Multiple sequence alignment - TraesCS1B01G242600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G242600 chr1B 100.000 2956 0 0 1 2956 430348753 430345798 0.000000e+00 5459.0
1 TraesCS1B01G242600 chr1B 89.035 912 67 7 2076 2956 589761555 589762464 0.000000e+00 1099.0
2 TraesCS1B01G242600 chr1B 85.288 1006 86 23 1986 2956 11853423 11852445 0.000000e+00 981.0
3 TraesCS1B01G242600 chr1B 86.957 460 30 7 439 875 430453019 430452567 9.520000e-135 490.0
4 TraesCS1B01G242600 chr1B 93.103 261 14 4 83 341 558151860 558151602 2.150000e-101 379.0
5 TraesCS1B01G242600 chr1B 87.727 220 25 2 1953 2171 625567289 625567071 3.780000e-64 255.0
6 TraesCS1B01G242600 chr1A 89.272 1510 61 27 439 1909 399593368 399591921 0.000000e+00 1797.0
7 TraesCS1B01G242600 chr1A 91.346 104 9 0 330 433 52965191 52965088 3.070000e-30 143.0
8 TraesCS1B01G242600 chr1A 93.333 45 2 1 1918 1961 298655026 298654982 6.840000e-07 65.8
9 TraesCS1B01G242600 chr1D 90.985 1309 56 20 605 1895 318479326 318478062 0.000000e+00 1707.0
10 TraesCS1B01G242600 chr1D 91.096 146 10 1 462 607 318479859 318479717 8.360000e-46 195.0
11 TraesCS1B01G242600 chr1D 97.087 103 3 0 1 103 124674977 124675079 1.090000e-39 174.0
12 TraesCS1B01G242600 chr1D 91.262 103 9 0 330 432 336545051 336544949 1.100000e-29 141.0
13 TraesCS1B01G242600 chr1D 91.262 103 9 0 330 432 433818316 433818214 1.100000e-29 141.0
14 TraesCS1B01G242600 chr4B 89.041 1022 80 13 1954 2956 67500610 67501618 0.000000e+00 1238.0
15 TraesCS1B01G242600 chr4B 87.106 1016 86 11 1953 2928 657250675 657249665 0.000000e+00 1109.0
16 TraesCS1B01G242600 chr4B 84.857 1017 111 25 1953 2956 300934303 300933317 0.000000e+00 985.0
17 TraesCS1B01G242600 chr5B 88.654 1040 75 10 1957 2956 641414495 641415531 0.000000e+00 1227.0
18 TraesCS1B01G242600 chr5B 88.063 888 80 11 2075 2956 5416607 5415740 0.000000e+00 1029.0
19 TraesCS1B01G242600 chr5B 84.244 787 103 8 2154 2921 604595528 604596312 0.000000e+00 747.0
20 TraesCS1B01G242600 chr5B 84.688 640 49 17 1950 2562 356340650 356340033 7.050000e-166 593.0
21 TraesCS1B01G242600 chr5B 93.103 261 14 4 83 341 334739018 334739276 2.150000e-101 379.0
22 TraesCS1B01G242600 chr5B 93.103 261 14 4 83 341 646869834 646870092 2.150000e-101 379.0
23 TraesCS1B01G242600 chr3B 87.609 1033 96 9 1952 2956 18487754 18488782 0.000000e+00 1170.0
24 TraesCS1B01G242600 chr3B 83.877 1011 80 19 1976 2937 5841904 5842880 0.000000e+00 887.0
25 TraesCS1B01G242600 chr3B 81.449 566 47 15 1957 2466 9648552 9647989 7.630000e-111 411.0
26 TraesCS1B01G242600 chr7B 86.982 1037 97 18 1953 2956 84206437 84205406 0.000000e+00 1133.0
27 TraesCS1B01G242600 chr7B 86.925 979 77 12 2005 2949 114505968 114506929 0.000000e+00 1051.0
28 TraesCS1B01G242600 chr7B 82.014 556 71 18 2081 2617 125194879 125195424 2.090000e-121 446.0
29 TraesCS1B01G242600 chr4A 87.044 1042 75 11 1957 2956 739514224 739513201 0.000000e+00 1122.0
30 TraesCS1B01G242600 chr4A 91.667 48 3 1 1915 1961 246002744 246002697 6.840000e-07 65.8
31 TraesCS1B01G242600 chr2B 85.769 1040 105 10 1957 2956 5978808 5979844 0.000000e+00 1061.0
32 TraesCS1B01G242600 chr2B 87.798 713 75 3 2255 2956 667949107 667948396 0.000000e+00 824.0
33 TraesCS1B01G242600 chr2B 83.700 546 64 14 1955 2496 494376577 494377101 2.650000e-135 492.0
34 TraesCS1B01G242600 chr2B 88.450 329 29 5 5 331 107221079 107221400 3.570000e-104 388.0
35 TraesCS1B01G242600 chr2B 93.750 256 13 3 81 335 181755043 181755296 5.980000e-102 381.0
36 TraesCS1B01G242600 chr2B 92.241 116 9 0 1 116 10376886 10377001 6.550000e-37 165.0
37 TraesCS1B01G242600 chr2B 92.727 110 5 3 330 437 801002513 801002621 3.940000e-34 156.0
38 TraesCS1B01G242600 chr6B 84.863 1024 112 21 1953 2956 674214442 674213442 0.000000e+00 992.0
39 TraesCS1B01G242600 chr6B 86.967 399 35 6 1 390 203994142 203993752 1.630000e-117 433.0
40 TraesCS1B01G242600 chr6B 93.103 261 14 4 83 341 180776467 180776725 2.150000e-101 379.0
41 TraesCS1B01G242600 chr6B 93.103 261 13 5 83 341 605258485 605258742 7.730000e-101 377.0
42 TraesCS1B01G242600 chrUn 94.141 256 12 3 81 335 59805075 59805328 1.290000e-103 387.0
43 TraesCS1B01G242600 chrUn 91.525 118 8 1 1 116 291357843 291357726 8.480000e-36 161.0
44 TraesCS1B01G242600 chrUn 91.525 118 8 1 1 116 336928508 336928391 8.480000e-36 161.0
45 TraesCS1B01G242600 chrUn 88.034 117 12 2 330 444 24955309 24955193 1.430000e-28 137.0
46 TraesCS1B01G242600 chr5D 96.262 107 4 0 1 107 447626841 447626947 3.030000e-40 176.0
47 TraesCS1B01G242600 chr5D 94.286 35 1 1 1928 1961 408616199 408616165 5.000000e-03 52.8
48 TraesCS1B01G242600 chr3D 92.437 119 8 1 1 118 596680055 596679937 5.070000e-38 169.0
49 TraesCS1B01G242600 chr3A 91.525 118 10 0 1 118 231688914 231688797 2.360000e-36 163.0
50 TraesCS1B01G242600 chr4D 93.269 104 7 0 330 433 41930416 41930519 1.420000e-33 154.0
51 TraesCS1B01G242600 chr4D 90.385 52 3 2 1912 1961 464749935 464749884 1.900000e-07 67.6
52 TraesCS1B01G242600 chr2D 89.565 115 12 0 319 433 644659930 644659816 2.370000e-31 147.0
53 TraesCS1B01G242600 chr2D 91.667 48 3 1 1915 1961 563640236 563640189 6.840000e-07 65.8
54 TraesCS1B01G242600 chr2D 92.308 39 1 2 1918 1955 6995939 6995902 1.000000e-03 54.7
55 TraesCS1B01G242600 chr2A 89.908 109 10 1 330 437 770464996 770464888 3.970000e-29 139.0
56 TraesCS1B01G242600 chr6D 90.385 104 10 0 330 433 17453147 17453250 1.430000e-28 137.0
57 TraesCS1B01G242600 chr7D 92.683 41 3 0 1914 1954 50137578 50137538 3.180000e-05 60.2
58 TraesCS1B01G242600 chr5A 94.737 38 2 0 1918 1955 409313572 409313609 3.180000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G242600 chr1B 430345798 430348753 2955 True 5459 5459 100.0000 1 2956 1 chr1B.!!$R2 2955
1 TraesCS1B01G242600 chr1B 589761555 589762464 909 False 1099 1099 89.0350 2076 2956 1 chr1B.!!$F1 880
2 TraesCS1B01G242600 chr1B 11852445 11853423 978 True 981 981 85.2880 1986 2956 1 chr1B.!!$R1 970
3 TraesCS1B01G242600 chr1A 399591921 399593368 1447 True 1797 1797 89.2720 439 1909 1 chr1A.!!$R3 1470
4 TraesCS1B01G242600 chr1D 318478062 318479859 1797 True 951 1707 91.0405 462 1895 2 chr1D.!!$R3 1433
5 TraesCS1B01G242600 chr4B 67500610 67501618 1008 False 1238 1238 89.0410 1954 2956 1 chr4B.!!$F1 1002
6 TraesCS1B01G242600 chr4B 657249665 657250675 1010 True 1109 1109 87.1060 1953 2928 1 chr4B.!!$R2 975
7 TraesCS1B01G242600 chr4B 300933317 300934303 986 True 985 985 84.8570 1953 2956 1 chr4B.!!$R1 1003
8 TraesCS1B01G242600 chr5B 641414495 641415531 1036 False 1227 1227 88.6540 1957 2956 1 chr5B.!!$F3 999
9 TraesCS1B01G242600 chr5B 5415740 5416607 867 True 1029 1029 88.0630 2075 2956 1 chr5B.!!$R1 881
10 TraesCS1B01G242600 chr5B 604595528 604596312 784 False 747 747 84.2440 2154 2921 1 chr5B.!!$F2 767
11 TraesCS1B01G242600 chr5B 356340033 356340650 617 True 593 593 84.6880 1950 2562 1 chr5B.!!$R2 612
12 TraesCS1B01G242600 chr3B 18487754 18488782 1028 False 1170 1170 87.6090 1952 2956 1 chr3B.!!$F2 1004
13 TraesCS1B01G242600 chr3B 5841904 5842880 976 False 887 887 83.8770 1976 2937 1 chr3B.!!$F1 961
14 TraesCS1B01G242600 chr3B 9647989 9648552 563 True 411 411 81.4490 1957 2466 1 chr3B.!!$R1 509
15 TraesCS1B01G242600 chr7B 84205406 84206437 1031 True 1133 1133 86.9820 1953 2956 1 chr7B.!!$R1 1003
16 TraesCS1B01G242600 chr7B 114505968 114506929 961 False 1051 1051 86.9250 2005 2949 1 chr7B.!!$F1 944
17 TraesCS1B01G242600 chr7B 125194879 125195424 545 False 446 446 82.0140 2081 2617 1 chr7B.!!$F2 536
