Multiple sequence alignment - TraesCS1B01G248700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G248700 chr1B 100.000 3924 0 0 1 3924 439844500 439848423 0.000000e+00 7247.0
1 TraesCS1B01G248700 chr1D 97.427 3498 56 13 1 3465 326284736 326288232 0.000000e+00 5930.0
2 TraesCS1B01G248700 chr1D 93.878 49 2 1 2959 3007 488481849 488481896 5.440000e-09 73.1
3 TraesCS1B01G248700 chr1A 96.817 3487 70 15 1 3465 412457415 412460882 0.000000e+00 5786.0
4 TraesCS1B01G248700 chr7B 99.353 464 3 0 3461 3924 700429393 700429856 0.000000e+00 841.0
5 TraesCS1B01G248700 chr7B 99.138 464 4 0 3461 3924 432902694 432902231 0.000000e+00 835.0
6 TraesCS1B01G248700 chr6B 99.353 464 3 0 3461 3924 412159708 412160171 0.000000e+00 841.0
7 TraesCS1B01G248700 chr4B 99.353 464 3 0 3461 3924 654772015 654772478 0.000000e+00 841.0
8 TraesCS1B01G248700 chr4B 99.138 464 4 0 3461 3924 48330019 48329556 0.000000e+00 835.0
9 TraesCS1B01G248700 chr4A 99.353 464 3 0 3461 3924 578157009 578156546 0.000000e+00 841.0
10 TraesCS1B01G248700 chr3B 99.353 464 3 0 3461 3924 53351957 53351494 0.000000e+00 841.0
11 TraesCS1B01G248700 chr3B 94.231 52 3 0 2962 3013 597475715 597475664 3.250000e-11 80.5
12 TraesCS1B01G248700 chr7A 99.138 464 4 0 3461 3924 572573787 572573324 0.000000e+00 835.0
13 TraesCS1B01G248700 chr5A 99.138 464 4 0 3461 3924 412523893 412524356 0.000000e+00 835.0
14 TraesCS1B01G248700 chr5B 94.118 51 1 2 2960 3008 626039904 626039854 4.200000e-10 76.8
15 TraesCS1B01G248700 chr5B 87.879 66 5 3 2943 3008 440281756 440281818 1.510000e-09 75.0
16 TraesCS1B01G248700 chr4D 90.164 61 2 3 2955 3015 47511191 47511135 4.200000e-10 76.8
17 TraesCS1B01G248700 chr3A 89.831 59 4 2 2952 3008 446318004 446317946 1.510000e-09 75.0
18 TraesCS1B01G248700 chr3D 92.308 52 2 1 2959 3010 329605877 329605926 5.440000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G248700 chr1B 439844500 439848423 3923 False 7247 7247 100.000 1 3924 1 chr1B.!!$F1 3923
1 TraesCS1B01G248700 chr1D 326284736 326288232 3496 False 5930 5930 97.427 1 3465 1 chr1D.!!$F1 3464
2 TraesCS1B01G248700 chr1A 412457415 412460882 3467 False 5786 5786 96.817 1 3465 1 chr1A.!!$F1 3464

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
539 546 2.161855 TGTTTCATCTGTGCCATGTCC 58.838 47.619 0.00 0.0 0.0 4.02 F
1131 1145 0.609131 CCCTTGACGGCCATTTCAGT 60.609 55.000 2.24 0.0 0.0 3.41 F
1179 1193 1.122019 ACTTCGGCAACCTCTCCAGT 61.122 55.000 0.00 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 1684 2.205022 TCACCTCTTCCTGCATTTGG 57.795 50.000 0.00 0.0 0.00 3.28 R
2650 2693 0.722676 AGGGTAGGAATCCCACCAGA 59.277 55.000 18.31 0.0 46.82 3.86 R
3056 3105 2.285950 TGTTTTTCACGCTACAGTTCGC 60.286 45.455 0.00 0.0 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 99 3.327757 GCCTAGGTGATCCATGTCCATAA 59.672 47.826 11.31 0.00 35.89 1.90
222 225 8.864024 CGATATACATGTCTGCGAAAATAGATT 58.136 33.333 0.00 0.00 0.00 2.40
476 479 5.423290 TCAGAAGTTCAATCCTGCTGAGATA 59.577 40.000 5.50 0.00 39.26 1.98
517 524 7.986085 AAATATCTGTGTCTGTTAACTGCTT 57.014 32.000 7.22 0.00 0.00 3.91
529 536 6.203530 TCTGTTAACTGCTTCTGTTTCATCTG 59.796 38.462 7.22 0.00 0.00 2.90
539 546 2.161855 TGTTTCATCTGTGCCATGTCC 58.838 47.619 0.00 0.00 0.00 4.02
648 662 2.834549 CCTCCATACACTTCCTGACAGT 59.165 50.000 0.93 0.00 0.00 3.55
745 759 8.481974 TGCAACATAATCTTTGATCCAAATTG 57.518 30.769 0.00 0.00 32.70 2.32
1131 1145 0.609131 CCCTTGACGGCCATTTCAGT 60.609 55.000 2.24 0.00 0.00 3.41
1179 1193 1.122019 ACTTCGGCAACCTCTCCAGT 61.122 55.000 0.00 0.00 0.00 4.00
1290 1304 3.233980 ACAGTGGCAGCTCGTGGA 61.234 61.111 0.00 0.00 0.00 4.02
1353 1367 5.133999 AGGGATTGTCATCAGAATGGAATCT 59.866 40.000 0.00 0.00 35.10 2.40
1670 1684 6.374333 TGTGGCTAACTTTCTACCATGATTTC 59.626 38.462 0.00 0.00 31.99 2.17
2533 2550 6.602009 AGTCCAGGTAAATTGCTTTATGTACC 59.398 38.462 0.00 0.00 38.27 3.34
2650 2693 8.207545 GTCATACCAGATGAGGAAGTTTTCTAT 58.792 37.037 0.00 0.00 0.00 1.98
2777 2820 6.456988 GGTGAAGCAATATCTTCCAAACTACG 60.457 42.308 2.61 0.00 41.23 3.51
3073 3122 2.710220 TAGCGAACTGTAGCGTGAAA 57.290 45.000 0.00 0.00 38.61 2.69
3345 3394 2.979678 AGAAAAGGCTGGTCTCAGGTAA 59.020 45.455 0.00 0.00 41.19 2.85
3465 3514 0.676466 TGTATTGGTGCAGGAAGCCG 60.676 55.000 0.00 0.00 44.83 5.52
3466 3515 1.077787 TATTGGTGCAGGAAGCCGG 60.078 57.895 0.00 0.00 44.83 6.13
3467 3516 1.558167 TATTGGTGCAGGAAGCCGGA 61.558 55.000 5.05 0.00 44.83 5.14
3468 3517 2.215451 ATTGGTGCAGGAAGCCGGAT 62.215 55.000 5.05 0.00 44.83 4.18
3469 3518 2.825836 GGTGCAGGAAGCCGGATG 60.826 66.667 5.05 0.00 44.83 3.51
3470 3519 2.825836 GTGCAGGAAGCCGGATGG 60.826 66.667 5.05 0.00 44.83 3.51
3471 3520 3.008517 TGCAGGAAGCCGGATGGA 61.009 61.111 5.05 0.00 44.83 3.41
3472 3521 2.377810 TGCAGGAAGCCGGATGGAT 61.378 57.895 5.05 0.00 44.83 3.41
3473 3522 1.895707 GCAGGAAGCCGGATGGATG 60.896 63.158 5.05 0.00 37.49 3.51
3474 3523 1.832219 CAGGAAGCCGGATGGATGA 59.168 57.895 5.05 0.00 37.49 2.92
3475 3524 0.181114 CAGGAAGCCGGATGGATGAA 59.819 55.000 5.05 0.00 37.49 2.57
3476 3525 0.471617 AGGAAGCCGGATGGATGAAG 59.528 55.000 5.05 0.00 37.49 3.02
3477 3526 1.169034 GGAAGCCGGATGGATGAAGC 61.169 60.000 5.05 0.00 37.49 3.86
3478 3527 1.502163 GAAGCCGGATGGATGAAGCG 61.502 60.000 5.05 0.00 37.49 4.68
3479 3528 2.947938 AAGCCGGATGGATGAAGCGG 62.948 60.000 5.05 0.00 37.49 5.52
3480 3529 2.974698 CCGGATGGATGAAGCGGC 60.975 66.667 0.00 0.00 37.49 6.53
3481 3530 3.341043 CGGATGGATGAAGCGGCG 61.341 66.667 0.51 0.51 0.00 6.46
3482 3531 3.654020 GGATGGATGAAGCGGCGC 61.654 66.667 26.86 26.86 0.00 6.53
3483 3532 3.654020 GATGGATGAAGCGGCGCC 61.654 66.667 30.40 19.07 0.00 6.53
3484 3533 4.488136 ATGGATGAAGCGGCGCCA 62.488 61.111 30.40 21.05 0.00 5.69
3485 3534 3.993614 ATGGATGAAGCGGCGCCAA 62.994 57.895 30.40 15.16 31.53 4.52
3486 3535 3.880846 GGATGAAGCGGCGCCAAG 61.881 66.667 30.40 12.69 0.00 3.61
3501 3550 2.125773 CCAAGCTTCTGGCATTCTCT 57.874 50.000 0.00 0.00 44.79 3.10
3502 3551 1.743958 CCAAGCTTCTGGCATTCTCTG 59.256 52.381 0.00 0.00 44.79 3.35
3503 3552 2.434428 CAAGCTTCTGGCATTCTCTGT 58.566 47.619 0.00 0.00 44.79 3.41
3504 3553 2.110901 AGCTTCTGGCATTCTCTGTG 57.889 50.000 0.00 0.00 44.79 3.66
3505 3554 1.627329 AGCTTCTGGCATTCTCTGTGA 59.373 47.619 0.00 0.00 44.79 3.58
3506 3555 1.736681 GCTTCTGGCATTCTCTGTGAC 59.263 52.381 0.00 0.00 41.35 3.67
3507 3556 2.873245 GCTTCTGGCATTCTCTGTGACA 60.873 50.000 0.00 0.00 41.35 3.58
3508 3557 3.405831 CTTCTGGCATTCTCTGTGACAA 58.594 45.455 0.00 0.00 33.42 3.18
3509 3558 3.049708 TCTGGCATTCTCTGTGACAAG 57.950 47.619 0.00 0.00 33.42 3.16
3510 3559 2.634453 TCTGGCATTCTCTGTGACAAGA 59.366 45.455 0.00 0.00 33.42 3.02
3511 3560 3.001414 CTGGCATTCTCTGTGACAAGAG 58.999 50.000 5.92 5.92 44.34 2.85
3517 3566 1.615883 TCTCTGTGACAAGAGAGTGCC 59.384 52.381 9.61 0.00 46.13 5.01
3518 3567 1.342496 CTCTGTGACAAGAGAGTGCCA 59.658 52.381 6.29 0.00 45.59 4.92
3519 3568 1.069204 TCTGTGACAAGAGAGTGCCAC 59.931 52.381 0.00 0.00 0.00 5.01
3520 3569 0.829990 TGTGACAAGAGAGTGCCACA 59.170 50.000 0.00 0.00 32.87 4.17
3521 3570 1.209261 TGTGACAAGAGAGTGCCACAA 59.791 47.619 0.00 0.00 32.44 3.33
3522 3571 2.288666 GTGACAAGAGAGTGCCACAAA 58.711 47.619 0.00 0.00 0.00 2.83
3523 3572 2.682856 GTGACAAGAGAGTGCCACAAAA 59.317 45.455 0.00 0.00 0.00 2.44
3524 3573 2.945008 TGACAAGAGAGTGCCACAAAAG 59.055 45.455 0.00 0.00 0.00 2.27
3525 3574 1.678101 ACAAGAGAGTGCCACAAAAGC 59.322 47.619 0.00 0.00 0.00 3.51
3526 3575 1.952296 CAAGAGAGTGCCACAAAAGCT 59.048 47.619 0.00 0.00 0.00 3.74
3527 3576 3.141398 CAAGAGAGTGCCACAAAAGCTA 58.859 45.455 0.00 0.00 0.00 3.32
3528 3577 3.492102 AGAGAGTGCCACAAAAGCTAA 57.508 42.857 0.00 0.00 0.00 3.09
3529 3578 3.820557 AGAGAGTGCCACAAAAGCTAAA 58.179 40.909 0.00 0.00 0.00 1.85
3530 3579 4.207165 AGAGAGTGCCACAAAAGCTAAAA 58.793 39.130 0.00 0.00 0.00 1.52
3531 3580 4.276926 AGAGAGTGCCACAAAAGCTAAAAG 59.723 41.667 0.00 0.00 0.00 2.27
3532 3581 3.319122 AGAGTGCCACAAAAGCTAAAAGG 59.681 43.478 0.00 0.00 0.00 3.11
3533 3582 2.135139 GTGCCACAAAAGCTAAAAGGC 58.865 47.619 9.43 9.43 40.93 4.35
3534 3583 2.524569 GCCACAAAAGCTAAAAGGCA 57.475 45.000 10.99 0.00 40.29 4.75
