Multiple sequence alignment - TraesCS1B01G244400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G244400 chr1B 100.000 7831 0 0 1 7831 433607998 433600168 0.000000e+00 14462.0
1 TraesCS1B01G244400 chr1A 93.973 4845 202 45 864 5670 402252657 402257449 0.000000e+00 7247.0
2 TraesCS1B01G244400 chr1A 93.675 1581 64 14 5847 7420 402257448 402258999 0.000000e+00 2333.0
3 TraesCS1B01G244400 chr1A 86.596 470 52 7 284 743 402240855 402241323 7.010000e-140 508.0
4 TraesCS1B01G244400 chr1A 92.042 289 22 1 1 288 402238883 402239171 9.460000e-109 405.0
5 TraesCS1B01G244400 chr1D 84.348 2447 213 66 5071 7420 320588720 320586347 0.000000e+00 2241.0
6 TraesCS1B01G244400 chr1D 88.117 1944 154 28 864 2776 320593943 320592046 0.000000e+00 2239.0
7 TraesCS1B01G244400 chr1D 92.261 491 32 2 3170 3654 320591541 320591051 0.000000e+00 691.0
8 TraesCS1B01G244400 chr1D 82.329 730 82 20 1 716 320639037 320638341 2.430000e-164 590.0
9 TraesCS1B01G244400 chr1D 89.409 406 35 5 7433 7831 320586296 320585892 9.070000e-139 505.0
10 TraesCS1B01G244400 chr1D 81.532 666 56 34 3823 4432 320590991 320590337 3.280000e-133 486.0
11 TraesCS1B01G244400 chr1D 89.130 368 27 6 4662 5020 320589094 320588731 5.580000e-121 446.0
12 TraesCS1B01G244400 chr1D 90.800 250 17 3 4419 4662 320590281 320590032 5.860000e-86 329.0
13 TraesCS1B01G244400 chr1D 91.667 60 5 0 3704 3763 320591042 320590983 5.040000e-12 84.2
14 TraesCS1B01G244400 chr1D 94.737 38 1 1 713 749 320593990 320593953 3.050000e-04 58.4
15 TraesCS1B01G244400 chr6A 95.652 115 5 0 749 863 611451855 611451741 1.340000e-42 185.0
16 TraesCS1B01G244400 chr2B 94.783 115 6 0 749 863 202009645 202009531 6.240000e-41 180.0
17 TraesCS1B01G244400 chr7B 93.103 116 7 1 749 863 670209173 670209058 1.350000e-37 169.0
18 TraesCS1B01G244400 chr6D 92.920 113 7 1 749 861 318357205 318357316 6.290000e-36 163.0
19 TraesCS1B01G244400 chr5D 93.519 108 6 1 749 855 521186071 521186178 8.130000e-35 159.0
20 TraesCS1B01G244400 chr7A 91.304 115 10 0 749 863 657162914 657162800 2.930000e-34 158.0
21 TraesCS1B01G244400 chr2A 90.756 119 10 1 749 866 203895000 203894882 2.930000e-34 158.0
22 TraesCS1B01G244400 chr7D 90.517 116 10 1 749 863 483292070 483292185 1.360000e-32 152.0
23 TraesCS1B01G244400 chr5A 90.517 116 10 1 749 863 188988783 188988668 1.360000e-32 152.0
24 TraesCS1B01G244400 chr2D 87.273 55 6 1 2030 2083 179665119 179665065 2.360000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G244400 chr1B 433600168 433607998 7830 True 14462.000000 14462 100.000000 1 7831 1 chr1B.!!$R1 7830
1 TraesCS1B01G244400 chr1A 402252657 402258999 6342 False 4790.000000 7247 93.824000 864 7420 2 chr1A.!!$F2 6556
2 TraesCS1B01G244400 chr1A 402238883 402241323 2440 False 456.500000 508 89.319000 1 743 2 chr1A.!!$F1 742
3 TraesCS1B01G244400 chr1D 320585892 320593990 8098 True 786.622222 2241 89.111222 713 7831 9 chr1D.!!$R2 7118
4 TraesCS1B01G244400 chr1D 320638341 320639037 696 True 590.000000 590 82.329000 1 716 1 chr1D.!!$R1 715

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 2043 0.536724 CCCAGTCATGATGGTCGTCA 59.463 55.000 17.56 0.0 35.96 4.35 F
1338 3060 1.002011 GCTTCCCCACTTCTGACCC 60.002 63.158 0.00 0.0 0.00 4.46 F
1346 3068 0.038744 CACTTCTGACCCATTGGCCT 59.961 55.000 3.32 0.0 33.59 5.19 F
1697 3426 0.182537 TGCTGGTTGGTTAGTGCAGT 59.817 50.000 0.00 0.0 0.00 4.40 F
1698 3427 0.593128 GCTGGTTGGTTAGTGCAGTG 59.407 55.000 3.69 0.0 0.00 3.66 F
2750 4507 1.204146 GCTGGGATCCTGACCTAACA 58.796 55.000 12.58 0.0 0.00 2.41 F
3477 5407 0.472471 AGCAAAGTTGGTCCCTCGAA 59.528 50.000 0.00 0.0 32.71 3.71 F
3892 5822 0.324943 ATGGACTGAACCTGAACCGG 59.675 55.000 0.00 0.0 0.00 5.28 F
5068 8073 1.134280 CAGCCCACCTAGAACAGATGG 60.134 57.143 0.00 0.0 0.00 3.51 F
5756 8812 0.179119 CGGGCTACGTAGGAAAGTGG 60.179 60.000 23.47 0.0 37.93 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1343 3065 0.036875 AGGAACAGCTACCAACAGGC 59.963 55.000 6.55 0.00 0.00 4.85 R
2147 3901 0.179018 GGTTTGCACCTGTCCTCACT 60.179 55.000 0.00 0.00 40.44 3.41 R
2728 4484 0.268869 TAGGTCAGGATCCCAGCCAT 59.731 55.000 8.55 0.00 0.00 4.40 R
2750 4507 1.462426 TGAATTGGGGGTTGGTAGGT 58.538 50.000 0.00 0.00 0.00 3.08 R
3015 4773 3.393089 AATCCATTACAGGAGCTAGCG 57.607 47.619 9.55 0.00 41.90 4.26 R
3888 5818 1.003233 CTGAAGTTAGAAAGGGCCGGT 59.997 52.381 1.90 0.00 0.00 5.28 R
4894 7894 0.546122 TATGCCTCAATTCGCCTGGT 59.454 50.000 0.00 0.00 0.00 4.00 R
5681 8737 0.033796 CCTAGGTCGGTGGTACTCCA 60.034 60.000 0.00 0.00 43.09 3.86 R
6585 9670 0.463654 GTGTCGGGCAGCCATTGATA 60.464 55.000 15.19 3.24 0.00 2.15 R
7494 10660 0.170339 GCGGCCATCCTAACAAACAC 59.830 55.000 2.24 0.00 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 6.151648 TCAAAGAATTAATGGTTGCAGGAGAG 59.848 38.462 0.00 0.00 0.00 3.20
96 97 2.576615 GTTGCAGGAGAGTTGTTTCCT 58.423 47.619 0.00 0.00 44.59 3.36
98 99 2.575532 TGCAGGAGAGTTGTTTCCTTG 58.424 47.619 0.00 0.00 41.86 3.61
108 109 6.872920 AGAGTTGTTTCCTTGCAATTACAAA 58.127 32.000 0.00 0.00 0.00 2.83
220 233 1.064296 CGTCGATGAGACCCCTTCG 59.936 63.158 0.00 0.00 46.92 3.79
239 252 1.068352 GGGCATCAACCCCTCCCTAT 61.068 60.000 0.00 0.00 45.00 2.57
241 254 1.630878 GGCATCAACCCCTCCCTATAG 59.369 57.143 0.00 0.00 0.00 1.31
329 2032 1.639635 GCACCCTCCATCCCAGTCAT 61.640 60.000 0.00 0.00 0.00 3.06
340 2043 0.536724 CCCAGTCATGATGGTCGTCA 59.463 55.000 17.56 0.00 35.96 4.35
341 2044 1.066215 CCCAGTCATGATGGTCGTCAA 60.066 52.381 17.56 0.00 35.96 3.18
356 2059 3.063180 GTCGTCAAATTCTCCAGCATGAG 59.937 47.826 0.00 0.00 39.69 2.90
378 2081 2.912025 CAAGTGCGGCCAAAGGGT 60.912 61.111 2.24 0.00 36.17 4.34
436 2139 1.587043 CTCTCGACCGGCTCAGTTCA 61.587 60.000 0.00 0.00 0.00 3.18
448 2151 2.103263 GCTCAGTTCATAAGGATCGGGT 59.897 50.000 0.00 0.00 0.00 5.28
461 2164 2.168728 GGATCGGGTGGCTCTATAATCC 59.831 54.545 0.00 0.00 0.00 3.01
462 2165 1.640917 TCGGGTGGCTCTATAATCCC 58.359 55.000 0.00 0.00 0.00 3.85
509 2214 3.660669 TCCCTAGGTTCCTGGATGTTTTT 59.339 43.478 8.29 0.00 0.00 1.94
514 2219 4.479158 AGGTTCCTGGATGTTTTTGCTTA 58.521 39.130 0.00 0.00 0.00 3.09
522 2227 4.757657 TGGATGTTTTTGCTTAGAGCGTTA 59.242 37.500 0.00 0.00 46.26 3.18
523 2228 5.414454 TGGATGTTTTTGCTTAGAGCGTTAT 59.586 36.000 0.00 0.00 46.26 1.89
525 2230 6.806739 GGATGTTTTTGCTTAGAGCGTTATTT 59.193 34.615 0.00 0.00 46.26 1.40
542 2247 1.529226 TTTGCATGACGTGGTTAGGG 58.471 50.000 0.00 0.00 0.00 3.53
548 2253 3.343617 CATGACGTGGTTAGGGAAATGT 58.656 45.455 0.00 0.00 0.00 2.71
555 2260 4.306600 GTGGTTAGGGAAATGTGCAAAAG 58.693 43.478 0.00 0.00 0.00 2.27
558 2263 6.013379 TGGTTAGGGAAATGTGCAAAAGATA 58.987 36.000 0.00 0.00 0.00 1.98
559 2264 6.152661 TGGTTAGGGAAATGTGCAAAAGATAG 59.847 38.462 0.00 0.00 0.00 2.08
560 2265 6.377146 GGTTAGGGAAATGTGCAAAAGATAGA 59.623 38.462 0.00 0.00 0.00 1.98
562 2267 6.916360 AGGGAAATGTGCAAAAGATAGAAA 57.084 33.333 0.00 0.00 0.00 2.52
615 2327 6.839124 ATGTCACTCTAAAAATTGGCATCA 57.161 33.333 0.00 0.00 27.96 3.07
623 2335 6.913170 TCTAAAAATTGGCATCACACTTCTC 58.087 36.000 0.00 0.00 0.00 2.87
624 2336 5.796424 AAAAATTGGCATCACACTTCTCT 57.204 34.783 0.00 0.00 0.00 3.10
635 2347 3.502595 TCACACTTCTCTCACTCTTACCG 59.497 47.826 0.00 0.00 0.00 4.02
654 2366 8.767085 TCTTACCGTTTTAGTGTATCACAAAAG 58.233 33.333 2.80 0.00 36.74 2.27
657 2369 6.068931 CCGTTTTAGTGTATCACAAAAGTCG 58.931 40.000 2.80 7.58 36.74 4.18
658 2370 6.068931 CGTTTTAGTGTATCACAAAAGTCGG 58.931 40.000 2.80 0.00 36.74 4.79