18 TraesCS1B01G242600 chr4A 739513201 739514224 1023 True 1122 1122 87.0440 1957 2956 1 chr4A.!!$R2 999
19 TraesCS1B01G242600 chr2B 5978808 5979844 1036 False 1061 1061 85.7690 1957 2956 1 chr2B.!!$F1 999
20 TraesCS1B01G242600 chr2B 667948396 667949107 711 True 824 824 87.7980 2255 2956 1 chr2B.!!$R1 701
21 TraesCS1B01G242600 chr2B 494376577 494377101 524 False 492 492 83.7000 1955 2496 1 chr2B.!!$F5 541
22 TraesCS1B01G242600 chr6B 674213442 674214442 1000 True 992 992 84.8630 1953 2956 1 chr6B.!!$R2 1003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.039618 TACTACCTCCGTCCGGGTTT 59.960 55.0 0.0 0.0 37.07 3.27 F
925 1335 0.108138 ACACGCTCCTGCACTAATCC 60.108 55.0 0.0 0.0 39.64 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 2201 0.255033 TCGATCGACAGGAGGGAGAA 59.745 55.0 15.15 0.0 0.0 2.87 R
2851 3454 0.031043 TGTACCACGACGACAACAGG 59.969 55.0 0.00 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.464770 AAAATATGTGTGATAACATGCAACAC 57.535 30.769 8.32 8.32 40.93 3.32
27 28 7.395190 AATATGTGTGATAACATGCAACACT 57.605 32.000 14.68 5.41 40.93 3.55
28 29 5.710513 ATGTGTGATAACATGCAACACTT 57.289 34.783 14.68 7.42 39.32 3.16
29 30 5.107109 TGTGTGATAACATGCAACACTTC 57.893 39.130 14.68 0.79 33.41 3.01
30 31 4.578105 TGTGTGATAACATGCAACACTTCA 59.422 37.500 14.68 3.18 33.41 3.02
31 32 5.241285 TGTGTGATAACATGCAACACTTCAT 59.759 36.000 14.68 0.00 33.41 2.57
32 33 6.151691 GTGTGATAACATGCAACACTTCATT 58.848 36.000 8.05 0.00 33.41 2.57
33 34 6.642131 GTGTGATAACATGCAACACTTCATTT 59.358 34.615 8.05 0.00 33.41 2.32
34 35 7.807433 GTGTGATAACATGCAACACTTCATTTA 59.193 33.333 8.05 0.00 33.41 1.40
35 36 8.522003 TGTGATAACATGCAACACTTCATTTAT 58.478 29.630 0.00 0.00 33.41 1.40
36 37 9.357652 GTGATAACATGCAACACTTCATTTATT 57.642 29.630 0.00 0.00 0.00 1.40
40 41 6.332630 ACATGCAACACTTCATTTATTAGGC 58.667 36.000 0.00 0.00 0.00 3.93
41 42 6.153340 ACATGCAACACTTCATTTATTAGGCT 59.847 34.615 0.00 0.00 0.00 4.58
42 43 7.339212 ACATGCAACACTTCATTTATTAGGCTA 59.661 33.333 0.00 0.00 0.00 3.93
43 44 7.880160 TGCAACACTTCATTTATTAGGCTAT 57.120 32.000 0.00 0.00 0.00 2.97
44 45 8.972458 TGCAACACTTCATTTATTAGGCTATA 57.028 30.769 0.00 0.00 0.00 1.31
45 46 9.056005 TGCAACACTTCATTTATTAGGCTATAG 57.944 33.333 0.00 0.00 0.00 1.31
46 47 9.273016 GCAACACTTCATTTATTAGGCTATAGA 57.727 33.333 3.21 0.00 0.00 1.98
56 57 9.883142 ATTTATTAGGCTATAGACTCATCTTGC 57.117 33.333 12.64 0.00 36.29 4.01
57 58 5.730296 TTAGGCTATAGACTCATCTTGCC 57.270 43.478 12.64 0.00 41.26 4.52
58 59 3.855668 AGGCTATAGACTCATCTTGCCT 58.144 45.455 0.83 0.00 43.78 4.75
59 60 4.230455 AGGCTATAGACTCATCTTGCCTT 58.770 43.478 0.83 0.00 45.01 4.35
60 61 4.040217 AGGCTATAGACTCATCTTGCCTTG 59.960 45.833 0.83 0.00 45.01 3.61
61 62 4.039730 GGCTATAGACTCATCTTGCCTTGA 59.960 45.833 3.21 0.00 39.50 3.02
62 63 5.279910 GGCTATAGACTCATCTTGCCTTGAT 60.280 44.000 3.21 0.00 39.50 2.57
63 64 6.071108 GGCTATAGACTCATCTTGCCTTGATA 60.071 42.308 3.21 0.00 39.50 2.15
64 65 7.364585 GGCTATAGACTCATCTTGCCTTGATAT 60.365 40.741 3.21 0.00 39.50 1.63
65 66 7.492020 GCTATAGACTCATCTTGCCTTGATATG 59.508 40.741 3.21 0.00 36.29 1.78
66 67 5.627182 AGACTCATCTTGCCTTGATATGT 57.373 39.130 0.00 0.00 0.00 2.29
67 68 5.366460 AGACTCATCTTGCCTTGATATGTG 58.634 41.667 0.00 0.00 0.00 3.21
68 69 5.104610 AGACTCATCTTGCCTTGATATGTGT 60.105 40.000 0.00 0.00 0.00 3.72
69 70 4.880120 ACTCATCTTGCCTTGATATGTGTG 59.120 41.667 0.00 0.00 0.00 3.82
70 71 5.101648 TCATCTTGCCTTGATATGTGTGA 57.898 39.130 0.00 0.00 0.00 3.58
71 72 5.687780 TCATCTTGCCTTGATATGTGTGAT 58.312 37.500 0.00 0.00 0.00 3.06
72 73 5.529800 TCATCTTGCCTTGATATGTGTGATG 59.470 40.000 0.00 0.00 0.00 3.07
73 74 4.847198 TCTTGCCTTGATATGTGTGATGT 58.153 39.130 0.00 0.00 0.00 3.06
74 75 5.255687 TCTTGCCTTGATATGTGTGATGTT 58.744 37.500 0.00 0.00 0.00 2.71
75 76 6.413892 TCTTGCCTTGATATGTGTGATGTTA 58.586 36.000 0.00 0.00 0.00 2.41
76 77 6.316140 TCTTGCCTTGATATGTGTGATGTTAC 59.684 38.462 0.00 0.00 0.00 2.50
77 78 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
78 79 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
79 80 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
80 81 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
81 82 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
82 83 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
83 84 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
89 90 8.803397 TGTGTGATGTTACTCATACTACTAGT 57.197 34.615 0.00 0.00 37.92 2.57
90 91 9.895138 TGTGTGATGTTACTCATACTACTAGTA 57.105 33.333 1.89 1.89 37.92 1.82
102 103 9.927668 CTCATACTACTAGTAACTACTACCTCC 57.072 40.741 3.76 0.00 37.73 4.30
103 104 8.580720 TCATACTACTAGTAACTACTACCTCCG 58.419 40.741 3.76 0.00 37.73 4.63
104 105 6.800072 ACTACTAGTAACTACTACCTCCGT 57.200 41.667 3.76 0.00 37.73 4.69
105 106 6.811954 ACTACTAGTAACTACTACCTCCGTC 58.188 44.000 3.76 0.00 37.73 4.79
106 107 5.029807 ACTAGTAACTACTACCTCCGTCC 57.970 47.826 0.00 0.00 37.73 4.79
107 108 2.911484 AGTAACTACTACCTCCGTCCG 58.089 52.381 0.00 0.00 34.13 4.79
108 109 1.943340 GTAACTACTACCTCCGTCCGG 59.057 57.143 0.00 0.00 0.00 5.14
109 110 0.394899 AACTACTACCTCCGTCCGGG 60.395 60.000 0.00 0.00 35.59 5.73
110 111 1.225704 CTACTACCTCCGTCCGGGT 59.774 63.158 0.00 0.00 39.40 5.28
111 112 0.394899 CTACTACCTCCGTCCGGGTT 60.395 60.000 0.00 0.00 37.07 4.11
112 113 0.039618 TACTACCTCCGTCCGGGTTT 59.960 55.000 0.00 0.00 37.07 3.27
113 114 0.039618 ACTACCTCCGTCCGGGTTTA 59.960 55.000 0.00 0.00 37.07 2.01
114 115 1.342374 ACTACCTCCGTCCGGGTTTAT 60.342 52.381 0.00 0.00 37.07 1.40
115 116 1.758862 CTACCTCCGTCCGGGTTTATT 59.241 52.381 0.00 0.00 37.07 1.40
116 117 0.251073 ACCTCCGTCCGGGTTTATTG 59.749 55.000 0.00 0.00 37.00 1.90
117 118 0.463116 CCTCCGTCCGGGTTTATTGG 60.463 60.000 0.00 0.00 37.00 3.16
118 119 0.251073 CTCCGTCCGGGTTTATTGGT 59.749 55.000 0.00 0.00 37.00 3.67
119 120 0.249955 TCCGTCCGGGTTTATTGGTC 59.750 55.000 0.00 0.00 37.00 4.02
120 121 0.745486 CCGTCCGGGTTTATTGGTCC 60.745 60.000 0.00 0.00 0.00 4.46
121 122 0.745486 CGTCCGGGTTTATTGGTCCC 60.745 60.000 0.00 0.00 37.98 4.46
122 123 0.328926 GTCCGGGTTTATTGGTCCCA 59.671 55.000 0.00 0.00 41.12 4.37
123 124 1.064240 GTCCGGGTTTATTGGTCCCAT 60.064 52.381 0.00 0.00 41.12 4.00
124 125 1.641714 TCCGGGTTTATTGGTCCCATT 59.358 47.619 0.00 0.00 41.12 3.16
125 126 1.754226 CCGGGTTTATTGGTCCCATTG 59.246 52.381 0.00 0.00 41.12 2.82
126 127 2.452505 CGGGTTTATTGGTCCCATTGT 58.547 47.619 0.00 0.00 41.12 2.71
127 128 3.622630 CGGGTTTATTGGTCCCATTGTA 58.377 45.455 0.00 0.00 41.12 2.41
128 129 4.211920 CGGGTTTATTGGTCCCATTGTAT 58.788 43.478 0.00 0.00 41.12 2.29
129 130 4.647399 CGGGTTTATTGGTCCCATTGTATT 59.353 41.667 0.00 0.00 41.12 1.89
130 131 5.128008 CGGGTTTATTGGTCCCATTGTATTT 59.872 40.000 0.00 0.00 41.12 1.40
131 132 6.578944 GGGTTTATTGGTCCCATTGTATTTC 58.421 40.000 0.00 0.00 40.79 2.17
132 133 6.270064 GGTTTATTGGTCCCATTGTATTTCG 58.730 40.000 0.00 0.00 0.00 3.46
133 134 6.127563 GGTTTATTGGTCCCATTGTATTTCGT 60.128 38.462 0.00 0.00 0.00 3.85
134 135 7.067251 GGTTTATTGGTCCCATTGTATTTCGTA 59.933 37.037 0.00 0.00 0.00 3.43
135 136 7.556733 TTATTGGTCCCATTGTATTTCGTAC 57.443 36.000 0.00 0.00 0.00 3.67
136 137 3.876341 TGGTCCCATTGTATTTCGTACC 58.124 45.455 0.00 0.00 32.03 3.34
137 138 3.263681 TGGTCCCATTGTATTTCGTACCA 59.736 43.478 0.00 0.00 32.03 3.25
138 139 4.263374 TGGTCCCATTGTATTTCGTACCAA 60.263 41.667 0.00 0.00 31.83 3.67
139 140 4.701171 GGTCCCATTGTATTTCGTACCAAA 59.299 41.667 0.00 0.00 32.03 3.28
140 141 5.358725 GGTCCCATTGTATTTCGTACCAAAT 59.641 40.000 3.88 3.88 32.03 2.32
