Multiple sequence alignment - TraesCS1B01G243600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G243600 chr1B 100.000 2348 0 0 1 2348 432561355 432559008 0.000000e+00 4337.0
1 TraesCS1B01G243600 chr1D 86.602 1642 130 39 1 1570 319643589 319641966 0.000000e+00 1731.0
2 TraesCS1B01G243600 chr1D 85.583 326 30 10 1553 1876 319630303 319629993 2.250000e-85 326.0
3 TraesCS1B01G243600 chr1D 79.412 102 16 4 21 121 86106810 86106713 1.510000e-07 67.6
4 TraesCS1B01G243600 chr1A 87.207 1321 111 29 580 1852 403610662 403611972 0.000000e+00 1450.0
5 TraesCS1B01G243600 chr1A 88.406 138 14 2 1871 2006 403616820 403616957 5.190000e-37 165.0
6 TraesCS1B01G243600 chrUn 85.143 350 41 10 2006 2348 22879993 22879648 4.800000e-92 348.0
7 TraesCS1B01G243600 chrUn 84.483 348 42 10 2006 2348 22716717 22717057 1.340000e-87 333.0
8 TraesCS1B01G243600 chr3D 84.058 276 39 4 1629 1903 560157699 560157428 6.440000e-66 261.0
9 TraesCS1B01G243600 chr6D 86.000 200 16 8 2006 2195 50671378 50671575 1.100000e-48 204.0
10 TraesCS1B01G243600 chr5A 90.323 124 9 3 1624 1745 602964558 602964680 2.420000e-35 159.0
11 TraesCS1B01G243600 chr5D 81.982 111 16 4 1 108 413070735 413070626 8.940000e-15 91.6
12 TraesCS1B01G243600 chr4A 91.045 67 6 0 1 67 604113990 604114056 8.940000e-15 91.6
13 TraesCS1B01G243600 chr6B 80.000 135 16 10 1 129 107179445 107179574 3.210000e-14 89.8
14 TraesCS1B01G243600 chr6B 82.692 104 12 6 15 115 113134523 113134623 1.160000e-13 87.9
15 TraesCS1B01G243600 chr3B 87.500 72 8 1 1 71 568561514 568561443 5.380000e-12 82.4
16 TraesCS1B01G243600 chr3A 80.909 110 15 6 3 108 513537104 513536997 5.380000e-12 82.4
17 TraesCS1B01G243600 chr7B 78.862 123 23 3 1 121 315056764 315056885 1.930000e-11 80.5
18 TraesCS1B01G243600 chr2A 79.808 104 15 6 21 121 644390188 644390288 1.160000e-08 71.3
19 TraesCS1B01G243600 chr2A 94.286 35 2 0 516 550 89933923 89933889 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G243600 chr1B 432559008 432561355 2347 True 4337 4337 100.000 1 2348 1 chr1B.!!$R1 2347
1 TraesCS1B01G243600 chr1D 319641966 319643589 1623 True 1731 1731 86.602 1 1570 1 chr1D.!!$R3 1569
2 TraesCS1B01G243600 chr1A 403610662 403611972 1310 False 1450 1450 87.207 580 1852 1 chr1A.!!$F1 1272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
698 732 0.603065 TGATGCAGCACTCGTACACT 59.397 50.0 0.0 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 2148 0.0293 CGGTGTTTGTGTCTTGGCTG 59.971 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 90 9.797556 AAAAAGTTCGCTGAGTTTAATAAAAGT 57.202 25.926 0.00 0.00 0.00 2.66
92 94 8.617809 AGTTCGCTGAGTTTAATAAAAGTTCAA 58.382 29.630 0.00 0.00 0.00 2.69
115 117 8.522830 TCAACAAGTTTCAAGAAAAGTTCATCT 58.477 29.630 0.00 0.00 38.23 2.90
175 179 3.971032 AGTTTGAGAAAAGTTCAGCGG 57.029 42.857 0.00 0.00 0.00 5.52
291 315 8.757164 AGTTCGTCAATTTTGAGAAAAAGTTT 57.243 26.923 0.00 0.00 37.98 2.66
419 449 0.605319 TCACGTGAGAATTGGTGGCC 60.605 55.000 15.76 0.00 0.00 5.36
426 456 1.379843 GAATTGGTGGCCGGATGGT 60.380 57.895 5.05 0.00 37.67 3.55
444 474 5.220931 GGATGGTTAGTGCTTGCTAATTCAG 60.221 44.000 0.00 0.00 34.03 3.02
447 477 5.178797 GGTTAGTGCTTGCTAATTCAGAGA 58.821 41.667 0.00 0.00 34.03 3.10
452 482 4.332268 GTGCTTGCTAATTCAGAGAAGGAG 59.668 45.833 0.00 0.00 0.00 3.69
455 485 4.744795 TGCTAATTCAGAGAAGGAGGTC 57.255 45.455 0.00 0.00 0.00 3.85
456 486 4.096681 TGCTAATTCAGAGAAGGAGGTCA 58.903 43.478 0.00 0.00 0.00 4.02
472 502 1.227823 TCACGGGTTTGAGTGGCAG 60.228 57.895 0.00 0.00 38.77 4.85
573 607 5.141568 GCTCGTTGCGAAAACACTTATAAA 58.858 37.500 0.00 0.00 34.74 1.40
696 730 1.643880 CATGATGCAGCACTCGTACA 58.356 50.000 6.89 0.00 0.00 2.90
698 732 0.603065 TGATGCAGCACTCGTACACT 59.397 50.000 0.00 0.00 0.00 3.55
730 766 7.646548 TGATATAGTTAAGTCACAGCTCACT 57.353 36.000 0.00 0.00 0.00 3.41
747 783 6.017605 CAGCTCACTAGGCTAACCATAATTTG 60.018 42.308 0.00 0.00 38.03 2.32
748 784 5.278022 GCTCACTAGGCTAACCATAATTTGC 60.278 44.000 0.00 0.00 39.06 3.68
753 789 2.287608 GGCTAACCATAATTTGCTCCGC 60.288 50.000 0.00 0.00 35.26 5.54
769 805 3.649073 CTCCGCACATAATGAACGGATA 58.351 45.455 13.82 0.00 43.30 2.59
774 810 5.374080 CGCACATAATGAACGGATATCAAC 58.626 41.667 4.83 0.00 0.00 3.18
906 942 5.690464 AATAACCTGGCAATGGCATTTTA 57.310 34.783 10.64 10.86 43.71 1.52
911 947 4.263418 ACCTGGCAATGGCATTTTATGTTT 60.263 37.500 10.64 0.00 43.71 2.83
924 960 3.328382 TTATGTTTCTCTGTCCCACCG 57.672 47.619 0.00 0.00 0.00 4.94
951 992 2.814336 CGAAAACCAGAAGAAAGGGAGG 59.186 50.000 0.00 0.00 0.00 4.30
965 1008 2.548295 GGAGGGCAAACAACGCGAA 61.548 57.895 15.93 0.00 0.00 4.70
966 1009 1.357334 GAGGGCAAACAACGCGAAA 59.643 52.632 15.93 0.00 0.00 3.46
968 1011 1.660264 GGGCAAACAACGCGAAAGG 60.660 57.895 15.93 0.65 0.00 3.11
993 1047 2.412112 CTCCGTTCGTCCGATCCC 59.588 66.667 0.00 0.00 0.00 3.85
1005 1059 1.667722 CGATCCCGATCAGATGGCA 59.332 57.895 5.59 0.00 37.69 4.92
1013 1067 0.392998 GATCAGATGGCACGGGTTGT 60.393 55.000 0.00 0.00 0.00 3.32
1047 1101 2.357517 CTCGTGGCGCAAAGGTCT 60.358 61.111 10.83 0.00 0.00 3.85
1053 1107 2.282180 GCGCAAAGGTCTTCCCCA 60.282 61.111 0.30 0.00 0.00 4.96
1059 1113 2.224042 GCAAAGGTCTTCCCCAAAACTG 60.224 50.000 0.00 0.00 0.00 3.16
1072 1126 3.490078 CCCAAAACTGTGCAAACGTACAT 60.490 43.478 0.00 0.00 0.00 2.29
1095 1149 4.010349 GTCCTTTCATTTCGATCCAACCT 58.990 43.478 0.00 0.00 0.00 3.50
1155 1231 0.533032 TAACCGCCATCGATGTGTCA 59.467 50.000 23.27 1.93 38.10 3.58
1186 1262 1.878656 CGAGGAGAAGGCGGTGAAGT 61.879 60.000 0.00 0.00 0.00 3.01
1203 1279 3.707458 TTGGGTATGGCGGCGACA 61.707 61.111 21.84 21.84 0.00 4.35
1216 1292 2.962827 GCGACAGAGGACACGACGA 61.963 63.158 0.00 0.00 0.00 4.20
1378 1454 3.262448 AAACACGCTACCGGCCCAT 62.262 57.895 0.00 0.00 39.22 4.00
1379 1455 1.901654 AAACACGCTACCGGCCCATA 61.902 55.000 0.00 0.00 39.22 2.74
1439 1515 7.150640 GGCGTGCTAAACTATATTTACTAGGT 58.849 38.462 0.00 0.00 0.00 3.08
1495 1575 7.321153 TGCTTCCTGTAAGTATGTAAGTCTTC 58.679 38.462 0.00 0.00 37.53 2.87
1497 1577 7.817962 GCTTCCTGTAAGTATGTAAGTCTTCAA 59.182 37.037 0.00 0.00 37.53 2.69
1500 1580 8.304596 TCCTGTAAGTATGTAAGTCTTCAACAG 58.695 37.037 0.00 0.00 32.32 3.16
1545 1625 3.970828 CGCAAATCGTCCAAAATTTCC 57.029 42.857 0.00 0.00 0.00 3.13
1551 1631 2.235016 TCGTCCAAAATTTCCCAGTGG 58.765 47.619 0.63 0.63 0.00 4.00
1552 1632 1.960689 CGTCCAAAATTTCCCAGTGGT 59.039 47.619 8.74 0.00 0.00 4.16
1555 1635 4.377021 GTCCAAAATTTCCCAGTGGTTTC 58.623 43.478 8.74 0.00 0.00 2.78
1558 1638 1.698506 AATTTCCCAGTGGTTTCGCA 58.301 45.000 8.74 0.00 0.00 5.10
1570 1650 0.306533 GTTTCGCACACCACGACAAT 59.693 50.000 0.00 0.00 39.67 2.71
1583 1663 4.518970 ACCACGACAATATTTCAGCAGTTT 59.481 37.500 0.00 0.00 0.00 2.66
1584 1664 4.853196 CCACGACAATATTTCAGCAGTTTG 59.147 41.667 0.00 0.00 0.00 2.93
1588 1668 7.962373 CACGACAATATTTCAGCAGTTTGATTA 59.038 33.333 0.00 0.00 0.00 1.75
1618 1698 3.077359 GCCATTGTAGCAACTTCTGAGT 58.923 45.455 0.00 0.00 37.87 3.41
1623 1703 2.365293 TGTAGCAACTTCTGAGTGCTCA 59.635 45.455 13.62 1.69 39.39 4.26
1633 1714 0.909133 TGAGTGCTCAGCATGGGGTA 60.909 55.000 0.54 0.00 41.91 3.69
1635 1716 1.452108 GTGCTCAGCATGGGGTACC 60.452 63.158 0.54 2.17 46.03 3.34
1638 1719 1.903955 TGCTCAGCATGGGGTACCTTA 60.904 52.381 12.72 1.08 41.20 2.69
1652 1733 4.946445 GGTACCTTACATCTAACAGCCTC 58.054 47.826 4.06 0.00 0.00 4.70
1657 1738 5.363005 ACCTTACATCTAACAGCCTCGTAAT 59.637 40.000 0.00 0.00 0.00 1.89
1689 1771 9.153721 TCAATCAAATTCATTTGCTATGGAAAC 57.846 29.630 7.31 0.00 45.06 2.78
1693 1775 8.156165 TCAAATTCATTTGCTATGGAAACCTTT 58.844 29.630 7.31 0.00 45.06 3.11
1725 1807 2.040939 GAGGCCCCTACTCTCTTTACC 58.959 57.143 0.00 0.00 32.28 2.85
1726 1808 1.365028 AGGCCCCTACTCTCTTTACCA 59.635 52.381 0.00 0.00 0.00 3.25
1729 1811 2.399580 CCCCTACTCTCTTTACCAGGG 58.600 57.143 0.00 0.00 42.09 4.45
1746 1831 2.751806 CAGGGAGAAGATGCAAGTTTCC 59.248 50.000 0.00 0.00 0.00 3.13
1748 1833 3.157087 GGGAGAAGATGCAAGTTTCCAA 58.843 45.455 0.00 0.00 0.00 3.53
1750 1835 3.569701 GGAGAAGATGCAAGTTTCCAACA 59.430 43.478 0.00 0.00 0.00 3.33
1751 1836 4.037923 GGAGAAGATGCAAGTTTCCAACAA 59.962 41.667 0.00 0.00 0.00 2.83
1753 1838 4.646492 AGAAGATGCAAGTTTCCAACAACT 59.354 37.500 0.00 0.00 38.74 3.16
1771 1856 4.578928 ACAACTATTTTGAACGAACAGCCT 59.421 37.500 0.00 0.00 0.00 4.58
1773 1858 5.358298 ACTATTTTGAACGAACAGCCTTC 57.642 39.130 0.00 0.00 0.00 3.46
1784 1869 0.976641 ACAGCCTTCGACATCTCCAA 59.023 50.000 0.00 0.00 0.00 3.53
1786 1871 1.066573 CAGCCTTCGACATCTCCAAGT 60.067 52.381 0.00 0.00 0.00 3.16
1793 1878 4.801330 TCGACATCTCCAAGTTGTATGT 57.199 40.909 12.83 12.83 33.63 2.29
1799 1884 7.004555 ACATCTCCAAGTTGTATGTTGTCTA 57.995 36.000 1.45 0.00 0.00 2.59
1809 1894 7.500992 AGTTGTATGTTGTCTATGATCCGATT 58.499 34.615 0.00 0.00 0.00 3.34
1821 1906 0.535780 ATCCGATTCGCACATGCCAT 60.536 50.000 0.00 0.00 37.91 4.40
1845 1930 3.932822 ACACACTCAATACGGCAATACA 58.067 40.909 0.00 0.00 0.00 2.29