671 2383 2.432628 GTCGGTCCGAGTGGCAAG 60.433 66.667 15.95 0.00 36.23 4.01
675 2387 1.519455 GGTCCGAGTGGCAAGATCG 60.519 63.158 10.13 10.13 36.24 3.69
682 2394 3.119849 CCGAGTGGCAAGATCGAAATTTT 60.120 43.478 16.67 0.00 38.72 1.82
749 2461 5.069516 AGAGTGGCAAAAGTGAAATGTCAAT 59.930 36.000 0.00 0.00 34.87 2.57
750 2462 5.051816 AGTGGCAAAAGTGAAATGTCAATG 58.948 37.500 0.00 0.00 34.87 2.82
751 2463 3.808726 TGGCAAAAGTGAAATGTCAATGC 59.191 39.130 5.92 5.92 34.87 3.56
753 2465 4.512571 GGCAAAAGTGAAATGTCAATGCTT 59.487 37.500 11.67 0.00 34.87 3.91
754 2466 5.007921 GGCAAAAGTGAAATGTCAATGCTTT 59.992 36.000 11.67 4.77 34.87 3.51
755 2467 6.458615 GGCAAAAGTGAAATGTCAATGCTTTT 60.459 34.615 6.81 6.81 37.75 2.27
758 2470 7.412137 AAAGTGAAATGTCAATGCTTTTAGC 57.588 32.000 0.00 0.00 37.33 3.09
759 2471 6.336842 AGTGAAATGTCAATGCTTTTAGCT 57.663 33.333 0.00 0.00 37.57 3.32
760 2472 6.385033 AGTGAAATGTCAATGCTTTTAGCTC 58.615 36.000 0.00 0.00 37.57 4.09
761 2473 6.208204 AGTGAAATGTCAATGCTTTTAGCTCT 59.792 34.615 0.00 0.00 37.57 4.09
762 2474 7.391554 AGTGAAATGTCAATGCTTTTAGCTCTA 59.608 33.333 0.00 0.00 37.57 2.43
763 2475 7.695618 GTGAAATGTCAATGCTTTTAGCTCTAG 59.304 37.037 0.00 0.00 37.57 2.43
764 2476 7.391554 TGAAATGTCAATGCTTTTAGCTCTAGT 59.608 33.333 0.00 0.00 42.97 2.57
765 2477 8.792830 AAATGTCAATGCTTTTAGCTCTAGTA 57.207 30.769 0.00 0.00 42.97 1.82
766 2478 7.778470 ATGTCAATGCTTTTAGCTCTAGTAC 57.222 36.000 0.00 0.00 42.97 2.73
767 2479 6.106673 TGTCAATGCTTTTAGCTCTAGTACC 58.893 40.000 0.00 0.00 42.97 3.34
768 2480 6.070767 TGTCAATGCTTTTAGCTCTAGTACCT 60.071 38.462 0.00 0.00 42.97 3.08
769 2481 6.477360 GTCAATGCTTTTAGCTCTAGTACCTC 59.523 42.308 0.00 0.00 42.97 3.85
770 2482 6.381420 TCAATGCTTTTAGCTCTAGTACCTCT 59.619 38.462 0.00 0.00 42.97 3.69
771 2483 6.800072 ATGCTTTTAGCTCTAGTACCTCTT 57.200 37.500 0.00 0.00 42.97 2.85
772 2484 5.967088 TGCTTTTAGCTCTAGTACCTCTTG 58.033 41.667 0.00 0.00 42.97 3.02
773 2485 5.480772 TGCTTTTAGCTCTAGTACCTCTTGT 59.519 40.000 0.00 0.00 42.97 3.16
774 2486 5.808030 GCTTTTAGCTCTAGTACCTCTTGTG 59.192 44.000 0.00 0.00 38.45 3.33
775 2487 6.572703 GCTTTTAGCTCTAGTACCTCTTGTGT 60.573 42.308 0.00 0.00 38.45 3.72
776 2488 6.912951 TTTAGCTCTAGTACCTCTTGTGTT 57.087 37.500 0.00 0.00 0.00 3.32
777 2489 6.912951 TTAGCTCTAGTACCTCTTGTGTTT 57.087 37.500 0.00 0.00 0.00 2.83
778 2490 5.140747 AGCTCTAGTACCTCTTGTGTTTG 57.859 43.478 0.00 0.00 0.00 2.93
779 2491 4.021016 AGCTCTAGTACCTCTTGTGTTTGG 60.021 45.833 0.00 0.00 0.00 3.28
780 2492 4.822026 CTCTAGTACCTCTTGTGTTTGGG 58.178 47.826 0.00 0.00 0.00 4.12
781 2493 4.485875 TCTAGTACCTCTTGTGTTTGGGA 58.514 43.478 0.00 0.00 0.00 4.37
782 2494 5.091552 TCTAGTACCTCTTGTGTTTGGGAT 58.908 41.667 0.00 0.00 0.00 3.85
783 2495 4.021102 AGTACCTCTTGTGTTTGGGATG 57.979 45.455 0.00 0.00 0.00 3.51
784 2496 3.650942 AGTACCTCTTGTGTTTGGGATGA 59.349 43.478 0.00 0.00 0.00 2.92
785 2497 3.814504 ACCTCTTGTGTTTGGGATGAT 57.185 42.857 0.00 0.00 0.00 2.45
786 2498 4.927267 ACCTCTTGTGTTTGGGATGATA 57.073 40.909 0.00 0.00 0.00 2.15
787 2499 5.456921 ACCTCTTGTGTTTGGGATGATAT 57.543 39.130 0.00 0.00 0.00 1.63
788 2500 5.440610 ACCTCTTGTGTTTGGGATGATATC 58.559 41.667 0.00 0.00 0.00 1.63
805 2517 9.171877 GGATGATATCCCTGACTTTATTTCATC 57.828 37.037 0.00 0.00 43.88 2.92
806 2518 9.956640 GATGATATCCCTGACTTTATTTCATCT 57.043 33.333 0.00 0.00 35.60 2.90
808 2520 9.784531 TGATATCCCTGACTTTATTTCATCTTC 57.215 33.333 0.00 0.00 0.00 2.87
809 2521 9.225436 GATATCCCTGACTTTATTTCATCTTCC 57.775 37.037 0.00 0.00 0.00 3.46
810 2522 5.755849 TCCCTGACTTTATTTCATCTTCCC 58.244 41.667 0.00 0.00 0.00 3.97
811 2523 5.492524 TCCCTGACTTTATTTCATCTTCCCT 59.507 40.000 0.00 0.00 0.00 4.20
812 2524 6.011628 TCCCTGACTTTATTTCATCTTCCCTT 60.012 38.462 0.00 0.00 0.00 3.95
813 2525 6.096001 CCCTGACTTTATTTCATCTTCCCTTG 59.904 42.308 0.00 0.00 0.00 3.61
814 2526 6.660949 CCTGACTTTATTTCATCTTCCCTTGT 59.339 38.462 0.00 0.00 0.00 3.16
815 2527 7.829211 CCTGACTTTATTTCATCTTCCCTTGTA 59.171 37.037 0.00 0.00 0.00 2.41
816 2528 9.231297 CTGACTTTATTTCATCTTCCCTTGTAA 57.769 33.333 0.00 0.00 0.00 2.41
817 2529 9.581289 TGACTTTATTTCATCTTCCCTTGTAAA 57.419 29.630 0.00 0.00 0.00 2.01
824 2536 8.884124 TTTCATCTTCCCTTGTAAATGATCTT 57.116 30.769 0.00 0.00 0.00 2.40
825 2537 8.884124 TTCATCTTCCCTTGTAAATGATCTTT 57.116 30.769 0.00 0.00 0.00 2.52
826 2538 8.511604 TCATCTTCCCTTGTAAATGATCTTTC 57.488 34.615 0.00 0.00 0.00 2.62
827 2539 7.557719 TCATCTTCCCTTGTAAATGATCTTTCC 59.442 37.037 0.00 0.00 0.00 3.13
828 2540 6.789268 TCTTCCCTTGTAAATGATCTTTCCA 58.211 36.000 0.00 0.00 0.00 3.53
829 2541 7.413446 TCTTCCCTTGTAAATGATCTTTCCAT 58.587 34.615 0.00 0.00 0.00 3.41
830 2542 7.895429 TCTTCCCTTGTAAATGATCTTTCCATT 59.105 33.333 0.00 0.00 35.92 3.16
831 2543 9.189156 CTTCCCTTGTAAATGATCTTTCCATTA 57.811 33.333 0.00 0.00 33.51 1.90
832 2544 9.713684 TTCCCTTGTAAATGATCTTTCCATTAT 57.286 29.630 0.00 0.00 33.51 1.28
833 2545 9.713684 TCCCTTGTAAATGATCTTTCCATTATT 57.286 29.630 0.00 0.00 33.51 1.40
856 2568 7.572523 TTTGATGAACAAAGTCTCTTGATGT 57.427 32.000 0.00 0.00 42.57 3.06
857 2569 8.675705 TTTGATGAACAAAGTCTCTTGATGTA 57.324 30.769 0.00 0.00 42.57 2.29
858 2570 8.675705 TTGATGAACAAAGTCTCTTGATGTAA 57.324 30.769 0.00 0.00 35.39 2.41
859 2571 8.675705 TGATGAACAAAGTCTCTTGATGTAAA 57.324 30.769 0.00 0.00 0.00 2.01
860 2572 9.119418 TGATGAACAAAGTCTCTTGATGTAAAA 57.881 29.630 0.00 0.00 0.00 1.52
861 2573 9.950680 GATGAACAAAGTCTCTTGATGTAAAAA 57.049 29.630 0.00 0.00 0.00 1.94
1306 3028 2.511373 TAATCACAGCCGCGCCTG 60.511 61.111 16.52 16.52 38.78 4.85
1317 3039 2.964978 GCGCCTGGCAAACATTCT 59.035 55.556 20.29 0.00 42.87 2.40
1338 3060 1.002011 GCTTCCCCACTTCTGACCC 60.002 63.158 0.00 0.00 0.00 4.46
1339 3061 1.779061 GCTTCCCCACTTCTGACCCA 61.779 60.000 0.00 0.00 0.00 4.51
1343 3065 0.323725 CCCCACTTCTGACCCATTGG 60.324 60.000 0.00 0.00 37.80 3.16
1344 3066 0.967380 CCCACTTCTGACCCATTGGC 60.967 60.000 0.00 0.00 33.59 4.52
1345 3067 0.967380 CCACTTCTGACCCATTGGCC 60.967 60.000 0.00 0.00 33.59 5.36
1346 3068 0.038744 CACTTCTGACCCATTGGCCT 59.961 55.000 3.32 0.00 33.59 5.19
1348 3070 0.038744 CTTCTGACCCATTGGCCTGT 59.961 55.000 3.32 0.00 33.59 4.00
1422 3147 2.021457 GTATGGTTGGTCGAAATGGGG 58.979 52.381 0.00 0.00 0.00 4.96
1497 3225 3.119424 TGAAAGTTTGAAACGGGTTCCAC 60.119 43.478 2.85 0.30 35.12 4.02
1501 3229 0.547075 TTGAAACGGGTTCCACTGGA 59.453 50.000 2.85 0.00 35.12 3.86
1519 3247 1.228552 AATTTGGTGGCAGCGTCCT 60.229 52.632 12.58 0.00 0.00 3.85
1525 3253 1.648467 GGTGGCAGCGTCCTCATTTC 61.648 60.000 0.00 0.00 0.00 2.17
1543 3271 7.443575 CCTCATTTCTCTTCTTTTCTGTCAGAA 59.556 37.037 11.36 11.36 31.28 3.02
1544 3272 8.375608 TCATTTCTCTTCTTTTCTGTCAGAAG 57.624 34.615 14.75 5.39 45.15 2.85
1546 3274 7.778470 TTTCTCTTCTTTTCTGTCAGAAGAC 57.222 36.000 14.75 0.00 46.61 3.01
1563 3291 1.515521 GACAGGGCGTTCAGGTTTGG 61.516 60.000 0.00 0.00 0.00 3.28
1565 3293 1.528309 AGGGCGTTCAGGTTTGGTG 60.528 57.895 0.00 0.00 0.00 4.17
1567 3295 1.527380 GGCGTTCAGGTTTGGTGGA 60.527 57.895 0.00 0.00 0.00 4.02
1570 3298 0.310854 CGTTCAGGTTTGGTGGAAGC 59.689 55.000 0.00 0.00 0.00 3.86
1574 3302 1.202879 TCAGGTTTGGTGGAAGCGAAT 60.203 47.619 0.00 0.00 40.30 3.34
1595 3323 0.598065 AACATGGCCTTTCGCTTCAC 59.402 50.000 3.32 0.00 37.74 3.18
1632 3360 5.063180 TCAGCTGTGATTGGCTATTTTTG 57.937 39.130 14.67 0.00 37.00 2.44
1658 3387 7.935338 ATTCGTTTATGAATGATTTGGATGC 57.065 32.000 0.00 0.00 37.20 3.91