3535 3584 2.169352 TGCCACAAAAGCTAAAAGGCAA 59.831 40.909 14.90 2.62 46.55 4.52
3536 3585 2.802247 GCCACAAAAGCTAAAAGGCAAG 59.198 45.455 10.99 0.00 40.29 4.01
3537 3586 3.741075 GCCACAAAAGCTAAAAGGCAAGT 60.741 43.478 10.99 0.00 40.29 3.16
3538 3587 4.441792 CCACAAAAGCTAAAAGGCAAGTT 58.558 39.130 0.00 0.00 34.17 2.66
3539 3588 4.507756 CCACAAAAGCTAAAAGGCAAGTTC 59.492 41.667 0.00 0.00 34.17 3.01
3540 3589 5.351458 CACAAAAGCTAAAAGGCAAGTTCT 58.649 37.500 0.00 0.00 34.17 3.01
3541 3590 6.460953 CCACAAAAGCTAAAAGGCAAGTTCTA 60.461 38.462 0.00 0.00 34.17 2.10
3542 3591 6.417930 CACAAAAGCTAAAAGGCAAGTTCTAC 59.582 38.462 0.00 0.00 34.17 2.59
3543 3592 6.096282 ACAAAAGCTAAAAGGCAAGTTCTACA 59.904 34.615 0.00 0.00 34.17 2.74
3544 3593 5.948992 AAGCTAAAAGGCAAGTTCTACAG 57.051 39.130 0.00 0.00 34.17 2.74
3545 3594 4.327680 AGCTAAAAGGCAAGTTCTACAGG 58.672 43.478 0.00 0.00 34.17 4.00
3546 3595 4.041691 AGCTAAAAGGCAAGTTCTACAGGA 59.958 41.667 0.00 0.00 34.17 3.86
3547 3596 4.154375 GCTAAAAGGCAAGTTCTACAGGAC 59.846 45.833 0.00 0.00 0.00 3.85
3548 3597 2.457366 AAGGCAAGTTCTACAGGACG 57.543 50.000 0.00 0.00 0.00 4.79
3549 3598 0.608640 AGGCAAGTTCTACAGGACGG 59.391 55.000 0.00 0.00 0.00 4.79
3550 3599 1.019805 GGCAAGTTCTACAGGACGGC 61.020 60.000 0.00 0.00 0.00 5.68
3551 3600 1.352156 GCAAGTTCTACAGGACGGCG 61.352 60.000 4.80 4.80 0.00 6.46
3552 3601 0.736325 CAAGTTCTACAGGACGGCGG 60.736 60.000 13.24 0.00 0.00 6.13
3553 3602 1.183676 AAGTTCTACAGGACGGCGGT 61.184 55.000 13.24 0.00 0.00 5.68
3554 3603 1.183676 AGTTCTACAGGACGGCGGTT 61.184 55.000 13.24 0.00 0.00 4.44
3555 3604 0.735287 GTTCTACAGGACGGCGGTTC 60.735 60.000 13.24 0.00 0.00 3.62
3556 3605 2.202570 CTACAGGACGGCGGTTCG 60.203 66.667 13.24 0.00 0.00 3.95
3557 3606 2.672651 TACAGGACGGCGGTTCGA 60.673 61.111 13.24 0.00 0.00 3.71
3558 3607 2.862347 CTACAGGACGGCGGTTCGAC 62.862 65.000 13.24 0.00 0.00 4.20
3567 3616 2.740826 CGGTTCGACCCGCAATGT 60.741 61.111 8.96 0.00 41.78 2.71
3568 3617 2.322081 CGGTTCGACCCGCAATGTT 61.322 57.895 8.96 0.00 41.78 2.71
3569 3618 1.209127 GGTTCGACCCGCAATGTTG 59.791 57.895 0.00 0.00 30.04 3.33
3570 3619 1.512156 GGTTCGACCCGCAATGTTGT 61.512 55.000 0.00 0.00 30.04 3.32
3571 3620 1.149987 GTTCGACCCGCAATGTTGTA 58.850 50.000 0.00 0.00 0.00 2.41
3572 3621 1.735571 GTTCGACCCGCAATGTTGTAT 59.264 47.619 0.00 0.00 0.00 2.29
3573 3622 1.364721 TCGACCCGCAATGTTGTATG 58.635 50.000 0.00 0.00 0.00 2.39
3574 3623 0.376852 CGACCCGCAATGTTGTATGG 59.623 55.000 0.00 0.00 0.00 2.74
3575 3624 0.100503 GACCCGCAATGTTGTATGGC 59.899 55.000 0.00 0.00 0.00 4.40
3576 3625 1.063972 CCCGCAATGTTGTATGGCG 59.936 57.895 1.84 1.84 46.61 5.69
3577 3626 1.586042 CCGCAATGTTGTATGGCGC 60.586 57.895 0.00 0.00 45.78 6.53
3578 3627 1.429021 CGCAATGTTGTATGGCGCT 59.571 52.632 7.64 0.00 41.27 5.92
3579 3628 0.862701 CGCAATGTTGTATGGCGCTG 60.863 55.000 7.64 0.00 41.27 5.18
3580 3629 0.451383 GCAATGTTGTATGGCGCTGA 59.549 50.000 7.64 0.00 0.00 4.26
3581 3630 1.532505 GCAATGTTGTATGGCGCTGAG 60.533 52.381 7.64 0.00 0.00 3.35
3582 3631 1.739466 CAATGTTGTATGGCGCTGAGT 59.261 47.619 7.64 0.00 0.00 3.41
3583 3632 1.372582 ATGTTGTATGGCGCTGAGTG 58.627 50.000 7.64 0.00 0.00 3.51
3584 3633 0.034756 TGTTGTATGGCGCTGAGTGT 59.965 50.000 7.64 0.00 0.00 3.55
3585 3634 1.156736 GTTGTATGGCGCTGAGTGTT 58.843 50.000 7.64 0.00 0.00 3.32
3586 3635 1.135972 GTTGTATGGCGCTGAGTGTTG 60.136 52.381 7.64 0.00 0.00 3.33
3587 3636 0.673333 TGTATGGCGCTGAGTGTTGG 60.673 55.000 7.64 0.00 0.00 3.77
3588 3637 1.745115 TATGGCGCTGAGTGTTGGC 60.745 57.895 7.64 0.00 0.00 4.52
3592 3641 3.414700 CGCTGAGTGTTGGCCGAC 61.415 66.667 17.01 17.01 0.00 4.79
3593 3642 2.031163 GCTGAGTGTTGGCCGACT 59.969 61.111 23.87 12.95 0.00 4.18
3594 3643 1.292223 GCTGAGTGTTGGCCGACTA 59.708 57.895 23.87 7.86 0.00 2.59
3595 3644 0.320421 GCTGAGTGTTGGCCGACTAA 60.320 55.000 23.87 5.52 0.00 2.24
3596 3645 1.876416 GCTGAGTGTTGGCCGACTAAA 60.876 52.381 23.87 0.58 0.00 1.85
3597 3646 2.489971 CTGAGTGTTGGCCGACTAAAA 58.510 47.619 23.87 0.17 0.00 1.52
3598 3647 2.480419 CTGAGTGTTGGCCGACTAAAAG 59.520 50.000 23.87 12.34 0.00 2.27
3599 3648 1.804748 GAGTGTTGGCCGACTAAAAGG 59.195 52.381 23.87 0.00 0.00 3.11
3611 3660 4.742438 GACTAAAAGGCGACATGTTCAA 57.258 40.909 0.00 0.00 0.00 2.69
3612 3661 4.464112 GACTAAAAGGCGACATGTTCAAC 58.536 43.478 0.00 0.00 0.00 3.18
3613 3662 3.880490 ACTAAAAGGCGACATGTTCAACA 59.120 39.130 0.00 0.00 0.00 3.33
3614 3663 3.354089 AAAAGGCGACATGTTCAACAG 57.646 42.857 0.00 0.00 0.00 3.16
3615 3664 1.967319 AAGGCGACATGTTCAACAGT 58.033 45.000 0.00 0.00 0.00 3.55
3616 3665 1.967319 AGGCGACATGTTCAACAGTT 58.033 45.000 0.00 0.00 0.00 3.16
3617 3666 3.120321 AGGCGACATGTTCAACAGTTA 57.880 42.857 0.00 0.00 0.00 2.24
3618 3667 3.067106 AGGCGACATGTTCAACAGTTAG 58.933 45.455 0.00 0.00 0.00 2.34
3619 3668 2.159627 GGCGACATGTTCAACAGTTAGG 59.840 50.000 0.00 0.00 0.00 2.69
3620 3669 2.806244 GCGACATGTTCAACAGTTAGGT 59.194 45.455 0.00 0.00 0.00 3.08
3621 3670 3.363970 GCGACATGTTCAACAGTTAGGTG 60.364 47.826 0.00 0.00 35.78 4.00
3622 3671 3.807622 CGACATGTTCAACAGTTAGGTGT 59.192 43.478 0.00 0.00 35.97 4.16
3623 3672 4.318760 CGACATGTTCAACAGTTAGGTGTG 60.319 45.833 0.00 0.00 35.97 3.82
3624 3673 3.882888 ACATGTTCAACAGTTAGGTGTGG 59.117 43.478 0.00 0.00 35.97 4.17
3625 3674 2.294074 TGTTCAACAGTTAGGTGTGGC 58.706 47.619 0.00 0.00 35.97 5.01
3626 3675 1.263217 GTTCAACAGTTAGGTGTGGCG 59.737 52.381 0.00 0.00 35.97 5.69
3627 3676 0.250124 TCAACAGTTAGGTGTGGCGG 60.250 55.000 0.00 0.00 35.97 6.13
3628 3677 0.250124 CAACAGTTAGGTGTGGCGGA 60.250 55.000 0.00 0.00 0.00 5.54
3629 3678 0.034896 AACAGTTAGGTGTGGCGGAG 59.965 55.000 0.00 0.00 0.00 4.63
3630 3679 0.830444 ACAGTTAGGTGTGGCGGAGA 60.830 55.000 0.00 0.00 0.00 3.71
3631 3680 0.537188 CAGTTAGGTGTGGCGGAGAT 59.463 55.000 0.00 0.00 0.00 2.75
3632 3681 0.537188 AGTTAGGTGTGGCGGAGATG 59.463 55.000 0.00 0.00 0.00 2.90
3633 3682 1.090052 GTTAGGTGTGGCGGAGATGC 61.090 60.000 0.00 0.00 0.00 3.91
3634 3683 2.572095 TTAGGTGTGGCGGAGATGCG 62.572 60.000 0.00 0.00 35.06 4.73
3635 3684 4.760047 GGTGTGGCGGAGATGCGT 62.760 66.667 0.00 0.00 35.06 5.24
3636 3685 2.183300 GTGTGGCGGAGATGCGTA 59.817 61.111 0.00 0.00 35.06 4.42
3637 3686 1.227263 GTGTGGCGGAGATGCGTAT 60.227 57.895 0.00 0.00 35.06 3.06
3638 3687 1.227234 TGTGGCGGAGATGCGTATG 60.227 57.895 0.00 0.00 35.06 2.39
3639 3688 1.227263 GTGGCGGAGATGCGTATGT 60.227 57.895 0.00 0.00 35.06 2.29
3640 3689 0.810031 GTGGCGGAGATGCGTATGTT 60.810 55.000 0.00 0.00 35.06 2.71
3641 3690 0.809636 TGGCGGAGATGCGTATGTTG 60.810 55.000 0.00 0.00 35.06 3.33
3642 3691 0.529773 GGCGGAGATGCGTATGTTGA 60.530 55.000 0.00 0.00 35.06 3.18
3643 3692 0.855349 GCGGAGATGCGTATGTTGAG 59.145 55.000 0.00 0.00 0.00 3.02
3644 3693 1.536072 GCGGAGATGCGTATGTTGAGA 60.536 52.381 0.00 0.00 0.00 3.27
3645 3694 2.864097 GCGGAGATGCGTATGTTGAGAT 60.864 50.000 0.00 0.00 0.00 2.75
3646 3695 2.728318 CGGAGATGCGTATGTTGAGATG 59.272 50.000 0.00 0.00 0.00 2.90
3647 3696 3.062763 GGAGATGCGTATGTTGAGATGG 58.937 50.000 0.00 0.00 0.00 3.51
3648 3697 3.243873 GGAGATGCGTATGTTGAGATGGA 60.244 47.826 0.00 0.00 0.00 3.41
3649 3698 4.562347 GGAGATGCGTATGTTGAGATGGAT 60.562 45.833 0.00 0.00 0.00 3.41
3650 3699 4.313282 AGATGCGTATGTTGAGATGGATG 58.687 43.478 0.00 0.00 0.00 3.51
3651 3700 3.541996 TGCGTATGTTGAGATGGATGT 57.458 42.857 0.00 0.00 0.00 3.06
3652 3701 3.197265 TGCGTATGTTGAGATGGATGTG 58.803 45.455 0.00 0.00 0.00 3.21
3653 3702 3.198068 GCGTATGTTGAGATGGATGTGT 58.802 45.455 0.00 0.00 0.00 3.72
3654 3703 3.001634 GCGTATGTTGAGATGGATGTGTG 59.998 47.826 0.00 0.00 0.00 3.82
3655 3704 3.557185 CGTATGTTGAGATGGATGTGTGG 59.443 47.826 0.00 0.00 0.00 4.17
3656 3705 1.825090 TGTTGAGATGGATGTGTGGC 58.175 50.000 0.00 0.00 0.00 5.01
3657 3706 1.098050 GTTGAGATGGATGTGTGGCC 58.902 55.000 0.00 0.00 0.00 5.36
3658 3707 0.697658 TTGAGATGGATGTGTGGCCA 59.302 50.000 0.00 0.00 38.78 5.36
3659 3708 0.035152 TGAGATGGATGTGTGGCCAC 60.035 55.000 29.67 29.67 42.19 5.01
3669 3718 2.358737 GTGGCCACACGAGGAAGG 60.359 66.667 31.23 0.00 37.94 3.46