1852 1937 0.180171 ATACGGCAATACAGGCAGCA 59.820 50.000 0.00 0.00 0.00 4.41
1853 1938 0.742990 TACGGCAATACAGGCAGCAC 60.743 55.000 0.00 0.00 0.00 4.40
1854 1939 2.039974 CGGCAATACAGGCAGCACA 61.040 57.895 0.00 0.00 0.00 4.57
1855 1940 1.508088 GGCAATACAGGCAGCACAC 59.492 57.895 0.00 0.00 0.00 3.82
1856 1941 1.135315 GCAATACAGGCAGCACACG 59.865 57.895 0.00 0.00 0.00 4.49
1857 1942 1.796151 CAATACAGGCAGCACACGG 59.204 57.895 0.00 0.00 0.00 4.94
1858 1943 0.673333 CAATACAGGCAGCACACGGA 60.673 55.000 0.00 0.00 0.00 4.69
1859 1944 0.673644 AATACAGGCAGCACACGGAC 60.674 55.000 0.00 0.00 0.00 4.79
1860 1945 1.826340 ATACAGGCAGCACACGGACA 61.826 55.000 0.00 0.00 0.00 4.02
1861 1946 2.709125 TACAGGCAGCACACGGACAC 62.709 60.000 0.00 0.00 0.00 3.67
1862 1947 3.550431 AGGCAGCACACGGACACT 61.550 61.111 0.00 0.00 0.00 3.55
1863 1948 2.207229 AGGCAGCACACGGACACTA 61.207 57.895 0.00 0.00 0.00 2.74
1864 1949 1.738099 GGCAGCACACGGACACTAG 60.738 63.158 0.00 0.00 0.00 2.57
1865 1950 1.006102 GCAGCACACGGACACTAGT 60.006 57.895 0.00 0.00 0.00 2.57
1866 1951 1.284982 GCAGCACACGGACACTAGTG 61.285 60.000 21.44 21.44 43.46 2.74
1867 1952 0.667487 CAGCACACGGACACTAGTGG 60.667 60.000 26.12 11.53 42.25 4.00
1868 1953 2.027625 GCACACGGACACTAGTGGC 61.028 63.158 26.12 23.88 42.25 5.01
1869 1954 1.365999 CACACGGACACTAGTGGCA 59.634 57.895 29.53 0.00 41.42 4.92
1870 1955 0.249699 CACACGGACACTAGTGGCAA 60.250 55.000 29.53 0.00 41.42 4.52
1871 1956 0.249741 ACACGGACACTAGTGGCAAC 60.250 55.000 29.53 12.72 41.42 4.17
1872 1957 0.033504 CACGGACACTAGTGGCAACT 59.966 55.000 29.53 8.58 41.42 3.16
1873 1958 0.317479 ACGGACACTAGTGGCAACTC 59.683 55.000 29.53 15.42 41.42 3.01
1874 1959 0.317160 CGGACACTAGTGGCAACTCA 59.683 55.000 29.53 0.00 41.42 3.41
1875 1960 1.797025 GGACACTAGTGGCAACTCAC 58.203 55.000 29.53 7.85 41.42 3.51
1877 1962 2.224305 GGACACTAGTGGCAACTCACTT 60.224 50.000 29.53 2.91 44.74 3.16
1878 1963 2.802816 GACACTAGTGGCAACTCACTTG 59.197 50.000 24.30 0.00 44.74 3.16
1880 1965 2.838736 ACTAGTGGCAACTCACTTGTG 58.161 47.619 0.00 0.00 46.27 3.33
1881 1966 2.170607 ACTAGTGGCAACTCACTTGTGT 59.829 45.455 0.00 0.00 46.27 3.72
1882 1967 1.668419 AGTGGCAACTCACTTGTGTC 58.332 50.000 0.00 0.00 44.74 3.67
1883 1968 1.210478 AGTGGCAACTCACTTGTGTCT 59.790 47.619 0.00 0.00 44.74 3.41
1884 1969 1.599542 GTGGCAACTCACTTGTGTCTC 59.400 52.381 0.00 0.00 34.98 3.36
1885 1970 0.861837 GGCAACTCACTTGTGTCTCG 59.138 55.000 0.46 0.00 31.73 4.04
1886 1971 1.538204 GGCAACTCACTTGTGTCTCGA 60.538 52.381 0.46 0.00 31.73 4.04
1887 1972 1.523095 GCAACTCACTTGTGTCTCGAC 59.477 52.381 0.46 0.00 31.73 4.20
1888 1973 2.799917 GCAACTCACTTGTGTCTCGACT 60.800 50.000 0.46 0.00 31.73 4.18
1889 1974 3.448686 CAACTCACTTGTGTCTCGACTT 58.551 45.455 0.46 0.00 0.00 3.01
1890 1975 3.802948 ACTCACTTGTGTCTCGACTTT 57.197 42.857 0.46 0.00 0.00 2.66
1891 1976 3.448686 ACTCACTTGTGTCTCGACTTTG 58.551 45.455 0.46 0.00 0.00 2.77
1892 1977 2.201732 TCACTTGTGTCTCGACTTTGC 58.798 47.619 0.46 0.00 0.00 3.68
1893 1978 1.933181 CACTTGTGTCTCGACTTTGCA 59.067 47.619 0.00 0.00 0.00 4.08
1894 1979 2.351418 CACTTGTGTCTCGACTTTGCAA 59.649 45.455 0.00 0.00 0.00 4.08
1895 1980 2.351726 ACTTGTGTCTCGACTTTGCAAC 59.648 45.455 0.00 0.00 0.00 4.17
1896 1981 1.295792 TGTGTCTCGACTTTGCAACC 58.704 50.000 0.00 0.00 0.00 3.77
1897 1982 0.586802 GTGTCTCGACTTTGCAACCC 59.413 55.000 0.00 0.00 0.00 4.11
1898 1983 0.179234 TGTCTCGACTTTGCAACCCA 59.821 50.000 0.00 0.00 0.00 4.51
1899 1984 0.586802 GTCTCGACTTTGCAACCCAC 59.413 55.000 0.00 0.00 0.00 4.61
1900 1985 0.468226 TCTCGACTTTGCAACCCACT 59.532 50.000 0.00 0.00 0.00 4.00
1901 1986 0.588252 CTCGACTTTGCAACCCACTG 59.412 55.000 0.00 0.00 0.00 3.66
1902 1987 0.107410 TCGACTTTGCAACCCACTGT 60.107 50.000 0.00 0.00 0.00 3.55
1903 1988 0.307760 CGACTTTGCAACCCACTGTC 59.692 55.000 0.00 0.61 0.00 3.51
1904 1989 1.388547 GACTTTGCAACCCACTGTCA 58.611 50.000 0.00 0.00 0.00 3.58
1905 1990 1.956477 GACTTTGCAACCCACTGTCAT 59.044 47.619 0.00 0.00 0.00 3.06
1906 1991 1.682854 ACTTTGCAACCCACTGTCATG 59.317 47.619 0.00 0.00 0.00 3.07
1907 1992 1.955778 CTTTGCAACCCACTGTCATGA 59.044 47.619 0.00 0.00 0.00 3.07
1908 1993 1.317613 TTGCAACCCACTGTCATGAC 58.682 50.000 19.27 19.27 0.00 3.06
1909 1994 0.537143 TGCAACCCACTGTCATGACC 60.537 55.000 22.85 5.91 0.00 4.02
1910 1995 1.577328 GCAACCCACTGTCATGACCG 61.577 60.000 22.85 18.78 0.00 4.79
1911 1996 0.250295 CAACCCACTGTCATGACCGT 60.250 55.000 22.85 19.47 0.00 4.83
1912 1997 0.472471 AACCCACTGTCATGACCGTT 59.528 50.000 22.85 13.33 0.00 4.44
1913 1998 0.472471 ACCCACTGTCATGACCGTTT 59.528 50.000 22.85 6.73 0.00 3.60
1914 1999 1.156736 CCCACTGTCATGACCGTTTC 58.843 55.000 22.85 0.00 0.00 2.78
1915 2000 1.156736 CCACTGTCATGACCGTTTCC 58.843 55.000 22.85 0.00 0.00 3.13
1916 2001 1.542328 CCACTGTCATGACCGTTTCCA 60.542 52.381 22.85 1.54 0.00 3.53
1917 2002 2.217750 CACTGTCATGACCGTTTCCAA 58.782 47.619 22.85 0.71 0.00 3.53
1918 2003 2.224079 CACTGTCATGACCGTTTCCAAG 59.776 50.000 22.85 12.86 0.00 3.61
1919 2004 1.197721 CTGTCATGACCGTTTCCAAGC 59.802 52.381 22.85 0.00 0.00 4.01
1920 2005 0.521735 GTCATGACCGTTTCCAAGCC 59.478 55.000 15.31 0.00 0.00 4.35
1921 2006 0.608035 TCATGACCGTTTCCAAGCCC 60.608 55.000 0.00 0.00 0.00 5.19
1922 2007 1.674322 ATGACCGTTTCCAAGCCCG 60.674 57.895 0.00 0.00 0.00 6.13
1923 2008 3.733960 GACCGTTTCCAAGCCCGC 61.734 66.667 0.00 0.00 0.00 6.13
1924 2009 4.572571 ACCGTTTCCAAGCCCGCA 62.573 61.111 0.00 0.00 0.00 5.69
1925 2010 3.291383 CCGTTTCCAAGCCCGCAA 61.291 61.111 0.00 0.00 0.00 4.85
1926 2011 2.255252 CGTTTCCAAGCCCGCAAG 59.745 61.111 0.00 0.00 0.00 4.01
1927 2012 2.551912 CGTTTCCAAGCCCGCAAGT 61.552 57.895 0.00 0.00 0.00 3.16
1928 2013 1.007387 GTTTCCAAGCCCGCAAGTG 60.007 57.895 0.00 0.00 0.00 3.16
1929 2014 1.454847 TTTCCAAGCCCGCAAGTGT 60.455 52.632 0.00 0.00 0.00 3.55
1930 2015 1.040339 TTTCCAAGCCCGCAAGTGTT 61.040 50.000 0.00 0.00 0.00 3.32
1931 2016 1.040339 TTCCAAGCCCGCAAGTGTTT 61.040 50.000 0.00 0.00 0.00 2.83
1932 2017 1.007387 CCAAGCCCGCAAGTGTTTC 60.007 57.895 0.00 0.00 0.00 2.78
1933 2018 1.732917 CAAGCCCGCAAGTGTTTCA 59.267 52.632 0.00 0.00 0.00 2.69
1934 2019 0.102120 CAAGCCCGCAAGTGTTTCAA 59.898 50.000 0.00 0.00 0.00 2.69
1935 2020 0.102300 AAGCCCGCAAGTGTTTCAAC 59.898 50.000 0.00 0.00 0.00 3.18
1936 2021 1.299850 GCCCGCAAGTGTTTCAACC 60.300 57.895 0.00 0.00 0.00 3.77
1937 2022 2.010582 GCCCGCAAGTGTTTCAACCA 62.011 55.000 0.00 0.00 0.00 3.67
1938 2023 0.248866 CCCGCAAGTGTTTCAACCAC 60.249 55.000 0.00 0.00 0.00 4.16
1939 2024 0.248866 CCGCAAGTGTTTCAACCACC 60.249 55.000 0.00 0.00 0.00 4.61
1940 2025 0.591236 CGCAAGTGTTTCAACCACCG 60.591 55.000 0.00 0.00 0.00 4.94
1941 2026 0.736053 GCAAGTGTTTCAACCACCGA 59.264 50.000 0.00 0.00 0.00 4.69
1942 2027 1.133407 GCAAGTGTTTCAACCACCGAA 59.867 47.619 0.00 0.00 0.00 4.30
1943 2028 2.792749 CAAGTGTTTCAACCACCGAAC 58.207 47.619 0.00 0.00 0.00 3.95
1944 2029 1.385528 AGTGTTTCAACCACCGAACC 58.614 50.000 0.00 0.00 0.00 3.62
1945 2030 1.064979 AGTGTTTCAACCACCGAACCT 60.065 47.619 0.00 0.00 0.00 3.50
1946 2031 1.746787 GTGTTTCAACCACCGAACCTT 59.253 47.619 0.00 0.00 0.00 3.50
1947 2032 2.164827 GTGTTTCAACCACCGAACCTTT 59.835 45.455 0.00 0.00 0.00 3.11
1948 2033 2.826725 TGTTTCAACCACCGAACCTTTT 59.173 40.909 0.00 0.00 0.00 2.27
1949 2034 3.258622 TGTTTCAACCACCGAACCTTTTT 59.741 39.130 0.00 0.00 0.00 1.94
1969 2054 2.561478 TTGTCCTAACAGGTTCAGGC 57.439 50.000 0.00 0.00 36.57 4.85
1970 2055 1.429930 TGTCCTAACAGGTTCAGGCA 58.570 50.000 0.00 0.00 36.53 4.75
1971 2056 1.771854 TGTCCTAACAGGTTCAGGCAA 59.228 47.619 0.00 0.00 36.53 4.52
1972 2057 2.375174 TGTCCTAACAGGTTCAGGCAAT 59.625 45.455 0.00 0.00 36.53 3.56
1973 2058 2.749621 GTCCTAACAGGTTCAGGCAATG 59.250 50.000 0.00 0.00 36.53 2.82
1974 2059 2.375174 TCCTAACAGGTTCAGGCAATGT 59.625 45.455 0.00 0.00 36.53 2.71
1975 2060 3.157087 CCTAACAGGTTCAGGCAATGTT 58.843 45.455 0.00 0.00 37.77 2.71
1976 2061 3.573967 CCTAACAGGTTCAGGCAATGTTT 59.426 43.478 0.00 0.00 35.77 2.83
1977 2062 3.733443 AACAGGTTCAGGCAATGTTTC 57.267 42.857 0.00 0.00 30.18 2.78
1978 2063 1.608590 ACAGGTTCAGGCAATGTTTCG 59.391 47.619 0.00 0.00 0.00 3.46
1979 2064 1.879380 CAGGTTCAGGCAATGTTTCGA 59.121 47.619 0.00 0.00 0.00 3.71
1980 2065 2.095567 CAGGTTCAGGCAATGTTTCGAG 60.096 50.000 0.00 0.00 0.00 4.04
1981 2066 2.151202 GGTTCAGGCAATGTTTCGAGA 58.849 47.619 0.00 0.00 0.00 4.04
1982 2067 2.552315 GGTTCAGGCAATGTTTCGAGAA 59.448 45.455 0.00 0.00 0.00 2.87
1983 2068 3.191371 GGTTCAGGCAATGTTTCGAGAAT 59.809 43.478 0.00 0.00 0.00 2.40
1984 2069 4.161333 GTTCAGGCAATGTTTCGAGAATG 58.839 43.478 0.00 0.00 0.00 2.67
1985 2070 3.411446 TCAGGCAATGTTTCGAGAATGT 58.589 40.909 0.00 0.00 0.00 2.71
1986 2071 4.574892 TCAGGCAATGTTTCGAGAATGTA 58.425 39.130 0.00 0.00 0.00 2.29
1987 2072 5.185454 TCAGGCAATGTTTCGAGAATGTAT 58.815 37.500 0.00 0.00 0.00 2.29
1988 2073 5.647658 TCAGGCAATGTTTCGAGAATGTATT 59.352 36.000 0.00 0.00 0.00 1.89
1989 2074 5.967674 CAGGCAATGTTTCGAGAATGTATTC 59.032 40.000 0.00 0.00 37.06 1.75