1668 3397 0.819259 ATTTGGATGCGGTCGGATGG 60.819 55.000 1.44 0.00 0.00 3.51
1671 3400 1.071471 GGATGCGGTCGGATGGAAT 59.929 57.895 1.44 0.00 0.00 3.01
1681 3410 3.209410 GTCGGATGGAATGATTTCTGCT 58.791 45.455 0.00 0.00 32.16 4.24
1689 3418 3.259123 GGAATGATTTCTGCTGGTTGGTT 59.741 43.478 0.00 0.00 32.16 3.67
1690 3419 4.462483 GGAATGATTTCTGCTGGTTGGTTA 59.538 41.667 0.00 0.00 32.16 2.85
1691 3420 5.393461 GGAATGATTTCTGCTGGTTGGTTAG 60.393 44.000 0.00 0.00 32.16 2.34
1692 3421 4.098914 TGATTTCTGCTGGTTGGTTAGT 57.901 40.909 0.00 0.00 0.00 2.24
1693 3422 3.820467 TGATTTCTGCTGGTTGGTTAGTG 59.180 43.478 0.00 0.00 0.00 2.74
1694 3423 1.604604 TTCTGCTGGTTGGTTAGTGC 58.395 50.000 0.00 0.00 0.00 4.40
1695 3424 0.472044 TCTGCTGGTTGGTTAGTGCA 59.528 50.000 0.00 0.00 0.00 4.57
1696 3425 0.877071 CTGCTGGTTGGTTAGTGCAG 59.123 55.000 0.00 0.00 41.15 4.41
1697 3426 0.182537 TGCTGGTTGGTTAGTGCAGT 59.817 50.000 0.00 0.00 0.00 4.40
1698 3427 0.593128 GCTGGTTGGTTAGTGCAGTG 59.407 55.000 3.69 0.00 0.00 3.66
1710 3439 1.352352 AGTGCAGTGTTTAGGCAGGAT 59.648 47.619 0.00 0.00 38.38 3.24
1734 3464 9.450807 GATCCATTTATGTTCGTTAGGAATTTG 57.549 33.333 0.00 0.00 36.92 2.32
1796 3526 7.819415 TCTTTATTATTAGAGATGATGTGGCCG 59.181 37.037 0.00 0.00 0.00 6.13
1843 3573 6.775629 AGTTTGGAACCATAGTATGTGTTGTT 59.224 34.615 16.82 10.52 0.00 2.83
1924 3657 8.507249 CCAAAACTTTTCAGACTCTTATAGTGG 58.493 37.037 0.00 0.00 39.07 4.00
1934 3667 8.372459 TCAGACTCTTATAGTGGCTTTGTTTTA 58.628 33.333 0.00 0.00 39.07 1.52
2042 3779 4.251268 GAGGACCACAGTTTTATTAGCGT 58.749 43.478 0.00 0.00 0.00 5.07
2143 3897 3.450457 TGCCATAGCCCACCATTTAAAAG 59.550 43.478 0.00 0.00 38.69 2.27
2147 3901 6.351456 GCCATAGCCCACCATTTAAAAGTTTA 60.351 38.462 0.00 0.00 0.00 2.01
2178 3932 3.123050 GGTGCAAACCAAAGAACATGTC 58.877 45.455 0.00 0.00 0.00 3.06
2203 3957 6.588348 CGTGTAGCAATTTCATGATCAGTA 57.412 37.500 0.09 0.00 0.00 2.74
2258 4012 6.126409 CCAATTCTATAACTAAGGGCCAACA 58.874 40.000 6.18 0.00 0.00 3.33
2290 4044 2.483491 GCTATGCTTAGCTGATTCTGGC 59.517 50.000 21.12 0.00 46.13 4.85
2294 4048 1.472376 GCTTAGCTGATTCTGGCGAGT 60.472 52.381 0.00 0.00 0.00 4.18
2317 4071 4.286032 TCCTGTGTTAGTAAGTGCTTCCAT 59.714 41.667 0.00 0.00 0.00 3.41
2465 4221 4.981806 TTTTGAGGTGTTTCTGTCTTGG 57.018 40.909 0.00 0.00 0.00 3.61
2473 4229 4.580580 GGTGTTTCTGTCTTGGAAGTTCAT 59.419 41.667 5.01 0.00 0.00 2.57
2527 4283 4.922206 TGAAAATACTGGCACCTCAGAAT 58.078 39.130 0.00 0.00 38.11 2.40
2562 4318 2.890945 ACAATAAGCCAAACAGTCCCAC 59.109 45.455 0.00 0.00 0.00 4.61
2595 4351 6.152661 TGGTTATTTCATGTTTCTGGATCCAC 59.847 38.462 11.44 1.07 0.00 4.02
2598 4354 2.972625 TCATGTTTCTGGATCCACGTC 58.027 47.619 11.44 2.53 0.00 4.34
2624 4380 9.133627 CGTGTTCTTATCTCCATTCTATGTATG 57.866 37.037 0.00 0.00 0.00 2.39
2728 4484 2.449464 CTTGTTTGGGATGCCTGATCA 58.551 47.619 4.35 0.00 31.91 2.92
2750 4507 1.204146 GCTGGGATCCTGACCTAACA 58.796 55.000 12.58 0.00 0.00 2.41
2816 4573 6.238484 CCAAACAAGACCTAAGTTGAGACTTG 60.238 42.308 13.54 13.54 45.46 3.16
2830 4587 6.614906 AGTTGAGACTTGAGATATCCAGGATT 59.385 38.462 7.44 0.00 29.87 3.01
2877 4635 4.079844 TCAATTTCATGTCTGGCTATCCCA 60.080 41.667 0.00 0.00 42.79 4.37
2879 4637 3.565764 TTCATGTCTGGCTATCCCAAG 57.434 47.619 0.00 0.00 44.81 3.61
2987 4745 6.810182 GATGTTGTCCAATTGGAAAAGATGAG 59.190 38.462 33.82 4.95 43.23 2.90
3039 4797 5.509840 CGCTAGCTCCTGTAATGGATTACTT 60.510 44.000 13.93 0.00 42.32 2.24
3046 4804 9.120538 GCTCCTGTAATGGATTACTTTATTCAA 57.879 33.333 10.19 0.00 42.32 2.69
3110 4871 4.828939 TGCTAGCATCAATAAATGAAGGGG 59.171 41.667 14.93 0.00 42.54 4.79
3192 5116 7.823745 ATTATGCAAAAGTCCGATCCTATTT 57.176 32.000 0.00 0.00 0.00 1.40
3477 5407 0.472471 AGCAAAGTTGGTCCCTCGAA 59.528 50.000 0.00 0.00 32.71 3.71
3691 5621 6.215121 TCTTGTTTCCAAGTGTTGCAATATG 58.785 36.000 0.59 0.00 46.70 1.78
3786 5716 4.098349 TCATTATTGGATGCCTTGAACAGC 59.902 41.667 0.00 0.00 0.00 4.40
3787 5717 1.927487 ATTGGATGCCTTGAACAGCA 58.073 45.000 0.00 0.00 44.45 4.41
3789 5719 1.927487 TGGATGCCTTGAACAGCAAT 58.073 45.000 0.00 0.00 43.36 3.56
3859 5789 1.002430 TCTCACAGATGTGTTCAGGCC 59.998 52.381 12.43 0.00 45.76 5.19
3864 5794 3.006110 CACAGATGTGTTCAGGCCAAATT 59.994 43.478 5.01 0.00 40.96 1.82
3865 5795 4.218200 CACAGATGTGTTCAGGCCAAATTA 59.782 41.667 5.01 0.00 40.96 1.40
3866 5796 5.018809 ACAGATGTGTTCAGGCCAAATTAT 58.981 37.500 5.01 0.00 30.30 1.28
3885 5815 9.354673 CAAATTATAATACCATGGACTGAACCT 57.645 33.333 21.47 0.00 0.00 3.50
3887 5817 7.684317 TTATAATACCATGGACTGAACCTGA 57.316 36.000 21.47 0.00 0.00 3.86
3888 5818 4.927267 AATACCATGGACTGAACCTGAA 57.073 40.909 21.47 0.00 0.00 3.02
3890 5820 1.073923 ACCATGGACTGAACCTGAACC 59.926 52.381 21.47 0.00 0.00 3.62
3891 5821 1.442769 CATGGACTGAACCTGAACCG 58.557 55.000 0.00 0.00 0.00 4.44
3892 5822 0.324943 ATGGACTGAACCTGAACCGG 59.675 55.000 0.00 0.00 0.00 5.28
3894 5824 1.671379 GACTGAACCTGAACCGGCC 60.671 63.158 0.00 0.00 0.00 6.13
3895 5825 2.359975 CTGAACCTGAACCGGCCC 60.360 66.667 0.00 0.00 0.00 5.80
3896 5826 2.852075 TGAACCTGAACCGGCCCT 60.852 61.111 0.00 0.00 0.00 5.19
3897 5827 2.411765 CTGAACCTGAACCGGCCCTT 62.412 60.000 0.00 0.00 0.00 3.95
3898 5828 1.228459 GAACCTGAACCGGCCCTTT 60.228 57.895 0.00 0.00 0.00 3.11
3899 5829 1.228459 AACCTGAACCGGCCCTTTC 60.228 57.895 0.00 0.00 0.00 2.62
3900 5830 1.716028 AACCTGAACCGGCCCTTTCT 61.716 55.000 0.00 0.00 0.00 2.52
3955 5885 1.925285 GATGTGCACATCCCCCTCCA 61.925 60.000 38.64 8.61 45.24 3.86
4095 6045 3.120786 CGGGTAGAACTACAAACTTTGCG 60.121 47.826 12.94 0.00 37.78 4.85
4350 6333 4.095483 GCTGTTGACTGCATGCTAATACTT 59.905 41.667 20.33 0.00 40.06 2.24
4385 6368 7.823799 TCTGATATTCTTCACATACTGCAAACA 59.176 33.333 0.00 0.00 0.00 2.83
4566 6621 3.412237 TTTAGGCTTACACCGAAAGCT 57.588 42.857 7.65 0.00 46.81 3.74
4616 6673 2.079170 TTTTGCTGGGAATGTGTGGA 57.921 45.000 0.00 0.00 0.00 4.02
4643 6701 6.998673 AGCCAACTAGATTTTGTACTTCTTGT 59.001 34.615 0.00 0.00 0.00 3.16
4876 7876 5.825151 CACTCTCCCAGTTTTTCTCTCTTTT 59.175 40.000 0.00 0.00 30.26 2.27
4877 7877 6.992715 CACTCTCCCAGTTTTTCTCTCTTTTA 59.007 38.462 0.00 0.00 30.26 1.52
4973 7978 7.497909 CGGTGTGATAAGATTACCACCTAAAAT 59.502 37.037 0.00 0.00 0.00 1.82
5037 8042 1.757118 TCAAGATAACCCGCTCTCCAG 59.243 52.381 0.00 0.00 0.00 3.86
5068 8073 1.134280 CAGCCCACCTAGAACAGATGG 60.134 57.143 0.00 0.00 0.00 3.51
5131 8136 1.266718 CCAACGAAACCAGTGACATGG 59.733 52.381 0.00 0.48 46.47 3.66
5143 8148 2.439507 AGTGACATGGACAAAGTGACCT 59.560 45.455 0.00 0.00 33.37 3.85
5224 8235 3.381908 CCTCTGTGACCCTAGTGTATGTC 59.618 52.174 0.00 0.00 0.00 3.06
5342 8353 5.123186 TGAAGTTTATGTTTGGCTATGTCCG 59.877 40.000 0.00 0.00 0.00 4.79
5392 8422 2.851195 CCATACAACTGGTATCTGGGC 58.149 52.381 0.00 0.00 40.76 5.36
5393 8423 2.172505 CCATACAACTGGTATCTGGGCA 59.827 50.000 0.00 0.00 40.76 5.36
5394 8424 3.181440 CCATACAACTGGTATCTGGGCAT 60.181 47.826 0.00 0.00 40.76 4.40
5395 8425 4.041567 CCATACAACTGGTATCTGGGCATA 59.958 45.833 0.00 0.00 40.76 3.14
5396 8426 3.560636 ACAACTGGTATCTGGGCATAC 57.439 47.619 0.00 0.00 0.00 2.39
5397 8427 2.843730 ACAACTGGTATCTGGGCATACA 59.156 45.455 0.00 0.00 31.68 2.29
5398 8428 3.265737 ACAACTGGTATCTGGGCATACAA 59.734 43.478 0.00 0.00 31.68 2.41
5399 8429 3.560636 ACTGGTATCTGGGCATACAAC 57.439 47.619 0.00 0.00 31.68 3.32
5400 8430 3.115390 ACTGGTATCTGGGCATACAACT 58.885 45.455 0.00 0.00 31.68 3.16
5448 8478 8.506168 TGGGAAATCTGATGTTGAATTAGTAC 57.494 34.615 0.00 0.00 0.00 2.73