3670 3719 2.525629 TGGCCACACGAGGAAGGA 60.526 61.111 0.00 0.00 0.00 3.36
3671 3720 1.918293 TGGCCACACGAGGAAGGAT 60.918 57.895 0.00 0.00 0.00 3.24
3672 3721 1.153349 GGCCACACGAGGAAGGATC 60.153 63.158 0.00 0.00 0.00 3.36
3673 3722 1.519455 GCCACACGAGGAAGGATCG 60.519 63.158 0.00 0.00 45.54 3.69
3674 3723 1.945354 GCCACACGAGGAAGGATCGA 61.945 60.000 1.94 0.00 42.76 3.59
3675 3724 0.101399 CCACACGAGGAAGGATCGAG 59.899 60.000 1.94 0.00 42.76 4.04
3676 3725 0.811915 CACACGAGGAAGGATCGAGT 59.188 55.000 1.94 0.00 43.22 4.18
3677 3726 1.096416 ACACGAGGAAGGATCGAGTC 58.904 55.000 1.94 0.00 39.27 3.36
3687 3736 2.071688 GGATCGAGTCCGGAATGATG 57.928 55.000 10.26 0.00 37.23 3.07
3688 3737 1.613925 GGATCGAGTCCGGAATGATGA 59.386 52.381 10.26 4.67 37.23 2.92
3689 3738 2.232452 GGATCGAGTCCGGAATGATGAT 59.768 50.000 10.26 9.95 37.23 2.45
3690 3739 3.444034 GGATCGAGTCCGGAATGATGATA 59.556 47.826 10.26 0.00 37.23 2.15
3691 3740 4.098654 GGATCGAGTCCGGAATGATGATAT 59.901 45.833 10.26 0.00 37.23 1.63
3692 3741 5.299531 GGATCGAGTCCGGAATGATGATATA 59.700 44.000 10.26 0.00 37.23 0.86
3693 3742 5.562506 TCGAGTCCGGAATGATGATATAC 57.437 43.478 10.26 0.00 36.24 1.47
3694 3743 4.094442 TCGAGTCCGGAATGATGATATACG 59.906 45.833 10.26 2.94 36.24 3.06
3695 3744 4.094442 CGAGTCCGGAATGATGATATACGA 59.906 45.833 10.26 0.00 0.00 3.43
3696 3745 5.568685 AGTCCGGAATGATGATATACGAG 57.431 43.478 5.23 0.00 0.00 4.18
3697 3746 5.254115 AGTCCGGAATGATGATATACGAGA 58.746 41.667 5.23 0.00 0.00 4.04
3698 3747 5.888724 AGTCCGGAATGATGATATACGAGAT 59.111 40.000 5.23 0.00 0.00 2.75
3699 3748 7.054751 AGTCCGGAATGATGATATACGAGATA 58.945 38.462 5.23 0.00 0.00 1.98
3700 3749 7.227711 AGTCCGGAATGATGATATACGAGATAG 59.772 40.741 5.23 0.00 0.00 2.08
3701 3750 7.226918 GTCCGGAATGATGATATACGAGATAGA 59.773 40.741 5.23 0.00 0.00 1.98
3702 3751 7.442666 TCCGGAATGATGATATACGAGATAGAG 59.557 40.741 0.00 0.00 0.00 2.43
3703 3752 7.227711 CCGGAATGATGATATACGAGATAGAGT 59.772 40.741 0.00 0.00 0.00 3.24
3704 3753 8.616942 CGGAATGATGATATACGAGATAGAGTT 58.383 37.037 0.00 0.00 0.00 3.01
3705 3754 9.729023 GGAATGATGATATACGAGATAGAGTTG 57.271 37.037 0.00 0.00 0.00 3.16
3706 3755 9.729023 GAATGATGATATACGAGATAGAGTTGG 57.271 37.037 0.00 0.00 0.00 3.77
3707 3756 7.631717 TGATGATATACGAGATAGAGTTGGG 57.368 40.000 0.00 0.00 0.00 4.12
3708 3757 6.603599 TGATGATATACGAGATAGAGTTGGGG 59.396 42.308 0.00 0.00 0.00 4.96
3709 3758 5.888901 TGATATACGAGATAGAGTTGGGGT 58.111 41.667 0.00 0.00 0.00 4.95
3710 3759 7.024345 TGATATACGAGATAGAGTTGGGGTA 57.976 40.000 0.00 0.00 0.00 3.69
3711 3760 7.110810 TGATATACGAGATAGAGTTGGGGTAG 58.889 42.308 0.00 0.00 0.00 3.18
3712 3761 2.308690 ACGAGATAGAGTTGGGGTAGC 58.691 52.381 0.00 0.00 0.00 3.58
3713 3762 2.307768 CGAGATAGAGTTGGGGTAGCA 58.692 52.381 0.00 0.00 0.00 3.49
3714 3763 2.034812 CGAGATAGAGTTGGGGTAGCAC 59.965 54.545 0.00 0.00 0.00 4.40
3715 3764 2.365941 GAGATAGAGTTGGGGTAGCACC 59.634 54.545 0.00 0.00 37.60 5.01
3716 3765 2.116238 GATAGAGTTGGGGTAGCACCA 58.884 52.381 7.49 0.00 41.02 4.17
3717 3766 2.032965 TAGAGTTGGGGTAGCACCAA 57.967 50.000 9.86 9.86 45.25 3.67
3722 3771 2.685106 TTGGGGTAGCACCAATTGAA 57.315 45.000 7.12 0.00 42.75 2.69
3723 3772 2.214376 TGGGGTAGCACCAATTGAAG 57.786 50.000 7.12 0.00 41.02 3.02
3724 3773 1.707989 TGGGGTAGCACCAATTGAAGA 59.292 47.619 7.12 0.00 41.02 2.87
3725 3774 2.290896 TGGGGTAGCACCAATTGAAGAG 60.291 50.000 7.12 0.00 41.02 2.85
3726 3775 2.026262 GGGGTAGCACCAATTGAAGAGA 60.026 50.000 7.12 0.00 41.02 3.10
3727 3776 3.561313 GGGGTAGCACCAATTGAAGAGAA 60.561 47.826 7.12 0.00 41.02 2.87
3728 3777 3.691609 GGGTAGCACCAATTGAAGAGAAG 59.308 47.826 7.12 0.00 41.02 2.85
3729 3778 3.127721 GGTAGCACCAATTGAAGAGAAGC 59.872 47.826 7.12 0.92 38.42 3.86
3730 3779 3.151912 AGCACCAATTGAAGAGAAGCT 57.848 42.857 7.12 3.13 0.00 3.74
3731 3780 3.494332 AGCACCAATTGAAGAGAAGCTT 58.506 40.909 7.12 0.00 40.25 3.74
3732 3781 3.255149 AGCACCAATTGAAGAGAAGCTTG 59.745 43.478 2.10 0.00 36.83 4.01
3733 3782 3.005155 GCACCAATTGAAGAGAAGCTTGT 59.995 43.478 2.10 0.00 36.83 3.16
3734 3783 4.791974 CACCAATTGAAGAGAAGCTTGTC 58.208 43.478 15.54 15.54 36.83 3.18
3735 3784 3.823304 ACCAATTGAAGAGAAGCTTGTCC 59.177 43.478 19.26 6.46 36.83 4.02
3736 3785 3.822735 CCAATTGAAGAGAAGCTTGTCCA 59.177 43.478 19.26 8.99 36.83 4.02
3737 3786 4.279169 CCAATTGAAGAGAAGCTTGTCCAA 59.721 41.667 19.26 16.61 36.83 3.53
3738 3787 5.218139 CAATTGAAGAGAAGCTTGTCCAAC 58.782 41.667 19.26 11.55 36.83 3.77
3739 3788 3.558931 TGAAGAGAAGCTTGTCCAACA 57.441 42.857 19.26 13.75 36.83 3.33
3740 3789 4.090761 TGAAGAGAAGCTTGTCCAACAT 57.909 40.909 19.26 0.00 36.83 2.71
3741 3790 4.067896 TGAAGAGAAGCTTGTCCAACATC 58.932 43.478 19.26 10.83 36.83 3.06
3742 3791 2.693069 AGAGAAGCTTGTCCAACATCG 58.307 47.619 19.26 0.00 0.00 3.84
3743 3792 2.037772 AGAGAAGCTTGTCCAACATCGT 59.962 45.455 19.26 0.00 0.00 3.73
3744 3793 2.413453 GAGAAGCTTGTCCAACATCGTC 59.587 50.000 12.50 0.00 0.00 4.20
3745 3794 2.037772 AGAAGCTTGTCCAACATCGTCT 59.962 45.455 2.10 0.00 0.00 4.18
3746 3795 1.800805 AGCTTGTCCAACATCGTCTG 58.199 50.000 0.00 0.00 0.00 3.51
3747 3796 1.344438 AGCTTGTCCAACATCGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
3748 3797 1.728971 GCTTGTCCAACATCGTCTGAG 59.271 52.381 0.00 0.00 0.00 3.35
3749 3798 2.610479 GCTTGTCCAACATCGTCTGAGA 60.610 50.000 0.00 0.00 0.00 3.27
3750 3799 3.854666 CTTGTCCAACATCGTCTGAGAT 58.145 45.455 0.00 0.00 0.00 2.75
3754 3803 2.567169 TCCAACATCGTCTGAGATGGTT 59.433 45.455 16.20 0.00 45.46 3.67
3755 3804 3.007940 TCCAACATCGTCTGAGATGGTTT 59.992 43.478 16.20 0.00 45.46 3.27
3756 3805 3.125829 CCAACATCGTCTGAGATGGTTTG 59.874 47.826 16.20 12.97 45.46 2.93
3757 3806 3.125829 CAACATCGTCTGAGATGGTTTGG 59.874 47.826 16.20 0.00 45.46 3.28
3758 3807 2.283298 CATCGTCTGAGATGGTTTGGG 58.717 52.381 1.24 0.00 43.07 4.12
3759 3808 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.000 1.24 0.00 0.00 5.36
3760 3809 0.321564 CGTCTGAGATGGTTTGGGCA 60.322 55.000 0.00 0.00 0.00 5.36
3761 3810 1.679944 CGTCTGAGATGGTTTGGGCAT 60.680 52.381 0.00 0.00 0.00 4.40
3762 3811 2.419990 CGTCTGAGATGGTTTGGGCATA 60.420 50.000 0.00 0.00 0.00 3.14
3763 3812 3.745480 CGTCTGAGATGGTTTGGGCATAT 60.745 47.826 0.00 0.00 0.00 1.78
3764 3813 3.817647 GTCTGAGATGGTTTGGGCATATC 59.182 47.826 0.00 0.00 0.00 1.63
3765 3814 3.152341 CTGAGATGGTTTGGGCATATCC 58.848 50.000 0.00 0.00 0.00 2.59
3766 3815 2.513317 TGAGATGGTTTGGGCATATCCA 59.487 45.455 0.00 0.00 36.21 3.41
3767 3816 3.152341 GAGATGGTTTGGGCATATCCAG 58.848 50.000 0.00 0.00 38.17 3.86
3768 3817 1.615392 GATGGTTTGGGCATATCCAGC 59.385 52.381 0.00 0.00 38.17 4.85
3769 3818 0.751277 TGGTTTGGGCATATCCAGCG 60.751 55.000 0.00 0.00 38.17 5.18
3770 3819 1.360192 GTTTGGGCATATCCAGCGC 59.640 57.895 0.00 0.00 44.24 5.92
3773 3822 2.670934 GGGCATATCCAGCGCAGG 60.671 66.667 13.53 13.53 43.54 4.85
3774 3823 3.360340 GGCATATCCAGCGCAGGC 61.360 66.667 15.03 2.94 40.37 4.85
3775 3824 3.360340 GCATATCCAGCGCAGGCC 61.360 66.667 15.03 0.00 41.24 5.19
3776 3825 2.429058 CATATCCAGCGCAGGCCT 59.571 61.111 15.03 0.00 41.24 5.19
3777 3826 1.670406 CATATCCAGCGCAGGCCTC 60.670 63.158 15.03 0.00 41.24 4.70
3778 3827 2.888447 ATATCCAGCGCAGGCCTCC 61.888 63.158 15.03 0.00 41.24 4.30
3782 3831 4.399395 CAGCGCAGGCCTCCAGAA 62.399 66.667 11.47 0.00 41.24 3.02
3783 3832 4.093291 AGCGCAGGCCTCCAGAAG 62.093 66.667 11.47 0.00 41.24 2.85
3785 3834 4.093291 CGCAGGCCTCCAGAAGCT 62.093 66.667 0.00 0.00 0.00 3.74
3786 3835 2.124778 GCAGGCCTCCAGAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
3787 3836 2.588989 CAGGCCTCCAGAAGCTCC 59.411 66.667 0.00 0.00 0.00 4.70
3788 3837 2.123632 AGGCCTCCAGAAGCTCCA 59.876 61.111 0.00 0.00 0.00 3.86
3789 3838 1.994507 AGGCCTCCAGAAGCTCCAG 60.995 63.158 0.00 0.00 0.00 3.86
3790 3839 2.297129 GGCCTCCAGAAGCTCCAGT 61.297 63.158 0.00 0.00 0.00 4.00
3791 3840 1.078567 GCCTCCAGAAGCTCCAGTG 60.079 63.158 0.00 0.00 0.00 3.66
3792 3841 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
3793 3842 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
3794 3843 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