1990 2075 5.647658 AGGCAATGTTTCGAGAATGTATTCA 59.352 36.000 7.30 0.00 39.23 2.57
1991 2076 6.319658 AGGCAATGTTTCGAGAATGTATTCAT 59.680 34.615 7.30 0.00 39.23 2.57
1992 2077 6.974622 GGCAATGTTTCGAGAATGTATTCATT 59.025 34.615 7.30 0.00 45.57 2.57
1993 2078 7.489113 GGCAATGTTTCGAGAATGTATTCATTT 59.511 33.333 7.30 0.00 43.33 2.32
1994 2079 8.863049 GCAATGTTTCGAGAATGTATTCATTTT 58.137 29.630 7.30 0.00 43.33 1.82
2026 2111 8.853077 AAAATTGAATGAAAAGGATCTTTCCC 57.147 30.769 5.30 0.00 43.76 3.97
2027 2112 7.803487 AATTGAATGAAAAGGATCTTTCCCT 57.197 32.000 5.30 0.00 43.76 4.20
2028 2113 6.840780 TTGAATGAAAAGGATCTTTCCCTC 57.159 37.500 5.30 3.32 43.76 4.30
2029 2114 4.943705 TGAATGAAAAGGATCTTTCCCTCG 59.056 41.667 5.30 0.00 43.76 4.63
2030 2115 4.844349 ATGAAAAGGATCTTTCCCTCGA 57.156 40.909 5.30 0.00 43.76 4.04
2031 2116 4.844349 TGAAAAGGATCTTTCCCTCGAT 57.156 40.909 5.30 0.00 43.76 3.59
2032 2117 5.179452 TGAAAAGGATCTTTCCCTCGATT 57.821 39.130 5.30 0.00 43.76 3.34
2033 2118 5.570320 TGAAAAGGATCTTTCCCTCGATTT 58.430 37.500 5.30 0.00 43.76 2.17
2034 2119 5.648092 TGAAAAGGATCTTTCCCTCGATTTC 59.352 40.000 5.30 0.00 43.76 2.17
2035 2120 4.844349 AAGGATCTTTCCCTCGATTTCA 57.156 40.909 0.00 0.00 43.76 2.69
2036 2121 5.379706 AAGGATCTTTCCCTCGATTTCAT 57.620 39.130 0.00 0.00 43.76 2.57
2037 2122 5.379706 AGGATCTTTCCCTCGATTTCATT 57.620 39.130 0.00 0.00 43.76 2.57
2038 2123 6.500589 AGGATCTTTCCCTCGATTTCATTA 57.499 37.500 0.00 0.00 43.76 1.90
2039 2124 6.900194 AGGATCTTTCCCTCGATTTCATTAA 58.100 36.000 0.00 0.00 43.76 1.40
2040 2125 7.346471 AGGATCTTTCCCTCGATTTCATTAAA 58.654 34.615 0.00 0.00 43.76 1.52
2041 2126 7.500559 AGGATCTTTCCCTCGATTTCATTAAAG 59.499 37.037 0.00 0.00 43.76 1.85
2042 2127 7.499232 GGATCTTTCCCTCGATTTCATTAAAGA 59.501 37.037 0.00 0.00 36.48 2.52
2043 2128 8.807948 ATCTTTCCCTCGATTTCATTAAAGAA 57.192 30.769 0.00 0.00 35.89 2.52
2044 2129 8.630054 TCTTTCCCTCGATTTCATTAAAGAAA 57.370 30.769 8.20 8.20 41.31 2.52
2045 2130 8.512138 TCTTTCCCTCGATTTCATTAAAGAAAC 58.488 33.333 7.95 2.84 40.03 2.78
2046 2131 6.753107 TCCCTCGATTTCATTAAAGAAACC 57.247 37.500 7.95 0.00 40.03 3.27
2047 2132 6.242396 TCCCTCGATTTCATTAAAGAAACCA 58.758 36.000 7.95 0.00 40.03 3.67
2048 2133 6.717540 TCCCTCGATTTCATTAAAGAAACCAA 59.282 34.615 7.95 0.00 40.03 3.67
2049 2134 7.231722 TCCCTCGATTTCATTAAAGAAACCAAA 59.768 33.333 7.95 0.00 40.03 3.28
2050 2135 8.034804 CCCTCGATTTCATTAAAGAAACCAAAT 58.965 33.333 7.95 0.00 40.03 2.32
2066 2151 9.277783 AGAAACCAAATAGTCATATCATACAGC 57.722 33.333 0.00 0.00 0.00 4.40
2067 2152 7.986085 AACCAAATAGTCATATCATACAGCC 57.014 36.000 0.00 0.00 0.00 4.85
2068 2153 7.078249 ACCAAATAGTCATATCATACAGCCA 57.922 36.000 0.00 0.00 0.00 4.75
2069 2154 7.517320 ACCAAATAGTCATATCATACAGCCAA 58.483 34.615 0.00 0.00 0.00 4.52
2070 2155 7.663081 ACCAAATAGTCATATCATACAGCCAAG 59.337 37.037 0.00 0.00 0.00 3.61
2071 2156 7.879677 CCAAATAGTCATATCATACAGCCAAGA 59.120 37.037 0.00 0.00 0.00 3.02
2072 2157 8.715998 CAAATAGTCATATCATACAGCCAAGAC 58.284 37.037 0.00 0.00 0.00 3.01
2073 2158 5.876651 AGTCATATCATACAGCCAAGACA 57.123 39.130 0.00 0.00 0.00 3.41
2074 2159 5.605534 AGTCATATCATACAGCCAAGACAC 58.394 41.667 0.00 0.00 0.00 3.67
2075 2160 5.129320 AGTCATATCATACAGCCAAGACACA 59.871 40.000 0.00 0.00 0.00 3.72
2076 2161 5.817296 GTCATATCATACAGCCAAGACACAA 59.183 40.000 0.00 0.00 0.00 3.33
2077 2162 6.316140 GTCATATCATACAGCCAAGACACAAA 59.684 38.462 0.00 0.00 0.00 2.83
2078 2163 6.316140 TCATATCATACAGCCAAGACACAAAC 59.684 38.462 0.00 0.00 0.00 2.93
2079 2164 3.814625 TCATACAGCCAAGACACAAACA 58.185 40.909 0.00 0.00 0.00 2.83
2080 2165 3.563808 TCATACAGCCAAGACACAAACAC 59.436 43.478 0.00 0.00 0.00 3.32
2081 2166 1.102978 ACAGCCAAGACACAAACACC 58.897 50.000 0.00 0.00 0.00 4.16
2082 2167 0.029300 CAGCCAAGACACAAACACCG 59.971 55.000 0.00 0.00 0.00 4.94
2083 2168 1.299089 GCCAAGACACAAACACCGC 60.299 57.895 0.00 0.00 0.00 5.68
2084 2169 1.724582 GCCAAGACACAAACACCGCT 61.725 55.000 0.00 0.00 0.00 5.52
2085 2170 1.588674 CCAAGACACAAACACCGCTA 58.411 50.000 0.00 0.00 0.00 4.26
2086 2171 1.944024 CCAAGACACAAACACCGCTAA 59.056 47.619 0.00 0.00 0.00 3.09
2087 2172 2.032030 CCAAGACACAAACACCGCTAAG 60.032 50.000 0.00 0.00 0.00 2.18
2088 2173 2.612212 CAAGACACAAACACCGCTAAGT 59.388 45.455 0.00 0.00 0.00 2.24
2089 2174 2.914059 AGACACAAACACCGCTAAGTT 58.086 42.857 0.00 0.00 0.00 2.66
2090 2175 3.275999 AGACACAAACACCGCTAAGTTT 58.724 40.909 0.00 0.00 38.40 2.66
2091 2176 4.444536 AGACACAAACACCGCTAAGTTTA 58.555 39.130 0.00 0.00 36.28 2.01
2092 2177 4.877251 AGACACAAACACCGCTAAGTTTAA 59.123 37.500 0.00 0.00 36.28 1.52
2093 2178 5.007332 AGACACAAACACCGCTAAGTTTAAG 59.993 40.000 0.00 0.00 36.28 1.85
2094 2179 4.877251 ACACAAACACCGCTAAGTTTAAGA 59.123 37.500 0.00 0.00 36.28 2.10
2095 2180 5.354792 ACACAAACACCGCTAAGTTTAAGAA 59.645 36.000 0.00 0.00 36.28 2.52
2096 2181 6.127952 ACACAAACACCGCTAAGTTTAAGAAA 60.128 34.615 0.00 0.00 36.28 2.52
2097 2182 6.413818 CACAAACACCGCTAAGTTTAAGAAAG 59.586 38.462 0.00 0.00 36.28 2.62
2098 2183 6.316890 ACAAACACCGCTAAGTTTAAGAAAGA 59.683 34.615 0.00 0.00 36.28 2.52
2099 2184 5.919272 ACACCGCTAAGTTTAAGAAAGAC 57.081 39.130 0.00 0.00 0.00 3.01
2100 2185 5.362263 ACACCGCTAAGTTTAAGAAAGACA 58.638 37.500 0.00 0.00 0.00 3.41
2101 2186 5.818857 ACACCGCTAAGTTTAAGAAAGACAA 59.181 36.000 0.00 0.00 0.00 3.18
2102 2187 6.018180 ACACCGCTAAGTTTAAGAAAGACAAG 60.018 38.462 0.00 0.00 0.00 3.16
2103 2188 5.469084 ACCGCTAAGTTTAAGAAAGACAAGG 59.531 40.000 0.00 0.00 0.00 3.61
2104 2189 5.699458 CCGCTAAGTTTAAGAAAGACAAGGA 59.301 40.000 0.00 0.00 0.00 3.36
2105 2190 6.371825 CCGCTAAGTTTAAGAAAGACAAGGAT 59.628 38.462 0.00 0.00 0.00 3.24
2106 2191 7.237173 CGCTAAGTTTAAGAAAGACAAGGATG 58.763 38.462 0.00 0.00 0.00 3.51
2107 2192 7.530863 GCTAAGTTTAAGAAAGACAAGGATGG 58.469 38.462 0.00 0.00 0.00 3.51
2108 2193 5.966742 AGTTTAAGAAAGACAAGGATGGC 57.033 39.130 0.00 0.00 33.34 4.40
2109 2194 5.385198 AGTTTAAGAAAGACAAGGATGGCA 58.615 37.500 0.00 0.00 36.86 4.92
2110 2195 5.833131 AGTTTAAGAAAGACAAGGATGGCAA 59.167 36.000 0.00 0.00 36.86 4.52
2111 2196 5.705609 TTAAGAAAGACAAGGATGGCAAC 57.294 39.130 0.00 0.00 36.86 4.17
2125 2210 1.934589 GGCAACAACTCCCAAAACAC 58.065 50.000 0.00 0.00 0.00 3.32
2126 2211 1.555477 GCAACAACTCCCAAAACACG 58.445 50.000 0.00 0.00 0.00 4.49
2127 2212 1.555477 CAACAACTCCCAAAACACGC 58.445 50.000 0.00 0.00 0.00 5.34
2128 2213 1.135257 CAACAACTCCCAAAACACGCA 60.135 47.619 0.00 0.00 0.00 5.24
2129 2214 0.454196 ACAACTCCCAAAACACGCAC 59.546 50.000 0.00 0.00 0.00 5.34
2130 2215 0.453793 CAACTCCCAAAACACGCACA 59.546 50.000 0.00 0.00 0.00 4.57
2131 2216 0.454196 AACTCCCAAAACACGCACAC 59.546 50.000 0.00 0.00 0.00 3.82
2132 2217 0.678366 ACTCCCAAAACACGCACACA 60.678 50.000 0.00 0.00 0.00 3.72
2133 2218 0.248458 CTCCCAAAACACGCACACAC 60.248 55.000 0.00 0.00 0.00 3.82
2134 2219 1.226831 CCCAAAACACGCACACACC 60.227 57.895 0.00 0.00 0.00 4.16
2135 2220 1.226831 CCAAAACACGCACACACCC 60.227 57.895 0.00 0.00 0.00 4.61
2136 2221 1.662438 CCAAAACACGCACACACCCT 61.662 55.000 0.00 0.00 0.00 4.34
2137 2222 0.248458 CAAAACACGCACACACCCTC 60.248 55.000 0.00 0.00 0.00 4.30
2138 2223 0.678366 AAAACACGCACACACCCTCA 60.678 50.000 0.00 0.00 0.00 3.86
2139 2224 1.373590 AAACACGCACACACCCTCAC 61.374 55.000 0.00 0.00 0.00 3.51
2140 2225 2.203001 CACGCACACACCCTCACA 60.203 61.111 0.00 0.00 0.00 3.58
2141 2226 2.203015 ACGCACACACCCTCACAC 60.203 61.111 0.00 0.00 0.00 3.82
2142 2227 2.972505 CGCACACACCCTCACACC 60.973 66.667 0.00 0.00 0.00 4.16
2143 2228 2.510906 GCACACACCCTCACACCT 59.489 61.111 0.00 0.00 0.00 4.00
2144 2229 1.893808 GCACACACCCTCACACCTG 60.894 63.158 0.00 0.00 0.00 4.00
2145 2230 1.893808 CACACACCCTCACACCTGC 60.894 63.158 0.00 0.00 0.00 4.85
2146 2231 2.666190 CACACCCTCACACCTGCG 60.666 66.667 0.00 0.00 0.00 5.18
2147 2232 2.842462 ACACCCTCACACCTGCGA 60.842 61.111 0.00 0.00 0.00 5.10
2148 2233 2.425592 CACCCTCACACCTGCGAA 59.574 61.111 0.00 0.00 0.00 4.70
2149 2234 1.003355 CACCCTCACACCTGCGAAT 60.003 57.895 0.00 0.00 0.00 3.34
2150 2235 0.249120 CACCCTCACACCTGCGAATA 59.751 55.000 0.00 0.00 0.00 1.75
2151 2236 0.249398 ACCCTCACACCTGCGAATAC 59.751 55.000 0.00 0.00 0.00 1.89
2152 2237 0.249120 CCCTCACACCTGCGAATACA 59.751 55.000 0.00 0.00 0.00 2.29
2153 2238 1.338674 CCCTCACACCTGCGAATACAA 60.339 52.381 0.00 0.00 0.00 2.41
2154 2239 2.002586 CCTCACACCTGCGAATACAAG 58.997 52.381 0.00 0.00 0.00 3.16
2155 2240 2.612972 CCTCACACCTGCGAATACAAGT 60.613 50.000 0.00 0.00 0.00 3.16
2156 2241 3.368013 CCTCACACCTGCGAATACAAGTA 60.368 47.826 0.00 0.00 0.00 2.24
2157 2242 4.242475 CTCACACCTGCGAATACAAGTAA 58.758 43.478 0.00 0.00 0.00 2.24
2158 2243 4.633175 TCACACCTGCGAATACAAGTAAA 58.367 39.130 0.00 0.00 0.00 2.01
2159 2244 4.688879 TCACACCTGCGAATACAAGTAAAG 59.311 41.667 0.00 0.00 0.00 1.85
2160 2245 4.688879 CACACCTGCGAATACAAGTAAAGA 59.311 41.667 0.00 0.00 0.00 2.52