141 142 6.127563 GGTCCCATTGTATTTCGTACCAAATT 60.128 38.462 3.71 0.00 32.03 1.82
142 143 7.317390 GTCCCATTGTATTTCGTACCAAATTT 58.683 34.615 3.71 0.00 32.03 1.82
143 144 7.815549 GTCCCATTGTATTTCGTACCAAATTTT 59.184 33.333 3.71 0.00 32.03 1.82
144 145 7.815068 TCCCATTGTATTTCGTACCAAATTTTG 59.185 33.333 3.71 1.99 32.03 2.44
145 146 7.815068 CCCATTGTATTTCGTACCAAATTTTGA 59.185 33.333 10.72 0.00 32.03 2.69
146 147 8.643752 CCATTGTATTTCGTACCAAATTTTGAC 58.356 33.333 10.72 1.27 32.03 3.18
147 148 8.643752 CATTGTATTTCGTACCAAATTTTGACC 58.356 33.333 10.72 0.00 32.03 4.02
148 149 7.273320 TGTATTTCGTACCAAATTTTGACCA 57.727 32.000 10.72 0.00 32.03 4.02
149 150 7.887381 TGTATTTCGTACCAAATTTTGACCAT 58.113 30.769 10.72 0.00 32.03 3.55
150 151 9.011095 TGTATTTCGTACCAAATTTTGACCATA 57.989 29.630 10.72 0.00 32.03 2.74
151 152 9.498307 GTATTTCGTACCAAATTTTGACCATAG 57.502 33.333 10.72 0.00 0.00 2.23
152 153 7.747155 TTTCGTACCAAATTTTGACCATAGA 57.253 32.000 10.72 0.50 0.00 1.98
153 154 7.931578 TTCGTACCAAATTTTGACCATAGAT 57.068 32.000 10.72 0.00 0.00 1.98
154 155 7.931578 TCGTACCAAATTTTGACCATAGATT 57.068 32.000 10.72 0.00 0.00 2.40
155 156 9.451002 TTCGTACCAAATTTTGACCATAGATTA 57.549 29.630 10.72 0.00 0.00 1.75
156 157 9.451002 TCGTACCAAATTTTGACCATAGATTAA 57.549 29.630 10.72 0.00 0.00 1.40
175 176 8.502161 AGATTAAACTAACAAAATGTTCACGC 57.498 30.769 0.00 0.00 40.22 5.34
176 177 8.132362 AGATTAAACTAACAAAATGTTCACGCA 58.868 29.630 0.00 0.00 40.22 5.24
177 178 8.810652 ATTAAACTAACAAAATGTTCACGCAT 57.189 26.923 0.00 0.00 40.22 4.73
178 179 6.509317 AAACTAACAAAATGTTCACGCATG 57.491 33.333 0.00 0.00 40.22 4.06
179 180 5.181690 ACTAACAAAATGTTCACGCATGT 57.818 34.783 0.00 0.00 40.22 3.21
180 181 5.212194 ACTAACAAAATGTTCACGCATGTC 58.788 37.500 0.00 0.00 40.22 3.06
181 182 3.706802 ACAAAATGTTCACGCATGTCA 57.293 38.095 0.00 0.00 0.00 3.58
182 183 3.371168 ACAAAATGTTCACGCATGTCAC 58.629 40.909 0.00 0.00 0.00 3.67
183 184 2.704725 AAATGTTCACGCATGTCACC 57.295 45.000 0.00 0.00 0.00 4.02
184 185 1.603456 AATGTTCACGCATGTCACCA 58.397 45.000 0.00 0.00 0.00 4.17
185 186 1.603456 ATGTTCACGCATGTCACCAA 58.397 45.000 0.00 0.00 0.00 3.67
186 187 1.383523 TGTTCACGCATGTCACCAAA 58.616 45.000 0.00 0.00 0.00 3.28
187 188 1.064803 TGTTCACGCATGTCACCAAAC 59.935 47.619 0.00 0.00 0.00 2.93
188 189 1.064803 GTTCACGCATGTCACCAAACA 59.935 47.619 0.00 0.00 0.00 2.83
189 190 1.603456 TCACGCATGTCACCAAACAT 58.397 45.000 0.00 0.00 40.49 2.71
190 191 1.952990 TCACGCATGTCACCAAACATT 59.047 42.857 0.00 0.00 37.78 2.71
191 192 3.142174 TCACGCATGTCACCAAACATTA 58.858 40.909 0.00 0.00 37.78 1.90
192 193 3.755905 TCACGCATGTCACCAAACATTAT 59.244 39.130 0.00 0.00 37.78 1.28
193 194 4.938226 TCACGCATGTCACCAAACATTATA 59.062 37.500 0.00 0.00 37.78 0.98
194 195 5.588246 TCACGCATGTCACCAAACATTATAT 59.412 36.000 0.00 0.00 37.78 0.86
195 196 6.094742 TCACGCATGTCACCAAACATTATATT 59.905 34.615 0.00 0.00 37.78 1.28
196 197 6.751425 CACGCATGTCACCAAACATTATATTT 59.249 34.615 0.00 0.00 37.78 1.40
197 198 7.275341 CACGCATGTCACCAAACATTATATTTT 59.725 33.333 0.00 0.00 37.78 1.82
198 199 7.816995 ACGCATGTCACCAAACATTATATTTTT 59.183 29.630 0.00 0.00 37.78 1.94
199 200 8.109391 CGCATGTCACCAAACATTATATTTTTG 58.891 33.333 0.00 0.00 37.78 2.44
200 201 9.149225 GCATGTCACCAAACATTATATTTTTGA 57.851 29.630 0.00 0.00 37.78 2.69
242 243 9.793252 ACAAATCCAATGAGATAATTTTTCTCG 57.207 29.630 10.88 0.01 42.08 4.04
245 246 8.737168 ATCCAATGAGATAATTTTTCTCGACA 57.263 30.769 10.88 0.00 42.08 4.35
246 247 8.737168 TCCAATGAGATAATTTTTCTCGACAT 57.263 30.769 10.88 0.15 42.08 3.06
247 248 8.615211 TCCAATGAGATAATTTTTCTCGACATG 58.385 33.333 10.88 0.00 42.08 3.21
248 249 7.377928 CCAATGAGATAATTTTTCTCGACATGC 59.622 37.037 10.88 0.00 42.08 4.06
249 250 6.983474 TGAGATAATTTTTCTCGACATGCA 57.017 33.333 10.88 0.00 42.08 3.96
250 251 7.558161 TGAGATAATTTTTCTCGACATGCAT 57.442 32.000 10.88 0.00 42.08 3.96
251 252 7.412063 TGAGATAATTTTTCTCGACATGCATG 58.588 34.615 25.09 25.09 42.08 4.06
252 253 7.280652 TGAGATAATTTTTCTCGACATGCATGA 59.719 33.333 32.75 10.08 42.08 3.07
253 254 7.988737 AGATAATTTTTCTCGACATGCATGAA 58.011 30.769 32.75 13.45 0.00 2.57
254 255 7.912250 AGATAATTTTTCTCGACATGCATGAAC 59.088 33.333 32.75 22.37 0.00 3.18
255 256 4.827304 TTTTTCTCGACATGCATGAACA 57.173 36.364 32.75 13.88 0.00 3.18
256 257 5.375417 TTTTTCTCGACATGCATGAACAT 57.625 34.783 32.75 10.70 0.00 2.71
257 258 5.375417 TTTTCTCGACATGCATGAACATT 57.625 34.783 32.75 10.28 0.00 2.71
258 259 5.375417 TTTCTCGACATGCATGAACATTT 57.625 34.783 32.75 9.47 0.00 2.32
259 260 5.375417 TTCTCGACATGCATGAACATTTT 57.625 34.783 32.75 8.66 0.00 1.82
260 261 4.725359 TCTCGACATGCATGAACATTTTG 58.275 39.130 32.75 13.08 0.00 2.44
261 262 4.216042 TCTCGACATGCATGAACATTTTGT 59.784 37.500 32.75 8.74 0.00 2.83
262 263 4.869215 TCGACATGCATGAACATTTTGTT 58.131 34.783 32.75 6.24 44.37 2.83
263 264 6.006759 TCGACATGCATGAACATTTTGTTA 57.993 33.333 32.75 0.00 41.28 2.41
264 265 6.085573 TCGACATGCATGAACATTTTGTTAG 58.914 36.000 32.75 7.01 41.28 2.34
265 266 5.858049 CGACATGCATGAACATTTTGTTAGT 59.142 36.000 32.75 4.97 41.28 2.24
266 267 6.363088 CGACATGCATGAACATTTTGTTAGTT 59.637 34.615 32.75 4.26 41.28 2.24
267 268 7.536964 CGACATGCATGAACATTTTGTTAGTTA 59.463 33.333 32.75 0.00 41.28 2.24
268 269 9.190858 GACATGCATGAACATTTTGTTAGTTAA 57.809 29.630 32.75 0.00 41.28 2.01
269 270 9.539825 ACATGCATGAACATTTTGTTAGTTAAA 57.460 25.926 32.75 0.00 41.28 1.52
307 308 9.758651 AATTTGATACAAACTACAAAAAGGACC 57.241 29.630 0.00 0.00 36.19 4.46
308 309 8.528044 TTTGATACAAACTACAAAAAGGACCT 57.472 30.769 0.00 0.00 30.94 3.85
309 310 9.629878 TTTGATACAAACTACAAAAAGGACCTA 57.370 29.630 0.00 0.00 30.94 3.08
310 311 9.802039 TTGATACAAACTACAAAAAGGACCTAT 57.198 29.630 0.00 0.00 0.00 2.57
321 322 8.502105 ACAAAAAGGACCTATAAATTAGGACG 57.498 34.615 5.69 0.00 38.09 4.79
322 323 7.555195 ACAAAAAGGACCTATAAATTAGGACGG 59.445 37.037 5.69 0.00 38.09 4.79
323 324 7.441903 AAAAGGACCTATAAATTAGGACGGA 57.558 36.000 5.69 0.00 38.09 4.69
324 325 6.667558 AAGGACCTATAAATTAGGACGGAG 57.332 41.667 5.69 0.00 38.09 4.63
325 326 5.085219 AGGACCTATAAATTAGGACGGAGG 58.915 45.833 5.69 0.00 38.09 4.30
326 327 4.837298 GGACCTATAAATTAGGACGGAGGT 59.163 45.833 5.69 0.00 38.76 3.85
327 328 6.012745 GGACCTATAAATTAGGACGGAGGTA 58.987 44.000 5.69 0.00 36.20 3.08
328 329 6.152492 GGACCTATAAATTAGGACGGAGGTAG 59.848 46.154 5.69 0.00 36.20 3.18
329 330 6.618501 ACCTATAAATTAGGACGGAGGTAGT 58.381 40.000 5.69 0.00 38.09 2.73
330 331 7.759607 ACCTATAAATTAGGACGGAGGTAGTA 58.240 38.462 5.69 0.00 38.09 1.82
331 332 7.887495 ACCTATAAATTAGGACGGAGGTAGTAG 59.113 40.741 5.69 0.00 38.09 2.57
332 333 4.933505 AAATTAGGACGGAGGTAGTAGC 57.066 45.455 0.00 0.00 0.00 3.58
333 334 3.880168 ATTAGGACGGAGGTAGTAGCT 57.120 47.619 0.36 0.36 0.00 3.32
334 335 4.989875 ATTAGGACGGAGGTAGTAGCTA 57.010 45.455 0.89 0.00 0.00 3.32
335 336 4.989875 TTAGGACGGAGGTAGTAGCTAT 57.010 45.455 0.89 0.00 0.00 2.97
336 337 3.143211 AGGACGGAGGTAGTAGCTATG 57.857 52.381 0.89 0.46 0.00 2.23
337 338 2.442502 AGGACGGAGGTAGTAGCTATGT 59.557 50.000 0.89 3.83 0.00 2.29
338 339 3.117587 AGGACGGAGGTAGTAGCTATGTT 60.118 47.826 0.89 0.00 0.00 2.71
339 340 4.103785 AGGACGGAGGTAGTAGCTATGTTA 59.896 45.833 0.89 0.00 0.00 2.41
340 341 4.215185 GGACGGAGGTAGTAGCTATGTTAC 59.785 50.000 0.89 0.81 0.00 2.50
341 342 4.140536 ACGGAGGTAGTAGCTATGTTACC 58.859 47.826 17.67 17.67 36.62 2.85
342 343 4.139786 CGGAGGTAGTAGCTATGTTACCA 58.860 47.826 23.14 0.00 38.39 3.25
343 344 4.765856 CGGAGGTAGTAGCTATGTTACCAT 59.234 45.833 23.14 13.98 38.39 3.55