3795 3844 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
3796 3845 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
3797 3846 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
3798 3847 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
3799 3848 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
3800 3849 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
3801 3850 1.070445 GCTCCAGTGCATAGCGGAT 59.930 57.895 0.00 0.00 0.00 4.18
3802 3851 1.226686 GCTCCAGTGCATAGCGGATG 61.227 60.000 0.00 0.00 38.73 3.51
3803 3852 0.602106 CTCCAGTGCATAGCGGATGG 60.602 60.000 0.00 0.00 35.91 3.51
3804 3853 2.256591 CCAGTGCATAGCGGATGGC 61.257 63.158 0.00 0.00 44.05 4.40
3813 3862 2.709475 GCGGATGGCTAAAGCGTG 59.291 61.111 0.00 0.00 43.26 5.34
3814 3863 2.709475 CGGATGGCTAAAGCGTGC 59.291 61.111 0.00 0.00 43.26 5.34
3815 3864 1.815421 CGGATGGCTAAAGCGTGCT 60.815 57.895 0.00 0.00 43.26 4.40
3816 3865 1.723870 GGATGGCTAAAGCGTGCTG 59.276 57.895 0.00 0.00 43.26 4.41
3817 3866 0.744414 GGATGGCTAAAGCGTGCTGA 60.744 55.000 0.00 0.00 43.26 4.26
3818 3867 0.654683 GATGGCTAAAGCGTGCTGAG 59.345 55.000 0.00 0.00 43.26 3.35
3819 3868 0.250234 ATGGCTAAAGCGTGCTGAGA 59.750 50.000 7.92 0.00 43.26 3.27
3820 3869 0.034756 TGGCTAAAGCGTGCTGAGAA 59.965 50.000 7.92 0.00 43.26 2.87
3821 3870 1.339055 TGGCTAAAGCGTGCTGAGAAT 60.339 47.619 7.92 0.00 43.26 2.40
3822 3871 1.063174 GGCTAAAGCGTGCTGAGAATG 59.937 52.381 7.92 0.00 43.26 2.67
3823 3872 1.734465 GCTAAAGCGTGCTGAGAATGT 59.266 47.619 7.92 0.00 0.00 2.71
3824 3873 2.222908 GCTAAAGCGTGCTGAGAATGTC 60.223 50.000 7.92 0.00 0.00 3.06
3825 3874 1.882912 AAAGCGTGCTGAGAATGTCA 58.117 45.000 0.00 0.00 0.00 3.58
3826 3875 1.882912 AAGCGTGCTGAGAATGTCAA 58.117 45.000 0.00 0.00 33.60 3.18
3827 3876 1.436600 AGCGTGCTGAGAATGTCAAG 58.563 50.000 0.00 0.00 33.60 3.02
3828 3877 1.001293 AGCGTGCTGAGAATGTCAAGA 59.999 47.619 0.00 0.00 33.60 3.02
3829 3878 1.392853 GCGTGCTGAGAATGTCAAGAG 59.607 52.381 0.00 0.00 33.60 2.85
3830 3879 2.928301 GCGTGCTGAGAATGTCAAGAGA 60.928 50.000 0.00 0.00 33.60 3.10
3831 3880 2.922387 CGTGCTGAGAATGTCAAGAGAG 59.078 50.000 0.00 0.00 33.60 3.20
3832 3881 3.260740 GTGCTGAGAATGTCAAGAGAGG 58.739 50.000 0.00 0.00 33.60 3.69
3833 3882 2.235650 TGCTGAGAATGTCAAGAGAGGG 59.764 50.000 0.00 0.00 33.60 4.30
3834 3883 2.903798 CTGAGAATGTCAAGAGAGGGC 58.096 52.381 0.00 0.00 33.60 5.19
3835 3884 2.235650 CTGAGAATGTCAAGAGAGGGCA 59.764 50.000 0.00 0.00 33.60 5.36
3836 3885 2.235650 TGAGAATGTCAAGAGAGGGCAG 59.764 50.000 0.00 0.00 29.64 4.85
3837 3886 1.558756 AGAATGTCAAGAGAGGGCAGG 59.441 52.381 0.00 0.00 0.00 4.85
3838 3887 0.622665 AATGTCAAGAGAGGGCAGGG 59.377 55.000 0.00 0.00 0.00 4.45
3839 3888 0.548682 ATGTCAAGAGAGGGCAGGGT 60.549 55.000 0.00 0.00 0.00 4.34
3840 3889 0.116342 TGTCAAGAGAGGGCAGGGTA 59.884 55.000 0.00 0.00 0.00 3.69
3841 3890 0.827368 GTCAAGAGAGGGCAGGGTAG 59.173 60.000 0.00 0.00 0.00 3.18
3842 3891 0.710588 TCAAGAGAGGGCAGGGTAGA 59.289 55.000 0.00 0.00 0.00 2.59
3843 3892 0.827368 CAAGAGAGGGCAGGGTAGAC 59.173 60.000 0.00 0.00 0.00 2.59
3844 3893 0.325765 AAGAGAGGGCAGGGTAGACC 60.326 60.000 0.00 0.00 36.73 3.85
3845 3894 2.042843 AGAGGGCAGGGTAGACCG 60.043 66.667 0.00 0.00 43.43 4.79
3846 3895 2.043248 GAGGGCAGGGTAGACCGA 60.043 66.667 0.00 0.00 43.43 4.69
3847 3896 1.684734 GAGGGCAGGGTAGACCGAA 60.685 63.158 0.00 0.00 43.43 4.30
3848 3897 1.003051 AGGGCAGGGTAGACCGAAT 59.997 57.895 0.00 0.00 43.43 3.34
3849 3898 0.620700 AGGGCAGGGTAGACCGAATT 60.621 55.000 0.00 0.00 43.43 2.17
3850 3899 0.255033 GGGCAGGGTAGACCGAATTT 59.745 55.000 0.00 0.00 46.96 1.82
3851 3900 1.379527 GGCAGGGTAGACCGAATTTG 58.620 55.000 0.00 0.00 46.96 2.32
3852 3901 1.065709 GGCAGGGTAGACCGAATTTGA 60.066 52.381 0.00 0.00 46.96 2.69
3853 3902 2.007608 GCAGGGTAGACCGAATTTGAC 58.992 52.381 0.00 0.00 46.96 3.18
3854 3903 2.614481 GCAGGGTAGACCGAATTTGACA 60.614 50.000 0.00 0.00 46.96 3.58
3855 3904 3.873910 CAGGGTAGACCGAATTTGACAT 58.126 45.455 0.00 0.00 46.96 3.06
3856 3905 3.623060 CAGGGTAGACCGAATTTGACATG 59.377 47.826 0.00 0.00 46.96 3.21
3857 3906 2.943033 GGGTAGACCGAATTTGACATGG 59.057 50.000 0.00 0.00 36.71 3.66
3858 3907 2.943033 GGTAGACCGAATTTGACATGGG 59.057 50.000 0.00 0.00 0.00 4.00
3859 3908 3.370103 GGTAGACCGAATTTGACATGGGA 60.370 47.826 0.00 0.00 0.00 4.37
3860 3909 2.991250 AGACCGAATTTGACATGGGAG 58.009 47.619 0.00 0.00 0.00 4.30
3861 3910 2.017049 GACCGAATTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
3862 3911 1.633432 ACCGAATTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
3863 3912 2.292267 CCGAATTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
3864 3913 2.356125 CCGAATTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
3865 3914 2.939103 CGAATTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
3866 3915 3.282885 GAATTTGACATGGGAGGAGTCC 58.717 50.000 0.00 0.00 43.05 3.85
3867 3916 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
3868 3917 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
3869 3918 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
3870 3919 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
3871 3920 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
3872 3921 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
3873 3922 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
3874 3923 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
3875 3924 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
3876 3925 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
3877 3926 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
3878 3927 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
3879 3928 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
3880 3929 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
3881 3930 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
3882 3931 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
3883 3932 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
3884 3933 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
3885 3934 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
3886 3935 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
3887 3936 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
3888 3937 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
3889 3938 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
3890 3939 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
3891 3940 2.476199 AGAGAGACCTGAAGGATTGGG 58.524 52.381 2.62 0.00 38.94 4.12
3892 3941 1.488393 GAGAGACCTGAAGGATTGGGG 59.512 57.143 2.62 0.00 38.94 4.96
3893 3942 1.203492 AGAGACCTGAAGGATTGGGGT 60.203 52.381 2.62 0.00 38.94 4.95
3894 3943 2.045885 AGAGACCTGAAGGATTGGGGTA 59.954 50.000 2.62 0.00 38.94 3.69
3895 3944 3.049344 GAGACCTGAAGGATTGGGGTAT 58.951 50.000 2.62 0.00 38.94 2.73
3896 3945 3.049344 AGACCTGAAGGATTGGGGTATC 58.951 50.000 2.62 0.00 38.94 2.24
3897 3946 2.777692 GACCTGAAGGATTGGGGTATCA 59.222 50.000 2.62 0.00 38.94 2.15
3898 3947 2.509964 ACCTGAAGGATTGGGGTATCAC 59.490 50.000 2.62 0.00 38.94 3.06
3899 3948 2.158608 CCTGAAGGATTGGGGTATCACC 60.159 54.545 0.00 0.00 37.39 4.02
3900 3949 1.488812 TGAAGGATTGGGGTATCACCG 59.511 52.381 0.00 0.00 39.83 4.94
3901 3950 1.766496 GAAGGATTGGGGTATCACCGA 59.234 52.381 0.00 0.00 39.83 4.69
3902 3951 1.887797 AGGATTGGGGTATCACCGAA 58.112 50.000 0.00 0.00 39.83 4.30
3903 3952 1.768870 AGGATTGGGGTATCACCGAAG 59.231 52.381 0.00 0.00 39.83 3.79
3904 3953 1.766496 GGATTGGGGTATCACCGAAGA 59.234 52.381 0.00 0.00 39.83 2.87
3905 3954 2.224305 GGATTGGGGTATCACCGAAGAG 60.224 54.545 0.00 0.00 39.83 2.85
3906 3955 0.539986 TTGGGGTATCACCGAAGAGC 59.460 55.000 0.00 0.00 39.83 4.09
3907 3956 0.325296 TGGGGTATCACCGAAGAGCT 60.325 55.000 0.00 0.00 39.83 4.09
3908 3957 1.063492 TGGGGTATCACCGAAGAGCTA 60.063 52.381 0.00 0.00 39.83 3.32
3909 3958 1.614413 GGGGTATCACCGAAGAGCTAG 59.386 57.143 0.00 0.00 39.83 3.42
3910 3959 1.000052 GGGTATCACCGAAGAGCTAGC 60.000 57.143 6.62 6.62 39.83 3.42
3911 3960 1.957877 GGTATCACCGAAGAGCTAGCT 59.042 52.381 19.45 19.45 0.00 3.32