5480 8524 3.751175 GCTAGTACATTGTTGCACCTCAA 59.249 43.478 0.00 0.00 0.00 3.02
5501 8545 5.349270 TCAATTTACAAGGACGATTACACCG 59.651 40.000 0.00 0.00 0.00 4.94
5530 8574 5.538849 TTTTGGAAATGGGGTAGTTTGAC 57.461 39.130 0.00 0.00 0.00 3.18
5536 8580 5.280830 GGAAATGGGGTAGTTTGACCTTCTA 60.281 44.000 0.00 0.00 39.66 2.10
5596 8652 7.549134 TGCACAAGAGTAATTGATGGTAGTAAG 59.451 37.037 0.00 0.00 34.20 2.34
5675 8731 2.298610 GTTTATACAGGGCCTGGAAGC 58.701 52.381 35.34 22.98 35.51 3.86
5676 8732 1.893315 TTATACAGGGCCTGGAAGCT 58.107 50.000 35.34 16.85 35.51 3.74
5681 8737 0.769873 CAGGGCCTGGAAGCTCATAT 59.230 55.000 26.34 0.00 34.85 1.78
5683 8739 0.251077 GGGCCTGGAAGCTCATATGG 60.251 60.000 0.84 0.00 31.68 2.74
5703 8759 1.211457 GAGTACCACCGACCTAGGAGA 59.789 57.143 17.98 0.00 34.73 3.71
5705 8761 1.955080 GTACCACCGACCTAGGAGATG 59.045 57.143 17.98 6.07 34.73 2.90
5719 8775 2.941453 GAGATGTACGCTCCAGTTCA 57.059 50.000 4.64 0.00 0.00 3.18
5740 8796 1.064685 AGGATAAGGAAACCTTGCGGG 60.065 52.381 12.56 0.00 44.44 6.13
5741 8797 0.738975 GATAAGGAAACCTTGCGGGC 59.261 55.000 12.56 0.00 44.44 6.13
5756 8812 0.179119 CGGGCTACGTAGGAAAGTGG 60.179 60.000 23.47 0.00 37.93 4.00
5760 8816 1.134491 GCTACGTAGGAAAGTGGCCAT 60.134 52.381 23.47 0.00 38.64 4.40
5762 8818 0.690762 ACGTAGGAAAGTGGCCATGT 59.309 50.000 9.72 0.00 0.00 3.21
5777 8833 2.205074 CCATGTGTTCTACTCGCATCC 58.795 52.381 0.00 0.00 34.42 3.51
5778 8834 2.418609 CCATGTGTTCTACTCGCATCCA 60.419 50.000 0.00 0.00 34.42 3.41
5798 8854 3.630054 CCAGTCTGGACTCCTACCCATAA 60.630 52.174 14.26 0.00 40.96 1.90
5809 8865 3.139077 CCTACCCATAAACGATGAAGGC 58.861 50.000 0.00 0.00 37.82 4.35
5811 8867 3.297134 ACCCATAAACGATGAAGGCAT 57.703 42.857 0.00 0.00 37.82 4.40
5824 8880 1.753073 GAAGGCATTGACATGAAGGGG 59.247 52.381 0.00 0.00 31.07 4.79
5834 8890 2.777692 GACATGAAGGGGGAGATTACCA 59.222 50.000 0.00 0.00 0.00 3.25
5841 8897 1.420430 GGGGAGATTACCACCATCGA 58.580 55.000 0.00 0.00 0.00 3.59
5843 8899 1.344763 GGGAGATTACCACCATCGAGG 59.655 57.143 0.00 0.00 45.67 4.63
5848 8904 2.447408 TTACCACCATCGAGGAGCTA 57.553 50.000 0.00 0.00 41.22 3.32
5854 8910 4.707448 ACCACCATCGAGGAGCTATATAAG 59.293 45.833 0.00 0.00 41.22 1.73
5895 8951 1.000396 GGGCCAAGCAATCCAGAGT 60.000 57.895 4.39 0.00 0.00 3.24
5934 8990 3.743521 TCATGGTGCATATTGCCTAGAC 58.256 45.455 0.00 0.00 44.23 2.59
5991 9047 5.086104 TGCTGGATCTACTCTTTGTAACC 57.914 43.478 0.00 0.00 0.00 2.85
6002 9058 9.624373 TCTACTCTTTGTAACCGATATTAGTCT 57.376 33.333 0.00 0.00 0.00 3.24
6054 9110 0.400525 AAGGCAGGAGCAGGGCTATA 60.401 55.000 0.00 0.00 44.61 1.31
6069 9125 1.813862 GCTATAACCCATGCAAGCGGA 60.814 52.381 0.00 0.00 0.00 5.54
6120 9177 0.972983 CCTCGGTGACCTGAGGTGAT 60.973 60.000 24.77 0.00 45.48 3.06
6171 9230 2.632544 CCGTACCGCTGTGAGGTCA 61.633 63.158 0.00 0.00 42.81 4.02
6574 9659 7.571080 AAAATTGCATGGTTCTTGTGAAATT 57.429 28.000 0.00 0.00 33.52 1.82
6575 9660 7.571080 AAATTGCATGGTTCTTGTGAAATTT 57.429 28.000 0.00 0.00 33.52 1.82
6576 9661 5.987777 TTGCATGGTTCTTGTGAAATTTG 57.012 34.783 0.00 0.00 33.52 2.32
6577 9662 5.021033 TGCATGGTTCTTGTGAAATTTGT 57.979 34.783 0.00 0.00 33.52 2.83
6578 9663 5.426504 TGCATGGTTCTTGTGAAATTTGTT 58.573 33.333 0.00 0.00 33.52 2.83
6579 9664 5.293814 TGCATGGTTCTTGTGAAATTTGTTG 59.706 36.000 0.00 0.00 33.52 3.33
6580 9665 5.294060 GCATGGTTCTTGTGAAATTTGTTGT 59.706 36.000 0.00 0.00 33.52 3.32
6581 9666 6.707711 CATGGTTCTTGTGAAATTTGTTGTG 58.292 36.000 0.00 0.00 33.52 3.33
6582 9667 6.030548 TGGTTCTTGTGAAATTTGTTGTGA 57.969 33.333 0.00 0.00 33.52 3.58
6583 9668 6.459066 TGGTTCTTGTGAAATTTGTTGTGAA 58.541 32.000 0.00 0.00 33.52 3.18
6584 9669 6.931281 TGGTTCTTGTGAAATTTGTTGTGAAA 59.069 30.769 0.00 0.00 33.52 2.69
6585 9670 7.605691 TGGTTCTTGTGAAATTTGTTGTGAAAT 59.394 29.630 0.00 0.00 33.52 2.17
6598 9683 4.114794 GTTGTGAAATATCAATGGCTGCC 58.885 43.478 12.87 12.87 37.30 4.85
6664 9761 3.006659 TGCATGTAAAGTTTCGTTGGC 57.993 42.857 0.00 0.00 0.00 4.52
6758 9855 5.994286 GCGTTTGCTCCCATGAATATGGAA 61.994 45.833 7.85 0.00 46.58 3.53
6805 9902 2.347490 GCCAGAAGCCAGGACGAA 59.653 61.111 0.00 0.00 34.35 3.85
6815 9912 1.739067 CCAGGACGAATCAGGGTTTC 58.261 55.000 0.00 0.00 0.00 2.78
6827 9924 3.719816 GGGTTTCCCTCGACAAACT 57.280 52.632 8.87 0.00 41.34 2.66
6852 9966 4.593206 AGAAACTAACTCTGGTCCACATGA 59.407 41.667 0.00 0.00 0.00 3.07
6858 9972 0.034186 TCTGGTCCACATGATTGGGC 60.034 55.000 0.00 0.00 40.92 5.36
6917 10031 1.277273 CAAGTCCCTGAGATCAGCACA 59.723 52.381 4.23 0.00 42.47 4.57
6930 10051 2.789213 TCAGCACAATTCGGATTTCCA 58.211 42.857 0.00 0.00 35.14 3.53
7014 10135 6.068010 ACAATAAGTGATTTGGTGACCAGAA 58.932 36.000 3.77 3.04 33.81 3.02
7087 10208 1.148310 CGATTGCCGAGTCTTTGTGT 58.852 50.000 0.00 0.00 41.76 3.72
7146 10271 5.434408 TGAAAATGAGATGAGAGGTGATGG 58.566 41.667 0.00 0.00 0.00 3.51
7152 10277 0.844660 ATGAGAGGTGATGGCATGCT 59.155 50.000 18.92 0.00 0.00 3.79
7176 10301 7.425595 GCTTTTTATGTTCGTTGATGTAGTAGC 59.574 37.037 0.00 0.00 0.00 3.58
7196 10321 4.833390 AGCACTACAGTTTATCCTTGTCC 58.167 43.478 0.00 0.00 0.00 4.02
7209 10334 3.399330 TCCTTGTCCGTCAAAATGAGAC 58.601 45.455 0.00 0.00 35.48 3.36
7228 10353 7.024340 TGAGACGAGTGTAACATAAGATACC 57.976 40.000 0.00 0.00 41.43 2.73
7252 10377 0.894835 CCCTATTTTGCCTTTGCGGT 59.105 50.000 0.00 0.00 41.78 5.68
7313 10441 5.664457 TCAATGCAGTCCACTAGTTCTATG 58.336 41.667 0.00 0.00 0.00 2.23
7319 10447 5.683509 GCAGTCCACTAGTTCTATGATGCTT 60.684 44.000 0.00 0.00 0.00 3.91
7348 10476 7.631161 GCATTTCATTCACCCTTGATTGTGATA 60.631 37.037 0.00 0.00 40.88 2.15
7360 10488 6.921857 CCTTGATTGTGATAAGAATTGCCATC 59.078 38.462 0.00 0.00 0.00 3.51
7361 10489 6.395426 TGATTGTGATAAGAATTGCCATCC 57.605 37.500 0.00 0.00 0.00 3.51
7362 10490 6.131264 TGATTGTGATAAGAATTGCCATCCT 58.869 36.000 0.00 0.00 0.00 3.24
7363 10491 5.840243 TTGTGATAAGAATTGCCATCCTG 57.160 39.130 0.00 0.00 0.00 3.86
7365 10493 4.641541 TGTGATAAGAATTGCCATCCTGTG 59.358 41.667 0.00 0.00 0.00 3.66
7366 10494 4.641989 GTGATAAGAATTGCCATCCTGTGT 59.358 41.667 0.00 0.00 0.00 3.72
7367 10495 4.641541 TGATAAGAATTGCCATCCTGTGTG 59.358 41.667 0.00 0.00 0.00 3.82
7368 10496 1.180029 AGAATTGCCATCCTGTGTGC 58.820 50.000 0.00 0.00 0.00 4.57
7369 10497 1.180029 GAATTGCCATCCTGTGTGCT 58.820 50.000 0.00 0.00 0.00 4.40
7370 10498 2.025981 AGAATTGCCATCCTGTGTGCTA 60.026 45.455 0.00 0.00 0.00 3.49
7371 10499 2.048444 ATTGCCATCCTGTGTGCTAG 57.952 50.000 0.00 0.00 0.00 3.42
7372 10500 0.692476 TTGCCATCCTGTGTGCTAGT 59.308 50.000 0.00 0.00 0.00 2.57
7373 10501 1.567357 TGCCATCCTGTGTGCTAGTA 58.433 50.000 0.00 0.00 0.00 1.82
7420 10548 3.240302 ACGGGGAGGGAGTATGATTTAG 58.760 50.000 0.00 0.00 0.00 1.85
7422 10550 4.140853 ACGGGGAGGGAGTATGATTTAGTA 60.141 45.833 0.00 0.00 0.00 1.82
7423 10551 5.024118 CGGGGAGGGAGTATGATTTAGTAT 58.976 45.833 0.00 0.00 0.00 2.12
7424 10552 6.192773 CGGGGAGGGAGTATGATTTAGTATA 58.807 44.000 0.00 0.00 0.00 1.47
7426 10554 8.003044 CGGGGAGGGAGTATGATTTAGTATATA 58.997 40.741 0.00 0.00 0.00 0.86
7428 10556 9.939424 GGGAGGGAGTATGATTTAGTATATACT 57.061 37.037 19.07 19.07 38.63 2.12
7489 10655 3.627577 CGATTCCCCTTAGTTGGATGTTG 59.372 47.826 0.00 0.00 0.00 3.33
7490 10656 4.625324 CGATTCCCCTTAGTTGGATGTTGA 60.625 45.833 0.00 0.00 0.00 3.18
7492 10658 4.028993 TCCCCTTAGTTGGATGTTGAAC 57.971 45.455 0.00 0.00 0.00 3.18
7493 10659 3.655777 TCCCCTTAGTTGGATGTTGAACT 59.344 43.478 0.00 0.00 36.40 3.01