344 345 5.243283 CGGAGGTAGTAGCTATGTTACCATT 59.757 44.000 23.14 11.38 38.39 3.16
345 346 6.239232 CGGAGGTAGTAGCTATGTTACCATTT 60.239 42.308 23.14 10.90 38.39 2.32
346 347 7.506971 GGAGGTAGTAGCTATGTTACCATTTT 58.493 38.462 23.14 10.65 38.39 1.82
347 348 7.991460 GGAGGTAGTAGCTATGTTACCATTTTT 59.009 37.037 23.14 10.40 38.39 1.94
348 349 8.959705 AGGTAGTAGCTATGTTACCATTTTTC 57.040 34.615 23.14 0.00 38.39 2.29
349 350 8.769359 AGGTAGTAGCTATGTTACCATTTTTCT 58.231 33.333 23.14 5.72 38.39 2.52
350 351 9.043079 GGTAGTAGCTATGTTACCATTTTTCTC 57.957 37.037 19.29 0.00 36.43 2.87
351 352 9.819267 GTAGTAGCTATGTTACCATTTTTCTCT 57.181 33.333 0.00 0.00 32.29 3.10
352 353 8.950208 AGTAGCTATGTTACCATTTTTCTCTC 57.050 34.615 0.00 0.00 32.29 3.20
353 354 8.763601 AGTAGCTATGTTACCATTTTTCTCTCT 58.236 33.333 0.00 0.00 32.29 3.10
354 355 9.384764 GTAGCTATGTTACCATTTTTCTCTCTT 57.615 33.333 0.00 0.00 32.29 2.85
355 356 8.870075 AGCTATGTTACCATTTTTCTCTCTTT 57.130 30.769 0.00 0.00 32.29 2.52
356 357 8.951243 AGCTATGTTACCATTTTTCTCTCTTTC 58.049 33.333 0.00 0.00 32.29 2.62
357 358 8.951243 GCTATGTTACCATTTTTCTCTCTTTCT 58.049 33.333 0.00 0.00 32.29 2.52
360 361 8.746052 TGTTACCATTTTTCTCTCTTTCTTCA 57.254 30.769 0.00 0.00 0.00 3.02
361 362 9.354673 TGTTACCATTTTTCTCTCTTTCTTCAT 57.645 29.630 0.00 0.00 0.00 2.57
371 372 9.903682 TTTCTCTCTTTCTTCATTTATTGCTTG 57.096 29.630 0.00 0.00 0.00 4.01
372 373 8.627208 TCTCTCTTTCTTCATTTATTGCTTGT 57.373 30.769 0.00 0.00 0.00 3.16
373 374 8.725148 TCTCTCTTTCTTCATTTATTGCTTGTC 58.275 33.333 0.00 0.00 0.00 3.18
374 375 8.394971 TCTCTTTCTTCATTTATTGCTTGTCA 57.605 30.769 0.00 0.00 0.00 3.58
375 376 8.292448 TCTCTTTCTTCATTTATTGCTTGTCAC 58.708 33.333 0.00 0.00 0.00 3.67
376 377 7.939782 TCTTTCTTCATTTATTGCTTGTCACA 58.060 30.769 0.00 0.00 0.00 3.58
377 378 8.579006 TCTTTCTTCATTTATTGCTTGTCACAT 58.421 29.630 0.00 0.00 0.00 3.21
378 379 8.746922 TTTCTTCATTTATTGCTTGTCACATC 57.253 30.769 0.00 0.00 0.00 3.06
379 380 7.451501 TCTTCATTTATTGCTTGTCACATCA 57.548 32.000 0.00 0.00 0.00 3.07
380 381 8.058667 TCTTCATTTATTGCTTGTCACATCAT 57.941 30.769 0.00 0.00 0.00 2.45
381 382 8.525316 TCTTCATTTATTGCTTGTCACATCATT 58.475 29.630 0.00 0.00 0.00 2.57
382 383 8.468720 TTCATTTATTGCTTGTCACATCATTG 57.531 30.769 0.00 0.00 0.00 2.82
383 384 7.828712 TCATTTATTGCTTGTCACATCATTGA 58.171 30.769 0.00 0.00 0.00 2.57
384 385 8.471609 TCATTTATTGCTTGTCACATCATTGAT 58.528 29.630 0.00 0.00 0.00 2.57
385 386 9.093970 CATTTATTGCTTGTCACATCATTGATT 57.906 29.630 0.00 0.00 0.00 2.57
386 387 9.661563 ATTTATTGCTTGTCACATCATTGATTT 57.338 25.926 0.00 0.00 0.00 2.17
387 388 9.491675 TTTATTGCTTGTCACATCATTGATTTT 57.508 25.926 0.00 0.00 0.00 1.82
390 391 8.692110 TTGCTTGTCACATCATTGATTTTATC 57.308 30.769 0.00 0.00 0.00 1.75
391 392 7.828712 TGCTTGTCACATCATTGATTTTATCA 58.171 30.769 0.00 0.00 37.55 2.15
433 434 8.839310 ATTATCTATGTTATTCTCACTGTGGC 57.161 34.615 8.11 0.00 0.00 5.01
434 435 5.675684 TCTATGTTATTCTCACTGTGGCA 57.324 39.130 8.11 0.00 0.00 4.92
435 436 5.664457 TCTATGTTATTCTCACTGTGGCAG 58.336 41.667 8.11 0.00 37.52 4.85
436 437 3.769739 TGTTATTCTCACTGTGGCAGT 57.230 42.857 8.11 0.00 46.51 4.40
437 438 4.085357 TGTTATTCTCACTGTGGCAGTT 57.915 40.909 8.11 0.00 42.59 3.16
522 532 3.081804 TCTCACTCGATTCAGTGCACTA 58.918 45.455 21.20 5.19 43.18 2.74
531 541 3.769739 TTCAGTGCACTATGACCTTGT 57.230 42.857 21.20 0.00 0.00 3.16
536 546 5.103000 CAGTGCACTATGACCTTGTAGTAC 58.897 45.833 21.20 0.00 30.37 2.73
538 548 5.125739 AGTGCACTATGACCTTGTAGTACTC 59.874 44.000 20.16 0.00 30.37 2.59
626 1029 0.183014 AGCCTCCATCATCAAGCAGG 59.817 55.000 0.00 0.00 0.00 4.85
630 1033 2.562635 CTCCATCATCAAGCAGGAGTG 58.437 52.381 0.00 0.00 40.71 3.51
683 1087 4.034742 TCAATTTAATTTACTCGGAGCGGC 59.965 41.667 4.58 0.00 0.00 6.53
755 1163 5.500645 AGACGAAAAGGAAGAAAAAGTGG 57.499 39.130 0.00 0.00 0.00 4.00
756 1164 4.041740 ACGAAAAGGAAGAAAAAGTGGC 57.958 40.909 0.00 0.00 0.00 5.01
757 1165 3.181479 ACGAAAAGGAAGAAAAAGTGGCC 60.181 43.478 0.00 0.00 0.00 5.36
758 1166 3.181480 CGAAAAGGAAGAAAAAGTGGCCA 60.181 43.478 0.00 0.00 0.00 5.36
759 1167 4.501400 CGAAAAGGAAGAAAAAGTGGCCAT 60.501 41.667 9.72 0.00 0.00 4.40
760 1168 4.341366 AAAGGAAGAAAAAGTGGCCATG 57.659 40.909 9.72 0.00 0.00 3.66
761 1169 3.243359 AGGAAGAAAAAGTGGCCATGA 57.757 42.857 9.72 0.00 0.00 3.07
762 1170 3.575805 AGGAAGAAAAAGTGGCCATGAA 58.424 40.909 9.72 0.00 0.00 2.57
763 1171 3.966665 AGGAAGAAAAAGTGGCCATGAAA 59.033 39.130 9.72 0.00 0.00 2.69
764 1172 4.039609 AGGAAGAAAAAGTGGCCATGAAAG 59.960 41.667 9.72 0.00 0.00 2.62
765 1173 4.202253 GGAAGAAAAAGTGGCCATGAAAGT 60.202 41.667 9.72 0.00 0.00 2.66
766 1174 5.357742 AAGAAAAAGTGGCCATGAAAGTT 57.642 34.783 9.72 0.00 0.00 2.66
767 1175 4.696455 AGAAAAAGTGGCCATGAAAGTTG 58.304 39.130 9.72 0.00 0.00 3.16
768 1176 4.162131 AGAAAAAGTGGCCATGAAAGTTGT 59.838 37.500 9.72 0.00 0.00 3.32
769 1177 5.362430 AGAAAAAGTGGCCATGAAAGTTGTA 59.638 36.000 9.72 0.00 0.00 2.41
831 1241 4.864334 GCCCCCGCCACTCATCAG 62.864 72.222 0.00 0.00 0.00 2.90
877 1287 2.172372 GGCTCAGCTCGTCTGCATG 61.172 63.158 0.00 0.00 42.56 4.06
878 1288 2.811066 GCTCAGCTCGTCTGCATGC 61.811 63.158 11.82 11.82 42.56 4.06
879 1289 1.447314 CTCAGCTCGTCTGCATGCA 60.447 57.895 21.29 21.29 42.56 3.96
880 1290 1.422179 CTCAGCTCGTCTGCATGCAG 61.422 60.000 36.80 36.80 42.56 4.41
881 1291 2.125229 AGCTCGTCTGCATGCAGG 60.125 61.111 39.72 27.67 43.75 4.85
882 1292 2.125391 GCTCGTCTGCATGCAGGA 60.125 61.111 39.72 29.81 43.75 3.86
883 1293 2.459442 GCTCGTCTGCATGCAGGAC 61.459 63.158 39.72 32.39 43.75 3.85
884 1294 1.812922 CTCGTCTGCATGCAGGACC 60.813 63.158 39.72 27.70 43.75 4.46
885 1295 2.046988 CGTCTGCATGCAGGACCA 60.047 61.111 39.72 22.99 43.75 4.02
886 1296 2.104859 CGTCTGCATGCAGGACCAG 61.105 63.158 39.72 24.60 43.75 4.00
887 1297 2.045634 TCTGCATGCAGGACCAGC 60.046 61.111 39.72 1.05 43.75 4.85
888 1298 2.045242 CTGCATGCAGGACCAGCT 60.045 61.111 35.39 0.00 40.17 4.24
889 1299 1.222661 CTGCATGCAGGACCAGCTA 59.777 57.895 35.39 3.24 40.17 3.32
890 1300 0.814410 CTGCATGCAGGACCAGCTAG 60.814 60.000 35.39 10.64 40.17 3.42
891 1301 2.185494 GCATGCAGGACCAGCTAGC 61.185 63.158 14.21 6.62 0.00 3.42
892 1302 1.222661 CATGCAGGACCAGCTAGCA 59.777 57.895 18.83 4.41 39.79 3.49
893 1303 1.094073 CATGCAGGACCAGCTAGCAC 61.094 60.000 18.83 5.14 38.12 4.40
894 1304 2.124942 GCAGGACCAGCTAGCACC 60.125 66.667 18.83 13.96 0.00 5.01
895 1305 2.185350 CAGGACCAGCTAGCACCG 59.815 66.667 18.83 5.81 0.00 4.94
896 1306 2.283966 AGGACCAGCTAGCACCGT 60.284 61.111 18.83 9.32 0.00 4.83
897 1307 2.184579 GGACCAGCTAGCACCGTC 59.815 66.667 18.83 17.32 0.00 4.79
898 1308 2.352032 GGACCAGCTAGCACCGTCT 61.352 63.158 18.83 0.00 0.00 4.18
899 1309 1.139947 GACCAGCTAGCACCGTCTC 59.860 63.158 18.83 0.00 0.00 3.36
900 1310 1.595993 GACCAGCTAGCACCGTCTCA 61.596 60.000 18.83 0.00 0.00 3.27
901 1311 0.972983 ACCAGCTAGCACCGTCTCAT 60.973 55.000 18.83 0.00 0.00 2.90
913 1323 0.587737 CGTCTCATCTCGACACGCTC 60.588 60.000 0.00 0.00 29.12 5.03
915 1325 0.393132 TCTCATCTCGACACGCTCCT 60.393 55.000 0.00 0.00 0.00 3.69
925 1335 0.108138 ACACGCTCCTGCACTAATCC 60.108 55.000 0.00 0.00 39.64 3.01
928 1338 1.202580 ACGCTCCTGCACTAATCCATC 60.203 52.381 0.00 0.00 39.64 3.51
968 1381 0.627451 TCCCAAGGAGGAGCGTACTA 59.373 55.000 0.00 0.00 41.22 1.82
988 1405 6.345920 ACTACAAAGAAATATTCGCCGAAG 57.654 37.500 5.52 0.00 34.02 3.79
1041 1458 1.366111 CGACCCGTAATTGGCTGGTG 61.366 60.000 3.43 0.00 0.00 4.17
1059 1476 0.601558 TGACTCGGCTGTGGAGTTAC 59.398 55.000 0.00 0.00 44.41 2.50