3912 3961 3.147629 GGTATCACCGAAGAGCTAGCTA 58.852 50.000 19.38 0.00 0.00 3.32
3913 3962 3.759618 GGTATCACCGAAGAGCTAGCTAT 59.240 47.826 19.38 12.73 0.00 2.97
3914 3963 3.932545 ATCACCGAAGAGCTAGCTATG 57.067 47.619 19.38 5.35 0.00 2.23
3915 3964 1.957177 TCACCGAAGAGCTAGCTATGG 59.043 52.381 19.38 18.33 0.00 2.74
3916 3965 1.957177 CACCGAAGAGCTAGCTATGGA 59.043 52.381 19.38 0.00 0.00 3.41
3917 3966 1.957877 ACCGAAGAGCTAGCTATGGAC 59.042 52.381 19.38 4.54 0.00 4.02
3918 3967 1.957177 CCGAAGAGCTAGCTATGGACA 59.043 52.381 19.38 0.00 0.00 4.02
3919 3968 2.030363 CCGAAGAGCTAGCTATGGACAG 60.030 54.545 19.38 5.13 0.00 3.51
3920 3969 2.030363 CGAAGAGCTAGCTATGGACAGG 60.030 54.545 19.38 0.00 0.00 4.00
3921 3970 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
3922 3971 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
3923 3972 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
169 172 4.228210 AGAATCCTTCTGTCTGGCCATTTA 59.772 41.667 5.51 0.00 38.91 1.40
222 225 4.036734 GGACTGTTTTCTGACTTCATGCAA 59.963 41.667 0.00 0.00 0.00 4.08
476 479 9.502091 ACAGATATTTAACTTGTGTACATGTGT 57.498 29.630 9.11 0.00 34.92 3.72
529 536 3.733443 AAGAAAACAAGGACATGGCAC 57.267 42.857 0.00 0.00 0.00 5.01
539 546 2.958355 TGCCAGGGAGAAAGAAAACAAG 59.042 45.455 0.00 0.00 0.00 3.16
745 759 0.972983 TGAGGACAGGCTGCTAGGAC 60.973 60.000 15.89 2.37 0.00 3.85
1131 1145 1.153066 TGCAGGCAAGTCGTGGAAA 60.153 52.632 0.00 0.00 0.00 3.13
1290 1304 1.002430 CCATATAGCGAGTGCCCATGT 59.998 52.381 0.00 0.00 44.31 3.21
1353 1367 3.817084 CCTGCATTTTGACACTCTGAAGA 59.183 43.478 0.00 0.00 0.00 2.87
1670 1684 2.205022 TCACCTCTTCCTGCATTTGG 57.795 50.000 0.00 0.00 0.00 3.28
1827 1841 6.104146 TGTACTAGCATGGAGTTGTAACAA 57.896 37.500 0.00 0.00 0.00 2.83
1831 1845 8.537016 ACTAAAATGTACTAGCATGGAGTTGTA 58.463 33.333 0.00 0.00 0.00 2.41
2076 2090 4.517285 AGAGCACTTTTCTGTCTGTTTCA 58.483 39.130 0.00 0.00 0.00 2.69
2533 2550 5.132897 TCTGAATGGGGTTTTTGATTTCG 57.867 39.130 0.00 0.00 0.00 3.46
2650 2693 0.722676 AGGGTAGGAATCCCACCAGA 59.277 55.000 18.31 0.00 46.82 3.86
2777 2820 2.358737 CCACTCGGGTTCTGTGGC 60.359 66.667 0.00 0.00 43.61 5.01
2969 3016 6.027749 GTGGTAAGCAATTCAAACTATTCCG 58.972 40.000 0.00 0.00 0.00 4.30
3056 3105 2.285950 TGTTTTTCACGCTACAGTTCGC 60.286 45.455 0.00 0.00 0.00 4.70
3073 3122 3.196901 TCACCACTCTGTACACTGTGTTT 59.803 43.478 19.73 0.00 0.00 2.83
3345 3394 6.265876 ACACCTTTATTTGTTAATCACCGGTT 59.734 34.615 2.97 0.00 0.00 4.44
3465 3514 3.654020 GCGCCGCTTCATCCATCC 61.654 66.667 0.00 0.00 0.00 3.51
3466 3515 3.654020 GGCGCCGCTTCATCCATC 61.654 66.667 12.58 0.00 0.00 3.51
3467 3516 3.993614 TTGGCGCCGCTTCATCCAT 62.994 57.895 23.90 0.00 0.00 3.41
3468 3517 4.713735 TTGGCGCCGCTTCATCCA 62.714 61.111 23.90 0.00 0.00 3.41
3469 3518 3.880846 CTTGGCGCCGCTTCATCC 61.881 66.667 23.90 0.00 0.00 3.51
3470 3519 4.543084 GCTTGGCGCCGCTTCATC 62.543 66.667 23.90 2.27 0.00 2.92
3482 3531 1.743958 CAGAGAATGCCAGAAGCTTGG 59.256 52.381 2.10 0.60 44.23 3.61
3483 3532 2.161808 CACAGAGAATGCCAGAAGCTTG 59.838 50.000 2.10 0.00 44.23 4.01
3484 3533 2.039480 TCACAGAGAATGCCAGAAGCTT 59.961 45.455 0.00 0.00 44.23 3.74
3485 3534 1.627329 TCACAGAGAATGCCAGAAGCT 59.373 47.619 0.00 0.00 44.23 3.74
3486 3535 1.736681 GTCACAGAGAATGCCAGAAGC 59.263 52.381 0.00 0.00 44.14 3.86
3487 3536 3.049708 TGTCACAGAGAATGCCAGAAG 57.950 47.619 0.00 0.00 0.00 2.85
3488 3537 3.071457 TCTTGTCACAGAGAATGCCAGAA 59.929 43.478 0.00 0.00 0.00 3.02
3489 3538 2.634453 TCTTGTCACAGAGAATGCCAGA 59.366 45.455 0.00 0.00 0.00 3.86
3490 3539 3.001414 CTCTTGTCACAGAGAATGCCAG 58.999 50.000 6.30 0.00 42.81 4.85
3491 3540 2.634453 TCTCTTGTCACAGAGAATGCCA 59.366 45.455 10.49 0.00 45.28 4.92
3492 3541 3.325293 TCTCTTGTCACAGAGAATGCC 57.675 47.619 10.49 0.00 45.28 4.40
3497 3546 1.615883 GGCACTCTCTTGTCACAGAGA 59.384 52.381 12.99 12.30 45.93 3.10
3498 3547 1.342496 TGGCACTCTCTTGTCACAGAG 59.658 52.381 6.48 6.48 41.69 3.35
3499 3548 1.413118 TGGCACTCTCTTGTCACAGA 58.587 50.000 0.00 0.00 0.00 3.41
3500 3549 3.995526 TGGCACTCTCTTGTCACAG 57.004 52.632 0.00 0.00 0.00 3.66
3503 3552 2.708216 TTTGTGGCACTCTCTTGTCA 57.292 45.000 19.83 0.00 0.00 3.58
3504 3553 2.287248 GCTTTTGTGGCACTCTCTTGTC 60.287 50.000 19.83 0.00 0.00 3.18
3505 3554 1.678101 GCTTTTGTGGCACTCTCTTGT 59.322 47.619 19.83 0.00 0.00 3.16
3506 3555 1.952296 AGCTTTTGTGGCACTCTCTTG 59.048 47.619 19.83 5.50 0.00 3.02
3507 3556 2.355010 AGCTTTTGTGGCACTCTCTT 57.645 45.000 19.83 0.00 0.00 2.85
3508 3557 3.492102 TTAGCTTTTGTGGCACTCTCT 57.508 42.857 19.83 10.69 0.00 3.10
3509 3558 4.540824 CTTTTAGCTTTTGTGGCACTCTC 58.459 43.478 19.83 3.73 0.00 3.20
3510 3559 3.319122 CCTTTTAGCTTTTGTGGCACTCT 59.681 43.478 19.83 10.04 0.00 3.24
3511 3560 3.642705 CCTTTTAGCTTTTGTGGCACTC 58.357 45.455 19.83 3.03 0.00 3.51
3512 3561 2.224042 GCCTTTTAGCTTTTGTGGCACT 60.224 45.455 19.83 0.00 38.79 4.40
3513 3562 2.135139 GCCTTTTAGCTTTTGTGGCAC 58.865 47.619 11.55 11.55 38.79 5.01
3514 3563 1.759445 TGCCTTTTAGCTTTTGTGGCA 59.241 42.857 13.54 13.54 45.31 4.92
3515 3564 2.524569 TGCCTTTTAGCTTTTGTGGC 57.475 45.000 0.00 0.49 39.33 5.01
3516 3565 4.058721 ACTTGCCTTTTAGCTTTTGTGG 57.941 40.909 0.00 0.00 0.00 4.17
3517 3566 5.351458 AGAACTTGCCTTTTAGCTTTTGTG 58.649 37.500 0.00 0.00 0.00 3.33
3518 3567 5.598416 AGAACTTGCCTTTTAGCTTTTGT 57.402 34.783 0.00 0.00 0.00 2.83
3519 3568 6.503524 TGTAGAACTTGCCTTTTAGCTTTTG 58.496 36.000 0.00 0.00 0.00 2.44
3520 3569 6.239036 CCTGTAGAACTTGCCTTTTAGCTTTT 60.239 38.462 0.00 0.00 0.00 2.27
3521 3570 5.241728 CCTGTAGAACTTGCCTTTTAGCTTT 59.758 40.000 0.00 0.00 0.00 3.51
3522 3571 4.762251 CCTGTAGAACTTGCCTTTTAGCTT 59.238 41.667 0.00 0.00 0.00 3.74
3523 3572 4.041691 TCCTGTAGAACTTGCCTTTTAGCT 59.958 41.667 0.00 0.00 0.00 3.32
3524 3573 4.154375 GTCCTGTAGAACTTGCCTTTTAGC 59.846 45.833 0.00 0.00 0.00 3.09
3525 3574 4.389077 CGTCCTGTAGAACTTGCCTTTTAG 59.611 45.833 0.00 0.00 0.00 1.85
3526 3575 4.312443 CGTCCTGTAGAACTTGCCTTTTA 58.688 43.478 0.00 0.00 0.00 1.52
3527 3576 3.139077 CGTCCTGTAGAACTTGCCTTTT 58.861 45.455 0.00 0.00 0.00 2.27
3528 3577 2.550208 CCGTCCTGTAGAACTTGCCTTT 60.550 50.000 0.00 0.00 0.00 3.11
3529 3578 1.002087 CCGTCCTGTAGAACTTGCCTT 59.998 52.381 0.00 0.00 0.00 4.35
3530 3579 0.608640 CCGTCCTGTAGAACTTGCCT 59.391 55.000 0.00 0.00 0.00 4.75
3531 3580 1.019805 GCCGTCCTGTAGAACTTGCC 61.020 60.000 0.00 0.00 0.00 4.52
3532 3581 1.352156 CGCCGTCCTGTAGAACTTGC 61.352 60.000 0.00 0.00 0.00 4.01
3533 3582 0.736325 CCGCCGTCCTGTAGAACTTG 60.736 60.000 0.00 0.00 0.00 3.16
3534 3583 1.183676 ACCGCCGTCCTGTAGAACTT 61.184 55.000 0.00 0.00 0.00 2.66
3535 3584 1.183676 AACCGCCGTCCTGTAGAACT 61.184 55.000 0.00 0.00 0.00 3.01
3536 3585 0.735287 GAACCGCCGTCCTGTAGAAC 60.735 60.000 0.00 0.00 0.00 3.01
3537 3586 1.588082 GAACCGCCGTCCTGTAGAA 59.412 57.895 0.00 0.00 0.00 2.10
3538 3587 2.693762 CGAACCGCCGTCCTGTAGA 61.694 63.158 0.00 0.00 0.00 2.59
3539 3588 2.202570 CGAACCGCCGTCCTGTAG 60.203 66.667 0.00 0.00 0.00 2.74
3540 3589 2.672651 TCGAACCGCCGTCCTGTA 60.673 61.111 0.00 0.00 0.00 2.74
3541 3590 4.353437 GTCGAACCGCCGTCCTGT 62.353 66.667 0.00 0.00 0.00 4.00
3551 3600 1.209127 CAACATTGCGGGTCGAACC 59.791 57.895 10.31 10.31 37.60 3.62
3552 3601 1.149987 TACAACATTGCGGGTCGAAC 58.850 50.000 0.00 0.00 0.00 3.95
3553 3602 1.735018 CATACAACATTGCGGGTCGAA 59.265 47.619 0.00 0.00 0.00 3.71
3554 3603 1.364721 CATACAACATTGCGGGTCGA 58.635 50.000 0.00 0.00 0.00 4.20
3555 3604 0.376852 CCATACAACATTGCGGGTCG 59.623 55.000 0.00 0.00 0.00 4.79
3556 3605 0.100503 GCCATACAACATTGCGGGTC 59.899 55.000 0.00 0.00 0.00 4.46
3557 3606 1.653094 CGCCATACAACATTGCGGGT 61.653 55.000 0.00 0.00 41.42 5.28
3558 3607 1.063972 CGCCATACAACATTGCGGG 59.936 57.895 0.00 0.00 41.42 6.13
3559 3608 1.586042 GCGCCATACAACATTGCGG 60.586 57.895 0.00 0.00 44.96 5.69
3561 3610 0.451383 TCAGCGCCATACAACATTGC 59.549 50.000 2.29 0.00 0.00 3.56
3562 3611 1.739466 ACTCAGCGCCATACAACATTG 59.261 47.619 2.29 0.00 0.00 2.82
3563 3612 1.739466 CACTCAGCGCCATACAACATT 59.261 47.619 2.29 0.00 0.00 2.71
3564 3613 1.339055 ACACTCAGCGCCATACAACAT 60.339 47.619 2.29 0.00 0.00 2.71