2161 2246 4.929808 ACACCTGCGAATACAAGTAAAGAG 59.070 41.667 0.00 0.00 0.00 2.85
2162 2247 4.330074 CACCTGCGAATACAAGTAAAGAGG 59.670 45.833 0.00 0.00 0.00 3.69
2163 2248 3.871594 CCTGCGAATACAAGTAAAGAGGG 59.128 47.826 0.00 0.00 0.00 4.30
2164 2249 4.382685 CCTGCGAATACAAGTAAAGAGGGA 60.383 45.833 0.00 0.00 0.00 4.20
2165 2250 5.353394 TGCGAATACAAGTAAAGAGGGAT 57.647 39.130 0.00 0.00 0.00 3.85
2166 2251 6.462487 CCTGCGAATACAAGTAAAGAGGGATA 60.462 42.308 0.00 0.00 0.00 2.59
2167 2252 7.062749 TGCGAATACAAGTAAAGAGGGATAT 57.937 36.000 0.00 0.00 0.00 1.63
2168 2253 6.929049 TGCGAATACAAGTAAAGAGGGATATG 59.071 38.462 0.00 0.00 0.00 1.78
2169 2254 6.128526 GCGAATACAAGTAAAGAGGGATATGC 60.129 42.308 0.00 0.00 0.00 3.14
2170 2255 6.929049 CGAATACAAGTAAAGAGGGATATGCA 59.071 38.462 0.00 0.00 0.00 3.96
2171 2256 7.441157 CGAATACAAGTAAAGAGGGATATGCAA 59.559 37.037 0.00 0.00 0.00 4.08
2172 2257 9.289782 GAATACAAGTAAAGAGGGATATGCAAT 57.710 33.333 0.00 0.00 0.00 3.56
2174 2259 9.950496 ATACAAGTAAAGAGGGATATGCAATAG 57.050 33.333 0.00 0.00 28.50 1.73
2175 2260 8.034313 ACAAGTAAAGAGGGATATGCAATAGA 57.966 34.615 0.00 0.00 28.50 1.98
2176 2261 8.494433 ACAAGTAAAGAGGGATATGCAATAGAA 58.506 33.333 0.00 0.00 28.50 2.10
2177 2262 8.778358 CAAGTAAAGAGGGATATGCAATAGAAC 58.222 37.037 0.00 0.00 28.50 3.01
2178 2263 8.034313 AGTAAAGAGGGATATGCAATAGAACA 57.966 34.615 0.00 0.00 28.50 3.18
2179 2264 7.934120 AGTAAAGAGGGATATGCAATAGAACAC 59.066 37.037 0.00 0.00 28.50 3.32
2180 2265 5.234466 AGAGGGATATGCAATAGAACACC 57.766 43.478 0.00 0.00 28.50 4.16
2181 2266 4.042187 AGAGGGATATGCAATAGAACACCC 59.958 45.833 0.00 0.00 35.53 4.61
2182 2267 3.721575 AGGGATATGCAATAGAACACCCA 59.278 43.478 0.00 0.00 37.49 4.51
2183 2268 4.354987 AGGGATATGCAATAGAACACCCAT 59.645 41.667 0.00 0.00 37.49 4.00
2184 2269 4.702131 GGGATATGCAATAGAACACCCATC 59.298 45.833 0.00 0.00 35.41 3.51
2185 2270 4.393062 GGATATGCAATAGAACACCCATCG 59.607 45.833 0.00 0.00 28.50 3.84
2186 2271 3.558931 ATGCAATAGAACACCCATCGA 57.441 42.857 0.00 0.00 0.00 3.59
2187 2272 3.342377 TGCAATAGAACACCCATCGAA 57.658 42.857 0.00 0.00 0.00 3.71
2188 2273 3.680490 TGCAATAGAACACCCATCGAAA 58.320 40.909 0.00 0.00 0.00 3.46
2189 2274 3.438781 TGCAATAGAACACCCATCGAAAC 59.561 43.478 0.00 0.00 0.00 2.78
2190 2275 3.689649 GCAATAGAACACCCATCGAAACT 59.310 43.478 0.00 0.00 0.00 2.66
2191 2276 4.873827 GCAATAGAACACCCATCGAAACTA 59.126 41.667 0.00 0.00 0.00 2.24
2192 2277 5.006746 GCAATAGAACACCCATCGAAACTAG 59.993 44.000 0.00 0.00 0.00 2.57
2193 2278 6.338146 CAATAGAACACCCATCGAAACTAGA 58.662 40.000 0.00 0.00 0.00 2.43
2194 2279 6.732896 ATAGAACACCCATCGAAACTAGAT 57.267 37.500 0.00 0.00 0.00 1.98
2195 2280 5.012328 AGAACACCCATCGAAACTAGATC 57.988 43.478 0.00 0.00 0.00 2.75
2196 2281 4.466370 AGAACACCCATCGAAACTAGATCA 59.534 41.667 0.00 0.00 0.00 2.92
2197 2282 4.819105 ACACCCATCGAAACTAGATCAA 57.181 40.909 0.00 0.00 0.00 2.57
2198 2283 5.160607 ACACCCATCGAAACTAGATCAAA 57.839 39.130 0.00 0.00 0.00 2.69
2199 2284 5.556915 ACACCCATCGAAACTAGATCAAAA 58.443 37.500 0.00 0.00 0.00 2.44
2200 2285 5.411669 ACACCCATCGAAACTAGATCAAAAC 59.588 40.000 0.00 0.00 0.00 2.43
2201 2286 4.630069 ACCCATCGAAACTAGATCAAAACG 59.370 41.667 0.00 0.00 0.00 3.60
2202 2287 4.494199 CCCATCGAAACTAGATCAAAACGC 60.494 45.833 0.00 0.00 0.00 4.84
2203 2288 3.965209 TCGAAACTAGATCAAAACGCG 57.035 42.857 3.53 3.53 0.00 6.01
2204 2289 2.091588 TCGAAACTAGATCAAAACGCGC 59.908 45.455 5.73 0.00 0.00 6.86
2205 2290 2.092211 CGAAACTAGATCAAAACGCGCT 59.908 45.455 5.73 0.00 0.00 5.92
2206 2291 3.660777 GAAACTAGATCAAAACGCGCTC 58.339 45.455 5.73 0.00 0.00 5.03
2207 2292 1.641577 ACTAGATCAAAACGCGCTCC 58.358 50.000 5.73 0.00 0.00 4.70
2208 2293 1.067142 ACTAGATCAAAACGCGCTCCA 60.067 47.619 5.73 0.00 0.00 3.86
2209 2294 1.999735 CTAGATCAAAACGCGCTCCAA 59.000 47.619 5.73 0.00 0.00 3.53
2210 2295 1.234821 AGATCAAAACGCGCTCCAAA 58.765 45.000 5.73 0.00 0.00 3.28
2211 2296 1.812571 AGATCAAAACGCGCTCCAAAT 59.187 42.857 5.73 0.00 0.00 2.32
2212 2297 1.913403 GATCAAAACGCGCTCCAAATG 59.087 47.619 5.73 0.00 0.00 2.32
2213 2298 0.662970 TCAAAACGCGCTCCAAATGC 60.663 50.000 5.73 0.00 0.00 3.56
2223 2308 2.863739 GCTCCAAATGCGTTTTACTCC 58.136 47.619 0.00 0.00 0.00 3.85
2224 2309 2.227865 GCTCCAAATGCGTTTTACTCCA 59.772 45.455 0.00 0.00 0.00 3.86
2225 2310 3.119495 GCTCCAAATGCGTTTTACTCCAT 60.119 43.478 0.00 0.00 0.00 3.41
2226 2311 4.618227 GCTCCAAATGCGTTTTACTCCATT 60.618 41.667 0.00 0.00 0.00 3.16
2227 2312 5.461032 TCCAAATGCGTTTTACTCCATTT 57.539 34.783 0.00 0.00 38.14 2.32
2228 2313 6.576662 TCCAAATGCGTTTTACTCCATTTA 57.423 33.333 0.00 0.00 36.17 1.40
2229 2314 6.383415 TCCAAATGCGTTTTACTCCATTTAC 58.617 36.000 0.00 0.00 36.17 2.01
2230 2315 5.575218 CCAAATGCGTTTTACTCCATTTACC 59.425 40.000 0.00 0.00 36.17 2.85
2231 2316 4.976224 ATGCGTTTTACTCCATTTACCC 57.024 40.909 0.00 0.00 0.00 3.69
2232 2317 3.083293 TGCGTTTTACTCCATTTACCCC 58.917 45.455 0.00 0.00 0.00 4.95
2233 2318 2.424601 GCGTTTTACTCCATTTACCCCC 59.575 50.000 0.00 0.00 0.00 5.40
2247 2332 3.252284 CCCCCTCAGCCACTGTGT 61.252 66.667 7.08 0.00 32.61 3.72
2248 2333 2.033141 CCCCTCAGCCACTGTGTG 59.967 66.667 7.08 0.00 32.61 3.82
2249 2334 2.519622 CCCCTCAGCCACTGTGTGA 61.520 63.158 7.08 4.12 35.23 3.58
2250 2335 1.302033 CCCTCAGCCACTGTGTGAC 60.302 63.158 7.08 0.00 35.23 3.67
2251 2336 1.447217 CCTCAGCCACTGTGTGACA 59.553 57.895 7.08 0.00 35.23 3.58
2262 2347 3.056952 CTGTGTGACAGCAGTTTCAAC 57.943 47.619 6.91 0.00 39.62 3.18
2263 2348 1.742831 TGTGTGACAGCAGTTTCAACC 59.257 47.619 0.00 0.00 0.00 3.77
2264 2349 1.742831 GTGTGACAGCAGTTTCAACCA 59.257 47.619 0.00 0.00 0.00 3.67
2265 2350 2.358898 GTGTGACAGCAGTTTCAACCAT 59.641 45.455 0.00 0.00 0.00 3.55
2266 2351 2.618241 TGTGACAGCAGTTTCAACCATC 59.382 45.455 0.00 0.00 0.00 3.51
2267 2352 2.880890 GTGACAGCAGTTTCAACCATCT 59.119 45.455 0.00 0.00 0.00 2.90
2268 2353 3.316308 GTGACAGCAGTTTCAACCATCTT 59.684 43.478 0.00 0.00 0.00 2.40
2269 2354 3.565482 TGACAGCAGTTTCAACCATCTTC 59.435 43.478 0.00 0.00 0.00 2.87
2270 2355 2.887152 ACAGCAGTTTCAACCATCTTCC 59.113 45.455 0.00 0.00 0.00 3.46
2271 2356 2.886523 CAGCAGTTTCAACCATCTTCCA 59.113 45.455 0.00 0.00 0.00 3.53
2272 2357 3.318839 CAGCAGTTTCAACCATCTTCCAA 59.681 43.478 0.00 0.00 0.00 3.53
2273 2358 4.021719 CAGCAGTTTCAACCATCTTCCAAT 60.022 41.667 0.00 0.00 0.00 3.16
2274 2359 4.219288 AGCAGTTTCAACCATCTTCCAATC 59.781 41.667 0.00 0.00 0.00 2.67
2275 2360 4.219288 GCAGTTTCAACCATCTTCCAATCT 59.781 41.667 0.00 0.00 0.00 2.40
2276 2361 5.279156 GCAGTTTCAACCATCTTCCAATCTT 60.279 40.000 0.00 0.00 0.00 2.40
2277 2362 6.154445 CAGTTTCAACCATCTTCCAATCTTG 58.846 40.000 0.00 0.00 0.00 3.02
2290 2375 3.800531 CCAATCTTGGGATCCAAAATGC 58.199 45.455 15.23 0.00 43.44 3.56
2291 2376 3.432608 CCAATCTTGGGATCCAAAATGCC 60.433 47.826 15.23 0.00 43.44 4.40
2292 2377 1.864669 TCTTGGGATCCAAAATGCCC 58.135 50.000 15.23 0.00 43.44 5.36
2294 2379 2.989480 TGGGATCCAAAATGCCCAC 58.011 52.632 15.23 0.00 45.31 4.61
2295 2380 0.413037 TGGGATCCAAAATGCCCACT 59.587 50.000 15.23 0.00 45.31 4.00
2296 2381 1.114627 GGGATCCAAAATGCCCACTC 58.885 55.000 15.23 0.00 40.39 3.51
2297 2382 1.114627 GGATCCAAAATGCCCACTCC 58.885 55.000 6.95 0.00 0.00 3.85
2298 2383 1.114627 GATCCAAAATGCCCACTCCC 58.885 55.000 0.00 0.00 0.00 4.30
2299 2384 0.684153 ATCCAAAATGCCCACTCCCG 60.684 55.000 0.00 0.00 0.00 5.14
2300 2385 2.573340 CAAAATGCCCACTCCCGC 59.427 61.111 0.00 0.00 0.00 6.13
2301 2386 2.679996 AAAATGCCCACTCCCGCC 60.680 61.111 0.00 0.00 0.00 6.13
2309 2394 4.680237 CACTCCCGCCGTGCTTGA 62.680 66.667 0.00 0.00 0.00 3.02
2310 2395 3.936203 ACTCCCGCCGTGCTTGAA 61.936 61.111 0.00 0.00 0.00 2.69
2311 2396 2.668212 CTCCCGCCGTGCTTGAAA 60.668 61.111 0.00 0.00 0.00 2.69
2312 2397 2.668212 TCCCGCCGTGCTTGAAAG 60.668 61.111 0.00 0.00 0.00 2.62
2313 2398 2.668212 CCCGCCGTGCTTGAAAGA 60.668 61.111 0.00 0.00 0.00 2.52
2314 2399 2.040544 CCCGCCGTGCTTGAAAGAT 61.041 57.895 0.00 0.00 0.00 2.40
2315 2400 1.586154 CCCGCCGTGCTTGAAAGATT 61.586 55.000 0.00 0.00 0.00 2.40
2316 2401 0.240945 CCGCCGTGCTTGAAAGATTT 59.759 50.000 0.00 0.00 0.00 2.17
2317 2402 1.606606 CGCCGTGCTTGAAAGATTTC 58.393 50.000 0.00 0.00 37.69 2.17
2318 2403 1.069296 CGCCGTGCTTGAAAGATTTCA 60.069 47.619 3.91 3.91 44.78 2.69
2319 2404 2.319472 GCCGTGCTTGAAAGATTTCAC 58.681 47.619 7.49 0.00 45.99 3.18
2320 2405 2.030805 GCCGTGCTTGAAAGATTTCACT 60.031 45.455 7.49 0.00 45.99 3.41
2321 2406 3.558505 CCGTGCTTGAAAGATTTCACTG 58.441 45.455 7.49 5.55 45.99 3.66
2322 2407 3.558505 CGTGCTTGAAAGATTTCACTGG 58.441 45.455 7.49 3.40 45.99 4.00
2323 2408 3.311966 GTGCTTGAAAGATTTCACTGGC 58.688 45.455 7.49 11.96 45.99 4.85
2324 2409 2.030893 TGCTTGAAAGATTTCACTGGCG 60.031 45.455 7.49 0.00 45.99 5.69
2325 2410 2.226437 GCTTGAAAGATTTCACTGGCGA 59.774 45.455 7.49 0.00 45.99 5.54
2326 2411 3.814945 CTTGAAAGATTTCACTGGCGAC 58.185 45.455 7.49 0.00 45.99 5.19
2327 2412 3.126001 TGAAAGATTTCACTGGCGACT 57.874 42.857 3.91 0.00 41.88 4.18