1063 1480 2.093106 CTCGGCTGTGGAGTTACTACT 58.907 52.381 0.00 0.00 37.31 2.57
1133 1550 2.747686 GTCTTCCCGTTCCCTGCA 59.252 61.111 0.00 0.00 0.00 4.41
1222 1639 1.915266 CCCAGCTGGTCAGTCTCCA 60.915 63.158 30.63 0.00 0.00 3.86
1387 1811 2.291153 CCAGAAGCCCATCTCCAAGAAA 60.291 50.000 0.00 0.00 0.00 2.52
1491 1915 2.606519 CCCCTCGTCCAGGTCCAA 60.607 66.667 0.00 0.00 41.51 3.53
1621 2045 4.927782 GGGTGCACGTGCTGGTCA 62.928 66.667 37.59 17.61 42.66 4.02
1777 2201 1.888215 TCTACCTCGTGACGTGAAGT 58.112 50.000 8.77 1.69 0.00 3.01
1784 2208 0.314302 CGTGACGTGAAGTTCTCCCT 59.686 55.000 4.17 0.00 0.00 4.20
1798 2222 1.448922 CTCCCTCCTGTCGATCGACC 61.449 65.000 37.58 23.42 43.97 4.79
1866 2300 7.415229 AGAGGTGTATTTCTTGTTCGTTTTTC 58.585 34.615 0.00 0.00 0.00 2.29
1881 2315 5.617252 TCGTTTTTCTAGAACTTGGACCAT 58.383 37.500 4.18 0.00 0.00 3.55
1895 2329 7.141758 ACTTGGACCATATGTCAGTCAATAT 57.858 36.000 11.26 0.00 46.38 1.28
1898 2332 8.821686 TTGGACCATATGTCAGTCAATATTTT 57.178 30.769 11.26 0.00 46.38 1.82
1901 2335 7.040409 GGACCATATGTCAGTCAATATTTTCCC 60.040 40.741 11.26 0.00 46.38 3.97
1902 2336 7.353525 ACCATATGTCAGTCAATATTTTCCCA 58.646 34.615 1.24 0.00 0.00 4.37
1903 2337 7.285401 ACCATATGTCAGTCAATATTTTCCCAC 59.715 37.037 1.24 0.00 0.00 4.61
1904 2338 7.255590 CCATATGTCAGTCAATATTTTCCCACC 60.256 40.741 1.24 0.00 0.00 4.61
1906 2340 5.389520 TGTCAGTCAATATTTTCCCACCAA 58.610 37.500 0.00 0.00 0.00 3.67
1908 2342 5.016173 TCAGTCAATATTTTCCCACCAAGG 58.984 41.667 0.00 0.00 37.03 3.61
1921 2355 3.963129 CCACCAAGGGCTTGTATTAAGA 58.037 45.455 0.00 0.00 38.85 2.10
1922 2356 3.694566 CCACCAAGGGCTTGTATTAAGAC 59.305 47.826 0.00 0.00 38.85 3.01
1923 2357 4.567747 CCACCAAGGGCTTGTATTAAGACT 60.568 45.833 1.39 0.00 38.85 3.24
1924 2358 5.338871 CCACCAAGGGCTTGTATTAAGACTA 60.339 44.000 1.39 0.00 38.85 2.59
1925 2359 5.817816 CACCAAGGGCTTGTATTAAGACTAG 59.182 44.000 7.24 7.24 38.85 2.57
1926 2360 5.487845 ACCAAGGGCTTGTATTAAGACTAGT 59.512 40.000 12.19 0.00 38.85 2.57
1927 2361 6.049790 CCAAGGGCTTGTATTAAGACTAGTC 58.950 44.000 15.41 15.41 38.85 2.59
1928 2362 6.351881 CCAAGGGCTTGTATTAAGACTAGTCA 60.352 42.308 24.44 4.70 38.85 3.41
1929 2363 6.223351 AGGGCTTGTATTAAGACTAGTCAC 57.777 41.667 24.44 13.59 29.71 3.67
1930 2364 5.720041 AGGGCTTGTATTAAGACTAGTCACA 59.280 40.000 24.44 15.95 29.71 3.58
1931 2365 6.043411 GGGCTTGTATTAAGACTAGTCACAG 58.957 44.000 24.44 13.08 29.71 3.66
1932 2366 6.351117 GGGCTTGTATTAAGACTAGTCACAGT 60.351 42.308 24.44 10.64 29.71 3.55
1933 2367 6.531948 GGCTTGTATTAAGACTAGTCACAGTG 59.468 42.308 24.44 15.05 28.80 3.66
1934 2368 6.531948 GCTTGTATTAAGACTAGTCACAGTGG 59.468 42.308 24.44 13.03 0.00 4.00
1935 2369 6.525578 TGTATTAAGACTAGTCACAGTGGG 57.474 41.667 24.44 0.00 0.00 4.61
1936 2370 5.421056 TGTATTAAGACTAGTCACAGTGGGG 59.579 44.000 24.44 0.00 0.00 4.96
1937 2371 2.696526 AAGACTAGTCACAGTGGGGA 57.303 50.000 24.44 0.00 0.00 4.81
1938 2372 2.223803 AGACTAGTCACAGTGGGGAG 57.776 55.000 24.44 0.00 0.00 4.30
1939 2373 1.429687 AGACTAGTCACAGTGGGGAGT 59.570 52.381 24.44 1.39 0.00 3.85
1940 2374 2.648304 AGACTAGTCACAGTGGGGAGTA 59.352 50.000 24.44 0.00 0.00 2.59
1941 2375 3.075582 AGACTAGTCACAGTGGGGAGTAA 59.924 47.826 24.44 0.00 0.00 2.24
1942 2376 4.024670 GACTAGTCACAGTGGGGAGTAAT 58.975 47.826 18.20 0.00 0.00 1.89
1943 2377 4.426704 ACTAGTCACAGTGGGGAGTAATT 58.573 43.478 0.00 0.00 0.00 1.40
1944 2378 4.844655 ACTAGTCACAGTGGGGAGTAATTT 59.155 41.667 0.00 0.00 0.00 1.82
1945 2379 6.021030 ACTAGTCACAGTGGGGAGTAATTTA 58.979 40.000 0.00 0.00 0.00 1.40
1946 2380 5.422214 AGTCACAGTGGGGAGTAATTTAG 57.578 43.478 0.00 0.00 0.00 1.85
1947 2381 5.091552 AGTCACAGTGGGGAGTAATTTAGA 58.908 41.667 0.00 0.00 0.00 2.10
1948 2382 5.046520 AGTCACAGTGGGGAGTAATTTAGAC 60.047 44.000 0.00 0.00 0.00 2.59
2106 2549 2.223479 GCAACGCGTCCCATATTCAAAT 60.223 45.455 14.44 0.00 0.00 2.32
2505 3060 0.034896 TGTTCCTCTTCTTGGCGTCC 59.965 55.000 0.00 0.00 0.00 4.79
2582 3137 1.298157 TTCGTCATCAAAGCAGCCCG 61.298 55.000 0.00 0.00 0.00 6.13
2585 3140 3.830192 CATCAAAGCAGCCCGCCC 61.830 66.667 0.00 0.00 44.04 6.13
2651 3206 2.630317 CGAGGCAATGCTCGATGC 59.370 61.111 17.60 0.00 44.85 3.91
2851 3454 3.306849 GGAGGTACTTGAACTCTTGGTCC 60.307 52.174 0.00 0.00 41.55 4.46
2864 3467 1.678598 TTGGTCCCTGTTGTCGTCGT 61.679 55.000 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.566530 GTGTTGCATGTTATCACACATATTTTA 57.433 29.630 10.02 0.00 35.51 1.52
1 2 8.306038 AGTGTTGCATGTTATCACACATATTTT 58.694 29.630 15.74 0.00 35.51 1.82
2 3 7.829725 AGTGTTGCATGTTATCACACATATTT 58.170 30.769 15.74 0.00 35.51 1.40
3 4 7.395190 AGTGTTGCATGTTATCACACATATT 57.605 32.000 15.74 0.00 35.51 1.28
4 5 7.121020 TGAAGTGTTGCATGTTATCACACATAT 59.879 33.333 15.74 4.04 35.51 1.78
5 6 6.429385 TGAAGTGTTGCATGTTATCACACATA 59.571 34.615 15.74 1.77 35.51 2.29
6 7 5.241285 TGAAGTGTTGCATGTTATCACACAT 59.759 36.000 15.74 5.81 37.93 3.21
7 8 4.578105 TGAAGTGTTGCATGTTATCACACA 59.422 37.500 15.74 0.00 35.03 3.72
8 9 5.107109 TGAAGTGTTGCATGTTATCACAC 57.893 39.130 7.36 7.36 35.03 3.82
9 10 5.963176 ATGAAGTGTTGCATGTTATCACA 57.037 34.783 12.61 0.00 37.31 3.58
10 11 8.915871 ATAAATGAAGTGTTGCATGTTATCAC 57.084 30.769 0.00 0.30 0.00 3.06
14 15 7.973388 GCCTAATAAATGAAGTGTTGCATGTTA 59.027 33.333 0.00 0.00 0.00 2.41
15 16 6.813152 GCCTAATAAATGAAGTGTTGCATGTT 59.187 34.615 0.00 0.00 0.00 2.71
16 17 6.153340 AGCCTAATAAATGAAGTGTTGCATGT 59.847 34.615 0.00 0.00 0.00 3.21
17 18 6.567050 AGCCTAATAAATGAAGTGTTGCATG 58.433 36.000 0.00 0.00 0.00 4.06
18 19 6.780457 AGCCTAATAAATGAAGTGTTGCAT 57.220 33.333 0.00 0.00 0.00 3.96
19 20 7.880160 ATAGCCTAATAAATGAAGTGTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
20 21 9.273016 TCTATAGCCTAATAAATGAAGTGTTGC 57.727 33.333 0.00 0.00 0.00 4.17
30 31 9.883142 GCAAGATGAGTCTATAGCCTAATAAAT 57.117 33.333 0.00 0.00 33.30 1.40
31 32 8.314751 GGCAAGATGAGTCTATAGCCTAATAAA 58.685 37.037 0.00 0.00 40.78 1.40
32 33 7.676043 AGGCAAGATGAGTCTATAGCCTAATAA 59.324 37.037 13.74 0.00 46.63 1.40
33 34 7.185565 AGGCAAGATGAGTCTATAGCCTAATA 58.814 38.462 13.74 0.00 46.63 0.98
34 35 6.022315 AGGCAAGATGAGTCTATAGCCTAAT 58.978 40.000 13.74 0.00 46.63 1.73
35 36 5.398236 AGGCAAGATGAGTCTATAGCCTAA 58.602 41.667 13.74 0.00 46.63 2.69
36 37 5.004361 AGGCAAGATGAGTCTATAGCCTA 57.996 43.478 13.74 0.00 46.63 3.93
37 38 3.855668 AGGCAAGATGAGTCTATAGCCT 58.144 45.455 11.05 11.05 45.15 4.58
38 39 4.039730 TCAAGGCAAGATGAGTCTATAGCC 59.960 45.833 0.00 0.00 42.62 3.93
39 40 5.207110 TCAAGGCAAGATGAGTCTATAGC 57.793 43.478 0.00 0.00 33.30 2.97
40 41 8.530311 ACATATCAAGGCAAGATGAGTCTATAG 58.470 37.037 0.00 0.00 33.30 1.31
41 42 8.309656 CACATATCAAGGCAAGATGAGTCTATA 58.690 37.037 2.43 0.00 33.30 1.31
42 43 7.160049 CACATATCAAGGCAAGATGAGTCTAT 58.840 38.462 2.43 0.00 33.30 1.98
43 44 6.098838 ACACATATCAAGGCAAGATGAGTCTA 59.901 38.462 2.43 0.00 33.30 2.59
44 45 5.104610 ACACATATCAAGGCAAGATGAGTCT 60.105 40.000 2.43 0.00 35.82 3.24
45 46 5.007430 CACACATATCAAGGCAAGATGAGTC 59.993 44.000 2.43 0.00 0.00 3.36
46 47 4.880120 CACACATATCAAGGCAAGATGAGT 59.120 41.667 2.43 0.00 0.00 3.41
47 48 5.121105 TCACACATATCAAGGCAAGATGAG 58.879 41.667 2.43 0.00 0.00 2.90
48 49 5.101648 TCACACATATCAAGGCAAGATGA 57.898 39.130 2.43 0.00 0.00 2.92
49 50 5.298527 ACATCACACATATCAAGGCAAGATG 59.701 40.000 0.00 0.00 36.24 2.90
50 51 5.443283 ACATCACACATATCAAGGCAAGAT 58.557 37.500 0.00 0.00 0.00 2.40
51 52 4.847198 ACATCACACATATCAAGGCAAGA 58.153 39.130 0.00 0.00 0.00 3.02
52 53 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