3565 3614 0.034756 ACACTCAGCGCCATACAACA 59.965 50.000 2.29 0.00 0.00 3.33
3566 3615 1.135972 CAACACTCAGCGCCATACAAC 60.136 52.381 2.29 0.00 0.00 3.32
3567 3616 1.155889 CAACACTCAGCGCCATACAA 58.844 50.000 2.29 0.00 0.00 2.41
3568 3617 0.673333 CCAACACTCAGCGCCATACA 60.673 55.000 2.29 0.00 0.00 2.29
3569 3618 1.982073 GCCAACACTCAGCGCCATAC 61.982 60.000 2.29 0.00 0.00 2.39
3570 3619 1.745115 GCCAACACTCAGCGCCATA 60.745 57.895 2.29 0.00 0.00 2.74
3571 3620 3.058160 GCCAACACTCAGCGCCAT 61.058 61.111 2.29 0.00 0.00 4.40
3575 3624 2.486636 TAGTCGGCCAACACTCAGCG 62.487 60.000 2.24 0.00 0.00 5.18
3576 3625 0.320421 TTAGTCGGCCAACACTCAGC 60.320 55.000 2.24 0.00 0.00 4.26
3577 3626 2.163818 TTTAGTCGGCCAACACTCAG 57.836 50.000 2.24 0.00 0.00 3.35
3578 3627 2.489971 CTTTTAGTCGGCCAACACTCA 58.510 47.619 2.24 0.00 0.00 3.41
3579 3628 1.804748 CCTTTTAGTCGGCCAACACTC 59.195 52.381 2.24 0.00 0.00 3.51
3580 3629 1.892209 CCTTTTAGTCGGCCAACACT 58.108 50.000 2.24 3.64 0.00 3.55
3581 3630 0.240145 GCCTTTTAGTCGGCCAACAC 59.760 55.000 2.24 0.00 40.43 3.32
3582 3631 1.231958 CGCCTTTTAGTCGGCCAACA 61.232 55.000 2.24 0.00 43.38 3.33
3583 3632 0.952010 TCGCCTTTTAGTCGGCCAAC 60.952 55.000 2.24 0.00 43.38 3.77
3584 3633 0.952010 GTCGCCTTTTAGTCGGCCAA 60.952 55.000 2.24 0.00 43.38 4.52
3585 3634 1.375013 GTCGCCTTTTAGTCGGCCA 60.375 57.895 2.24 0.00 43.38 5.36
3586 3635 0.743345 ATGTCGCCTTTTAGTCGGCC 60.743 55.000 0.00 0.00 43.38 6.13
3587 3636 0.373716 CATGTCGCCTTTTAGTCGGC 59.626 55.000 0.00 0.00 42.86 5.54
3588 3637 1.722011 ACATGTCGCCTTTTAGTCGG 58.278 50.000 0.00 0.00 0.00 4.79
3589 3638 2.734606 TGAACATGTCGCCTTTTAGTCG 59.265 45.455 0.00 0.00 0.00 4.18
3590 3639 4.024387 TGTTGAACATGTCGCCTTTTAGTC 60.024 41.667 0.00 0.00 0.00 2.59
3591 3640 3.880490 TGTTGAACATGTCGCCTTTTAGT 59.120 39.130 0.00 0.00 0.00 2.24
3592 3641 4.024048 ACTGTTGAACATGTCGCCTTTTAG 60.024 41.667 0.00 0.00 0.00 1.85
3593 3642 3.880490 ACTGTTGAACATGTCGCCTTTTA 59.120 39.130 0.00 0.00 0.00 1.52
3594 3643 2.687935 ACTGTTGAACATGTCGCCTTTT 59.312 40.909 0.00 0.00 0.00 2.27
3595 3644 2.297701 ACTGTTGAACATGTCGCCTTT 58.702 42.857 0.00 0.00 0.00 3.11
3596 3645 1.967319 ACTGTTGAACATGTCGCCTT 58.033 45.000 0.00 0.00 0.00 4.35
3597 3646 1.967319 AACTGTTGAACATGTCGCCT 58.033 45.000 0.00 0.00 0.00 5.52
3598 3647 2.159627 CCTAACTGTTGAACATGTCGCC 59.840 50.000 0.00 0.00 0.00 5.54
3599 3648 2.806244 ACCTAACTGTTGAACATGTCGC 59.194 45.455 0.00 0.00 0.00 5.19
3600 3649 3.807622 ACACCTAACTGTTGAACATGTCG 59.192 43.478 0.00 0.00 0.00 4.35
3601 3650 4.024048 CCACACCTAACTGTTGAACATGTC 60.024 45.833 0.00 0.00 0.00 3.06
3602 3651 3.882888 CCACACCTAACTGTTGAACATGT 59.117 43.478 0.00 0.00 0.00 3.21
3603 3652 3.304659 GCCACACCTAACTGTTGAACATG 60.305 47.826 0.00 0.00 0.00 3.21
3604 3653 2.884639 GCCACACCTAACTGTTGAACAT 59.115 45.455 0.00 0.00 0.00 2.71
3605 3654 2.294074 GCCACACCTAACTGTTGAACA 58.706 47.619 2.69 0.00 0.00 3.18
3606 3655 1.263217 CGCCACACCTAACTGTTGAAC 59.737 52.381 2.69 0.00 0.00 3.18
3607 3656 1.588674 CGCCACACCTAACTGTTGAA 58.411 50.000 2.69 0.00 0.00 2.69
3608 3657 0.250124 CCGCCACACCTAACTGTTGA 60.250 55.000 2.69 0.00 0.00 3.18
3609 3658 0.250124 TCCGCCACACCTAACTGTTG 60.250 55.000 2.69 0.00 0.00 3.33
3610 3659 0.034896 CTCCGCCACACCTAACTGTT 59.965 55.000 0.00 0.00 0.00 3.16
3611 3660 0.830444 TCTCCGCCACACCTAACTGT 60.830 55.000 0.00 0.00 0.00 3.55
3612 3661 0.537188 ATCTCCGCCACACCTAACTG 59.463 55.000 0.00 0.00 0.00 3.16
3613 3662 0.537188 CATCTCCGCCACACCTAACT 59.463 55.000 0.00 0.00 0.00 2.24
3614 3663 1.090052 GCATCTCCGCCACACCTAAC 61.090 60.000 0.00 0.00 0.00 2.34
3615 3664 1.220749 GCATCTCCGCCACACCTAA 59.779 57.895 0.00 0.00 0.00 2.69
3616 3665 2.900273 GCATCTCCGCCACACCTA 59.100 61.111 0.00 0.00 0.00 3.08
3617 3666 4.457496 CGCATCTCCGCCACACCT 62.457 66.667 0.00 0.00 0.00 4.00
3618 3667 2.644555 ATACGCATCTCCGCCACACC 62.645 60.000 0.00 0.00 0.00 4.16
3619 3668 1.227263 ATACGCATCTCCGCCACAC 60.227 57.895 0.00 0.00 0.00 3.82
3620 3669 1.227234 CATACGCATCTCCGCCACA 60.227 57.895 0.00 0.00 0.00 4.17
3621 3670 0.810031 AACATACGCATCTCCGCCAC 60.810 55.000 0.00 0.00 0.00 5.01
3622 3671 0.809636 CAACATACGCATCTCCGCCA 60.810 55.000 0.00 0.00 0.00 5.69
3623 3672 0.529773 TCAACATACGCATCTCCGCC 60.530 55.000 0.00 0.00 0.00 6.13
3624 3673 0.855349 CTCAACATACGCATCTCCGC 59.145 55.000 0.00 0.00 0.00 5.54
3625 3674 2.492019 TCTCAACATACGCATCTCCG 57.508 50.000 0.00 0.00 0.00 4.63
3626 3675 3.062763 CCATCTCAACATACGCATCTCC 58.937 50.000 0.00 0.00 0.00 3.71
3627 3676 3.982475 TCCATCTCAACATACGCATCTC 58.018 45.455 0.00 0.00 0.00 2.75
3628 3677 4.202295 ACATCCATCTCAACATACGCATCT 60.202 41.667 0.00 0.00 0.00 2.90
3629 3678 4.060900 ACATCCATCTCAACATACGCATC 58.939 43.478 0.00 0.00 0.00 3.91
3630 3679 3.811497 CACATCCATCTCAACATACGCAT 59.189 43.478 0.00 0.00 0.00 4.73
3631 3680 3.197265 CACATCCATCTCAACATACGCA 58.803 45.455 0.00 0.00 0.00 5.24
3632 3681 3.001634 CACACATCCATCTCAACATACGC 59.998 47.826 0.00 0.00 0.00 4.42
3633 3682 3.557185 CCACACATCCATCTCAACATACG 59.443 47.826 0.00 0.00 0.00 3.06
3634 3683 3.313526 GCCACACATCCATCTCAACATAC 59.686 47.826 0.00 0.00 0.00 2.39
3635 3684 3.544684 GCCACACATCCATCTCAACATA 58.455 45.455 0.00 0.00 0.00 2.29
3636 3685 2.372264 GCCACACATCCATCTCAACAT 58.628 47.619 0.00 0.00 0.00 2.71
3637 3686 1.614051 GGCCACACATCCATCTCAACA 60.614 52.381 0.00 0.00 0.00 3.33
3638 3687 1.098050 GGCCACACATCCATCTCAAC 58.902 55.000 0.00 0.00 0.00 3.18
3639 3688 0.697658 TGGCCACACATCCATCTCAA 59.302 50.000 0.00 0.00 0.00 3.02
3640 3689 0.035152 GTGGCCACACATCCATCTCA 60.035 55.000 31.23 0.00 46.90 3.27
3641 3690 2.785868 GTGGCCACACATCCATCTC 58.214 57.895 31.23 0.00 46.90 2.75
3651 3700 2.425592 CTTCCTCGTGTGGCCACA 59.574 61.111 34.74 34.74 41.93 4.17
3652 3701 2.185310 ATCCTTCCTCGTGTGGCCAC 62.185 60.000 29.67 29.67 38.27 5.01
3653 3702 1.899437 GATCCTTCCTCGTGTGGCCA 61.899 60.000 0.00 0.00 0.00 5.36
3654 3703 1.153349 GATCCTTCCTCGTGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
3655 3704 1.519455 CGATCCTTCCTCGTGTGGC 60.519 63.158 0.00 0.00 0.00 5.01
3656 3705 0.101399 CTCGATCCTTCCTCGTGTGG 59.899 60.000 0.00 0.00 37.40 4.17
3657 3706 0.811915 ACTCGATCCTTCCTCGTGTG 59.188 55.000 0.34 0.00 40.21 3.82
3658 3707 1.096416 GACTCGATCCTTCCTCGTGT 58.904 55.000 0.70 0.70 43.19 4.49
3659 3708 0.382515 GGACTCGATCCTTCCTCGTG 59.617 60.000 6.63 0.00 45.22 4.35
3660 3709 1.096386 CGGACTCGATCCTTCCTCGT 61.096 60.000 10.77 0.00 46.69 4.18
3661 3710 1.649815 CGGACTCGATCCTTCCTCG 59.350 63.158 10.77 0.00 46.69 4.63
3662 3711 0.465824 TCCGGACTCGATCCTTCCTC 60.466 60.000 0.00 0.00 46.69 3.71
3663 3712 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.000 1.83 0.00 46.69 3.36
3664 3713 1.041437 ATTCCGGACTCGATCCTTCC 58.959 55.000 1.83 3.28 46.69 3.46
3665 3714 1.681793 TCATTCCGGACTCGATCCTTC 59.318 52.381 1.83 0.00 46.69 3.46
3666 3715 1.776662 TCATTCCGGACTCGATCCTT 58.223 50.000 1.83 0.00 46.69 3.36
3667 3716 1.615883 CATCATTCCGGACTCGATCCT 59.384 52.381 1.83 0.00 46.69 3.24
3668 3717 1.613925 TCATCATTCCGGACTCGATCC 59.386 52.381 1.83 4.37 45.20 3.36
3669 3718 3.584406 ATCATCATTCCGGACTCGATC 57.416 47.619 1.83 0.00 39.00 3.69
3670 3719 5.220873 CGTATATCATCATTCCGGACTCGAT 60.221 44.000 1.83 3.28 39.00 3.59
3671 3720 4.094442 CGTATATCATCATTCCGGACTCGA 59.906 45.833 1.83 0.34 39.00 4.04
3672 3721 4.094442 TCGTATATCATCATTCCGGACTCG 59.906 45.833 1.83 0.00 0.00 4.18
3673 3722 5.354513 TCTCGTATATCATCATTCCGGACTC 59.645 44.000 1.83 0.00 0.00 3.36
3674 3723 5.254115 TCTCGTATATCATCATTCCGGACT 58.746 41.667 1.83 0.00 0.00 3.85
3675 3724 5.562506 TCTCGTATATCATCATTCCGGAC 57.437 43.478 1.83 0.00 0.00 4.79
3676 3725 7.280356 TCTATCTCGTATATCATCATTCCGGA 58.720 38.462 0.00 0.00 0.00 5.14
3677 3726 7.227711 ACTCTATCTCGTATATCATCATTCCGG 59.772 40.741 0.00 0.00 0.00 5.14
3678 3727 8.148807 ACTCTATCTCGTATATCATCATTCCG 57.851 38.462 0.00 0.00 0.00 4.30
3679 3728 9.729023 CAACTCTATCTCGTATATCATCATTCC 57.271 37.037 0.00 0.00 0.00 3.01
3680 3729 9.729023 CCAACTCTATCTCGTATATCATCATTC 57.271 37.037 0.00 0.00 0.00 2.67
3681 3730 8.690884 CCCAACTCTATCTCGTATATCATCATT 58.309 37.037 0.00 0.00 0.00 2.57