2328 2413 3.067106 TGAAAGATTTCACTGGCGACTC 58.933 45.455 3.91 0.00 41.88 3.36
2329 2414 1.714794 AAGATTTCACTGGCGACTCG 58.285 50.000 0.00 0.00 0.00 4.18
2330 2415 0.888619 AGATTTCACTGGCGACTCGA 59.111 50.000 1.63 0.00 0.00 4.04
2331 2416 1.478510 AGATTTCACTGGCGACTCGAT 59.521 47.619 1.63 0.00 0.00 3.59
2332 2417 1.855360 GATTTCACTGGCGACTCGATC 59.145 52.381 1.63 0.00 0.00 3.69
2333 2418 0.108804 TTTCACTGGCGACTCGATCC 60.109 55.000 1.63 0.00 0.00 3.36
2334 2419 1.248101 TTCACTGGCGACTCGATCCA 61.248 55.000 1.63 0.00 0.00 3.41
2336 2421 2.279120 CTGGCGACTCGATCCAGC 60.279 66.667 10.92 2.87 40.63 4.85
2337 2422 3.068064 TGGCGACTCGATCCAGCA 61.068 61.111 1.63 0.00 0.00 4.41
2338 2423 2.279120 GGCGACTCGATCCAGCAG 60.279 66.667 1.63 0.00 0.00 4.24
2339 2424 2.492090 GCGACTCGATCCAGCAGT 59.508 61.111 1.63 0.00 0.00 4.40
2340 2425 1.153745 GCGACTCGATCCAGCAGTT 60.154 57.895 1.63 0.00 0.00 3.16
2341 2426 1.416813 GCGACTCGATCCAGCAGTTG 61.417 60.000 1.63 0.00 0.00 3.16
2342 2427 0.109086 CGACTCGATCCAGCAGTTGT 60.109 55.000 0.00 0.00 0.00 3.32
2343 2428 1.354040 GACTCGATCCAGCAGTTGTG 58.646 55.000 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 9 7.169158 TGAACTTTCTTTCAAACTTGGTGAT 57.831 32.000 0.00 0.00 32.42 3.06
11 13 8.477984 TTTGATGAACTTTCTTTCAAACTTGG 57.522 30.769 12.64 0.00 38.95 3.61
87 89 8.293114 TGAACTTTTCTTGAAACTTGTTGAAC 57.707 30.769 10.62 0.00 0.00 3.18
88 90 9.139174 GATGAACTTTTCTTGAAACTTGTTGAA 57.861 29.630 10.62 0.00 0.00 2.69
147 149 8.292448 GCTGAACTTTTCTCAAACTTGATGATA 58.708 33.333 0.00 0.00 36.46 2.15
154 158 3.066760 CCCGCTGAACTTTTCTCAAACTT 59.933 43.478 0.00 0.00 0.00 2.66
259 282 7.315247 TCTCAAAATTGACGAACTTCTTTCA 57.685 32.000 0.00 0.00 31.62 2.69
387 413 6.721571 TTCTCACGTGATTACATCTTTTCC 57.278 37.500 20.40 0.00 0.00 3.13
389 415 7.174946 ACCAATTCTCACGTGATTACATCTTTT 59.825 33.333 20.40 0.61 0.00 2.27
407 437 1.076777 CCATCCGGCCACCAATTCT 60.077 57.895 2.24 0.00 0.00 2.40
419 449 2.309528 TAGCAAGCACTAACCATCCG 57.690 50.000 0.00 0.00 0.00 4.18
426 456 5.877012 CCTTCTCTGAATTAGCAAGCACTAA 59.123 40.000 0.00 0.00 36.60 2.24
444 474 0.685660 AAACCCGTGACCTCCTTCTC 59.314 55.000 0.00 0.00 0.00 2.87
447 477 0.396811 CTCAAACCCGTGACCTCCTT 59.603 55.000 0.00 0.00 0.00 3.36
452 482 2.258726 GCCACTCAAACCCGTGACC 61.259 63.158 0.00 0.00 33.04 4.02
455 485 2.908073 GCTGCCACTCAAACCCGTG 61.908 63.158 0.00 0.00 0.00 4.94
456 486 2.594592 GCTGCCACTCAAACCCGT 60.595 61.111 0.00 0.00 0.00 5.28
509 539 1.065782 GGCCGGCCCATTTACATTTTT 60.066 47.619 36.64 0.00 0.00 1.94
552 585 7.357695 GCAAATTTATAAGTGTTTTCGCAACGA 60.358 33.333 0.00 0.00 0.00 3.85
730 766 4.385825 CGGAGCAAATTATGGTTAGCCTA 58.614 43.478 0.00 0.00 40.59 3.93
748 784 1.934589 TCCGTTCATTATGTGCGGAG 58.065 50.000 21.07 5.48 45.26 4.63
753 789 8.180920 TGTTTGTTGATATCCGTTCATTATGTG 58.819 33.333 0.00 0.00 0.00 3.21
769 805 6.899393 ATGTAGGAACACATGTTTGTTGAT 57.101 33.333 6.44 0.00 39.88 2.57
812 848 2.640826 TGTCGGAGGTAAAAATGGGAGT 59.359 45.455 0.00 0.00 0.00 3.85
906 942 0.324943 CCGGTGGGACAGAGAAACAT 59.675 55.000 0.00 0.00 41.80 2.71
911 947 1.477685 GGTTTCCGGTGGGACAGAGA 61.478 60.000 0.00 0.00 43.74 3.10
924 960 4.499188 CCTTTCTTCTGGTTTTCGGTTTCC 60.499 45.833 0.00 0.00 0.00 3.13
939 975 1.995376 TGTTTGCCCTCCCTTTCTTC 58.005 50.000 0.00 0.00 0.00 2.87
951 992 1.660264 CCCTTTCGCGTTGTTTGCC 60.660 57.895 5.77 0.00 0.00 4.52
965 1008 1.221021 GAACGGAGGCGATTCCCTT 59.779 57.895 0.00 0.00 34.69 3.95
966 1009 2.901042 GAACGGAGGCGATTCCCT 59.099 61.111 0.00 0.00 38.12 4.20
968 1011 1.877165 GACGAACGGAGGCGATTCC 60.877 63.158 0.00 0.00 33.86 3.01
975 1029 2.412112 GGATCGGACGAACGGAGG 59.588 66.667 0.00 0.00 0.00 4.30
993 1047 1.153369 AACCCGTGCCATCTGATCG 60.153 57.895 0.00 0.00 0.00 3.69
1005 1059 2.111043 CAGCTGGACACAACCCGT 59.889 61.111 5.57 0.00 0.00 5.28
1047 1101 1.134965 CGTTTGCACAGTTTTGGGGAA 60.135 47.619 0.00 0.00 36.14 3.97
1053 1107 4.347813 GACATGTACGTTTGCACAGTTTT 58.652 39.130 0.00 0.00 0.00 2.43
1059 1113 3.002862 TGAAAGGACATGTACGTTTGCAC 59.997 43.478 10.75 0.00 0.00 4.57
1072 1126 3.756434 GGTTGGATCGAAATGAAAGGACA 59.244 43.478 0.00 0.00 0.00 4.02
1095 1149 2.027073 GCATGTGAGTTCGGCGTCA 61.027 57.895 6.85 0.00 0.00 4.35
1155 1231 0.322636 TCTCCTCGACCTTCTTCGCT 60.323 55.000 0.00 0.00 38.95 4.93
1186 1262 3.673956 CTGTCGCCGCCATACCCAA 62.674 63.158 0.00 0.00 0.00 4.12
1203 1279 0.536687 TGTCCTTCGTCGTGTCCTCT 60.537 55.000 0.00 0.00 0.00 3.69
1216 1292 0.600255 CAGAACGCCGTCTTGTCCTT 60.600 55.000 0.00 0.00 0.00 3.36
1311 1387 0.975040 ACCTCCGCTTGAGCATCTCT 60.975 55.000 3.65 0.00 42.21 3.10
1344 1420 2.980378 TTTGCAGCACGCGCATCAT 61.980 52.632 5.73 0.00 46.97 2.45
1369 1445 0.763035 GTATGAACCTATGGGCCGGT 59.237 55.000 1.90 0.00 35.63 5.28
1378 1454 5.185442 TGTTGTACATGACGGTATGAACCTA 59.815 40.000 0.00 0.00 44.35 3.08
1379 1455 4.020928 TGTTGTACATGACGGTATGAACCT 60.021 41.667 0.00 0.00 44.35 3.50
1391 1467 5.499935 CCGTTAACGTTTTGTTGTACATGA 58.500 37.500 25.15 0.00 42.01 3.07
1400 1476 0.027848 CACGCCCGTTAACGTTTTGT 59.972 50.000 25.15 15.11 41.32 2.83
1439 1515 2.737830 TCGTTGTCCGACATGGCA 59.262 55.556 1.09 0.00 41.60 4.92
1495 1575 7.693952 ACAAGTAAATGTGTAAGTGTCTGTTG 58.306 34.615 0.00 0.00 30.82 3.33
1497 1577 7.769044 AGAACAAGTAAATGTGTAAGTGTCTGT 59.231 33.333 0.00 0.00 32.81 3.41
1500 1580 8.212495 CGTAGAACAAGTAAATGTGTAAGTGTC 58.788 37.037 0.00 0.00 32.81 3.67
1536 1616 2.799978 GCGAAACCACTGGGAAATTTTG 59.200 45.455 0.00 0.00 38.05 2.44
1545 1625 1.821759 TGGTGTGCGAAACCACTGG 60.822 57.895 1.09 0.00 42.82 4.00
1551 1631 0.306533 ATTGTCGTGGTGTGCGAAAC 59.693 50.000 0.00 0.00 40.19 2.78
1552 1632 1.867166 TATTGTCGTGGTGTGCGAAA 58.133 45.000 0.00 0.00 40.19 3.46
1555 1635 2.158645 TGAAATATTGTCGTGGTGTGCG 59.841 45.455 0.00 0.00 0.00 5.34
1558 1638 3.407698 TGCTGAAATATTGTCGTGGTGT 58.592 40.909 0.00 0.00 0.00 4.16
1570 1650 5.492895 TCCCGTAATCAAACTGCTGAAATA 58.507 37.500 0.00 0.00 0.00 1.40
1583 1663 3.360867 ACAATGGCAATTCCCGTAATCA 58.639 40.909 0.00 0.00 0.00 2.57
1584 1664 4.556699 GCTACAATGGCAATTCCCGTAATC 60.557 45.833 0.00 0.00 0.00 1.75
1588 1668 1.102978 GCTACAATGGCAATTCCCGT 58.897 50.000 0.00 0.00 0.00 5.28
1618 1698 1.207488 AAGGTACCCCATGCTGAGCA 61.207 55.000 10.59 10.59 44.86 4.26
1623 1703 2.776665 AGATGTAAGGTACCCCATGCT 58.223 47.619 8.74 5.81 0.00 3.79
1633 1714 3.097614 ACGAGGCTGTTAGATGTAAGGT 58.902 45.455 0.00 0.00 0.00 3.50
1635 1716 6.978659 TCAATTACGAGGCTGTTAGATGTAAG 59.021 38.462 0.00 0.00 0.00 2.34
1638 1719 5.339008 TCAATTACGAGGCTGTTAGATGT 57.661 39.130 0.00 0.00 0.00 3.06
1644 1725 5.957842 TTGAATTCAATTACGAGGCTGTT 57.042 34.783 16.91 0.00 0.00 3.16
1685 1767 6.390721 GCCTCCTCTTTGATTAAAAGGTTTC 58.609 40.000 9.43 0.00 44.69 2.78
1689 1771 3.701542 GGGCCTCCTCTTTGATTAAAAGG 59.298 47.826 0.84 4.27 44.69 3.11
1693 1775 2.573463 AGGGGCCTCCTCTTTGATTAA 58.427 47.619 0.00 0.00 44.06 1.40
1725 1807 2.751806 GGAAACTTGCATCTTCTCCCTG 59.248 50.000 0.00 0.00 0.00 4.45
1726 1808 2.376518 TGGAAACTTGCATCTTCTCCCT 59.623 45.455 0.00 0.00 0.00 4.20
1746 1831 5.173131 GGCTGTTCGTTCAAAATAGTTGTTG 59.827 40.000 0.00 0.00 0.00 3.33
1748 1833 4.578928 AGGCTGTTCGTTCAAAATAGTTGT 59.421 37.500 0.00 0.00 0.00 3.32
1750 1835 5.560183 CGAAGGCTGTTCGTTCAAAATAGTT 60.560 40.000 12.00 0.00 38.99 2.24
1751 1836 4.084013 CGAAGGCTGTTCGTTCAAAATAGT 60.084 41.667 12.00 0.00 38.99 2.12
1753 1838 4.059511 TCGAAGGCTGTTCGTTCAAAATA 58.940 39.130 17.44 0.00 42.09 1.40
1771 1856 5.147330 ACATACAACTTGGAGATGTCGAA 57.853 39.130 0.00 0.00 33.18 3.71
1773 1858 4.690748 ACAACATACAACTTGGAGATGTCG 59.309 41.667 6.66 0.80 33.18 4.35
1784 1869 6.465439 TCGGATCATAGACAACATACAACT 57.535 37.500 0.00 0.00 0.00 3.16
1786 1871 6.640907 CGAATCGGATCATAGACAACATACAA 59.359 38.462 0.00 0.00 0.00 2.41
1793 1878 3.181480 TGTGCGAATCGGATCATAGACAA 60.181 43.478 4.35 0.00 0.00 3.18
1799 1884 0.870393 GCATGTGCGAATCGGATCAT 59.130 50.000 4.35 5.66 0.00 2.45
1809 1894 0.888285 TGTGTTCATGGCATGTGCGA 60.888 50.000 25.62 4.90 43.26 5.10
1821 1906 2.535012 TGCCGTATTGAGTGTGTTCA 57.465 45.000 0.00 0.00 0.00 3.18
1845 1930 2.159819 CTAGTGTCCGTGTGCTGCCT 62.160 60.000 0.00 0.00 0.00 4.75
1852 1937 0.249741 GTTGCCACTAGTGTCCGTGT 60.250 55.000 21.18 0.00 0.00 4.49
1853 1938 0.033504 AGTTGCCACTAGTGTCCGTG 59.966 55.000 21.18 6.90 0.00 4.94
1854 1939 0.317479 GAGTTGCCACTAGTGTCCGT 59.683 55.000 21.18 2.13 31.22 4.69
1855 1940 0.317160 TGAGTTGCCACTAGTGTCCG 59.683 55.000 21.18 7.63 31.22 4.79
1856 1941 1.344763 AGTGAGTTGCCACTAGTGTCC 59.655 52.381 21.18 12.18 44.82 4.02
1857 1942 2.802816 CAAGTGAGTTGCCACTAGTGTC 59.197 50.000 21.18 9.74 45.82 3.67
1858 1943 2.170607 ACAAGTGAGTTGCCACTAGTGT 59.829 45.455 21.18 2.17 45.82 3.55
1859 1944 2.545526 CACAAGTGAGTTGCCACTAGTG 59.454 50.000 16.34 16.34 45.82 2.74
1860 1945 2.170607 ACACAAGTGAGTTGCCACTAGT 59.829 45.455 7.28 0.00 45.82 2.57
1861 1946 2.802816 GACACAAGTGAGTTGCCACTAG 59.197 50.000 7.28 0.00 45.82 2.57