53 54 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
54 55 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
55 56 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
56 57 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
57 58 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
63 64 9.409918 ACTAGTAGTATGAGTAACATCACACAT 57.590 33.333 0.00 0.00 40.07 3.21
64 65 8.803397 ACTAGTAGTATGAGTAACATCACACA 57.197 34.615 0.00 0.00 40.07 3.72
76 77 9.927668 GGAGGTAGTAGTTACTAGTAGTATGAG 57.072 40.741 10.82 0.00 39.29 2.90
77 78 8.580720 CGGAGGTAGTAGTTACTAGTAGTATGA 58.419 40.741 10.82 0.00 39.29 2.15
78 79 8.364142 ACGGAGGTAGTAGTTACTAGTAGTATG 58.636 40.741 10.82 1.10 39.29 2.39
79 80 8.485578 ACGGAGGTAGTAGTTACTAGTAGTAT 57.514 38.462 10.82 0.09 39.29 2.12
80 81 7.014422 GGACGGAGGTAGTAGTTACTAGTAGTA 59.986 44.444 5.90 5.90 39.29 1.82
81 82 6.183360 GGACGGAGGTAGTAGTTACTAGTAGT 60.183 46.154 8.14 8.14 39.29 2.73
82 83 6.220201 GGACGGAGGTAGTAGTTACTAGTAG 58.780 48.000 7.15 0.00 39.29 2.57
83 84 5.221263 CGGACGGAGGTAGTAGTTACTAGTA 60.221 48.000 0.00 0.00 39.29 1.82
84 85 4.442192 CGGACGGAGGTAGTAGTTACTAGT 60.442 50.000 0.00 0.00 39.29 2.57
85 86 4.054671 CGGACGGAGGTAGTAGTTACTAG 58.945 52.174 0.00 0.00 39.29 2.57
86 87 3.181465 CCGGACGGAGGTAGTAGTTACTA 60.181 52.174 4.40 0.00 36.15 1.82
87 88 2.420687 CCGGACGGAGGTAGTAGTTACT 60.421 54.545 4.40 0.00 37.64 2.24
88 89 1.943340 CCGGACGGAGGTAGTAGTTAC 59.057 57.143 4.40 0.00 37.50 2.50
89 90 1.134098 CCCGGACGGAGGTAGTAGTTA 60.134 57.143 13.13 0.00 37.50 2.24
90 91 0.394899 CCCGGACGGAGGTAGTAGTT 60.395 60.000 13.13 0.00 37.50 2.24
91 92 1.225704 CCCGGACGGAGGTAGTAGT 59.774 63.158 13.13 0.00 37.50 2.73
92 93 0.394899 AACCCGGACGGAGGTAGTAG 60.395 60.000 13.13 0.00 34.45 2.57
93 94 0.039618 AAACCCGGACGGAGGTAGTA 59.960 55.000 13.13 0.00 34.45 1.82
94 95 0.039618 TAAACCCGGACGGAGGTAGT 59.960 55.000 13.13 0.00 34.45 2.73
95 96 1.406903 ATAAACCCGGACGGAGGTAG 58.593 55.000 13.13 0.00 34.45 3.18
96 97 1.481772 CAATAAACCCGGACGGAGGTA 59.518 52.381 13.13 1.24 34.45 3.08
97 98 0.251073 CAATAAACCCGGACGGAGGT 59.749 55.000 13.13 0.00 38.27 3.85
98 99 0.463116 CCAATAAACCCGGACGGAGG 60.463 60.000 13.13 0.00 37.50 4.30
99 100 0.251073 ACCAATAAACCCGGACGGAG 59.749 55.000 13.13 5.04 37.50 4.63
100 101 0.249955 GACCAATAAACCCGGACGGA 59.750 55.000 13.13 0.00 37.50 4.69
101 102 0.745486 GGACCAATAAACCCGGACGG 60.745 60.000 0.73 3.25 37.81 4.79
102 103 0.745486 GGGACCAATAAACCCGGACG 60.745 60.000 0.73 0.00 34.03 4.79
103 104 0.328926 TGGGACCAATAAACCCGGAC 59.671 55.000 0.73 0.00 45.91 4.79
104 105 1.300927 ATGGGACCAATAAACCCGGA 58.699 50.000 0.73 0.00 45.91 5.14
105 106 1.754226 CAATGGGACCAATAAACCCGG 59.246 52.381 0.00 0.00 45.91 5.73
106 107 2.452505 ACAATGGGACCAATAAACCCG 58.547 47.619 0.00 0.00 45.91 5.28
107 108 6.553953 AAATACAATGGGACCAATAAACCC 57.446 37.500 0.00 0.00 43.51 4.11
108 109 6.127563 ACGAAATACAATGGGACCAATAAACC 60.128 38.462 0.00 0.00 0.00 3.27
109 110 6.859017 ACGAAATACAATGGGACCAATAAAC 58.141 36.000 0.00 0.00 0.00 2.01
110 111 7.067251 GGTACGAAATACAATGGGACCAATAAA 59.933 37.037 0.00 0.00 35.23 1.40
111 112 6.543100 GGTACGAAATACAATGGGACCAATAA 59.457 38.462 0.00 0.00 35.23 1.40
112 113 6.056884 GGTACGAAATACAATGGGACCAATA 58.943 40.000 0.00 0.00 35.23 1.90
113 114 4.885325 GGTACGAAATACAATGGGACCAAT 59.115 41.667 0.00 0.00 35.23 3.16
114 115 4.263374 TGGTACGAAATACAATGGGACCAA 60.263 41.667 0.00 0.00 35.23 3.67
115 116 3.263681 TGGTACGAAATACAATGGGACCA 59.736 43.478 0.00 0.00 35.23 4.02
116 117 3.876341 TGGTACGAAATACAATGGGACC 58.124 45.455 0.00 0.00 35.23 4.46
117 118 5.883503 TTTGGTACGAAATACAATGGGAC 57.116 39.130 0.00 0.00 35.23 4.46
118 119 7.469537 AAATTTGGTACGAAATACAATGGGA 57.530 32.000 15.15 0.00 35.23 4.37
119 120 7.815068 TCAAAATTTGGTACGAAATACAATGGG 59.185 33.333 15.15 3.53 35.23 4.00
120 121 8.643752 GTCAAAATTTGGTACGAAATACAATGG 58.356 33.333 15.15 4.38 35.23 3.16
121 122 8.643752 GGTCAAAATTTGGTACGAAATACAATG 58.356 33.333 15.15 11.68 35.23 2.82
122 123 8.361139 TGGTCAAAATTTGGTACGAAATACAAT 58.639 29.630 15.15 0.00 35.23 2.71
123 124 7.713750 TGGTCAAAATTTGGTACGAAATACAA 58.286 30.769 15.15 2.35 35.23 2.41
124 125 7.273320 TGGTCAAAATTTGGTACGAAATACA 57.727 32.000 15.15 6.51 35.23 2.29
125 126 9.498307 CTATGGTCAAAATTTGGTACGAAATAC 57.502 33.333 15.15 9.96 0.00 1.89
126 127 9.451002 TCTATGGTCAAAATTTGGTACGAAATA 57.549 29.630 15.15 0.08 0.00 1.40
127 128 8.343168 TCTATGGTCAAAATTTGGTACGAAAT 57.657 30.769 9.78 9.78 0.00 2.17
128 129 7.747155 TCTATGGTCAAAATTTGGTACGAAA 57.253 32.000 5.47 5.47 0.00 3.46
129 130 7.931578 ATCTATGGTCAAAATTTGGTACGAA 57.068 32.000 5.83 0.00 0.00 3.85
130 131 7.931578 AATCTATGGTCAAAATTTGGTACGA 57.068 32.000 5.83 0.00 0.00 3.43
149 150 9.601971 GCGTGAACATTTTGTTAGTTTAATCTA 57.398 29.630 0.00 0.00 41.28 1.98
150 151 8.132362 TGCGTGAACATTTTGTTAGTTTAATCT 58.868 29.630 0.00 0.00 41.28 2.40
151 152 8.276060 TGCGTGAACATTTTGTTAGTTTAATC 57.724 30.769 0.00 0.00 41.28 1.75
152 153 8.698854 CATGCGTGAACATTTTGTTAGTTTAAT 58.301 29.630 0.00 0.00 41.28 1.40
153 154 7.702772 ACATGCGTGAACATTTTGTTAGTTTAA 59.297 29.630 14.17 0.00 41.28 1.52
154 155 7.197017 ACATGCGTGAACATTTTGTTAGTTTA 58.803 30.769 14.17 0.00 41.28 2.01
155 156 6.039616 ACATGCGTGAACATTTTGTTAGTTT 58.960 32.000 14.17 0.00 41.28 2.66
156 157 5.587289 ACATGCGTGAACATTTTGTTAGTT 58.413 33.333 14.17 0.00 41.28 2.24
157 158 5.181690 ACATGCGTGAACATTTTGTTAGT 57.818 34.783 14.17 0.00 41.28 2.24
158 159 5.115472 GTGACATGCGTGAACATTTTGTTAG 59.885 40.000 14.17 0.00 41.28 2.34
159 160 4.973051 GTGACATGCGTGAACATTTTGTTA 59.027 37.500 14.17 0.00 41.28 2.41
160 161 3.796178 GTGACATGCGTGAACATTTTGTT 59.204 39.130 14.17 0.00 44.37 2.83
161 162 3.371168 GTGACATGCGTGAACATTTTGT 58.629 40.909 14.17 0.00 0.00 2.83
162 163 2.725723 GGTGACATGCGTGAACATTTTG 59.274 45.455 14.17 0.00 0.00 2.44
163 164 2.360483 TGGTGACATGCGTGAACATTTT 59.640 40.909 14.17 0.00 33.40 1.82
164 165 1.952990 TGGTGACATGCGTGAACATTT 59.047 42.857 14.17 0.00 33.40 2.32
165 166 1.603456 TGGTGACATGCGTGAACATT 58.397 45.000 14.17 0.00 33.40 2.71
166 167 1.603456 TTGGTGACATGCGTGAACAT 58.397 45.000 14.17 0.00 42.32 2.71
167 168 1.064803 GTTTGGTGACATGCGTGAACA 59.935 47.619 14.17 9.53 42.32 3.18
168 169 1.064803 TGTTTGGTGACATGCGTGAAC 59.935 47.619 14.17 10.22 42.32 3.18
169 170 1.383523 TGTTTGGTGACATGCGTGAA 58.616 45.000 14.17 0.00 42.32 3.18
170 171 1.603456 ATGTTTGGTGACATGCGTGA 58.397 45.000 14.17 0.00 42.32 4.35
171 172 2.420628 AATGTTTGGTGACATGCGTG 57.579 45.000 3.82 3.82 40.03 5.34
172 173 6.449635 AATATAATGTTTGGTGACATGCGT 57.550 33.333 0.00 0.00 40.03 5.24
173 174 7.754069 AAAATATAATGTTTGGTGACATGCG 57.246 32.000 0.00 0.00 40.03 4.73
174 175 9.149225 TCAAAAATATAATGTTTGGTGACATGC 57.851 29.630 0.00 0.00 40.03 4.06
216 217 9.793252 CGAGAAAAATTATCTCATTGGATTTGT 57.207 29.630 16.91 0.00 42.79 2.83
219 220 9.177608 TGTCGAGAAAAATTATCTCATTGGATT 57.822 29.630 16.91 0.00 42.79 3.01
220 221 8.737168 TGTCGAGAAAAATTATCTCATTGGAT 57.263 30.769 16.91 0.00 42.79 3.41
221 222 8.615211 CATGTCGAGAAAAATTATCTCATTGGA 58.385 33.333 16.91 7.00 42.79 3.53
222 223 7.377928 GCATGTCGAGAAAAATTATCTCATTGG 59.622 37.037 16.91 5.32 42.79 3.16
223 224 7.911727 TGCATGTCGAGAAAAATTATCTCATTG 59.088 33.333 16.91 10.86 42.79 2.82
224 225 7.988737 TGCATGTCGAGAAAAATTATCTCATT 58.011 30.769 16.91 1.53 42.79 2.57
225 226 7.558161 TGCATGTCGAGAAAAATTATCTCAT 57.442 32.000 16.91 5.50 42.79 2.90
226 227 6.983474 TGCATGTCGAGAAAAATTATCTCA 57.017 33.333 16.91 3.84 42.79 3.27