3682 3731 7.286546 CCCCAACTCTATCTCGTATATCATCAT 59.713 40.741 0.00 0.00 0.00 2.45
3683 3732 6.603599 CCCCAACTCTATCTCGTATATCATCA 59.396 42.308 0.00 0.00 0.00 3.07
3684 3733 6.603997 ACCCCAACTCTATCTCGTATATCATC 59.396 42.308 0.00 0.00 0.00 2.92
3685 3734 6.494952 ACCCCAACTCTATCTCGTATATCAT 58.505 40.000 0.00 0.00 0.00 2.45
3686 3735 5.888901 ACCCCAACTCTATCTCGTATATCA 58.111 41.667 0.00 0.00 0.00 2.15
3687 3736 6.038492 GCTACCCCAACTCTATCTCGTATATC 59.962 46.154 0.00 0.00 0.00 1.63
3688 3737 5.887035 GCTACCCCAACTCTATCTCGTATAT 59.113 44.000 0.00 0.00 0.00 0.86
3689 3738 5.221986 TGCTACCCCAACTCTATCTCGTATA 60.222 44.000 0.00 0.00 0.00 1.47
3690 3739 4.080687 GCTACCCCAACTCTATCTCGTAT 58.919 47.826 0.00 0.00 0.00 3.06
3691 3740 3.117776 TGCTACCCCAACTCTATCTCGTA 60.118 47.826 0.00 0.00 0.00 3.43
3692 3741 2.308690 GCTACCCCAACTCTATCTCGT 58.691 52.381 0.00 0.00 0.00 4.18
3693 3742 2.034812 GTGCTACCCCAACTCTATCTCG 59.965 54.545 0.00 0.00 0.00 4.04
3694 3743 2.365941 GGTGCTACCCCAACTCTATCTC 59.634 54.545 0.00 0.00 30.04 2.75
3695 3744 2.292918 TGGTGCTACCCCAACTCTATCT 60.293 50.000 3.33 0.00 37.50 1.98
3696 3745 2.116238 TGGTGCTACCCCAACTCTATC 58.884 52.381 3.33 0.00 37.50 2.08
3697 3746 2.263895 TGGTGCTACCCCAACTCTAT 57.736 50.000 3.33 0.00 37.50 1.98
3698 3747 2.032965 TTGGTGCTACCCCAACTCTA 57.967 50.000 3.33 0.00 37.50 2.43
3699 3748 1.372501 ATTGGTGCTACCCCAACTCT 58.627 50.000 0.00 0.00 44.36 3.24
3700 3749 1.818674 CAATTGGTGCTACCCCAACTC 59.181 52.381 0.00 0.00 44.36 3.01
3701 3750 1.427368 TCAATTGGTGCTACCCCAACT 59.573 47.619 5.42 0.00 44.36 3.16
3702 3751 1.917872 TCAATTGGTGCTACCCCAAC 58.082 50.000 5.42 0.00 44.36 3.77
3703 3752 2.109128 TCTTCAATTGGTGCTACCCCAA 59.891 45.455 5.42 0.00 45.55 4.12
3704 3753 1.707989 TCTTCAATTGGTGCTACCCCA 59.292 47.619 5.42 0.00 37.50 4.96
3705 3754 2.026262 TCTCTTCAATTGGTGCTACCCC 60.026 50.000 5.42 0.00 37.50 4.95
3706 3755 3.350219 TCTCTTCAATTGGTGCTACCC 57.650 47.619 5.42 0.00 37.50 3.69
3707 3756 3.127721 GCTTCTCTTCAATTGGTGCTACC 59.872 47.826 5.42 0.00 39.22 3.18
3708 3757 4.006319 AGCTTCTCTTCAATTGGTGCTAC 58.994 43.478 5.42 0.00 0.00 3.58
3709 3758 4.292186 AGCTTCTCTTCAATTGGTGCTA 57.708 40.909 5.42 0.00 0.00 3.49
3710 3759 3.151912 AGCTTCTCTTCAATTGGTGCT 57.848 42.857 5.42 2.81 0.00 4.40
3711 3760 3.005155 ACAAGCTTCTCTTCAATTGGTGC 59.995 43.478 5.42 0.62 31.27 5.01
3712 3761 4.320788 GGACAAGCTTCTCTTCAATTGGTG 60.321 45.833 5.42 0.00 31.27 4.17
3713 3762 3.823304 GGACAAGCTTCTCTTCAATTGGT 59.177 43.478 5.42 0.00 31.27 3.67
3714 3763 3.822735 TGGACAAGCTTCTCTTCAATTGG 59.177 43.478 5.42 0.00 31.27 3.16
3715 3764 5.218139 GTTGGACAAGCTTCTCTTCAATTG 58.782 41.667 0.00 0.00 31.27 2.32
3716 3765 4.889409 TGTTGGACAAGCTTCTCTTCAATT 59.111 37.500 0.00 0.00 31.27 2.32
3717 3766 4.464008 TGTTGGACAAGCTTCTCTTCAAT 58.536 39.130 0.00 0.00 31.27 2.57
3718 3767 3.884895 TGTTGGACAAGCTTCTCTTCAA 58.115 40.909 0.00 0.00 31.27 2.69
3719 3768 3.558931 TGTTGGACAAGCTTCTCTTCA 57.441 42.857 0.00 0.00 31.27 3.02
3720 3769 3.124297 CGATGTTGGACAAGCTTCTCTTC 59.876 47.826 0.00 0.00 31.27 2.87
3721 3770 3.070018 CGATGTTGGACAAGCTTCTCTT 58.930 45.455 0.00 0.00 34.78 2.85
3722 3771 2.037772 ACGATGTTGGACAAGCTTCTCT 59.962 45.455 0.00 0.00 0.00 3.10
3723 3772 2.413453 GACGATGTTGGACAAGCTTCTC 59.587 50.000 0.00 0.00 0.00 2.87
3724 3773 2.037772 AGACGATGTTGGACAAGCTTCT 59.962 45.455 0.00 0.00 0.00 2.85
3725 3774 2.158449 CAGACGATGTTGGACAAGCTTC 59.842 50.000 0.00 0.00 0.00 3.86
3726 3775 2.146342 CAGACGATGTTGGACAAGCTT 58.854 47.619 0.00 0.00 0.00 3.74
3727 3776 1.344438 TCAGACGATGTTGGACAAGCT 59.656 47.619 0.00 0.00 0.00 3.74
3728 3777 1.728971 CTCAGACGATGTTGGACAAGC 59.271 52.381 0.00 0.00 0.00 4.01
3729 3778 3.303881 TCTCAGACGATGTTGGACAAG 57.696 47.619 0.00 0.00 0.00 3.16
3730 3779 3.588955 CATCTCAGACGATGTTGGACAA 58.411 45.455 0.00 0.00 36.80 3.18
3731 3780 2.094026 CCATCTCAGACGATGTTGGACA 60.094 50.000 0.00 0.00 39.26 4.02
3732 3781 2.093973 ACCATCTCAGACGATGTTGGAC 60.094 50.000 0.00 0.00 39.26 4.02
3733 3782 2.179427 ACCATCTCAGACGATGTTGGA 58.821 47.619 0.00 0.00 39.26 3.53
3734 3783 2.680312 ACCATCTCAGACGATGTTGG 57.320 50.000 0.00 0.39 39.26 3.77
3735 3784 3.125829 CCAAACCATCTCAGACGATGTTG 59.874 47.826 0.00 7.25 39.26 3.33
3736 3785 3.338249 CCAAACCATCTCAGACGATGTT 58.662 45.455 0.00 0.00 39.26 2.71
3737 3786 2.355108 CCCAAACCATCTCAGACGATGT 60.355 50.000 0.00 0.00 39.26 3.06
3738 3787 2.283298 CCCAAACCATCTCAGACGATG 58.717 52.381 0.00 0.00 40.32 3.84
3739 3788 1.407437 GCCCAAACCATCTCAGACGAT 60.407 52.381 0.00 0.00 0.00 3.73
3740 3789 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.00 0.00 4.20
3741 3790 0.321564 TGCCCAAACCATCTCAGACG 60.322 55.000 0.00 0.00 0.00 4.18
3742 3791 2.134789 ATGCCCAAACCATCTCAGAC 57.865 50.000 0.00 0.00 0.00 3.51
3743 3792 3.181440 GGATATGCCCAAACCATCTCAGA 60.181 47.826 0.00 0.00 0.00 3.27
3744 3793 3.152341 GGATATGCCCAAACCATCTCAG 58.848 50.000 0.00 0.00 0.00 3.35
3745 3794 2.513317 TGGATATGCCCAAACCATCTCA 59.487 45.455 0.00 0.00 34.97 3.27
3746 3795 3.152341 CTGGATATGCCCAAACCATCTC 58.848 50.000 0.00 0.00 35.47 2.75
3747 3796 2.754186 GCTGGATATGCCCAAACCATCT 60.754 50.000 0.00 0.00 35.47 2.90
3748 3797 1.615392 GCTGGATATGCCCAAACCATC 59.385 52.381 0.00 0.00 35.47 3.51
3749 3798 1.708341 GCTGGATATGCCCAAACCAT 58.292 50.000 0.00 0.00 35.47 3.55
3750 3799 0.751277 CGCTGGATATGCCCAAACCA 60.751 55.000 0.00 0.00 35.47 3.67
3751 3800 2.032981 CGCTGGATATGCCCAAACC 58.967 57.895 0.00 0.00 35.47 3.27
3752 3801 1.360192 GCGCTGGATATGCCCAAAC 59.640 57.895 0.00 0.00 35.47 2.93
3753 3802 1.077140 TGCGCTGGATATGCCCAAA 60.077 52.632 9.73 0.00 35.47 3.28
3754 3803 1.526686 CTGCGCTGGATATGCCCAA 60.527 57.895 9.73 0.00 35.47 4.12
3755 3804 2.111669 CTGCGCTGGATATGCCCA 59.888 61.111 9.73 0.00 34.97 5.36
3756 3805 2.670934 CCTGCGCTGGATATGCCC 60.671 66.667 27.72 0.00 34.97 5.36
3757 3806 3.360340 GCCTGCGCTGGATATGCC 61.360 66.667 34.52 13.50 37.10 4.40
3758 3807 3.360340 GGCCTGCGCTGGATATGC 61.360 66.667 34.52 18.93 34.44 3.14
3759 3808 1.670406 GAGGCCTGCGCTGGATATG 60.670 63.158 34.52 10.13 34.44 1.78
3760 3809 2.746359 GAGGCCTGCGCTGGATAT 59.254 61.111 34.52 19.46 34.44 1.63
3761 3810 3.550431 GGAGGCCTGCGCTGGATA 61.550 66.667 34.52 0.00 34.44 2.59
3765 3814 4.399395 TTCTGGAGGCCTGCGCTG 62.399 66.667 20.39 12.20 34.44 5.18
3766 3815 4.093291 CTTCTGGAGGCCTGCGCT 62.093 66.667 20.39 0.00 34.44 5.92
3768 3817 4.093291 AGCTTCTGGAGGCCTGCG 62.093 66.667 20.39 14.23 33.44 5.18
3769 3818 2.124778 GAGCTTCTGGAGGCCTGC 60.125 66.667 18.95 18.95 33.44 4.85
3770 3819 2.254737 CTGGAGCTTCTGGAGGCCTG 62.255 65.000 12.00 0.00 33.44 4.85
3771 3820 1.994507 CTGGAGCTTCTGGAGGCCT 60.995 63.158 3.86 3.86 33.44 5.19
3772 3821 2.297129 ACTGGAGCTTCTGGAGGCC 61.297 63.158 3.68 0.00 33.44 5.19
3773 3822 1.078567 CACTGGAGCTTCTGGAGGC 60.079 63.158 3.68 0.00 0.00 4.70
3774 3823 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
3775 3824 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
3776 3825 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
3777 3826 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
3778 3827 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
3779 3828 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
3780 3829 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
3781 3830 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
3782 3831 1.406065 ATCCGCTATGCACTGGAGCT 61.406 55.000 9.31 0.00 33.21 4.09
3783 3832 1.070445 ATCCGCTATGCACTGGAGC 59.930 57.895 0.00 0.00 33.21 4.70
3784 3833 0.602106 CCATCCGCTATGCACTGGAG 60.602 60.000 0.00 0.00 33.92 3.86
3785 3834 1.447217 CCATCCGCTATGCACTGGA 59.553 57.895 0.00 0.00 33.92 3.86
3786 3835 2.256591 GCCATCCGCTATGCACTGG 61.257 63.158 0.00 0.00 33.92 4.00
3787 3836 3.337619 GCCATCCGCTATGCACTG 58.662 61.111 0.00 0.00 33.92 3.66
3796 3845 2.709475 CACGCTTTAGCCATCCGC 59.291 61.111 0.00 0.00 37.91 5.54
3797 3846 1.815421 AGCACGCTTTAGCCATCCG 60.815 57.895 0.00 0.00 37.91 4.18
3798 3847 0.744414 TCAGCACGCTTTAGCCATCC 60.744 55.000 0.00 0.00 37.91 3.51