1862 1947 2.434336 AGACACAAGTGAGTTGCCACTA 59.566 45.455 7.28 0.00 45.82 2.74
1864 1949 1.599542 GAGACACAAGTGAGTTGCCAC 59.400 52.381 7.28 0.00 40.15 5.01
1865 1950 1.806247 CGAGACACAAGTGAGTTGCCA 60.806 52.381 7.28 0.00 40.15 4.92
1866 1951 0.861837 CGAGACACAAGTGAGTTGCC 59.138 55.000 7.28 0.00 40.15 4.52
1867 1952 1.523095 GTCGAGACACAAGTGAGTTGC 59.477 52.381 7.28 0.00 40.15 4.17
1868 1953 3.085443 AGTCGAGACACAAGTGAGTTG 57.915 47.619 7.28 0.00 42.48 3.16
1869 1954 3.802948 AAGTCGAGACACAAGTGAGTT 57.197 42.857 7.28 0.00 0.00 3.01
1870 1955 3.448686 CAAAGTCGAGACACAAGTGAGT 58.551 45.455 7.28 0.00 0.00 3.41
1871 1956 2.219674 GCAAAGTCGAGACACAAGTGAG 59.780 50.000 7.28 0.00 0.00 3.51
1872 1957 2.201732 GCAAAGTCGAGACACAAGTGA 58.798 47.619 7.28 0.00 0.00 3.41
1873 1958 1.933181 TGCAAAGTCGAGACACAAGTG 59.067 47.619 5.99 0.00 0.00 3.16
1874 1959 2.309528 TGCAAAGTCGAGACACAAGT 57.690 45.000 5.99 0.00 0.00 3.16
1875 1960 2.286418 GGTTGCAAAGTCGAGACACAAG 60.286 50.000 0.00 0.00 0.00 3.16
1876 1961 1.668751 GGTTGCAAAGTCGAGACACAA 59.331 47.619 0.00 2.22 0.00 3.33
1877 1962 1.295792 GGTTGCAAAGTCGAGACACA 58.704 50.000 0.00 0.00 0.00 3.72
1878 1963 0.586802 GGGTTGCAAAGTCGAGACAC 59.413 55.000 0.00 0.00 0.00 3.67
1879 1964 0.179234 TGGGTTGCAAAGTCGAGACA 59.821 50.000 0.00 0.00 0.00 3.41
1880 1965 0.586802 GTGGGTTGCAAAGTCGAGAC 59.413 55.000 0.00 0.00 0.00 3.36
1881 1966 0.468226 AGTGGGTTGCAAAGTCGAGA 59.532 50.000 0.00 0.00 0.00 4.04
1882 1967 0.588252 CAGTGGGTTGCAAAGTCGAG 59.412 55.000 0.00 0.00 0.00 4.04
1883 1968 0.107410 ACAGTGGGTTGCAAAGTCGA 60.107 50.000 0.00 0.00 0.00 4.20
1884 1969 0.307760 GACAGTGGGTTGCAAAGTCG 59.692 55.000 0.00 0.00 0.00 4.18
1885 1970 1.388547 TGACAGTGGGTTGCAAAGTC 58.611 50.000 0.00 3.78 0.00 3.01
1886 1971 1.682854 CATGACAGTGGGTTGCAAAGT 59.317 47.619 0.00 0.00 0.00 2.66
1887 1972 1.955778 TCATGACAGTGGGTTGCAAAG 59.044 47.619 0.00 0.00 0.00 2.77
1888 1973 1.680735 GTCATGACAGTGGGTTGCAAA 59.319 47.619 21.07 0.00 0.00 3.68
1889 1974 1.317613 GTCATGACAGTGGGTTGCAA 58.682 50.000 21.07 0.00 0.00 4.08
1890 1975 0.537143 GGTCATGACAGTGGGTTGCA 60.537 55.000 26.47 0.00 0.00 4.08
1891 1976 1.577328 CGGTCATGACAGTGGGTTGC 61.577 60.000 26.47 5.61 0.00 4.17
1892 1977 0.250295 ACGGTCATGACAGTGGGTTG 60.250 55.000 27.53 9.26 38.28 3.77
1893 1978 0.472471 AACGGTCATGACAGTGGGTT 59.528 50.000 28.52 18.48 39.57 4.11
1894 1979 0.472471 AAACGGTCATGACAGTGGGT 59.528 50.000 28.52 16.00 39.57 4.51
1895 1980 1.156736 GAAACGGTCATGACAGTGGG 58.843 55.000 28.52 13.71 39.57 4.61
1896 1981 1.156736 GGAAACGGTCATGACAGTGG 58.843 55.000 28.52 15.93 39.57 4.00
1897 1982 1.877637 TGGAAACGGTCATGACAGTG 58.122 50.000 28.52 18.68 39.57 3.66
1898 1983 2.494059 CTTGGAAACGGTCATGACAGT 58.506 47.619 26.47 25.03 41.34 3.55
1899 1984 1.197721 GCTTGGAAACGGTCATGACAG 59.802 52.381 26.47 24.35 0.00 3.51
1900 1985 1.234821 GCTTGGAAACGGTCATGACA 58.765 50.000 26.47 1.84 0.00 3.58
1901 1986 0.521735 GGCTTGGAAACGGTCATGAC 59.478 55.000 17.91 17.91 0.00 3.06
1902 1987 0.608035 GGGCTTGGAAACGGTCATGA 60.608 55.000 0.00 0.00 0.00 3.07
1903 1988 1.883021 GGGCTTGGAAACGGTCATG 59.117 57.895 0.00 0.00 0.00 3.07
1904 1989 1.674322 CGGGCTTGGAAACGGTCAT 60.674 57.895 0.00 0.00 0.00 3.06
1905 1990 2.281208 CGGGCTTGGAAACGGTCA 60.281 61.111 0.00 0.00 0.00 4.02
1906 1991 3.733960 GCGGGCTTGGAAACGGTC 61.734 66.667 0.00 0.00 0.00 4.79
1907 1992 4.572571 TGCGGGCTTGGAAACGGT 62.573 61.111 0.00 0.00 0.00 4.83
1908 1993 3.267597 CTTGCGGGCTTGGAAACGG 62.268 63.158 0.00 0.00 0.00 4.44
1909 1994 2.255252 CTTGCGGGCTTGGAAACG 59.745 61.111 0.00 0.00 0.00 3.60
1910 1995 1.007387 CACTTGCGGGCTTGGAAAC 60.007 57.895 0.00 0.00 0.00 2.78
1911 1996 1.040339 AACACTTGCGGGCTTGGAAA 61.040 50.000 0.00 0.00 0.00 3.13
1912 1997 1.040339 AAACACTTGCGGGCTTGGAA 61.040 50.000 0.00 0.00 0.00 3.53
1913 1998 1.452145 GAAACACTTGCGGGCTTGGA 61.452 55.000 0.00 0.00 0.00 3.53
1914 1999 1.007387 GAAACACTTGCGGGCTTGG 60.007 57.895 0.00 0.00 0.00 3.61
1915 2000 0.102120 TTGAAACACTTGCGGGCTTG 59.898 50.000 0.00 0.00 0.00 4.01
1916 2001 0.102300 GTTGAAACACTTGCGGGCTT 59.898 50.000 0.00 0.00 0.00 4.35
1917 2002 1.733526 GTTGAAACACTTGCGGGCT 59.266 52.632 0.00 0.00 0.00 5.19
1918 2003 1.299850 GGTTGAAACACTTGCGGGC 60.300 57.895 0.00 0.00 0.00 6.13
1919 2004 0.248866 GTGGTTGAAACACTTGCGGG 60.249 55.000 6.03 0.00 35.98 6.13
1920 2005 0.248866 GGTGGTTGAAACACTTGCGG 60.249 55.000 13.64 0.00 38.83 5.69
1921 2006 0.591236 CGGTGGTTGAAACACTTGCG 60.591 55.000 13.64 4.73 38.83 4.85
1922 2007 0.736053 TCGGTGGTTGAAACACTTGC 59.264 50.000 13.64 0.00 38.83 4.01
1923 2008 2.478879 GGTTCGGTGGTTGAAACACTTG 60.479 50.000 13.64 6.57 38.83 3.16
1924 2009 1.746787 GGTTCGGTGGTTGAAACACTT 59.253 47.619 13.64 0.00 38.83 3.16
1925 2010 1.064979 AGGTTCGGTGGTTGAAACACT 60.065 47.619 13.64 0.00 38.83 3.55
1926 2011 1.385528 AGGTTCGGTGGTTGAAACAC 58.614 50.000 4.44 4.44 35.47 3.32
1927 2012 2.131776 AAGGTTCGGTGGTTGAAACA 57.868 45.000 0.00 0.00 35.47 2.83
1928 2013 3.513680 AAAAGGTTCGGTGGTTGAAAC 57.486 42.857 0.00 0.00 33.17 2.78
1947 2032 3.634910 GCCTGAACCTGTTAGGACAAAAA 59.365 43.478 1.13 0.00 37.67 1.94
1948 2033 3.219281 GCCTGAACCTGTTAGGACAAAA 58.781 45.455 1.13 0.00 37.67 2.44
1949 2034 2.173782 TGCCTGAACCTGTTAGGACAAA 59.826 45.455 1.13 0.00 37.67 2.83
1950 2035 1.771854 TGCCTGAACCTGTTAGGACAA 59.228 47.619 1.13 0.00 37.67 3.18
1951 2036 1.429930 TGCCTGAACCTGTTAGGACA 58.570 50.000 1.13 1.35 37.67 4.02
1952 2037 2.561478 TTGCCTGAACCTGTTAGGAC 57.439 50.000 1.13 0.00 37.67 3.85
1953 2038 2.375174 ACATTGCCTGAACCTGTTAGGA 59.625 45.455 1.13 0.00 37.67 2.94
1954 2039 2.795329 ACATTGCCTGAACCTGTTAGG 58.205 47.619 0.00 0.00 42.49 2.69
1955 2040 4.613622 CGAAACATTGCCTGAACCTGTTAG 60.614 45.833 0.00 0.00 30.33 2.34
1956 2041 3.252215 CGAAACATTGCCTGAACCTGTTA 59.748 43.478 0.00 0.00 30.33 2.41
1957 2042 2.034558 CGAAACATTGCCTGAACCTGTT 59.965 45.455 0.00 0.00 0.00 3.16
1958 2043 1.608590 CGAAACATTGCCTGAACCTGT 59.391 47.619 0.00 0.00 0.00 4.00
1959 2044 1.879380 TCGAAACATTGCCTGAACCTG 59.121 47.619 0.00 0.00 0.00 4.00
1960 2045 2.154462 CTCGAAACATTGCCTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
1961 2046 2.151202 TCTCGAAACATTGCCTGAACC 58.849 47.619 0.00 0.00 0.00 3.62
1962 2047 3.896648 TTCTCGAAACATTGCCTGAAC 57.103 42.857 0.00 0.00 0.00 3.18
1963 2048 3.820467 ACATTCTCGAAACATTGCCTGAA 59.180 39.130 0.00 0.00 0.00 3.02
1964 2049 3.411446 ACATTCTCGAAACATTGCCTGA 58.589 40.909 0.00 0.00 0.00 3.86
1965 2050 3.837213 ACATTCTCGAAACATTGCCTG 57.163 42.857 0.00 0.00 0.00 4.85
1966 2051 5.647658 TGAATACATTCTCGAAACATTGCCT 59.352 36.000 3.76 0.00 37.67 4.75
1967 2052 5.879237 TGAATACATTCTCGAAACATTGCC 58.121 37.500 3.76 0.00 37.67 4.52
1968 2053 7.975866 AATGAATACATTCTCGAAACATTGC 57.024 32.000 3.76 0.00 42.20 3.56
2000 2085 9.288576 GGGAAAGATCCTTTTCATTCAATTTTT 57.711 29.630 9.04 0.00 45.77 1.94
2001 2086 8.663167 AGGGAAAGATCCTTTTCATTCAATTTT 58.337 29.630 9.04 0.00 45.77 1.82
2002 2087 8.211030 AGGGAAAGATCCTTTTCATTCAATTT 57.789 30.769 9.04 0.00 45.77 1.82
2003 2088 7.363268 CGAGGGAAAGATCCTTTTCATTCAATT 60.363 37.037 9.04 0.00 45.77 2.32
2004 2089 6.096001 CGAGGGAAAGATCCTTTTCATTCAAT 59.904 38.462 9.04 0.00 45.77 2.57
2005 2090 5.415701 CGAGGGAAAGATCCTTTTCATTCAA 59.584 40.000 9.04 0.00 45.77 2.69
2006 2091 4.943705 CGAGGGAAAGATCCTTTTCATTCA 59.056 41.667 9.04 0.00 45.77 2.57
2007 2092 5.186198 TCGAGGGAAAGATCCTTTTCATTC 58.814 41.667 9.04 5.55 45.77 2.67
2008 2093 5.179452 TCGAGGGAAAGATCCTTTTCATT 57.821 39.130 9.04 0.00 45.77 2.57
2009 2094 4.844349 TCGAGGGAAAGATCCTTTTCAT 57.156 40.909 9.04 0.00 45.77 2.57
2010 2095 4.844349 ATCGAGGGAAAGATCCTTTTCA 57.156 40.909 9.04 0.00 45.77 2.69
2011 2096 5.648092 TGAAATCGAGGGAAAGATCCTTTTC 59.352 40.000 0.00 0.00 45.77 2.29
2012 2097 5.570320 TGAAATCGAGGGAAAGATCCTTTT 58.430 37.500 0.00 0.00 45.77 2.27
2013 2098 5.179452 TGAAATCGAGGGAAAGATCCTTT 57.821 39.130 0.00 0.00 45.77 3.11
2014 2099 4.844349 TGAAATCGAGGGAAAGATCCTT 57.156 40.909 0.00 0.00 45.77 3.36
2015 2100 5.379706 AATGAAATCGAGGGAAAGATCCT 57.620 39.130 0.00 0.00 45.77 3.24
2016 2101 7.499232 TCTTTAATGAAATCGAGGGAAAGATCC 59.501 37.037 0.00 0.00 45.77 3.36
2017 2102 8.438676 TCTTTAATGAAATCGAGGGAAAGATC 57.561 34.615 0.00 0.00 29.23 2.75
2018 2103 8.807948 TTCTTTAATGAAATCGAGGGAAAGAT 57.192 30.769 1.49 0.00 33.15 2.40
2019 2104 8.512138 GTTTCTTTAATGAAATCGAGGGAAAGA 58.488 33.333 16.78 0.00 38.09 2.52
2020 2105 7.755373 GGTTTCTTTAATGAAATCGAGGGAAAG 59.245 37.037 16.78 0.00 38.09 2.62
2021 2106 7.231722 TGGTTTCTTTAATGAAATCGAGGGAAA 59.768 33.333 16.78 0.15 39.25 3.13
2022 2107 6.717540 TGGTTTCTTTAATGAAATCGAGGGAA 59.282 34.615 16.78 0.73 39.25 3.97
2023 2108 6.242396 TGGTTTCTTTAATGAAATCGAGGGA 58.758 36.000 16.78 1.32 39.25 4.20
2024 2109 6.509418 TGGTTTCTTTAATGAAATCGAGGG 57.491 37.500 16.78 0.00 39.25 4.30
2025 2110 8.986477 ATTTGGTTTCTTTAATGAAATCGAGG 57.014 30.769 16.78 0.00 39.25 4.63