7494 10660 3.758554 CCCCTTAGTTGGATGTTGAACTG 59.241 47.826 0.00 0.00 34.28 3.16
7500 10671 4.997565 AGTTGGATGTTGAACTGTGTTTG 58.002 39.130 0.00 0.00 31.09 2.93
7507 10678 6.016276 GGATGTTGAACTGTGTTTGTTAGGAT 60.016 38.462 0.00 0.00 0.00 3.24
7509 10680 5.067153 TGTTGAACTGTGTTTGTTAGGATGG 59.933 40.000 0.00 0.00 0.00 3.51
7510 10681 3.568007 TGAACTGTGTTTGTTAGGATGGC 59.432 43.478 0.00 0.00 0.00 4.40
7511 10682 2.514803 ACTGTGTTTGTTAGGATGGCC 58.485 47.619 0.00 0.00 0.00 5.36
7527 10698 4.925068 GATGGCCGCATCCAAATATTATC 58.075 43.478 0.00 0.00 39.96 1.75
7528 10699 2.746904 TGGCCGCATCCAAATATTATCG 59.253 45.455 0.00 0.00 32.18 2.92
7538 10711 8.292448 GCATCCAAATATTATCGTGTCAATCTT 58.708 33.333 0.00 0.00 0.00 2.40
7580 10753 5.688807 ACTAAATGATCTGATCAACCAGGG 58.311 41.667 22.91 13.42 43.50 4.45
7600 10773 5.047021 CAGGGTATCAGACTGAAGAAACTGA 60.047 44.000 9.70 0.00 42.26 3.41
7612 10785 6.201044 ACTGAAGAAACTGAAATACACACGAG 59.799 38.462 0.00 0.00 0.00 4.18
7614 10787 6.759356 TGAAGAAACTGAAATACACACGAGAA 59.241 34.615 0.00 0.00 0.00 2.87
7627 10800 4.508124 ACACACGAGAAACAAACATCTCTC 59.492 41.667 0.00 0.00 39.92 3.20
7631 10804 7.063898 CACACGAGAAACAAACATCTCTCATAT 59.936 37.037 0.00 0.00 39.92 1.78
7688 10861 1.203994 GTAGCCGAGTGGTCTAAAGCA 59.796 52.381 0.00 0.00 37.67 3.91
7697 10870 1.300481 GGTCTAAAGCAGGGAATCGC 58.700 55.000 0.00 0.00 0.00 4.58
7698 10871 0.931005 GTCTAAAGCAGGGAATCGCG 59.069 55.000 0.00 0.00 0.00 5.87
7700 10873 2.094126 CTAAAGCAGGGAATCGCGCG 62.094 60.000 26.76 26.76 34.07 6.86
7729 10902 1.076024 AGGACCATTGGTGAGCATGTT 59.924 47.619 14.44 0.00 35.25 2.71
7751 10924 2.750350 CGGCAACTTGGGAGGACT 59.250 61.111 0.00 0.00 0.00 3.85
7752 10925 1.672356 CGGCAACTTGGGAGGACTG 60.672 63.158 0.00 0.00 0.00 3.51
7793 10966 3.691342 CGAGAGCACCGGGTTGGA 61.691 66.667 6.32 0.00 42.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.442666 GCTAATGTTCTTATCCCTTAAGAGTGG 59.557 40.741 3.36 0.00 45.40 4.00
87 88 7.043059 TCGATTTTGTAATTGCAAGGAAACAAC 60.043 33.333 4.94 1.30 0.00 3.32
96 97 6.942886 GACCATTCGATTTTGTAATTGCAA 57.057 33.333 0.00 0.00 0.00 4.08
225 238 3.273886 TGAAGACTATAGGGAGGGGTTGA 59.726 47.826 4.43 0.00 0.00 3.18
228 241 4.038633 GTTTGAAGACTATAGGGAGGGGT 58.961 47.826 4.43 0.00 0.00 4.95
239 252 5.939883 CCATCTGGATGTTGTTTGAAGACTA 59.060 40.000 9.35 0.00 37.11 2.59
241 254 4.761739 TCCATCTGGATGTTGTTTGAAGAC 59.238 41.667 9.35 0.00 39.78 3.01
290 1993 1.191535 CCGGTAGGTCATCTTGGTCA 58.808 55.000 0.00 0.00 0.00 4.02
329 2032 3.599343 CTGGAGAATTTGACGACCATCA 58.401 45.455 0.00 0.00 0.00 3.07
334 2037 3.002791 TCATGCTGGAGAATTTGACGAC 58.997 45.455 0.00 0.00 0.00 4.34
340 2043 3.022406 GCTTCCTCATGCTGGAGAATTT 58.978 45.455 6.75 0.00 37.05 1.82
341 2044 2.025605 TGCTTCCTCATGCTGGAGAATT 60.026 45.455 6.75 0.00 37.05 2.17
356 2059 2.753931 CTTTGGCCGCACTTGCTTCC 62.754 60.000 0.00 1.03 39.32 3.46
378 2081 1.374505 GCCTTGCACGGTTACGGTA 60.375 57.895 11.38 0.00 46.48 4.02
416 2119 1.303398 AACTGAGCCGGTCGAGAGA 60.303 57.895 1.90 0.00 38.16 3.10
424 2127 2.760374 GATCCTTATGAACTGAGCCGG 58.240 52.381 0.00 0.00 0.00 6.13
436 2139 2.696526 TAGAGCCACCCGATCCTTAT 57.303 50.000 0.00 0.00 0.00 1.73
448 2151 1.611977 CACGACGGGATTATAGAGCCA 59.388 52.381 0.00 0.00 34.70 4.75
461 2164 1.078759 GGAGCTCATGTTCACGACGG 61.079 60.000 17.19 0.00 0.00 4.79
462 2165 0.109086 AGGAGCTCATGTTCACGACG 60.109 55.000 17.19 0.00 0.00 5.12
509 2214 3.938334 TCATGCAAATAACGCTCTAAGCA 59.062 39.130 0.00 0.00 42.58 3.91
514 2219 2.094258 CACGTCATGCAAATAACGCTCT 59.906 45.455 11.76 0.00 38.64 4.09
522 2227 2.091541 CCCTAACCACGTCATGCAAAT 58.908 47.619 0.00 0.00 0.00 2.32
523 2228 1.072489 TCCCTAACCACGTCATGCAAA 59.928 47.619 0.00 0.00 0.00 3.68
525 2230 0.687920 TTCCCTAACCACGTCATGCA 59.312 50.000 0.00 0.00 0.00 3.96
542 2247 8.816144 TGTGTTTTTCTATCTTTTGCACATTTC 58.184 29.630 0.00 0.00 30.71 2.17
555 2260 8.012241 GGCGAATGATAGATGTGTTTTTCTATC 58.988 37.037 11.29 11.29 45.77 2.08
558 2263 5.066505 GGGCGAATGATAGATGTGTTTTTCT 59.933 40.000 0.00 0.00 0.00 2.52
559 2264 5.163663 TGGGCGAATGATAGATGTGTTTTTC 60.164 40.000 0.00 0.00 0.00 2.29
560 2265 4.704540 TGGGCGAATGATAGATGTGTTTTT 59.295 37.500 0.00 0.00 0.00 1.94
562 2267 3.884895 TGGGCGAATGATAGATGTGTTT 58.115 40.909 0.00 0.00 0.00 2.83
578 2290 4.396166 AGAGTGACATAAGAAAAATGGGCG 59.604 41.667 0.00 0.00 0.00 6.13
610 2322 3.591196 AGAGTGAGAGAAGTGTGATGC 57.409 47.619 0.00 0.00 0.00 3.91
615 2327 3.488363 ACGGTAAGAGTGAGAGAAGTGT 58.512 45.455 0.00 0.00 0.00 3.55
623 2335 7.272948 GTGATACACTAAAACGGTAAGAGTGAG 59.727 40.741 17.85 0.00 39.94 3.51
624 2336 7.086376 GTGATACACTAAAACGGTAAGAGTGA 58.914 38.462 17.85 6.88 39.94 3.41
635 2347 6.951643 ACCGACTTTTGTGATACACTAAAAC 58.048 36.000 11.07 8.27 38.22 2.43
654 2366 2.227089 ATCTTGCCACTCGGACCGAC 62.227 60.000 13.88 3.63 0.00 4.79
657 2369 1.519455 CGATCTTGCCACTCGGACC 60.519 63.158 0.00 0.00 0.00 4.46
658 2370 0.108804 TTCGATCTTGCCACTCGGAC 60.109 55.000 0.00 0.00 33.38 4.79
685 2397 9.660180 TGGCATAAACAAAATTAATTTACCCTC 57.340 29.630 13.68 0.35 0.00 4.30
749 2461 5.480772 ACAAGAGGTACTAGAGCTAAAAGCA 59.519 40.000 0.00 0.00 41.98 3.91
750 2462 5.808030 CACAAGAGGTACTAGAGCTAAAAGC 59.192 44.000 0.00 0.00 41.55 3.51
751 2463 6.926313 ACACAAGAGGTACTAGAGCTAAAAG 58.074 40.000 0.00 0.00 41.55 2.27
753 2465 6.912951 AACACAAGAGGTACTAGAGCTAAA 57.087 37.500 0.00 0.00 41.55 1.85
754 2466 6.295123 CCAAACACAAGAGGTACTAGAGCTAA 60.295 42.308 0.00 0.00 41.55 3.09
755 2467 5.185249 CCAAACACAAGAGGTACTAGAGCTA 59.815 44.000 0.00 0.00 41.55 3.32
758 2470 4.527038 TCCCAAACACAAGAGGTACTAGAG 59.473 45.833 0.00 0.00 41.55 2.43
759 2471 4.485875 TCCCAAACACAAGAGGTACTAGA 58.514 43.478 0.00 0.00 41.55 2.43
760 2472 4.884668 TCCCAAACACAAGAGGTACTAG 57.115 45.455 0.00 0.00 41.55 2.57
761 2473 4.841813 TCATCCCAAACACAAGAGGTACTA 59.158 41.667 0.00 0.00 41.55 1.82
763 2475 4.015872 TCATCCCAAACACAAGAGGTAC 57.984 45.455 0.00 0.00 0.00 3.34
764 2476 4.927267 ATCATCCCAAACACAAGAGGTA 57.073 40.909 0.00 0.00 0.00 3.08
765 2477 3.814504 ATCATCCCAAACACAAGAGGT 57.185 42.857 0.00 0.00 0.00 3.85
766 2478 4.823989 GGATATCATCCCAAACACAAGAGG 59.176 45.833 4.83 0.00 43.88 3.69
780 2492 9.956640 AGATGAAATAAAGTCAGGGATATCATC 57.043 33.333 4.83 0.00 39.61 2.92
782 2494 9.784531 GAAGATGAAATAAAGTCAGGGATATCA 57.215 33.333 4.83 0.00 0.00 2.15
783 2495 9.225436 GGAAGATGAAATAAAGTCAGGGATATC 57.775 37.037 0.00 0.00 0.00 1.63
784 2496 8.166726 GGGAAGATGAAATAAAGTCAGGGATAT 58.833 37.037 0.00 0.00 0.00 1.63
785 2497 7.350921 AGGGAAGATGAAATAAAGTCAGGGATA 59.649 37.037 0.00 0.00 0.00 2.59
786 2498 6.161170 AGGGAAGATGAAATAAAGTCAGGGAT 59.839 38.462 0.00 0.00 0.00 3.85
787 2499 5.492524 AGGGAAGATGAAATAAAGTCAGGGA 59.507 40.000 0.00 0.00 0.00 4.20
788 2500 5.760131 AGGGAAGATGAAATAAAGTCAGGG 58.240 41.667 0.00 0.00 0.00 4.45
789 2501 6.660949 ACAAGGGAAGATGAAATAAAGTCAGG 59.339 38.462 0.00 0.00 0.00 3.86
790 2502 7.693969 ACAAGGGAAGATGAAATAAAGTCAG 57.306 36.000 0.00 0.00 0.00 3.51
791 2503 9.581289 TTTACAAGGGAAGATGAAATAAAGTCA 57.419 29.630 0.00 0.00 0.00 3.41
798 2510 9.484806 AAGATCATTTACAAGGGAAGATGAAAT 57.515 29.630 0.00 0.00 0.00 2.17
799 2511 8.884124 AAGATCATTTACAAGGGAAGATGAAA 57.116 30.769 0.00 0.00 0.00 2.69
800 2512 8.884124 AAAGATCATTTACAAGGGAAGATGAA 57.116 30.769 0.00 0.00 0.00 2.57
801 2513 7.557719 GGAAAGATCATTTACAAGGGAAGATGA 59.442 37.037 0.00 0.00 0.00 2.92