3799 3848 0.654683 CTCAGCACGCTTTAGCCATC 59.345 55.000 0.00 0.00 37.91 3.51
3800 3849 0.250234 TCTCAGCACGCTTTAGCCAT 59.750 50.000 0.00 0.00 37.91 4.40
3801 3850 0.034756 TTCTCAGCACGCTTTAGCCA 59.965 50.000 0.00 0.00 37.91 4.75
3802 3851 1.063174 CATTCTCAGCACGCTTTAGCC 59.937 52.381 0.00 0.00 37.91 3.93
3803 3852 1.734465 ACATTCTCAGCACGCTTTAGC 59.266 47.619 0.00 0.00 37.78 3.09
3804 3853 2.995939 TGACATTCTCAGCACGCTTTAG 59.004 45.455 0.00 0.00 0.00 1.85
3805 3854 3.038788 TGACATTCTCAGCACGCTTTA 57.961 42.857 0.00 0.00 0.00 1.85
3806 3855 1.882912 TGACATTCTCAGCACGCTTT 58.117 45.000 0.00 0.00 0.00 3.51
3807 3856 1.802960 CTTGACATTCTCAGCACGCTT 59.197 47.619 0.00 0.00 0.00 4.68
3808 3857 1.001293 TCTTGACATTCTCAGCACGCT 59.999 47.619 0.00 0.00 0.00 5.07
3809 3858 1.392853 CTCTTGACATTCTCAGCACGC 59.607 52.381 0.00 0.00 0.00 5.34
3810 3859 2.922387 CTCTCTTGACATTCTCAGCACG 59.078 50.000 0.00 0.00 0.00 5.34
3811 3860 3.260740 CCTCTCTTGACATTCTCAGCAC 58.739 50.000 0.00 0.00 0.00 4.40
3812 3861 2.235650 CCCTCTCTTGACATTCTCAGCA 59.764 50.000 0.00 0.00 0.00 4.41
3813 3862 2.903798 CCCTCTCTTGACATTCTCAGC 58.096 52.381 0.00 0.00 0.00 4.26
3814 3863 2.235650 TGCCCTCTCTTGACATTCTCAG 59.764 50.000 0.00 0.00 0.00 3.35
3815 3864 2.235650 CTGCCCTCTCTTGACATTCTCA 59.764 50.000 0.00 0.00 0.00 3.27
3816 3865 2.419851 CCTGCCCTCTCTTGACATTCTC 60.420 54.545 0.00 0.00 0.00 2.87
3817 3866 1.558756 CCTGCCCTCTCTTGACATTCT 59.441 52.381 0.00 0.00 0.00 2.40
3818 3867 1.407989 CCCTGCCCTCTCTTGACATTC 60.408 57.143 0.00 0.00 0.00 2.67
3819 3868 0.622665 CCCTGCCCTCTCTTGACATT 59.377 55.000 0.00 0.00 0.00 2.71
3820 3869 0.548682 ACCCTGCCCTCTCTTGACAT 60.549 55.000 0.00 0.00 0.00 3.06
3821 3870 0.116342 TACCCTGCCCTCTCTTGACA 59.884 55.000 0.00 0.00 0.00 3.58
3822 3871 0.827368 CTACCCTGCCCTCTCTTGAC 59.173 60.000 0.00 0.00 0.00 3.18
3823 3872 0.710588 TCTACCCTGCCCTCTCTTGA 59.289 55.000 0.00 0.00 0.00 3.02
3824 3873 0.827368 GTCTACCCTGCCCTCTCTTG 59.173 60.000 0.00 0.00 0.00 3.02
3825 3874 0.325765 GGTCTACCCTGCCCTCTCTT 60.326 60.000 0.00 0.00 0.00 2.85
3826 3875 1.311747 GGTCTACCCTGCCCTCTCT 59.688 63.158 0.00 0.00 0.00 3.10
3827 3876 2.128507 CGGTCTACCCTGCCCTCTC 61.129 68.421 0.00 0.00 0.00 3.20
3828 3877 2.042843 CGGTCTACCCTGCCCTCT 60.043 66.667 0.00 0.00 0.00 3.69
3829 3878 1.049289 ATTCGGTCTACCCTGCCCTC 61.049 60.000 0.00 0.00 0.00 4.30
3830 3879 0.620700 AATTCGGTCTACCCTGCCCT 60.621 55.000 0.00 0.00 0.00 5.19
3831 3880 0.255033 AAATTCGGTCTACCCTGCCC 59.745 55.000 0.00 0.00 0.00 5.36
3832 3881 1.065709 TCAAATTCGGTCTACCCTGCC 60.066 52.381 0.00 0.00 0.00 4.85
3833 3882 2.007608 GTCAAATTCGGTCTACCCTGC 58.992 52.381 0.00 0.00 0.00 4.85
3834 3883 3.328382 TGTCAAATTCGGTCTACCCTG 57.672 47.619 0.00 0.00 0.00 4.45
3835 3884 3.370527 CCATGTCAAATTCGGTCTACCCT 60.371 47.826 0.00 0.00 0.00 4.34
3836 3885 2.943033 CCATGTCAAATTCGGTCTACCC 59.057 50.000 0.00 0.00 0.00 3.69
3837 3886 2.943033 CCCATGTCAAATTCGGTCTACC 59.057 50.000 0.00 0.00 0.00 3.18
3838 3887 3.869065 TCCCATGTCAAATTCGGTCTAC 58.131 45.455 0.00 0.00 0.00 2.59
3839 3888 3.118408 CCTCCCATGTCAAATTCGGTCTA 60.118 47.826 0.00 0.00 0.00 2.59
3840 3889 2.356125 CCTCCCATGTCAAATTCGGTCT 60.356 50.000 0.00 0.00 0.00 3.85
3841 3890 2.017049 CCTCCCATGTCAAATTCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
3842 3891 1.633432 TCCTCCCATGTCAAATTCGGT 59.367 47.619 0.00 0.00 0.00 4.69
3843 3892 2.292267 CTCCTCCCATGTCAAATTCGG 58.708 52.381 0.00 0.00 0.00 4.30
3844 3893 2.939103 GACTCCTCCCATGTCAAATTCG 59.061 50.000 0.00 0.00 0.00 3.34
3845 3894 3.282885 GGACTCCTCCCATGTCAAATTC 58.717 50.000 0.00 0.00 32.84 2.17
3846 3895 2.356125 CGGACTCCTCCCATGTCAAATT 60.356 50.000 0.00 0.00 31.93 1.82
3847 3896 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.00 31.93 2.32
3848 3897 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
3849 3898 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
3850 3899 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
3851 3900 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
3852 3901 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
3853 3902 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
3854 3903 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
3855 3904 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
3856 3905 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
3857 3906 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
3858 3907 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
3859 3908 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
3860 3909 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
3861 3910 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
3862 3911 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
3863 3912 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
3864 3913 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
3865 3914 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
3866 3915 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
3867 3916 5.423886 CCAATCCTTCAGGTCTCTCTTAAC 58.576 45.833 0.00 0.00 36.34 2.01
3868 3917 4.471386 CCCAATCCTTCAGGTCTCTCTTAA 59.529 45.833 0.00 0.00 36.34 1.85
3869 3918 4.033709 CCCAATCCTTCAGGTCTCTCTTA 58.966 47.826 0.00 0.00 36.34 2.10
3870 3919 2.843113 CCCAATCCTTCAGGTCTCTCTT 59.157 50.000 0.00 0.00 36.34 2.85
3871 3920 2.476199 CCCAATCCTTCAGGTCTCTCT 58.524 52.381 0.00 0.00 36.34 3.10
3872 3921 1.488393 CCCCAATCCTTCAGGTCTCTC 59.512 57.143 0.00 0.00 36.34 3.20
3873 3922 1.203492 ACCCCAATCCTTCAGGTCTCT 60.203 52.381 0.00 0.00 36.34 3.10
3874 3923 1.290134 ACCCCAATCCTTCAGGTCTC 58.710 55.000 0.00 0.00 36.34 3.36
3875 3924 2.661176 TACCCCAATCCTTCAGGTCT 57.339 50.000 0.00 0.00 36.34 3.85
3876 3925 2.777692 TGATACCCCAATCCTTCAGGTC 59.222 50.000 0.00 0.00 36.34 3.85
3877 3926 2.509964 GTGATACCCCAATCCTTCAGGT 59.490 50.000 0.00 0.00 36.34 4.00
3878 3927 2.158608 GGTGATACCCCAATCCTTCAGG 60.159 54.545 0.00 0.00 30.04 3.86
3879 3928 2.485479 CGGTGATACCCCAATCCTTCAG 60.485 54.545 0.00 0.00 33.75 3.02
3880 3929 1.488812 CGGTGATACCCCAATCCTTCA 59.511 52.381 0.00 0.00 33.75 3.02
3881 3930 1.766496 TCGGTGATACCCCAATCCTTC 59.234 52.381 0.00 0.00 33.75 3.46
3882 3931 1.887797 TCGGTGATACCCCAATCCTT 58.112 50.000 0.00 0.00 33.75 3.36
3883 3932 1.768870 CTTCGGTGATACCCCAATCCT 59.231 52.381 0.00 0.00 33.75 3.24
3884 3933 1.766496 TCTTCGGTGATACCCCAATCC 59.234 52.381 0.00 0.00 33.75 3.01
3885 3934 2.807108 GCTCTTCGGTGATACCCCAATC 60.807 54.545 0.00 0.00 33.75 2.67
3886 3935 1.141053 GCTCTTCGGTGATACCCCAAT 59.859 52.381 0.00 0.00 33.75 3.16
3887 3936 0.539986 GCTCTTCGGTGATACCCCAA 59.460 55.000 0.00 0.00 33.75 4.12
3888 3937 0.325296 AGCTCTTCGGTGATACCCCA 60.325 55.000 0.00 0.00 33.75 4.96
3889 3938 1.614413 CTAGCTCTTCGGTGATACCCC 59.386 57.143 0.00 0.00 33.75 4.95
3890 3939 1.000052 GCTAGCTCTTCGGTGATACCC 60.000 57.143 7.70 0.00 33.75 3.69
3891 3940 1.957877 AGCTAGCTCTTCGGTGATACC 59.042 52.381 12.68 0.00 34.05 2.73
3892 3941 4.380023 CCATAGCTAGCTCTTCGGTGATAC 60.380 50.000 23.26 0.00 0.00 2.24
3893 3942 3.759086 CCATAGCTAGCTCTTCGGTGATA 59.241 47.826 23.26 0.00 0.00 2.15
3894 3943 2.560542 CCATAGCTAGCTCTTCGGTGAT 59.439 50.000 23.26 3.19 0.00 3.06
3895 3944 1.957177 CCATAGCTAGCTCTTCGGTGA 59.043 52.381 23.26 0.28 0.00 4.02
3896 3945 1.957177 TCCATAGCTAGCTCTTCGGTG 59.043 52.381 23.26 11.17 0.00 4.94
3897 3946 1.957877 GTCCATAGCTAGCTCTTCGGT 59.042 52.381 23.26 0.00 0.00 4.69
3898 3947 1.957177 TGTCCATAGCTAGCTCTTCGG 59.043 52.381 23.26 16.90 0.00 4.30
3899 3948 2.030363 CCTGTCCATAGCTAGCTCTTCG 60.030 54.545 23.26 8.05 0.00 3.79
3900 3949 2.298729 CCCTGTCCATAGCTAGCTCTTC 59.701 54.545 23.26 9.20 0.00 2.87
3901 3950 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
3902 3951 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
3903 3952 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
3904 3953 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
3905 3954 2.841595 ACCCCTGTCCATAGCTAGC 58.158 57.895 6.62 6.62 0.00 3.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.