227 228 7.633621 TCATGCATGTCGAGAAAAATTATCTC 58.366 34.615 25.43 9.93 39.94 2.75
228 229 7.558161 TCATGCATGTCGAGAAAAATTATCT 57.442 32.000 25.43 0.00 0.00 1.98
229 230 7.697710 TGTTCATGCATGTCGAGAAAAATTATC 59.302 33.333 25.43 2.50 0.00 1.75
230 231 7.537715 TGTTCATGCATGTCGAGAAAAATTAT 58.462 30.769 25.43 0.00 0.00 1.28
231 232 6.907741 TGTTCATGCATGTCGAGAAAAATTA 58.092 32.000 25.43 0.00 0.00 1.40
232 233 5.771469 TGTTCATGCATGTCGAGAAAAATT 58.229 33.333 25.43 0.00 0.00 1.82
233 234 5.375417 TGTTCATGCATGTCGAGAAAAAT 57.625 34.783 25.43 0.00 0.00 1.82
234 235 4.827304 TGTTCATGCATGTCGAGAAAAA 57.173 36.364 25.43 7.77 0.00 1.94
235 236 5.375417 AATGTTCATGCATGTCGAGAAAA 57.625 34.783 25.43 8.38 0.00 2.29
236 237 5.375417 AAATGTTCATGCATGTCGAGAAA 57.625 34.783 25.43 9.24 0.00 2.52
237 238 5.155643 CAAAATGTTCATGCATGTCGAGAA 58.844 37.500 25.43 9.97 0.00 2.87
238 239 4.216042 ACAAAATGTTCATGCATGTCGAGA 59.784 37.500 25.43 12.17 0.00 4.04
239 240 4.478699 ACAAAATGTTCATGCATGTCGAG 58.521 39.130 25.43 11.20 0.00 4.04
240 241 4.502171 ACAAAATGTTCATGCATGTCGA 57.498 36.364 25.43 11.10 0.00 4.20
241 242 5.858049 ACTAACAAAATGTTCATGCATGTCG 59.142 36.000 25.43 0.94 40.22 4.35
242 243 7.642071 AACTAACAAAATGTTCATGCATGTC 57.358 32.000 25.43 19.05 40.22 3.06
243 244 9.539825 TTTAACTAACAAAATGTTCATGCATGT 57.460 25.926 25.43 4.01 40.22 3.21
281 282 9.758651 GGTCCTTTTTGTAGTTTGTATCAAATT 57.241 29.630 0.00 0.00 31.45 1.82
282 283 9.143155 AGGTCCTTTTTGTAGTTTGTATCAAAT 57.857 29.630 0.00 0.00 31.45 2.32
283 284 8.528044 AGGTCCTTTTTGTAGTTTGTATCAAA 57.472 30.769 0.00 0.00 0.00 2.69
284 285 9.802039 ATAGGTCCTTTTTGTAGTTTGTATCAA 57.198 29.630 0.00 0.00 0.00 2.57
295 296 9.603921 CGTCCTAATTTATAGGTCCTTTTTGTA 57.396 33.333 0.00 0.00 36.16 2.41
296 297 7.555195 CCGTCCTAATTTATAGGTCCTTTTTGT 59.445 37.037 0.00 0.00 36.16 2.83
297 298 7.771826 TCCGTCCTAATTTATAGGTCCTTTTTG 59.228 37.037 0.00 0.00 36.16 2.44
298 299 7.864770 TCCGTCCTAATTTATAGGTCCTTTTT 58.135 34.615 0.00 0.00 36.16 1.94
299 300 7.419865 CCTCCGTCCTAATTTATAGGTCCTTTT 60.420 40.741 0.00 0.00 36.16 2.27
300 301 6.042897 CCTCCGTCCTAATTTATAGGTCCTTT 59.957 42.308 0.00 0.00 36.16 3.11
301 302 5.543020 CCTCCGTCCTAATTTATAGGTCCTT 59.457 44.000 0.00 0.00 36.16 3.36
302 303 5.085219 CCTCCGTCCTAATTTATAGGTCCT 58.915 45.833 0.00 0.00 36.16 3.85
303 304 4.837298 ACCTCCGTCCTAATTTATAGGTCC 59.163 45.833 1.71 0.00 36.16 4.46
304 305 6.718912 ACTACCTCCGTCCTAATTTATAGGTC 59.281 42.308 0.00 0.00 37.32 3.85
305 306 6.618501 ACTACCTCCGTCCTAATTTATAGGT 58.381 40.000 0.00 0.00 39.38 3.08
306 307 7.148103 GCTACTACCTCCGTCCTAATTTATAGG 60.148 44.444 0.00 0.00 36.06 2.57
307 308 7.611079 AGCTACTACCTCCGTCCTAATTTATAG 59.389 40.741 0.00 0.00 0.00 1.31
308 309 7.465116 AGCTACTACCTCCGTCCTAATTTATA 58.535 38.462 0.00 0.00 0.00 0.98
309 310 6.313324 AGCTACTACCTCCGTCCTAATTTAT 58.687 40.000 0.00 0.00 0.00 1.40
310 311 5.699143 AGCTACTACCTCCGTCCTAATTTA 58.301 41.667 0.00 0.00 0.00 1.40
311 312 4.544683 AGCTACTACCTCCGTCCTAATTT 58.455 43.478 0.00 0.00 0.00 1.82
312 313 4.181799 AGCTACTACCTCCGTCCTAATT 57.818 45.455 0.00 0.00 0.00 1.40
313 314 3.880168 AGCTACTACCTCCGTCCTAAT 57.120 47.619 0.00 0.00 0.00 1.73
314 315 4.103785 ACATAGCTACTACCTCCGTCCTAA 59.896 45.833 0.00 0.00 0.00 2.69
315 316 3.649981 ACATAGCTACTACCTCCGTCCTA 59.350 47.826 0.00 0.00 0.00 2.94
316 317 2.442502 ACATAGCTACTACCTCCGTCCT 59.557 50.000 0.00 0.00 0.00 3.85
317 318 2.861274 ACATAGCTACTACCTCCGTCC 58.139 52.381 0.00 0.00 0.00 4.79
318 319 4.215185 GGTAACATAGCTACTACCTCCGTC 59.785 50.000 16.23 0.00 32.60 4.79
319 320 4.140536 GGTAACATAGCTACTACCTCCGT 58.859 47.826 16.23 0.00 32.60 4.69
320 321 4.139786 TGGTAACATAGCTACTACCTCCG 58.860 47.826 20.92 0.00 46.17 4.63
345 346 9.903682 CAAGCAATAAATGAAGAAAGAGAGAAA 57.096 29.630 0.00 0.00 0.00 2.52
346 347 9.071276 ACAAGCAATAAATGAAGAAAGAGAGAA 57.929 29.630 0.00 0.00 0.00 2.87
347 348 8.627208 ACAAGCAATAAATGAAGAAAGAGAGA 57.373 30.769 0.00 0.00 0.00 3.10
348 349 8.509690 TGACAAGCAATAAATGAAGAAAGAGAG 58.490 33.333 0.00 0.00 0.00 3.20
349 350 8.292448 GTGACAAGCAATAAATGAAGAAAGAGA 58.708 33.333 0.00 0.00 0.00 3.10
350 351 8.077991 TGTGACAAGCAATAAATGAAGAAAGAG 58.922 33.333 0.00 0.00 0.00 2.85
351 352 7.939782 TGTGACAAGCAATAAATGAAGAAAGA 58.060 30.769 0.00 0.00 0.00 2.52
352 353 8.752766 ATGTGACAAGCAATAAATGAAGAAAG 57.247 30.769 0.00 0.00 0.00 2.62
353 354 8.358895 TGATGTGACAAGCAATAAATGAAGAAA 58.641 29.630 0.00 0.00 0.00 2.52
354 355 7.884257 TGATGTGACAAGCAATAAATGAAGAA 58.116 30.769 0.00 0.00 0.00 2.52
355 356 7.451501 TGATGTGACAAGCAATAAATGAAGA 57.548 32.000 0.00 0.00 0.00 2.87
356 357 8.592155 CAATGATGTGACAAGCAATAAATGAAG 58.408 33.333 0.00 0.00 0.00 3.02
357 358 8.305317 TCAATGATGTGACAAGCAATAAATGAA 58.695 29.630 0.00 0.00 0.00 2.57
358 359 7.828712 TCAATGATGTGACAAGCAATAAATGA 58.171 30.769 0.00 0.00 0.00 2.57
359 360 8.642908 ATCAATGATGTGACAAGCAATAAATG 57.357 30.769 0.00 0.00 0.00 2.32
360 361 9.661563 AAATCAATGATGTGACAAGCAATAAAT 57.338 25.926 0.00 0.00 0.00 1.40
361 362 9.491675 AAAATCAATGATGTGACAAGCAATAAA 57.508 25.926 0.00 0.00 0.00 1.40
364 365 9.309516 GATAAAATCAATGATGTGACAAGCAAT 57.690 29.630 0.00 0.00 0.00 3.56
365 366 8.305317 TGATAAAATCAATGATGTGACAAGCAA 58.695 29.630 0.00 0.00 36.11 3.91
366 367 7.828712 TGATAAAATCAATGATGTGACAAGCA 58.171 30.769 0.00 0.00 36.11 3.91
367 368 8.692110 TTGATAAAATCAATGATGTGACAAGC 57.308 30.769 0.00 0.00 43.84 4.01
407 408 9.929180 GCCACAGTGAGAATAACATAGATAATA 57.071 33.333 0.62 0.00 0.00 0.98
408 409 8.432013 TGCCACAGTGAGAATAACATAGATAAT 58.568 33.333 0.62 0.00 0.00 1.28
409 410 7.791029 TGCCACAGTGAGAATAACATAGATAA 58.209 34.615 0.62 0.00 0.00 1.75
410 411 7.069950 ACTGCCACAGTGAGAATAACATAGATA 59.930 37.037 0.62 0.00 43.63 1.98
411 412 6.126940 ACTGCCACAGTGAGAATAACATAGAT 60.127 38.462 0.62 0.00 43.63 1.98
412 413 5.187772 ACTGCCACAGTGAGAATAACATAGA 59.812 40.000 0.62 0.00 43.63 1.98
413 414 5.423015 ACTGCCACAGTGAGAATAACATAG 58.577 41.667 0.62 0.00 43.63 2.23
414 415 5.420725 ACTGCCACAGTGAGAATAACATA 57.579 39.130 0.62 0.00 43.63 2.29
415 416 4.292186 ACTGCCACAGTGAGAATAACAT 57.708 40.909 0.62 0.00 43.63 2.71
416 417 3.769739 ACTGCCACAGTGAGAATAACA 57.230 42.857 0.62 0.00 43.63 2.41
417 418 4.065088 TCAACTGCCACAGTGAGAATAAC 58.935 43.478 0.62 0.00 44.62 1.89
418 419 4.350368 TCAACTGCCACAGTGAGAATAA 57.650 40.909 0.62 0.00 44.62 1.40
419 420 4.350368 TTCAACTGCCACAGTGAGAATA 57.650 40.909 0.62 0.00 44.62 1.75
420 421 2.936919 TCAACTGCCACAGTGAGAAT 57.063 45.000 0.62 0.00 44.62 2.40
421 422 2.708216 TTCAACTGCCACAGTGAGAA 57.292 45.000 0.62 6.42 44.62 2.87
422 423 2.170397 TCTTTCAACTGCCACAGTGAGA 59.830 45.455 0.62 0.40 44.62 3.27
423 424 2.547211 CTCTTTCAACTGCCACAGTGAG 59.453 50.000 0.62 0.00 44.62 3.51
424 425 2.564771 CTCTTTCAACTGCCACAGTGA 58.435 47.619 0.62 0.00 44.62 3.41
425 426 1.605710 CCTCTTTCAACTGCCACAGTG 59.394 52.381 0.15 0.00 44.62 3.66
427 428 1.876156 GACCTCTTTCAACTGCCACAG 59.124 52.381 0.00 0.00 37.52 3.66
428 429 1.476833 GGACCTCTTTCAACTGCCACA 60.477 52.381 0.00 0.00 0.00 4.17
429 430 1.239347 GGACCTCTTTCAACTGCCAC 58.761 55.000 0.00 0.00 0.00 5.01
430 431 0.843309 TGGACCTCTTTCAACTGCCA 59.157 50.000 0.00 0.00 0.00 4.92
431 432 1.239347 GTGGACCTCTTTCAACTGCC 58.761 55.000 0.00 0.00 0.00 4.85
432 433 0.868406 CGTGGACCTCTTTCAACTGC 59.132 55.000 0.00 0.00 0.00 4.40
433 434 0.868406 GCGTGGACCTCTTTCAACTG 59.132 55.000 0.00 0.00 0.00 3.16
434 435 0.468226 TGCGTGGACCTCTTTCAACT 59.532 50.000 0.00 0.00 0.00 3.16