2040 2125 9.277783 GCTGTATGATATGACTATTTGGTTTCT 57.722 33.333 0.00 0.00 0.00 2.52
2041 2126 8.507249 GGCTGTATGATATGACTATTTGGTTTC 58.493 37.037 0.00 0.00 0.00 2.78
2042 2127 7.998383 TGGCTGTATGATATGACTATTTGGTTT 59.002 33.333 0.00 0.00 0.00 3.27
2043 2128 7.517320 TGGCTGTATGATATGACTATTTGGTT 58.483 34.615 0.00 0.00 0.00 3.67
2044 2129 7.078249 TGGCTGTATGATATGACTATTTGGT 57.922 36.000 0.00 0.00 0.00 3.67
2045 2130 7.879677 TCTTGGCTGTATGATATGACTATTTGG 59.120 37.037 0.00 0.00 0.00 3.28
2046 2131 8.715998 GTCTTGGCTGTATGATATGACTATTTG 58.284 37.037 0.00 0.00 0.00 2.32
2047 2132 8.432013 TGTCTTGGCTGTATGATATGACTATTT 58.568 33.333 0.00 0.00 0.00 1.40
2048 2133 7.875041 GTGTCTTGGCTGTATGATATGACTATT 59.125 37.037 0.00 0.00 0.00 1.73
2049 2134 7.015584 TGTGTCTTGGCTGTATGATATGACTAT 59.984 37.037 0.00 0.00 0.00 2.12
2050 2135 6.323739 TGTGTCTTGGCTGTATGATATGACTA 59.676 38.462 0.00 0.00 0.00 2.59
2051 2136 5.129320 TGTGTCTTGGCTGTATGATATGACT 59.871 40.000 0.00 0.00 0.00 3.41
2052 2137 5.359756 TGTGTCTTGGCTGTATGATATGAC 58.640 41.667 0.00 0.00 0.00 3.06
2053 2138 5.612725 TGTGTCTTGGCTGTATGATATGA 57.387 39.130 0.00 0.00 0.00 2.15
2054 2139 6.093909 TGTTTGTGTCTTGGCTGTATGATATG 59.906 38.462 0.00 0.00 0.00 1.78
2055 2140 6.094048 GTGTTTGTGTCTTGGCTGTATGATAT 59.906 38.462 0.00 0.00 0.00 1.63
2056 2141 5.411361 GTGTTTGTGTCTTGGCTGTATGATA 59.589 40.000 0.00 0.00 0.00 2.15
2057 2142 4.216257 GTGTTTGTGTCTTGGCTGTATGAT 59.784 41.667 0.00 0.00 0.00 2.45
2058 2143 3.563808 GTGTTTGTGTCTTGGCTGTATGA 59.436 43.478 0.00 0.00 0.00 2.15
2059 2144 3.304659 GGTGTTTGTGTCTTGGCTGTATG 60.305 47.826 0.00 0.00 0.00 2.39
2060 2145 2.884639 GGTGTTTGTGTCTTGGCTGTAT 59.115 45.455 0.00 0.00 0.00 2.29
2061 2146 2.294074 GGTGTTTGTGTCTTGGCTGTA 58.706 47.619 0.00 0.00 0.00 2.74
2062 2147 1.102978 GGTGTTTGTGTCTTGGCTGT 58.897 50.000 0.00 0.00 0.00 4.40
2063 2148 0.029300 CGGTGTTTGTGTCTTGGCTG 59.971 55.000 0.00 0.00 0.00 4.85
2064 2149 1.724582 GCGGTGTTTGTGTCTTGGCT 61.725 55.000 0.00 0.00 0.00 4.75
2065 2150 1.299089 GCGGTGTTTGTGTCTTGGC 60.299 57.895 0.00 0.00 0.00 4.52
2066 2151 1.588674 TAGCGGTGTTTGTGTCTTGG 58.411 50.000 0.00 0.00 0.00 3.61
2067 2152 2.612212 ACTTAGCGGTGTTTGTGTCTTG 59.388 45.455 0.00 0.00 0.00 3.02
2068 2153 2.914059 ACTTAGCGGTGTTTGTGTCTT 58.086 42.857 0.00 0.00 0.00 3.01
2069 2154 2.614829 ACTTAGCGGTGTTTGTGTCT 57.385 45.000 0.00 0.00 0.00 3.41
2070 2155 3.685836 AAACTTAGCGGTGTTTGTGTC 57.314 42.857 0.00 0.00 35.40 3.67
2071 2156 4.877251 TCTTAAACTTAGCGGTGTTTGTGT 59.123 37.500 11.91 0.00 37.06 3.72
2072 2157 5.412526 TCTTAAACTTAGCGGTGTTTGTG 57.587 39.130 11.91 6.04 37.06 3.33
2073 2158 6.316890 TCTTTCTTAAACTTAGCGGTGTTTGT 59.683 34.615 11.91 0.00 37.06 2.83
2074 2159 6.631636 GTCTTTCTTAAACTTAGCGGTGTTTG 59.368 38.462 11.91 0.00 37.06 2.93
2075 2160 6.316890 TGTCTTTCTTAAACTTAGCGGTGTTT 59.683 34.615 7.98 7.98 39.37 2.83
2076 2161 5.818857 TGTCTTTCTTAAACTTAGCGGTGTT 59.181 36.000 0.00 0.00 0.00 3.32
2077 2162 5.362263 TGTCTTTCTTAAACTTAGCGGTGT 58.638 37.500 0.00 0.00 0.00 4.16
2078 2163 5.917541 TGTCTTTCTTAAACTTAGCGGTG 57.082 39.130 0.00 0.00 0.00 4.94
2079 2164 5.469084 CCTTGTCTTTCTTAAACTTAGCGGT 59.531 40.000 0.00 0.00 0.00 5.68
2080 2165 5.699458 TCCTTGTCTTTCTTAAACTTAGCGG 59.301 40.000 0.00 0.00 0.00 5.52
2081 2166 6.780706 TCCTTGTCTTTCTTAAACTTAGCG 57.219 37.500 0.00 0.00 0.00 4.26
2082 2167 7.530863 CCATCCTTGTCTTTCTTAAACTTAGC 58.469 38.462 0.00 0.00 0.00 3.09
2083 2168 7.174946 TGCCATCCTTGTCTTTCTTAAACTTAG 59.825 37.037 0.00 0.00 0.00 2.18
2084 2169 7.001674 TGCCATCCTTGTCTTTCTTAAACTTA 58.998 34.615 0.00 0.00 0.00 2.24
2085 2170 5.833131 TGCCATCCTTGTCTTTCTTAAACTT 59.167 36.000 0.00 0.00 0.00 2.66
2086 2171 5.385198 TGCCATCCTTGTCTTTCTTAAACT 58.615 37.500 0.00 0.00 0.00 2.66
2087 2172 5.705609 TGCCATCCTTGTCTTTCTTAAAC 57.294 39.130 0.00 0.00 0.00 2.01
2088 2173 5.596361 TGTTGCCATCCTTGTCTTTCTTAAA 59.404 36.000 0.00 0.00 0.00 1.52
2089 2174 5.136828 TGTTGCCATCCTTGTCTTTCTTAA 58.863 37.500 0.00 0.00 0.00 1.85
2090 2175 4.724399 TGTTGCCATCCTTGTCTTTCTTA 58.276 39.130 0.00 0.00 0.00 2.10
2091 2176 3.565307 TGTTGCCATCCTTGTCTTTCTT 58.435 40.909 0.00 0.00 0.00 2.52
2092 2177 3.228188 TGTTGCCATCCTTGTCTTTCT 57.772 42.857 0.00 0.00 0.00 2.52
2093 2178 3.319122 AGTTGTTGCCATCCTTGTCTTTC 59.681 43.478 0.00 0.00 0.00 2.62
2094 2179 3.299503 AGTTGTTGCCATCCTTGTCTTT 58.700 40.909 0.00 0.00 0.00 2.52
2095 2180 2.887152 GAGTTGTTGCCATCCTTGTCTT 59.113 45.455 0.00 0.00 0.00 3.01
2096 2181 2.508526 GAGTTGTTGCCATCCTTGTCT 58.491 47.619 0.00 0.00 0.00 3.41
2097 2182 1.541588 GGAGTTGTTGCCATCCTTGTC 59.458 52.381 0.00 0.00 0.00 3.18
2098 2183 1.620822 GGAGTTGTTGCCATCCTTGT 58.379 50.000 0.00 0.00 0.00 3.16
2099 2184 0.890683 GGGAGTTGTTGCCATCCTTG 59.109 55.000 0.00 0.00 37.22 3.61
2100 2185 0.482446 TGGGAGTTGTTGCCATCCTT 59.518 50.000 0.00 0.00 43.15 3.36
2101 2186 2.163454 TGGGAGTTGTTGCCATCCT 58.837 52.632 0.00 0.00 43.15 3.24
2102 2187 4.841441 TGGGAGTTGTTGCCATCC 57.159 55.556 0.00 0.00 43.15 3.51
2105 2190 1.205893 GTGTTTTGGGAGTTGTTGCCA 59.794 47.619 0.00 0.00 46.81 4.92
2106 2191 1.801025 CGTGTTTTGGGAGTTGTTGCC 60.801 52.381 0.00 0.00 37.90 4.52
2107 2192 1.555477 CGTGTTTTGGGAGTTGTTGC 58.445 50.000 0.00 0.00 0.00 4.17
2108 2193 1.135257 TGCGTGTTTTGGGAGTTGTTG 60.135 47.619 0.00 0.00 0.00 3.33
2109 2194 1.135228 GTGCGTGTTTTGGGAGTTGTT 60.135 47.619 0.00 0.00 0.00 2.83
2110 2195 0.454196 GTGCGTGTTTTGGGAGTTGT 59.546 50.000 0.00 0.00 0.00 3.32
2111 2196 0.453793 TGTGCGTGTTTTGGGAGTTG 59.546 50.000 0.00 0.00 0.00 3.16
2112 2197 0.454196 GTGTGCGTGTTTTGGGAGTT 59.546 50.000 0.00 0.00 0.00 3.01
2113 2198 0.678366 TGTGTGCGTGTTTTGGGAGT 60.678 50.000 0.00 0.00 0.00 3.85
2114 2199 0.248458 GTGTGTGCGTGTTTTGGGAG 60.248 55.000 0.00 0.00 0.00 4.30
2115 2200 1.658686 GGTGTGTGCGTGTTTTGGGA 61.659 55.000 0.00 0.00 0.00 4.37
2116 2201 1.226831 GGTGTGTGCGTGTTTTGGG 60.227 57.895 0.00 0.00 0.00 4.12
2117 2202 1.226831 GGGTGTGTGCGTGTTTTGG 60.227 57.895 0.00 0.00 0.00 3.28
2118 2203 0.248458 GAGGGTGTGTGCGTGTTTTG 60.248 55.000 0.00 0.00 0.00 2.44
2119 2204 0.678366 TGAGGGTGTGTGCGTGTTTT 60.678 50.000 0.00 0.00 0.00 2.43
2120 2205 1.078072 TGAGGGTGTGTGCGTGTTT 60.078 52.632 0.00 0.00 0.00 2.83
2121 2206 1.817941 GTGAGGGTGTGTGCGTGTT 60.818 57.895 0.00 0.00 0.00 3.32
2122 2207 2.203015 GTGAGGGTGTGTGCGTGT 60.203 61.111 0.00 0.00 0.00 4.49
2123 2208 2.203001 TGTGAGGGTGTGTGCGTG 60.203 61.111 0.00 0.00 0.00 5.34
2124 2209 2.203015 GTGTGAGGGTGTGTGCGT 60.203 61.111 0.00 0.00 0.00 5.24
2125 2210 2.972505 GGTGTGAGGGTGTGTGCG 60.973 66.667 0.00 0.00 0.00 5.34
2126 2211 1.893808 CAGGTGTGAGGGTGTGTGC 60.894 63.158 0.00 0.00 0.00 4.57
2127 2212 1.893808 GCAGGTGTGAGGGTGTGTG 60.894 63.158 0.00 0.00 0.00 3.82
2128 2213 2.510906 GCAGGTGTGAGGGTGTGT 59.489 61.111 0.00 0.00 0.00 3.72
2129 2214 2.658679 TTCGCAGGTGTGAGGGTGTG 62.659 60.000 0.00 0.00 35.80 3.82
2130 2215 1.768684 ATTCGCAGGTGTGAGGGTGT 61.769 55.000 0.00 0.00 35.80 4.16
2131 2216 0.249120 TATTCGCAGGTGTGAGGGTG 59.751 55.000 0.00 0.00 35.80 4.61
2132 2217 0.249398 GTATTCGCAGGTGTGAGGGT 59.751 55.000 0.00 0.00 35.80 4.34
2133 2218 0.249120 TGTATTCGCAGGTGTGAGGG 59.751 55.000 0.00 0.00 35.80 4.30
2134 2219 2.002586 CTTGTATTCGCAGGTGTGAGG 58.997 52.381 0.00 0.00 35.80 3.86
2135 2220 2.688507 ACTTGTATTCGCAGGTGTGAG 58.311 47.619 0.00 0.00 35.80 3.51
2136 2221 2.831685 ACTTGTATTCGCAGGTGTGA 57.168 45.000 0.00 0.00 0.00 3.58
2137 2222 4.688879 TCTTTACTTGTATTCGCAGGTGTG 59.311 41.667 0.00 0.00 31.15 3.82
2138 2223 4.890088 TCTTTACTTGTATTCGCAGGTGT 58.110 39.130 0.00 0.00 31.15 4.16
2139 2224 4.330074 CCTCTTTACTTGTATTCGCAGGTG 59.670 45.833 0.00 0.00 31.15 4.00
2140 2225 4.504858 CCTCTTTACTTGTATTCGCAGGT 58.495 43.478 0.00 0.00 33.27 4.00
2141 2226 3.871594 CCCTCTTTACTTGTATTCGCAGG 59.128 47.826 0.00 0.00 0.00 4.85
2142 2227 4.755411 TCCCTCTTTACTTGTATTCGCAG 58.245 43.478 0.00 0.00 0.00 5.18
2143 2228 4.811969 TCCCTCTTTACTTGTATTCGCA 57.188 40.909 0.00 0.00 0.00 5.10
2144 2229 6.128526 GCATATCCCTCTTTACTTGTATTCGC 60.129 42.308 0.00 0.00 0.00 4.70
2145 2230 6.929049 TGCATATCCCTCTTTACTTGTATTCG 59.071 38.462 0.00 0.00 0.00 3.34
2146 2231 8.677148 TTGCATATCCCTCTTTACTTGTATTC 57.323 34.615 0.00 0.00 0.00 1.75
2148 2233 9.950496 CTATTGCATATCCCTCTTTACTTGTAT 57.050 33.333 0.00 0.00 0.00 2.29
2149 2234 9.154632 TCTATTGCATATCCCTCTTTACTTGTA 57.845 33.333 0.00 0.00 0.00 2.41
2150 2235 8.034313 TCTATTGCATATCCCTCTTTACTTGT 57.966 34.615 0.00 0.00 0.00 3.16
2151 2236 8.778358 GTTCTATTGCATATCCCTCTTTACTTG 58.222 37.037 0.00 0.00 0.00 3.16
2152 2237 8.494433 TGTTCTATTGCATATCCCTCTTTACTT 58.506 33.333 0.00 0.00 0.00 2.24
2153 2238 7.934120 GTGTTCTATTGCATATCCCTCTTTACT 59.066 37.037 0.00 0.00 0.00 2.24
2154 2239 7.173390 GGTGTTCTATTGCATATCCCTCTTTAC 59.827 40.741 0.00 0.00 0.00 2.01
2155 2240 7.224297 GGTGTTCTATTGCATATCCCTCTTTA 58.776 38.462 0.00 0.00 0.00 1.85
