTGAAATACA 60.092 50.000 31.58 10.93 36.34 2.29
3556 3951 2.092429 TGGGATCCAGCTGGTGAAATAC 60.092 50.000 31.58 18.30 36.34 1.89
3557 3952 2.092429 GTGGGATCCAGCTGGTGAAATA 60.092 50.000 31.58 12.54 32.34 1.40
3558 3953 1.002069 TGGGATCCAGCTGGTGAAAT 58.998 50.000 31.58 18.22 36.34 2.17
3559 3954 0.038166 GTGGGATCCAGCTGGTGAAA 59.962 55.000 31.58 13.76 32.34 2.69
3560 3955 1.685224 GTGGGATCCAGCTGGTGAA 59.315 57.895 31.58 14.17 32.34 3.18
3561 3956 3.403624 GTGGGATCCAGCTGGTGA 58.596 61.111 31.58 14.98 32.34 4.02
3568 3963 1.626356 ATCACGTGGGTGGGATCCAG 61.626 60.000 17.00 0.00 44.50 3.86
3569 3964 1.204786 AATCACGTGGGTGGGATCCA 61.205 55.000 17.00 0.00 44.50 3.41
3570 3965 0.034477 AAATCACGTGGGTGGGATCC 60.034 55.000 17.00 1.92 44.50 3.36
3571 3966 1.094785 CAAATCACGTGGGTGGGATC 58.905 55.000 17.00 0.00 44.50 3.36
3572 3967 0.695924 TCAAATCACGTGGGTGGGAT 59.304 50.000 17.00 0.00 44.50 3.85
3573 3968 0.250553 GTCAAATCACGTGGGTGGGA 60.251 55.000 17.00 4.79 44.50 4.37
3574 3969 1.241315 GGTCAAATCACGTGGGTGGG 61.241 60.000 17.00 2.31 44.50 4.61
3575 3970 0.536233 TGGTCAAATCACGTGGGTGG 60.536 55.000 17.00 1.30 44.50 4.61
3576 3971 0.874390 CTGGTCAAATCACGTGGGTG 59.126 55.000 17.00 11.35 45.78 4.61
3577 3972 0.889186 GCTGGTCAAATCACGTGGGT 60.889 55.000 17.00 1.69 0.00 4.51
3578 3973 0.606401 AGCTGGTCAAATCACGTGGG 60.606 55.000 17.00 3.43 0.00 4.61
3579 3974 0.518636 CAGCTGGTCAAATCACGTGG 59.481 55.000 17.00 0.00 0.00 4.94
3580 3975 0.518636 CCAGCTGGTCAAATCACGTG 59.481 55.000 25.53 9.94 0.00 4.49
3581 3976 0.396435 TCCAGCTGGTCAAATCACGT 59.604 50.000 31.58 0.00 36.34 4.49
3582 3977 0.798776 GTCCAGCTGGTCAAATCACG 59.201 55.000 31.58 2.64 36.34 4.35
3583 3978 1.168714 GGTCCAGCTGGTCAAATCAC 58.831 55.000 31.58 19.85 36.34 3.06
3584 3979 1.067295 AGGTCCAGCTGGTCAAATCA 58.933 50.000 31.58 8.42 36.34 2.57
3585 3980 2.633488 GTAGGTCCAGCTGGTCAAATC 58.367 52.381 31.58 13.52 36.34 2.17
3586 3981 1.282157 GGTAGGTCCAGCTGGTCAAAT 59.718 52.381 31.58 17.59 36.34 2.32
3587 3982 0.690762 GGTAGGTCCAGCTGGTCAAA 59.309 55.000 31.58 15.13 36.34 2.69
3588 3983 0.178903 AGGTAGGTCCAGCTGGTCAA 60.179 55.000 31.58 15.49 39.02 3.18
3589 3984 0.708209 TAGGTAGGTCCAGCTGGTCA 59.292 55.000 31.58 11.73 39.02 4.02
3590 3985 1.112950 GTAGGTAGGTCCAGCTGGTC 58.887 60.000 31.58 25.87 39.02 4.02
3591 3986 0.683504 CGTAGGTAGGTCCAGCTGGT 60.684 60.000 31.58 16.00 39.02 4.00
3592 3987 2.017559 GCGTAGGTAGGTCCAGCTGG 62.018 65.000 27.87 27.87 39.02 4.85
3593 3988 1.437986 GCGTAGGTAGGTCCAGCTG 59.562 63.158 6.78 6.78 39.02 4.24
3594 3989 2.119655 CGCGTAGGTAGGTCCAGCT 61.120 63.158 0.00 0.00 39.02 4.24