802 2514 7.340232 TGGAAAGATCATTTACAAGGGAAGATG 59.660 37.037 0.00 0.00 0.00 2.90
803 2515 7.413446 TGGAAAGATCATTTACAAGGGAAGAT 58.587 34.615 0.00 0.00 0.00 2.40
804 2516 6.789268 TGGAAAGATCATTTACAAGGGAAGA 58.211 36.000 0.00 0.00 0.00 2.87
805 2517 7.651027 ATGGAAAGATCATTTACAAGGGAAG 57.349 36.000 6.64 0.00 0.00 3.46
806 2518 9.713684 ATAATGGAAAGATCATTTACAAGGGAA 57.286 29.630 6.64 0.00 36.40 3.97
807 2519 9.713684 AATAATGGAAAGATCATTTACAAGGGA 57.286 29.630 6.64 0.00 36.40 4.20
821 2533 9.912634 GACTTTGTTCATCAAATAATGGAAAGA 57.087 29.630 0.00 0.00 43.78 2.52
822 2534 9.918630 AGACTTTGTTCATCAAATAATGGAAAG 57.081 29.630 0.00 0.00 43.78 2.62
823 2535 9.912634 GAGACTTTGTTCATCAAATAATGGAAA 57.087 29.630 0.00 0.00 43.78 3.13
824 2536 9.300681 AGAGACTTTGTTCATCAAATAATGGAA 57.699 29.630 0.00 0.00 43.78 3.53
825 2537 8.868522 AGAGACTTTGTTCATCAAATAATGGA 57.131 30.769 0.00 0.00 43.78 3.41
826 2538 9.350357 CAAGAGACTTTGTTCATCAAATAATGG 57.650 33.333 0.00 0.00 43.78 3.16
830 2542 9.288576 ACATCAAGAGACTTTGTTCATCAAATA 57.711 29.630 0.00 0.00 43.78 1.40
831 2543 8.174733 ACATCAAGAGACTTTGTTCATCAAAT 57.825 30.769 0.00 0.00 43.78 2.32
832 2544 7.572523 ACATCAAGAGACTTTGTTCATCAAA 57.427 32.000 0.00 0.00 42.79 2.69
833 2545 8.675705 TTACATCAAGAGACTTTGTTCATCAA 57.324 30.769 0.00 0.00 0.00 2.57
834 2546 8.675705 TTTACATCAAGAGACTTTGTTCATCA 57.324 30.769 0.00 0.00 0.00 3.07
835 2547 9.950680 TTTTTACATCAAGAGACTTTGTTCATC 57.049 29.630 0.00 0.00 0.00 2.92
923 2637 5.222130 GGGCCAGGAATTATTAGGAGATTCA 60.222 44.000 4.39 0.00 32.72 2.57
924 2638 5.014649 AGGGCCAGGAATTATTAGGAGATTC 59.985 44.000 6.18 0.00 0.00 2.52
925 2639 4.922613 AGGGCCAGGAATTATTAGGAGATT 59.077 41.667 6.18 0.00 0.00 2.40
1080 2802 2.892425 GCCTTCTGCGACCATCCG 60.892 66.667 0.00 0.00 0.00 4.18
1083 2805 4.473520 CGGGCCTTCTGCGACCAT 62.474 66.667 0.84 0.00 42.61 3.55
1306 3028 0.733909 GGAAGCGCAGAATGTTTGCC 60.734 55.000 11.47 0.00 39.31 4.52
1312 3034 0.962356 AAGTGGGGAAGCGCAGAATG 60.962 55.000 11.47 0.00 40.87 2.67
1317 3039 2.032528 CAGAAGTGGGGAAGCGCA 59.967 61.111 11.47 0.00 0.00 6.09
1338 3060 0.813184 CAGCTACCAACAGGCCAATG 59.187 55.000 5.01 0.00 0.00 2.82
1339 3061 0.405585 ACAGCTACCAACAGGCCAAT 59.594 50.000 5.01 0.00 0.00 3.16
1343 3065 0.036875 AGGAACAGCTACCAACAGGC 59.963 55.000 6.55 0.00 0.00 4.85
1344 3066 2.224523 TGAAGGAACAGCTACCAACAGG 60.225 50.000 6.55 0.00 0.00 4.00
1345 3067 3.126001 TGAAGGAACAGCTACCAACAG 57.874 47.619 6.55 0.00 0.00 3.16
1346 3068 3.211045 GTTGAAGGAACAGCTACCAACA 58.789 45.455 0.00 3.75 34.35 3.33
1348 3070 2.488347 GGGTTGAAGGAACAGCTACCAA 60.488 50.000 6.55 0.00 36.12 3.67
1387 3112 1.754803 CCATACAGAGACGCCTAACCA 59.245 52.381 0.00 0.00 0.00 3.67
1388 3113 1.755380 ACCATACAGAGACGCCTAACC 59.245 52.381 0.00 0.00 0.00 2.85
1398 3123 3.623060 CCATTTCGACCAACCATACAGAG 59.377 47.826 0.00 0.00 0.00 3.35
1422 3147 0.095417 GTTTCGCTCGGAGCAATCAC 59.905 55.000 27.83 15.00 42.58 3.06
1497 3225 1.213537 CGCTGCCACCAAATTCCAG 59.786 57.895 0.00 0.00 0.00 3.86
1501 3229 1.228552 AGGACGCTGCCACCAAATT 60.229 52.632 11.30 0.00 0.00 1.82
1543 3271 0.535102 CAAACCTGAACGCCCTGTCT 60.535 55.000 0.00 0.00 0.00 3.41
1544 3272 1.515521 CCAAACCTGAACGCCCTGTC 61.516 60.000 0.00 0.00 0.00 3.51
1545 3273 1.528309 CCAAACCTGAACGCCCTGT 60.528 57.895 0.00 0.00 0.00 4.00
1546 3274 1.528309 ACCAAACCTGAACGCCCTG 60.528 57.895 0.00 0.00 0.00 4.45
1547 3275 1.528309 CACCAAACCTGAACGCCCT 60.528 57.895 0.00 0.00 0.00 5.19
1548 3276 2.561037 CCACCAAACCTGAACGCCC 61.561 63.158 0.00 0.00 0.00 6.13
1549 3277 1.104577 TTCCACCAAACCTGAACGCC 61.105 55.000 0.00 0.00 0.00 5.68
1550 3278 0.310854 CTTCCACCAAACCTGAACGC 59.689 55.000 0.00 0.00 0.00 4.84
1551 3279 0.310854 GCTTCCACCAAACCTGAACG 59.689 55.000 0.00 0.00 0.00 3.95
1563 3291 2.479560 GGCCATGTTAATTCGCTTCCAC 60.480 50.000 0.00 0.00 0.00 4.02
1565 3293 2.024414 AGGCCATGTTAATTCGCTTCC 58.976 47.619 5.01 0.00 0.00 3.46
1567 3295 3.427503 CGAAAGGCCATGTTAATTCGCTT 60.428 43.478 5.01 0.00 34.17 4.68
1570 3298 2.097466 AGCGAAAGGCCATGTTAATTCG 59.903 45.455 5.01 10.18 45.17 3.34
1574 3302 2.227865 GTGAAGCGAAAGGCCATGTTAA 59.772 45.455 5.01 0.00 45.17 2.01
1611 3339 4.813027 ACAAAAATAGCCAATCACAGCTG 58.187 39.130 13.48 13.48 40.28 4.24
1612 3340 6.780457 ATACAAAAATAGCCAATCACAGCT 57.220 33.333 0.00 0.00 43.20 4.24
1613 3341 6.197096 CGAATACAAAAATAGCCAATCACAGC 59.803 38.462 0.00 0.00 0.00 4.40
1632 3360 8.905702 GCATCCAAATCATTCATAAACGAATAC 58.094 33.333 0.00 0.00 33.82 1.89
1658 3387 2.545526 CAGAAATCATTCCATCCGACCG 59.454 50.000 0.00 0.00 36.12 4.79
1668 3397 4.525912 AACCAACCAGCAGAAATCATTC 57.474 40.909 0.00 0.00 35.70 2.67
1671 3400 3.820467 CACTAACCAACCAGCAGAAATCA 59.180 43.478 0.00 0.00 0.00 2.57
1681 3410 2.428544 AACACTGCACTAACCAACCA 57.571 45.000 0.00 0.00 0.00 3.67
1689 3418 1.974957 TCCTGCCTAAACACTGCACTA 59.025 47.619 0.00 0.00 0.00 2.74
1690 3419 0.764890 TCCTGCCTAAACACTGCACT 59.235 50.000 0.00 0.00 0.00 4.40
1691 3420 1.740025 GATCCTGCCTAAACACTGCAC 59.260 52.381 0.00 0.00 0.00 4.57
1692 3421 1.340017 GGATCCTGCCTAAACACTGCA 60.340 52.381 3.84 0.00 0.00 4.41
1693 3422 1.340017 TGGATCCTGCCTAAACACTGC 60.340 52.381 14.23 0.00 0.00 4.40
1694 3423 2.787473 TGGATCCTGCCTAAACACTG 57.213 50.000 14.23 0.00 0.00 3.66
1695 3424 4.322057 AAATGGATCCTGCCTAAACACT 57.678 40.909 14.23 0.00 0.00 3.55
1696 3425 5.594317 ACATAAATGGATCCTGCCTAAACAC 59.406 40.000 14.23 0.00 0.00 3.32
1697 3426 5.765510 ACATAAATGGATCCTGCCTAAACA 58.234 37.500 14.23 0.00 0.00 2.83
1698 3427 6.513393 CGAACATAAATGGATCCTGCCTAAAC 60.513 42.308 14.23 0.00 0.00 2.01
1710 3439 7.147983 CCCAAATTCCTAACGAACATAAATGGA 60.148 37.037 0.00 0.00 31.79 3.41
1796 3526 1.131883 GTGCATGATGACTGCCAGAAC 59.868 52.381 0.00 0.00 38.89 3.01
1805 3535 3.921119 TCCAAACTTGTGCATGATGAC 57.079 42.857 0.00 0.00 0.00 3.06
1806 3536 3.005684 GGTTCCAAACTTGTGCATGATGA 59.994 43.478 0.00 0.00 0.00 2.92
1807 3537 3.243805 TGGTTCCAAACTTGTGCATGATG 60.244 43.478 0.00 0.00 0.00 3.07
1843 3573 7.337938 TCTATAACTCAAGTTGCATCCATTCA 58.662 34.615 5.66 0.00 38.90 2.57
1879 3610 5.491323 TTGGTCAATAGTACCACATGTCA 57.509 39.130 0.00 0.00 46.56 3.58
2007 3741 3.740115 GTGGTCCTCACAGTTAACATGT 58.260 45.455 8.61 6.62 45.39 3.21
2143 3897 2.543777 TGCACCTGTCCTCACTAAAC 57.456 50.000 0.00 0.00 0.00 2.01
2147 3901 0.179018 GGTTTGCACCTGTCCTCACT 60.179 55.000 0.00 0.00 40.44 3.41
2178 3932 2.804421 TCATGAAATTGCTACACGCG 57.196 45.000 3.53 3.53 43.27 6.01
2203 3957 0.409092 TGTCCCCATCCAAAGCATGT 59.591 50.000 0.00 0.00 0.00 3.21
2248 4002 3.631250 CCTATGTTATGTGTTGGCCCTT 58.369 45.455 0.00 0.00 0.00 3.95
2280 4034 0.534412 ACAGGACTCGCCAGAATCAG 59.466 55.000 0.00 0.00 40.02 2.90
2290 4044 3.057456 AGCACTTACTAACACAGGACTCG 60.057 47.826 0.00 0.00 0.00 4.18
2294 4048 3.644265 TGGAAGCACTTACTAACACAGGA 59.356 43.478 0.00 0.00 0.00 3.86
2465 4221 3.858503 GCAAAAGGCTCCACATGAACTTC 60.859 47.826 0.00 0.00 40.25 3.01
2492 4248 6.389906 CCAGTATTTTCAATGAAGTTGGTCC 58.610 40.000 0.00 0.00 38.39 4.46
2562 4318 8.017373 CAGAAACATGAAATAACCACAGTACAG 58.983 37.037 0.00 0.00 0.00 2.74
2571 4327 6.564328 GTGGATCCAGAAACATGAAATAACC 58.436 40.000 16.81 0.00 0.00 2.85
2595 4351 4.673441 AGAATGGAGATAAGAACACGACG 58.327 43.478 0.00 0.00 0.00 5.12
2598 4354 9.133627 CATACATAGAATGGAGATAAGAACACG 57.866 37.037 0.00 0.00 33.60 4.49
2624 4380 4.990426 CCCAAACAAACATCTCATCCAAAC 59.010 41.667 0.00 0.00 0.00 2.93