2156 2241 6.064717 GGTGTTCTATTGCATATCCCTCTTT 58.935 40.000 0.00 0.00 0.00 2.52
2157 2242 5.456763 GGGTGTTCTATTGCATATCCCTCTT 60.457 44.000 0.00 0.00 0.00 2.85
2158 2243 4.042187 GGGTGTTCTATTGCATATCCCTCT 59.958 45.833 0.00 0.00 0.00 3.69
2159 2244 4.202461 TGGGTGTTCTATTGCATATCCCTC 60.202 45.833 0.00 0.00 34.14 4.30
2160 2245 3.721575 TGGGTGTTCTATTGCATATCCCT 59.278 43.478 0.00 0.00 34.14 4.20
2161 2246 4.098914 TGGGTGTTCTATTGCATATCCC 57.901 45.455 0.00 0.00 0.00 3.85
2162 2247 4.393062 CGATGGGTGTTCTATTGCATATCC 59.607 45.833 0.00 0.00 0.00 2.59
2163 2248 5.237815 TCGATGGGTGTTCTATTGCATATC 58.762 41.667 0.00 0.00 0.00 1.63
2164 2249 5.227569 TCGATGGGTGTTCTATTGCATAT 57.772 39.130 0.00 0.00 0.00 1.78
2165 2250 4.681074 TCGATGGGTGTTCTATTGCATA 57.319 40.909 0.00 0.00 0.00 3.14
2166 2251 3.558931 TCGATGGGTGTTCTATTGCAT 57.441 42.857 0.00 0.00 0.00 3.96
2167 2252 3.342377 TTCGATGGGTGTTCTATTGCA 57.658 42.857 0.00 0.00 0.00 4.08
2168 2253 3.689649 AGTTTCGATGGGTGTTCTATTGC 59.310 43.478 0.00 0.00 0.00 3.56
2169 2254 6.338146 TCTAGTTTCGATGGGTGTTCTATTG 58.662 40.000 0.00 0.00 0.00 1.90
2170 2255 6.540438 TCTAGTTTCGATGGGTGTTCTATT 57.460 37.500 0.00 0.00 0.00 1.73
2171 2256 6.323996 TGATCTAGTTTCGATGGGTGTTCTAT 59.676 38.462 0.00 0.00 0.00 1.98
2172 2257 5.655090 TGATCTAGTTTCGATGGGTGTTCTA 59.345 40.000 0.00 0.00 0.00 2.10
2173 2258 4.466370 TGATCTAGTTTCGATGGGTGTTCT 59.534 41.667 0.00 0.00 0.00 3.01
2174 2259 4.755411 TGATCTAGTTTCGATGGGTGTTC 58.245 43.478 0.00 0.00 0.00 3.18
2175 2260 4.819105 TGATCTAGTTTCGATGGGTGTT 57.181 40.909 0.00 0.00 0.00 3.32
2176 2261 4.819105 TTGATCTAGTTTCGATGGGTGT 57.181 40.909 0.00 0.00 0.00 4.16
2177 2262 5.445939 CGTTTTGATCTAGTTTCGATGGGTG 60.446 44.000 0.00 0.00 0.00 4.61
2178 2263 4.630069 CGTTTTGATCTAGTTTCGATGGGT 59.370 41.667 0.00 0.00 0.00 4.51
2179 2264 4.494199 GCGTTTTGATCTAGTTTCGATGGG 60.494 45.833 0.00 0.00 0.00 4.00
2180 2265 4.578601 GCGTTTTGATCTAGTTTCGATGG 58.421 43.478 0.00 0.00 0.00 3.51
2181 2266 4.255999 CGCGTTTTGATCTAGTTTCGATG 58.744 43.478 0.00 0.00 0.00 3.84
2182 2267 3.241995 GCGCGTTTTGATCTAGTTTCGAT 60.242 43.478 8.43 0.00 0.00 3.59
2183 2268 2.091588 GCGCGTTTTGATCTAGTTTCGA 59.908 45.455 8.43 0.00 0.00 3.71
2184 2269 2.092211 AGCGCGTTTTGATCTAGTTTCG 59.908 45.455 8.43 0.00 0.00 3.46
2185 2270 3.483738 GGAGCGCGTTTTGATCTAGTTTC 60.484 47.826 8.43 0.00 0.00 2.78
2186 2271 2.415512 GGAGCGCGTTTTGATCTAGTTT 59.584 45.455 8.43 0.00 0.00 2.66
2187 2272 2.000447 GGAGCGCGTTTTGATCTAGTT 59.000 47.619 8.43 0.00 0.00 2.24
2188 2273 1.067142 TGGAGCGCGTTTTGATCTAGT 60.067 47.619 8.43 0.00 0.00 2.57
2189 2274 1.640428 TGGAGCGCGTTTTGATCTAG 58.360 50.000 8.43 0.00 0.00 2.43
2190 2275 2.087501 TTGGAGCGCGTTTTGATCTA 57.912 45.000 8.43 0.00 0.00 1.98
2191 2276 1.234821 TTTGGAGCGCGTTTTGATCT 58.765 45.000 8.43 0.00 0.00 2.75
2192 2277 1.913403 CATTTGGAGCGCGTTTTGATC 59.087 47.619 8.43 0.00 0.00 2.92
2193 2278 1.981254 CATTTGGAGCGCGTTTTGAT 58.019 45.000 8.43 0.00 0.00 2.57
2194 2279 0.662970 GCATTTGGAGCGCGTTTTGA 60.663 50.000 8.43 0.00 0.00 2.69
2195 2280 1.774727 GCATTTGGAGCGCGTTTTG 59.225 52.632 8.43 0.00 0.00 2.44
2196 2281 4.243383 GCATTTGGAGCGCGTTTT 57.757 50.000 8.43 0.00 0.00 2.43
2203 2288 2.227865 TGGAGTAAAACGCATTTGGAGC 59.772 45.455 0.00 0.00 32.27 4.70
2204 2289 4.701956 ATGGAGTAAAACGCATTTGGAG 57.298 40.909 0.00 0.00 32.27 3.86
2205 2290 5.461032 AAATGGAGTAAAACGCATTTGGA 57.539 34.783 0.00 0.00 32.27 3.53
2206 2291 5.575218 GGTAAATGGAGTAAAACGCATTTGG 59.425 40.000 0.00 0.00 32.27 3.28
2207 2292 5.575218 GGGTAAATGGAGTAAAACGCATTTG 59.425 40.000 0.00 0.00 32.27 2.32
2208 2293 5.336929 GGGGTAAATGGAGTAAAACGCATTT 60.337 40.000 0.00 0.00 34.92 2.32
2209 2294 4.158949 GGGGTAAATGGAGTAAAACGCATT 59.841 41.667 0.00 0.00 0.00 3.56
2210 2295 3.697542 GGGGTAAATGGAGTAAAACGCAT 59.302 43.478 0.00 0.00 0.00 4.73
2211 2296 3.083293 GGGGTAAATGGAGTAAAACGCA 58.917 45.455 0.00 0.00 0.00 5.24
2212 2297 2.424601 GGGGGTAAATGGAGTAAAACGC 59.575 50.000 0.00 0.00 0.00 4.84
2230 2315 3.252284 ACACAGTGGCTGAGGGGG 61.252 66.667 5.31 0.00 35.18 5.40
2231 2316 2.033141 CACACAGTGGCTGAGGGG 59.967 66.667 5.31 0.00 35.18 4.79
2232 2317 1.302033 GTCACACAGTGGCTGAGGG 60.302 63.158 5.31 0.00 35.05 4.30
2233 2318 0.602106 CTGTCACACAGTGGCTGAGG 60.602 60.000 5.31 0.00 41.19 3.86
2234 2319 2.910205 CTGTCACACAGTGGCTGAG 58.090 57.895 5.31 0.00 41.19 3.35
2243 2328 1.742831 GGTTGAAACTGCTGTCACACA 59.257 47.619 0.00 0.00 0.00 3.72
2244 2329 1.742831 TGGTTGAAACTGCTGTCACAC 59.257 47.619 0.00 0.00 0.00 3.82
2245 2330 2.121291 TGGTTGAAACTGCTGTCACA 57.879 45.000 0.00 0.00 0.00 3.58
2246 2331 2.880890 AGATGGTTGAAACTGCTGTCAC 59.119 45.455 0.00 0.00 0.00 3.67
2247 2332 3.213206 AGATGGTTGAAACTGCTGTCA 57.787 42.857 0.00 0.00 0.00 3.58
2248 2333 3.057946 GGAAGATGGTTGAAACTGCTGTC 60.058 47.826 0.00 0.00 0.00 3.51
2249 2334 2.887152 GGAAGATGGTTGAAACTGCTGT 59.113 45.455 0.00 0.00 0.00 4.40
2250 2335 2.886523 TGGAAGATGGTTGAAACTGCTG 59.113 45.455 0.00 0.00 0.00 4.41
2251 2336 3.228188 TGGAAGATGGTTGAAACTGCT 57.772 42.857 0.00 0.00 0.00 4.24
2252 2337 4.219288 AGATTGGAAGATGGTTGAAACTGC 59.781 41.667 0.00 0.00 0.00 4.40
2253 2338 5.972107 AGATTGGAAGATGGTTGAAACTG 57.028 39.130 0.00 0.00 0.00 3.16
2254 2339 6.336842 CAAGATTGGAAGATGGTTGAAACT 57.663 37.500 0.00 0.00 0.00 2.66
2269 2354 3.432608 GGCATTTTGGATCCCAAGATTGG 60.433 47.826 9.90 4.53 44.84 3.16
2270 2355 3.432608 GGGCATTTTGGATCCCAAGATTG 60.433 47.826 9.90 5.25 44.84 2.67
2271 2356 2.773661 GGGCATTTTGGATCCCAAGATT 59.226 45.455 9.90 0.00 44.84 2.40
2272 2357 2.293051 TGGGCATTTTGGATCCCAAGAT 60.293 45.455 9.90 1.97 44.84 2.40
2273 2358 1.078490 TGGGCATTTTGGATCCCAAGA 59.922 47.619 9.90 0.00 44.84 3.02
2274 2359 1.570803 TGGGCATTTTGGATCCCAAG 58.429 50.000 9.90 0.00 44.84 3.61
2275 2360 3.803123 TGGGCATTTTGGATCCCAA 57.197 47.368 9.90 0.59 45.14 4.12
2276 2361 0.413037 AGTGGGCATTTTGGATCCCA 59.587 50.000 9.90 0.00 45.87 4.37
2277 2362 1.114627 GAGTGGGCATTTTGGATCCC 58.885 55.000 9.90 0.00 39.22 3.85
2278 2363 1.114627 GGAGTGGGCATTTTGGATCC 58.885 55.000 4.20 4.20 0.00 3.36
2279 2364 1.114627 GGGAGTGGGCATTTTGGATC 58.885 55.000 0.00 0.00 0.00 3.36
2280 2365 0.684153 CGGGAGTGGGCATTTTGGAT 60.684 55.000 0.00 0.00 0.00 3.41
2281 2366 1.304052 CGGGAGTGGGCATTTTGGA 60.304 57.895 0.00 0.00 0.00 3.53
2282 2367 3.005540 GCGGGAGTGGGCATTTTGG 62.006 63.158 0.00 0.00 0.00 3.28
2283 2368 2.573340 GCGGGAGTGGGCATTTTG 59.427 61.111 0.00 0.00 0.00 2.44
2284 2369 2.679996 GGCGGGAGTGGGCATTTT 60.680 61.111 0.00 0.00 0.00 1.82
2292 2377 4.680237 TCAAGCACGGCGGGAGTG 62.680 66.667 16.21 10.15 42.15 3.51
2293 2378 3.469863 TTTCAAGCACGGCGGGAGT 62.470 57.895 16.21 0.00 0.00 3.85
2294 2379 2.668212 TTTCAAGCACGGCGGGAG 60.668 61.111 16.21 0.81 0.00 4.30
2295 2380 2.463589 ATCTTTCAAGCACGGCGGGA 62.464 55.000 16.21 0.00 0.00 5.14
2296 2381 1.586154 AATCTTTCAAGCACGGCGGG 61.586 55.000 13.24 8.95 0.00 6.13
2297 2382 0.240945 AAATCTTTCAAGCACGGCGG 59.759 50.000 13.24 0.66 0.00 6.13
2298 2383 1.069296 TGAAATCTTTCAAGCACGGCG 60.069 47.619 4.80 4.80 43.62 6.46
2299 2384 2.704725 TGAAATCTTTCAAGCACGGC 57.295 45.000 2.94 0.00 43.62 5.68
2307 2392 3.067106 GAGTCGCCAGTGAAATCTTTCA 58.933 45.455 1.28 1.28 44.31 2.69
2308 2393 2.092838 CGAGTCGCCAGTGAAATCTTTC 59.907 50.000 0.00 0.00 37.69 2.62
2309 2394 2.069273 CGAGTCGCCAGTGAAATCTTT 58.931 47.619 0.00 0.00 0.00 2.52
2310 2395 1.272490 TCGAGTCGCCAGTGAAATCTT 59.728 47.619 7.92 0.00 0.00 2.40
2311 2396 0.888619 TCGAGTCGCCAGTGAAATCT 59.111 50.000 7.92 0.00 0.00 2.40
2312 2397 1.855360 GATCGAGTCGCCAGTGAAATC 59.145 52.381 7.92 0.00 0.00 2.17
2313 2398 1.471676 GGATCGAGTCGCCAGTGAAAT 60.472 52.381 7.92 0.00 0.00 2.17
2314 2399 0.108804 GGATCGAGTCGCCAGTGAAA 60.109 55.000 7.92 0.00 0.00 2.69
2315 2400 1.248101 TGGATCGAGTCGCCAGTGAA 61.248 55.000 7.92 0.00 0.00 3.18
2316 2401 1.657751 CTGGATCGAGTCGCCAGTGA 61.658 60.000 23.55 1.86 43.25 3.41
2317 2402 1.226802 CTGGATCGAGTCGCCAGTG 60.227 63.158 23.55 7.32 43.25 3.66
2318 2403 3.201494 CTGGATCGAGTCGCCAGT 58.799 61.111 23.55 5.40 43.25 4.00
2320 2405 3.068064 TGCTGGATCGAGTCGCCA 61.068 61.111 7.92 9.68 0.00 5.69
2321 2406 2.279120 CTGCTGGATCGAGTCGCC 60.279 66.667 7.92 4.84 0.00 5.54
2322 2407 1.153745 AACTGCTGGATCGAGTCGC 60.154 57.895 7.92 0.00 0.00 5.19
2323 2408 0.109086 ACAACTGCTGGATCGAGTCG 60.109 55.000 6.09 6.09 0.00 4.18
2324 2409 1.354040 CACAACTGCTGGATCGAGTC 58.646 55.000 6.60 0.00 0.00 3.36
2325 2410 0.671781 GCACAACTGCTGGATCGAGT 60.672 55.000 6.60 0.00 40.63 4.18
2326 2411 1.690283 CGCACAACTGCTGGATCGAG 61.690 60.000 0.00 0.00 41.77 4.04
2327 2412 1.737735 CGCACAACTGCTGGATCGA 60.738 57.895 0.00 0.00 41.77 3.59
2328 2413 2.780643 CGCACAACTGCTGGATCG 59.219 61.111 0.00 0.00 41.77 3.69
2329 2414 2.482374 GCGCACAACTGCTGGATC 59.518 61.111 0.30 0.00 41.77 3.36
2330 2415 3.058160 GGCGCACAACTGCTGGAT 61.058 61.111 10.83 0.00 41.77 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.