3595 3990 1.453762 ATCGCGTAGGTAGGTCCAGC 61.454 60.000 5.77 0.00 39.02 4.85
3596 3991 1.030457 AATCGCGTAGGTAGGTCCAG 58.970 55.000 5.77 0.00 39.02 3.86
3597 3992 1.406539 GAAATCGCGTAGGTAGGTCCA 59.593 52.381 5.77 0.00 39.02 4.02
3598 3993 1.406539 TGAAATCGCGTAGGTAGGTCC 59.593 52.381 5.77 0.00 0.00 4.46
3599 3994 2.098770 ACTGAAATCGCGTAGGTAGGTC 59.901 50.000 5.77 0.00 0.00 3.85
3600 3995 2.097825 ACTGAAATCGCGTAGGTAGGT 58.902 47.619 5.77 0.00 0.00 3.08
3601 3996 2.098607 TGACTGAAATCGCGTAGGTAGG 59.901 50.000 5.77 0.00 0.00 3.18
3602 3997 3.416119 TGACTGAAATCGCGTAGGTAG 57.584 47.619 5.77 3.41 0.00 3.18
3603 3998 3.129813 ACATGACTGAAATCGCGTAGGTA 59.870 43.478 5.77 0.00 0.00 3.08
3604 3999 2.094182 ACATGACTGAAATCGCGTAGGT 60.094 45.455 5.77 0.00 0.00 3.08
3605 4000 2.535984 GACATGACTGAAATCGCGTAGG 59.464 50.000 5.77 0.00 0.00 3.18
3606 4001 2.535984 GGACATGACTGAAATCGCGTAG 59.464 50.000 5.77 0.77 0.00 3.51
3607 4002 2.536365 GGACATGACTGAAATCGCGTA 58.464 47.619 5.77 0.00 0.00 4.42
3608 4003 1.359848 GGACATGACTGAAATCGCGT 58.640 50.000 5.77 0.00 0.00 6.01
3609 4004 0.652592 GGGACATGACTGAAATCGCG 59.347 55.000 0.00 0.00 0.00 5.87
3610 4005 1.936547 GAGGGACATGACTGAAATCGC 59.063 52.381 0.00 0.00 0.00 4.58
3611 4006 2.196749 CGAGGGACATGACTGAAATCG 58.803 52.381 0.00 0.00 0.00 3.34
3612 4007 1.936547 GCGAGGGACATGACTGAAATC 59.063 52.381 0.00 0.00 0.00 2.17
3613 4008 1.556911 AGCGAGGGACATGACTGAAAT 59.443 47.619 0.00 0.00 0.00 2.17
3614 4009 0.976641 AGCGAGGGACATGACTGAAA 59.023 50.000 0.00 0.00 0.00 2.69
3615 4010 0.976641 AAGCGAGGGACATGACTGAA 59.023 50.000 0.00 0.00 0.00 3.02
3616 4011 0.976641 AAAGCGAGGGACATGACTGA 59.023 50.000 0.00 0.00 0.00 3.41
3617 4012 2.271800 GTAAAGCGAGGGACATGACTG 58.728 52.381 0.00 0.00 0.00 3.51
3618 4013 1.899814 TGTAAAGCGAGGGACATGACT 59.100 47.619 0.00 0.00 0.00 3.41
3619 4014 2.000447 GTGTAAAGCGAGGGACATGAC 59.000 52.381 0.00 0.00 0.00 3.06
3620 4015 1.621317 TGTGTAAAGCGAGGGACATGA 59.379 47.619 0.00 0.00 0.00 3.07
3621 4016 1.732259 GTGTGTAAAGCGAGGGACATG 59.268 52.381 0.00 0.00 0.00 3.21
3622 4017 1.623811 AGTGTGTAAAGCGAGGGACAT 59.376 47.619 0.00 0.00 0.00 3.06
3623 4018 1.045407 AGTGTGTAAAGCGAGGGACA 58.955 50.000 0.00 0.00 0.00 4.02
3624 4019 2.877335 CTAGTGTGTAAAGCGAGGGAC 58.123 52.381 0.00 0.00 0.00 4.46
3625 4020 1.203994 GCTAGTGTGTAAAGCGAGGGA 59.796 52.381 0.00 0.00 0.00 4.20
3626 4021 1.067142 TGCTAGTGTGTAAAGCGAGGG 60.067 52.381 0.00 0.00 39.14 4.30
3627 4022 2.363788 TGCTAGTGTGTAAAGCGAGG 57.636 50.000 0.00 0.00 39.14 4.63
3628 4023 3.980238 CTTGCTAGTGTGTAAAGCGAG 57.020 47.619 0.00 0.00 40.42 5.03
3629 4024 3.057019 CACTTGCTAGTGTGTAAAGCGA 58.943 45.455 18.65 0.00 45.46 4.93