2728 4484 0.268869 TAGGTCAGGATCCCAGCCAT 59.731 55.000 8.55 0.00 0.00 4.40
2750 4507 1.462426 TGAATTGGGGGTTGGTAGGT 58.538 50.000 0.00 0.00 0.00 3.08
2816 4573 8.477256 CCTTATCTCTTGAATCCTGGATATCTC 58.523 40.741 10.13 4.77 0.00 2.75
2830 4587 5.901413 ATGAATGGCTCCTTATCTCTTGA 57.099 39.130 0.00 0.00 0.00 3.02
2877 4635 8.322091 ACTACAGATTATCTTGTAAAGTGCCTT 58.678 33.333 0.00 0.00 46.34 4.35
2879 4637 9.765795 ATACTACAGATTATCTTGTAAAGTGCC 57.234 33.333 0.00 0.00 46.34 5.01
3015 4773 3.393089 AATCCATTACAGGAGCTAGCG 57.607 47.619 9.55 0.00 41.90 4.26
3110 4871 5.588240 ACATGAAAACGGAGGAAAAAGTTC 58.412 37.500 0.00 0.00 0.00 3.01
3181 5105 4.811555 TTGAAATCGCAAATAGGATCGG 57.188 40.909 0.00 0.00 0.00 4.18
3192 5116 6.150976 AGTGAATGGAAGTATTTGAAATCGCA 59.849 34.615 0.00 0.00 0.00 5.10
3228 5152 7.307989 CCTGTAAGTTTGTGATGGTTAAGTCTG 60.308 40.741 0.00 0.00 0.00 3.51
3418 5342 6.875972 ATTATAGAACTGTTCAGGGTCTGT 57.124 37.500 21.50 11.56 32.61 3.41
3477 5407 7.004691 GGACTAAAGTGGCCTATTATCCAAAT 58.995 38.462 3.32 0.00 33.57 2.32
3562 5492 4.047883 AGGATAGAAGGGGTGCTTATGTT 58.952 43.478 0.00 0.00 0.00 2.71
3786 5716 4.706476 TCAGCACCCATTTTTCCTAGATTG 59.294 41.667 0.00 0.00 0.00 2.67
3787 5717 4.706962 GTCAGCACCCATTTTTCCTAGATT 59.293 41.667 0.00 0.00 0.00 2.40
3789 5719 3.686016 GTCAGCACCCATTTTTCCTAGA 58.314 45.455 0.00 0.00 0.00 2.43
3857 5787 7.759489 TCAGTCCATGGTATTATAATTTGGC 57.241 36.000 12.58 3.97 0.00 4.52
3859 5789 9.354673 AGGTTCAGTCCATGGTATTATAATTTG 57.645 33.333 12.58 0.00 0.00 2.32
3864 5794 7.419750 GGTTCAGGTTCAGTCCATGGTATTATA 60.420 40.741 12.58 0.00 0.00 0.98
3865 5795 6.357367 GTTCAGGTTCAGTCCATGGTATTAT 58.643 40.000 12.58 0.00 0.00 1.28
3866 5796 5.338871 GGTTCAGGTTCAGTCCATGGTATTA 60.339 44.000 12.58 0.00 0.00 0.98
3885 5815 1.061546 AGTTAGAAAGGGCCGGTTCA 58.938 50.000 20.60 7.91 0.00 3.18
3887 5817 1.422402 TGAAGTTAGAAAGGGCCGGTT 59.578 47.619 1.90 0.00 0.00 4.44
3888 5818 1.003233 CTGAAGTTAGAAAGGGCCGGT 59.997 52.381 1.90 0.00 0.00 5.28
3890 5820 2.076863 CACTGAAGTTAGAAAGGGCCG 58.923 52.381 0.00 0.00 0.00 6.13
3891 5821 3.418684 TCACTGAAGTTAGAAAGGGCC 57.581 47.619 0.00 0.00 0.00 5.80
3892 5822 4.327680 ACATCACTGAAGTTAGAAAGGGC 58.672 43.478 0.00 0.00 0.00 5.19
3894 5824 6.402222 AGCTACATCACTGAAGTTAGAAAGG 58.598 40.000 0.00 0.00 0.00 3.11
3895 5825 7.816995 AGAAGCTACATCACTGAAGTTAGAAAG 59.183 37.037 0.00 0.00 0.00 2.62
3896 5826 7.671302 AGAAGCTACATCACTGAAGTTAGAAA 58.329 34.615 0.00 0.00 0.00 2.52
3897 5827 7.233389 AGAAGCTACATCACTGAAGTTAGAA 57.767 36.000 0.00 0.00 0.00 2.10
3898 5828 6.127591 GGAGAAGCTACATCACTGAAGTTAGA 60.128 42.308 0.00 0.00 0.00 2.10
3899 5829 6.039616 GGAGAAGCTACATCACTGAAGTTAG 58.960 44.000 0.00 0.00 0.00 2.34
3900 5830 5.480422 TGGAGAAGCTACATCACTGAAGTTA 59.520 40.000 0.00 0.00 0.00 2.24
4095 6045 7.748241 GCAATAATCGAATAATGAGAGGAAAGC 59.252 37.037 0.00 0.00 0.00 3.51
4350 6333 6.009589 TGTGAAGAATATCAGAAAAGCCCAA 58.990 36.000 0.00 0.00 0.00 4.12
4566 6621 1.064003 TCCCACTGCCAGCTTTAAGA 58.936 50.000 0.00 0.00 0.00 2.10
4616 6673 8.352942 CAAGAAGTACAAAATCTAGTTGGCTTT 58.647 33.333 0.00 0.00 30.67 3.51
4643 6701 4.840716 ATGCCAAATTAAGATGCCCAAA 57.159 36.364 0.00 0.00 0.00 3.28
4825 7825 6.017192 AGAAGGTACACTGAGGATTTCTGTA 58.983 40.000 0.00 0.00 36.35 2.74
4876 7876 6.238621 CGCCTGGTGCATATGAAAATAAACTA 60.239 38.462 6.97 0.00 41.33 2.24
4877 7877 5.450412 CGCCTGGTGCATATGAAAATAAACT 60.450 40.000 6.97 0.00 41.33 2.66
4885 7885 2.346766 ATTCGCCTGGTGCATATGAA 57.653 45.000 6.97 0.00 41.33 2.57
4894 7894 0.546122 TATGCCTCAATTCGCCTGGT 59.454 50.000 0.00 0.00 0.00 4.00
5037 8042 2.203480 TGGGCTGTTTGGCAGGTC 60.203 61.111 0.00 0.00 45.14 3.85
5110 8115 0.951558 ATGTCACTGGTTTCGTTGGC 59.048 50.000 0.00 0.00 0.00 4.52
5131 8136 3.288092 AGGGAAACAAGGTCACTTTGTC 58.712 45.455 5.65 0.00 33.81 3.18
5224 8235 1.723608 TTTTGTGACTGCGGGTGCTG 61.724 55.000 0.00 0.00 44.78 4.41
5295 8306 3.486875 GCAACGCACAGTGAAAACTAAGT 60.487 43.478 4.15 0.00 0.00 2.24
5342 8353 1.302511 CACCCACACTGGCACCTAC 60.303 63.158 0.00 0.00 35.79 3.18
5382 8412 3.136626 AGGAAGTTGTATGCCCAGATACC 59.863 47.826 0.00 0.00 0.00 2.73
5383 8413 4.130118 CAGGAAGTTGTATGCCCAGATAC 58.870 47.826 0.00 0.00 0.00 2.24
5384 8414 4.037222 TCAGGAAGTTGTATGCCCAGATA 58.963 43.478 0.00 0.00 0.00 1.98
5385 8415 2.846206 TCAGGAAGTTGTATGCCCAGAT 59.154 45.455 0.00 0.00 0.00 2.90
5386 8416 2.265367 TCAGGAAGTTGTATGCCCAGA 58.735 47.619 0.00 0.00 0.00 3.86
5387 8417 2.787473 TCAGGAAGTTGTATGCCCAG 57.213 50.000 0.00 0.00 0.00 4.45
5388 8418 3.245229 ACAATCAGGAAGTTGTATGCCCA 60.245 43.478 0.00 0.00 36.83 5.36
5389 8419 3.129287 CACAATCAGGAAGTTGTATGCCC 59.871 47.826 0.00 0.00 36.48 5.36
5390 8420 4.009675 TCACAATCAGGAAGTTGTATGCC 58.990 43.478 0.00 0.00 36.48 4.40
5391 8421 5.355071 TCATCACAATCAGGAAGTTGTATGC 59.645 40.000 0.00 0.00 36.48 3.14
5392 8422 6.820152 TCTCATCACAATCAGGAAGTTGTATG 59.180 38.462 0.00 0.00 36.48 2.39
5393 8423 6.950842 TCTCATCACAATCAGGAAGTTGTAT 58.049 36.000 0.00 0.00 36.48 2.29
5394 8424 6.014242 ACTCTCATCACAATCAGGAAGTTGTA 60.014 38.462 0.00 0.00 36.48 2.41
5395 8425 5.221803 ACTCTCATCACAATCAGGAAGTTGT 60.222 40.000 0.00 0.00 39.00 3.32
5396 8426 5.243981 ACTCTCATCACAATCAGGAAGTTG 58.756 41.667 0.00 0.00 0.00 3.16
5397 8427 5.495926 ACTCTCATCACAATCAGGAAGTT 57.504 39.130 0.00 0.00 0.00 2.66
5398 8428 5.495926 AACTCTCATCACAATCAGGAAGT 57.504 39.130 0.00 0.00 0.00 3.01
5399 8429 7.012138 CCAATAACTCTCATCACAATCAGGAAG 59.988 40.741 0.00 0.00 0.00 3.46
5400 8430 6.825213 CCAATAACTCTCATCACAATCAGGAA 59.175 38.462 0.00 0.00 0.00 3.36
5448 8478 5.673337 ACAATGTACTAGCAGTTGTTGTG 57.327 39.130 0.00 0.00 30.37 3.33
5480 8524 4.628333 CACGGTGTAATCGTCCTTGTAAAT 59.372 41.667 0.00 0.00 38.94 1.40
5501 8545 6.999950 ACTACCCCATTTCCAAAATTAACAC 58.000 36.000 0.00 0.00 0.00 3.32
5536 8580 5.533903 GCATCATCTTCATCCACAACCTTAT 59.466 40.000 0.00 0.00 0.00 1.73
5596 8652 2.490991 GCTGGGGTATGGTAATTCGAC 58.509 52.381 0.00 0.00 0.00 4.20
5675 8731 2.296471 GGTCGGTGGTACTCCATATGAG 59.704 54.545 3.65 2.59 46.20 2.90
5676 8732 2.091499 AGGTCGGTGGTACTCCATATGA 60.091 50.000 3.65 0.00 46.20 2.15
5681 8737 0.033796 CCTAGGTCGGTGGTACTCCA 60.034 60.000 0.00 0.00 43.09 3.86
5683 8739 1.211457 TCTCCTAGGTCGGTGGTACTC 59.789 57.143 9.08 0.00 0.00 2.59
5703 8759 1.899814 TCCTTGAACTGGAGCGTACAT 59.100 47.619 0.00 0.00 0.00 2.29
5705 8761 2.674796 ATCCTTGAACTGGAGCGTAC 57.325 50.000 0.00 0.00 36.99 3.67
5737 8793 0.179119 CCACTTTCCTACGTAGCCCG 60.179 60.000 17.41 4.05 44.03 6.13
5740 8796 0.248289 TGGCCACTTTCCTACGTAGC 59.752 55.000 17.41 3.86 0.00 3.58
5741 8797 2.093658 ACATGGCCACTTTCCTACGTAG 60.094 50.000 8.16 15.92 0.00 3.51
5756 8812 1.594862 GATGCGAGTAGAACACATGGC 59.405 52.381 0.00 0.00 0.00 4.40
5760 8816 1.893137 ACTGGATGCGAGTAGAACACA 59.107 47.619 0.00 0.00 0.00 3.72
5762 8818 2.164422 CAGACTGGATGCGAGTAGAACA 59.836 50.000 0.00 0.00 0.00 3.18
5777 8833 2.166907 ATGGGTAGGAGTCCAGACTG 57.833 55.000 12.86 0.00 42.66 3.51
5778 8834 4.031611 GTTTATGGGTAGGAGTCCAGACT 58.968 47.826 12.86 0.00 45.84 3.24
5788 8844 3.139077 GCCTTCATCGTTTATGGGTAGG 58.861 50.000 0.00 0.00 36.15 3.18
5798 8854 3.346315 TCATGTCAATGCCTTCATCGTT 58.654 40.909 0.00 0.00 33.47 3.85
5809 8865 3.589951 ATCTCCCCCTTCATGTCAATG 57.410 47.619 0.00 0.00 34.88 2.82
5811 8867 3.202151 GGTAATCTCCCCCTTCATGTCAA 59.798 47.826 0.00 0.00 0.00 3.18
5824 8880 2.297597 CTCCTCGATGGTGGTAATCTCC 59.702 54.545 0.00 0.00 37.07 3.71