3630 4025 3.439932 CACTTGCTAGTGTGTAAAGCG 57.560 47.619 18.65 0.00 45.46 4.68
3657 4052 0.965014 GACGTTAAACATGCGTTGCG 59.035 50.000 0.00 0.35 39.06 4.85
3658 4053 2.309898 AGACGTTAAACATGCGTTGC 57.690 45.000 0.00 0.00 39.06 4.17
3659 4054 3.657625 GTCAAGACGTTAAACATGCGTTG 59.342 43.478 0.00 0.00 39.06 4.10
3660 4055 3.558418 AGTCAAGACGTTAAACATGCGTT 59.442 39.130 0.00 0.00 39.06 4.84
3661 4056 3.128349 AGTCAAGACGTTAAACATGCGT 58.872 40.909 0.00 0.00 41.81 5.24
3662 4057 3.788434 AGTCAAGACGTTAAACATGCG 57.212 42.857 0.00 0.00 36.20 4.73
3669 4064 9.075519 CGGTTGTAATATTAGTCAAGACGTTAA 57.924 33.333 0.00 0.00 36.20 2.01
3670 4065 7.701924 CCGGTTGTAATATTAGTCAAGACGTTA 59.298 37.037 14.69 0.00 36.20 3.18
3671 4066 6.532657 CCGGTTGTAATATTAGTCAAGACGTT 59.467 38.462 14.69 0.00 36.20 3.99
3672 4067 6.038356 CCGGTTGTAATATTAGTCAAGACGT 58.962 40.000 14.69 0.00 36.20 4.34
3673 4068 6.267817 TCCGGTTGTAATATTAGTCAAGACG 58.732 40.000 0.00 5.86 36.20 4.18
3674 4069 9.924650 ATATCCGGTTGTAATATTAGTCAAGAC 57.075 33.333 0.00 0.00 0.00 3.01
3675 4070 9.923143 CATATCCGGTTGTAATATTAGTCAAGA 57.077 33.333 0.00 0.00 0.00 3.02
3676 4071 9.923143 TCATATCCGGTTGTAATATTAGTCAAG 57.077 33.333 0.00 0.00 0.00 3.02
3677 4072 9.923143 CTCATATCCGGTTGTAATATTAGTCAA 57.077 33.333 0.00 0.00 0.00 3.18
3678 4073 9.304335 TCTCATATCCGGTTGTAATATTAGTCA 57.696 33.333 0.00 0.00 0.00 3.41
3688 4083 9.378551 GCATATTAATTCTCATATCCGGTTGTA 57.621 33.333 0.00 0.00 0.00 2.41
3689 4084 7.882791 TGCATATTAATTCTCATATCCGGTTGT 59.117 33.333 0.00 0.00 0.00 3.32
3690 4085 8.267620 TGCATATTAATTCTCATATCCGGTTG 57.732 34.615 0.00 0.00 0.00 3.77
3692 4087 9.770097 CTATGCATATTAATTCTCATATCCGGT 57.230 33.333 6.92 0.00 0.00 5.28
3693 4088 9.987272 TCTATGCATATTAATTCTCATATCCGG 57.013 33.333 6.92 0.00 0.00 5.14
3719 4114 8.516234 GCCCGGTTGGAAAATAAAAATATTTTT 58.484 29.630 25.18 25.18 39.09 1.94
3720 4115 7.885922 AGCCCGGTTGGAAAATAAAAATATTTT 59.114 29.630 7.64 7.64 40.97 1.82
3721 4116 7.398829 AGCCCGGTTGGAAAATAAAAATATTT 58.601 30.769 0.00 0.00 37.49 1.40
3722 4117 6.953101 AGCCCGGTTGGAAAATAAAAATATT 58.047 32.000 0.00 0.00 37.49 1.28
3723 4118 6.382859 AGAGCCCGGTTGGAAAATAAAAATAT 59.617 34.615 0.00 0.00 37.49 1.28
3724 4119 5.717654 AGAGCCCGGTTGGAAAATAAAAATA 59.282 36.000 0.00 0.00 37.49 1.40
3725 4120 4.530553 AGAGCCCGGTTGGAAAATAAAAAT 59.469 37.500 0.00 0.00 37.49 1.82
3731 4126 0.404040 TGAGAGCCCGGTTGGAAAAT 59.596 50.000 0.00 0.00 37.49 1.82
4585 4982 1.062525 GCGCATTAGAAACTGGCCG 59.937 57.895 0.30 0.00 0.00 6.13
4648 5045 9.586435 CCTATTCCGCTGAAAATTAAGATTTTT 57.414 29.630 0.00 0.00 43.61 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.