5834 8890 4.282496 CCCTTATATAGCTCCTCGATGGT 58.718 47.826 0.00 0.00 37.07 3.55
5840 8896 2.427812 GGACGCCCTTATATAGCTCCTC 59.572 54.545 0.00 0.00 0.00 3.71
5841 8897 2.225293 TGGACGCCCTTATATAGCTCCT 60.225 50.000 0.00 0.00 0.00 3.69
5843 8899 3.447586 TCATGGACGCCCTTATATAGCTC 59.552 47.826 0.00 0.00 0.00 4.09
5848 8904 2.505819 GGGATCATGGACGCCCTTATAT 59.494 50.000 0.00 0.00 37.59 0.86
5895 8951 6.377996 CACCATGATCATTAGGGTTTCAAGAA 59.622 38.462 12.37 0.00 0.00 2.52
5934 8990 2.044053 ATGGGCAATGGTGGTCGG 60.044 61.111 0.00 0.00 0.00 4.79
6054 9110 2.676471 GGTCCGCTTGCATGGGTT 60.676 61.111 14.36 0.00 0.00 4.11
6060 9116 2.909965 GGTTTGGGTCCGCTTGCA 60.910 61.111 0.00 0.00 0.00 4.08
6069 9125 5.930209 ACATGATATATCCAGGTTTGGGT 57.070 39.130 10.25 0.00 45.10 4.51
6120 9177 2.552599 TTTATGCAGTCACGGGAACA 57.447 45.000 0.00 0.00 0.00 3.18
6197 9256 8.920665 TGTTTGGACAATTTAATTCATTTAGCG 58.079 29.630 0.00 0.00 31.49 4.26
6235 9295 3.189287 CAGGAAGCTACACAAATGTCACC 59.811 47.826 0.00 0.00 40.48 4.02
6574 9659 5.170021 GCAGCCATTGATATTTCACAACAA 58.830 37.500 0.00 0.00 0.00 2.83
6575 9660 4.381825 GGCAGCCATTGATATTTCACAACA 60.382 41.667 6.55 0.00 0.00 3.33
6576 9661 4.114794 GGCAGCCATTGATATTTCACAAC 58.885 43.478 6.55 0.00 0.00 3.32
6577 9662 3.132646 GGGCAGCCATTGATATTTCACAA 59.867 43.478 15.19 0.00 0.00 3.33
6578 9663 2.694628 GGGCAGCCATTGATATTTCACA 59.305 45.455 15.19 0.00 0.00 3.58
6579 9664 2.287788 CGGGCAGCCATTGATATTTCAC 60.288 50.000 15.19 0.00 0.00 3.18
6580 9665 1.955778 CGGGCAGCCATTGATATTTCA 59.044 47.619 15.19 0.00 0.00 2.69
6581 9666 2.030805 GTCGGGCAGCCATTGATATTTC 60.031 50.000 15.19 0.00 0.00 2.17
6582 9667 1.956477 GTCGGGCAGCCATTGATATTT 59.044 47.619 15.19 0.00 0.00 1.40
6583 9668 1.133823 TGTCGGGCAGCCATTGATATT 60.134 47.619 15.19 0.00 0.00 1.28
6584 9669 0.473755 TGTCGGGCAGCCATTGATAT 59.526 50.000 15.19 0.00 0.00 1.63
6585 9670 0.463654 GTGTCGGGCAGCCATTGATA 60.464 55.000 15.19 3.24 0.00 2.15
6598 9683 2.978010 GCAGGGTTGTGGTGTCGG 60.978 66.667 0.00 0.00 0.00 4.79
6664 9761 3.990318 AAAAGCTCCAGGAAAGAAACG 57.010 42.857 0.00 0.00 0.00 3.60
6691 9788 4.466567 TGAGCAACTGAATAAACACACG 57.533 40.909 0.00 0.00 0.00 4.49
6705 9802 2.763448 AGGGAGACAGTAGATGAGCAAC 59.237 50.000 0.00 0.00 0.00 4.17
6758 9855 3.118298 AGTTCTGCTGGCCAAAATTGTTT 60.118 39.130 7.01 0.00 0.00 2.83
6815 9912 6.221659 AGTTAGTTTCTAAGTTTGTCGAGGG 58.778 40.000 0.00 0.00 0.00 4.30
6827 9924 6.269077 TCATGTGGACCAGAGTTAGTTTCTAA 59.731 38.462 0.00 0.00 0.00 2.10
6852 9966 6.013466 ACCAGTTTGATTTATGAAAGCCCAAT 60.013 34.615 0.00 0.00 0.00 3.16
6858 9972 5.393027 CCCCGACCAGTTTGATTTATGAAAG 60.393 44.000 0.00 0.00 0.00 2.62
6930 10051 7.147976 CCGATTTCTGAAACTTGATTCCTTTT 58.852 34.615 4.73 0.00 0.00 2.27
7014 10135 4.813027 CAACATGCTGGCTAAAACTTGAT 58.187 39.130 0.00 0.00 0.00 2.57
7087 10208 2.948979 ACAAAGGTGTGAAATCAGCGAA 59.051 40.909 0.00 0.00 40.23 4.70
7146 10271 5.345741 ACATCAACGAACATAAAAAGCATGC 59.654 36.000 10.51 10.51 0.00 4.06
7152 10277 8.225107 GTGCTACTACATCAACGAACATAAAAA 58.775 33.333 0.00 0.00 0.00 1.94
7176 10301 4.817517 ACGGACAAGGATAAACTGTAGTG 58.182 43.478 0.00 0.00 0.00 2.74
7209 10334 4.675565 CAGCGGTATCTTATGTTACACTCG 59.324 45.833 0.00 0.00 0.00 4.18
7228 10353 0.532115 AAAGGCAAAATAGGGCAGCG 59.468 50.000 0.00 0.00 0.00 5.18
7252 10377 1.134699 CACGATAAGAGCTGGGCAAGA 60.135 52.381 0.00 0.00 0.00 3.02
7275 10400 4.081406 TGCATTGAGTAACCATTCTGCTT 58.919 39.130 0.00 0.00 0.00 3.91
7276 10401 3.689347 TGCATTGAGTAACCATTCTGCT 58.311 40.909 0.00 0.00 0.00 4.24
7319 10447 3.765381 TCAAGGGTGAATGAAATGCTCA 58.235 40.909 0.00 0.00 38.81 4.26
7348 10476 1.547372 GCACACAGGATGGCAATTCTT 59.453 47.619 0.00 0.00 43.62 2.52
7360 10488 4.747108 GCATGATACTTACTAGCACACAGG 59.253 45.833 0.00 0.00 0.00 4.00
7361 10489 4.442403 CGCATGATACTTACTAGCACACAG 59.558 45.833 0.00 0.00 0.00 3.66
7362 10490 4.097286 TCGCATGATACTTACTAGCACACA 59.903 41.667 0.00 0.00 0.00 3.72
7363 10491 4.441415 GTCGCATGATACTTACTAGCACAC 59.559 45.833 0.00 0.00 0.00 3.82
7365 10493 4.607955 TGTCGCATGATACTTACTAGCAC 58.392 43.478 0.00 0.00 0.00 4.40
7366 10494 4.911514 TGTCGCATGATACTTACTAGCA 57.088 40.909 0.00 0.00 0.00 3.49
7367 10495 5.520632 TCTTGTCGCATGATACTTACTAGC 58.479 41.667 0.00 0.00 0.00 3.42
7368 10496 8.581057 AATTCTTGTCGCATGATACTTACTAG 57.419 34.615 0.00 0.00 0.00 2.57
7370 10498 8.982685 CATAATTCTTGTCGCATGATACTTACT 58.017 33.333 0.00 0.00 0.00 2.24
7371 10499 8.223769 CCATAATTCTTGTCGCATGATACTTAC 58.776 37.037 0.00 0.00 0.00 2.34
7372 10500 8.147704 TCCATAATTCTTGTCGCATGATACTTA 58.852 33.333 0.00 0.00 0.00 2.24
7373 10501 6.992123 TCCATAATTCTTGTCGCATGATACTT 59.008 34.615 0.00 0.00 0.00 2.24
7424 10552 9.893305 GTTTAAGTTGTCAAGCAATTACAGTAT 57.107 29.630 0.00 0.00 39.55 2.12
7426 10554 7.767261 TGTTTAAGTTGTCAAGCAATTACAGT 58.233 30.769 0.00 0.00 39.55 3.55
7428 10556 8.409371 TGATGTTTAAGTTGTCAAGCAATTACA 58.591 29.630 0.00 0.00 39.55 2.41
7429 10557 8.795786 TGATGTTTAAGTTGTCAAGCAATTAC 57.204 30.769 0.00 0.00 39.55 1.89
7430 10558 9.979578 ATTGATGTTTAAGTTGTCAAGCAATTA 57.020 25.926 0.00 0.00 39.55 1.40
7431 10559 8.891671 ATTGATGTTTAAGTTGTCAAGCAATT 57.108 26.923 0.00 0.00 39.55 2.32
7465 10631 1.961133 TCCAACTAAGGGGAATCGGT 58.039 50.000 0.00 0.00 0.00 4.69
7467 10633 3.560636 ACATCCAACTAAGGGGAATCG 57.439 47.619 0.00 0.00 36.62 3.34
7489 10655 3.057526 GGCCATCCTAACAAACACAGTTC 60.058 47.826 0.00 0.00 0.00 3.01
7490 10656 2.890945 GGCCATCCTAACAAACACAGTT 59.109 45.455 0.00 0.00 0.00 3.16
7492 10658 1.468520 CGGCCATCCTAACAAACACAG 59.531 52.381 2.24 0.00 0.00 3.66
7493 10659 1.529226 CGGCCATCCTAACAAACACA 58.471 50.000 2.24 0.00 0.00 3.72
7494 10660 0.170339 GCGGCCATCCTAACAAACAC 59.830 55.000 2.24 0.00 0.00 3.32
7507 10678 2.746904 CGATAATATTTGGATGCGGCCA 59.253 45.455 2.24 0.00 35.78 5.36
7509 10680 3.188460 ACACGATAATATTTGGATGCGGC 59.812 43.478 0.00 0.00 0.00 6.53
7510 10681 4.450757 TGACACGATAATATTTGGATGCGG 59.549 41.667 0.00 0.00 0.00 5.69
7511 10682 5.590104 TGACACGATAATATTTGGATGCG 57.410 39.130 0.00 0.00 0.00 4.73
7552 10725 9.994432 CTGGTTGATCAGATCATTTAGTAAAAC 57.006 33.333 14.11 5.83 39.39 2.43
7558 10731 5.688807 ACCCTGGTTGATCAGATCATTTAG 58.311 41.667 14.11 11.40 39.39 1.85
7566 10739 3.706594 GTCTGATACCCTGGTTGATCAGA 59.293 47.826 20.45 20.45 42.83 3.27
7572 10745 3.515502 TCTTCAGTCTGATACCCTGGTTG 59.484 47.826 2.68 0.00 0.00 3.77
7580 10753 9.424319 TGTATTTCAGTTTCTTCAGTCTGATAC 57.576 33.333 2.68 0.00 36.91 2.24
7600 10773 7.226720 AGAGATGTTTGTTTCTCGTGTGTATTT 59.773 33.333 0.00 0.00 42.57 1.40
7612 10785 7.335422 ACCACTCATATGAGAGATGTTTGTTTC 59.665 37.037 34.16 0.00 44.74 2.78
7614 10787 6.596888 CACCACTCATATGAGAGATGTTTGTT 59.403 38.462 34.16 10.07 44.74 2.83
7627 10800 4.383173 TGCAAGATAGCACCACTCATATG 58.617 43.478 0.00 0.00 40.11 1.78
7631 10804 2.038952 ACTTGCAAGATAGCACCACTCA 59.961 45.455 32.50 0.00 45.61 3.41
7697 10870 2.505557 GGTCCTTACACGACCGCG 60.506 66.667 0.00 0.00 40.46 6.46
7703 10876 2.346803 CTCACCAATGGTCCTTACACG 58.653 52.381 0.00 0.00 31.02 4.49
7732 10905 3.565214 TCCTCCCAAGTTGCCGCA 61.565 61.111 0.00 0.00 0.00 5.69
7734 10907 1.672356 CAGTCCTCCCAAGTTGCCG 60.672 63.158 0.00 0.00 0.00 5.69
7793 10966 0.394565 AGTTGAGAAGCGGCTTGTCT 59.605 50.000 31.61 20.00 35.24 3.41
7801 10974 0.449388 GCCATCCAAGTTGAGAAGCG 59.551 55.000 3.87 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.