435 436 1.305201 TTGCGTGGACCTCTTTCAAC 58.695 50.000 0.00 0.00 0.00 3.18
436 437 1.673920 GTTTGCGTGGACCTCTTTCAA 59.326 47.619 0.00 0.00 0.00 2.69
437 438 1.305201 GTTTGCGTGGACCTCTTTCA 58.695 50.000 0.00 0.00 0.00 2.69
531 541 5.658634 TCGGAACAGAGTAGTAGGAGTACTA 59.341 44.000 0.00 0.00 40.23 1.82
536 546 4.458295 TGTTTCGGAACAGAGTAGTAGGAG 59.542 45.833 4.79 0.00 40.71 3.69
538 548 4.217983 AGTGTTTCGGAACAGAGTAGTAGG 59.782 45.833 10.23 0.00 45.86 3.18
626 1029 2.603173 GCACAAGCTTACTGCAACACTC 60.603 50.000 18.91 0.00 45.94 3.51
630 1033 0.385974 CGGCACAAGCTTACTGCAAC 60.386 55.000 23.07 10.75 45.94 4.17
683 1087 0.606401 TTTTCTCCCTTCTGGCTGCG 60.606 55.000 0.00 0.00 0.00 5.18
755 1163 1.135689 CGTGCCTACAACTTTCATGGC 60.136 52.381 0.00 0.00 40.62 4.40
756 1164 1.135689 GCGTGCCTACAACTTTCATGG 60.136 52.381 0.00 0.00 0.00 3.66
757 1165 1.464023 CGCGTGCCTACAACTTTCATG 60.464 52.381 0.00 0.00 0.00 3.07
758 1166 0.796312 CGCGTGCCTACAACTTTCAT 59.204 50.000 0.00 0.00 0.00 2.57
759 1167 1.837538 GCGCGTGCCTACAACTTTCA 61.838 55.000 10.56 0.00 33.98 2.69
760 1168 1.154469 GCGCGTGCCTACAACTTTC 60.154 57.895 10.56 0.00 33.98 2.62
761 1169 2.943653 GCGCGTGCCTACAACTTT 59.056 55.556 10.56 0.00 33.98 2.66
762 1170 3.411351 CGCGCGTGCCTACAACTT 61.411 61.111 24.19 0.00 38.08 2.66
763 1171 4.657824 ACGCGCGTGCCTACAACT 62.658 61.111 37.37 5.31 38.08 3.16
764 1172 4.424430 CACGCGCGTGCCTACAAC 62.424 66.667 44.73 0.00 39.39 3.32
844 1254 3.755628 GCCGGTGACTGGTAGCGA 61.756 66.667 12.80 0.00 41.14 4.93
877 1287 2.124942 GGTGCTAGCTGGTCCTGC 60.125 66.667 17.23 12.66 0.00 4.85
878 1288 2.185350 CGGTGCTAGCTGGTCCTG 59.815 66.667 17.23 6.35 0.00 3.86
879 1289 2.283966 ACGGTGCTAGCTGGTCCT 60.284 61.111 17.23 1.71 0.00 3.85
880 1290 2.184579 GACGGTGCTAGCTGGTCC 59.815 66.667 17.23 11.71 0.00 4.46
881 1291 1.139947 GAGACGGTGCTAGCTGGTC 59.860 63.158 17.23 18.43 0.00 4.02
882 1292 0.972983 ATGAGACGGTGCTAGCTGGT 60.973 55.000 17.23 10.78 0.00 4.00
883 1293 0.249238 GATGAGACGGTGCTAGCTGG 60.249 60.000 17.23 7.46 0.00 4.85
884 1294 0.743688 AGATGAGACGGTGCTAGCTG 59.256 55.000 17.23 8.41 0.00 4.24
885 1295 1.028905 GAGATGAGACGGTGCTAGCT 58.971 55.000 17.23 0.00 0.00 3.32
886 1296 0.317436 CGAGATGAGACGGTGCTAGC 60.317 60.000 8.10 8.10 0.00 3.42
887 1297 1.003331 GTCGAGATGAGACGGTGCTAG 60.003 57.143 0.00 0.00 0.00 3.42
888 1298 1.015109 GTCGAGATGAGACGGTGCTA 58.985 55.000 0.00 0.00 0.00 3.49
889 1299 0.960861 TGTCGAGATGAGACGGTGCT 60.961 55.000 0.00 0.00 41.24 4.40
890 1300 0.798771 GTGTCGAGATGAGACGGTGC 60.799 60.000 0.00 0.00 41.24 5.01
891 1301 3.314339 GTGTCGAGATGAGACGGTG 57.686 57.895 0.00 0.00 41.24 4.94
895 1305 0.248296 GGAGCGTGTCGAGATGAGAC 60.248 60.000 5.87 0.00 37.51 3.36
896 1306 0.393132 AGGAGCGTGTCGAGATGAGA 60.393 55.000 5.87 0.00 0.00 3.27
897 1307 0.248417 CAGGAGCGTGTCGAGATGAG 60.248 60.000 5.87 0.00 0.00 2.90
898 1308 1.803289 CAGGAGCGTGTCGAGATGA 59.197 57.895 5.87 0.00 0.00 2.92
899 1309 1.875813 GCAGGAGCGTGTCGAGATG 60.876 63.158 0.00 0.00 0.00 2.90
900 1310 2.343426 TGCAGGAGCGTGTCGAGAT 61.343 57.895 0.00 0.00 46.23 2.75
901 1311 2.983592 TGCAGGAGCGTGTCGAGA 60.984 61.111 0.00 0.00 46.23 4.04
913 1323 3.126831 GAGTTCGATGGATTAGTGCAGG 58.873 50.000 0.00 0.00 0.00 4.85
915 1325 3.195610 AGTGAGTTCGATGGATTAGTGCA 59.804 43.478 0.00 0.00 0.00 4.57
925 1335 7.221067 GGAGTAATAAACTGAGTGAGTTCGATG 59.779 40.741 0.00 0.00 44.68 3.84
928 1338 5.805994 GGGAGTAATAAACTGAGTGAGTTCG 59.194 44.000 0.00 0.00 44.68 3.95
968 1381 3.181500 GGCTTCGGCGAATATTTCTTTGT 60.181 43.478 23.96 0.00 42.91 2.83
988 1405 2.817396 GCTCGTGGAAGCTCTGGC 60.817 66.667 0.00 0.00 39.27 4.85
1010 1427 2.243602 ACGGGTCGTGTACAAAATGT 57.756 45.000 0.00 0.00 39.18 2.71
1041 1458 0.889306 AGTAACTCCACAGCCGAGTC 59.111 55.000 0.00 0.00 39.69 3.36
1070 1487 1.216427 GCCCTCTTCTTCCCCATCAAT 59.784 52.381 0.00 0.00 0.00 2.57
1172 1589 2.604079 TGGGGGTCGAAGCCGTAA 60.604 61.111 0.00 0.00 36.39 3.18
1222 1639 4.525487 TGACGTGGGACTGACTAATTAAGT 59.475 41.667 0.00 0.00 42.80 2.24
1520 1944 2.282251 ACTGCAGGAGGACGACGA 60.282 61.111 19.93 0.00 0.00 4.20
1676 2100 4.430908 CTGAGGTTAACATACGGAACTCC 58.569 47.826 8.10 0.00 0.00 3.85
1692 2116 1.187087 GAGATTGACGTCCCTGAGGT 58.813 55.000 14.12 0.00 33.19 3.85
1777 2201 0.255033 TCGATCGACAGGAGGGAGAA 59.745 55.000 15.15 0.00 0.00 2.87
1784 2208 2.437895 AGCGGTCGATCGACAGGA 60.438 61.111 39.98 9.98 46.20 3.86
1798 2222 0.603569 AGTAGGAACAGTCACCAGCG 59.396 55.000 0.00 0.00 0.00 5.18
1866 2300 6.127338 TGACTGACATATGGTCCAAGTTCTAG 60.127 42.308 7.80 0.00 46.38 2.43
1881 2315 6.726379 TGGTGGGAAAATATTGACTGACATA 58.274 36.000 0.00 0.00 0.00 2.29
1901 2335 4.589908 AGTCTTAATACAAGCCCTTGGTG 58.410 43.478 12.22 0.00 44.45 4.17
1902 2336 4.929146 AGTCTTAATACAAGCCCTTGGT 57.071 40.909 12.22 1.74 44.45 3.67
1903 2337 5.990668 ACTAGTCTTAATACAAGCCCTTGG 58.009 41.667 12.22 0.00 44.45 3.61
1904 2338 6.535508 GTGACTAGTCTTAATACAAGCCCTTG 59.464 42.308 23.01 6.48 45.58 3.61
1906 2340 5.720041 TGTGACTAGTCTTAATACAAGCCCT 59.280 40.000 23.01 0.00 0.00 5.19
1908 2342 6.531948 CACTGTGACTAGTCTTAATACAAGCC 59.468 42.308 23.01 0.00 0.00 4.35
1909 2343 6.531948 CCACTGTGACTAGTCTTAATACAAGC 59.468 42.308 23.01 0.00 0.00 4.01
1910 2344 7.036220 CCCACTGTGACTAGTCTTAATACAAG 58.964 42.308 23.01 12.79 0.00 3.16
1911 2345 6.070995 CCCCACTGTGACTAGTCTTAATACAA 60.071 42.308 23.01 0.00 0.00 2.41
1912 2346 5.421056 CCCCACTGTGACTAGTCTTAATACA 59.579 44.000 23.01 16.57 0.00 2.29
1913 2347 5.655532 TCCCCACTGTGACTAGTCTTAATAC 59.344 44.000 23.01 13.00 0.00 1.89
1914 2348 5.834460 TCCCCACTGTGACTAGTCTTAATA 58.166 41.667 23.01 0.00 0.00 0.98
1915 2349 4.684724 TCCCCACTGTGACTAGTCTTAAT 58.315 43.478 23.01 4.63 0.00 1.40
1916 2350 4.087182 CTCCCCACTGTGACTAGTCTTAA 58.913 47.826 23.01 8.25 0.00 1.85
1917 2351 3.075582 ACTCCCCACTGTGACTAGTCTTA 59.924 47.826 23.01 11.22 0.00 2.10
1918 2352 2.158295 ACTCCCCACTGTGACTAGTCTT 60.158 50.000 23.01 3.04 0.00 3.01
1919 2353 1.429687 ACTCCCCACTGTGACTAGTCT 59.570 52.381 23.01 0.19 0.00 3.24
1920 2354 1.926108 ACTCCCCACTGTGACTAGTC 58.074 55.000 16.32 16.32 0.00 2.59
1921 2355 3.537795 TTACTCCCCACTGTGACTAGT 57.462 47.619 9.86 10.99 0.00 2.57
1922 2356 5.422214 AAATTACTCCCCACTGTGACTAG 57.578 43.478 9.86 5.62 0.00 2.57
1923 2357 6.154021 GTCTAAATTACTCCCCACTGTGACTA 59.846 42.308 9.86 0.00 0.00 2.59
1924 2358 5.046520 GTCTAAATTACTCCCCACTGTGACT 60.047 44.000 9.86 0.00 0.00 3.41
1925 2359 5.046520 AGTCTAAATTACTCCCCACTGTGAC 60.047 44.000 9.86 0.00 0.00 3.67
1926 2360 5.091552 AGTCTAAATTACTCCCCACTGTGA 58.908 41.667 9.86 0.00 0.00 3.58
1927 2361 5.422214 AGTCTAAATTACTCCCCACTGTG 57.578 43.478 0.00 0.00 0.00 3.66
1928 2362 6.262207 ACTAGTCTAAATTACTCCCCACTGT 58.738 40.000 0.00 0.00 0.00 3.55
1929 2363 6.793505 ACTAGTCTAAATTACTCCCCACTG 57.206 41.667 0.00 0.00 0.00 3.66
1930 2364 8.906238 TTTACTAGTCTAAATTACTCCCCACT 57.094 34.615 0.00 0.00 0.00 4.00
1931 2365 9.597170 CTTTTACTAGTCTAAATTACTCCCCAC 57.403 37.037 0.00 0.00 0.00 4.61
1932 2366 8.262933 GCTTTTACTAGTCTAAATTACTCCCCA 58.737 37.037 0.00 0.00 0.00 4.96
1933 2367 8.262933 TGCTTTTACTAGTCTAAATTACTCCCC 58.737 37.037 0.00 0.00 0.00 4.81
1934 2368 9.833917 ATGCTTTTACTAGTCTAAATTACTCCC 57.166 33.333 0.00 0.00 0.00 4.30
1940 2374 8.947115 GTGGACATGCTTTTACTAGTCTAAATT 58.053 33.333 0.00 0.00 0.00 1.82
1941 2375 8.322091 AGTGGACATGCTTTTACTAGTCTAAAT 58.678 33.333 0.00 0.00 0.00 1.40
1942 2376 7.676947 AGTGGACATGCTTTTACTAGTCTAAA 58.323 34.615 0.00 0.64 0.00 1.85
1943 2377 7.241042 AGTGGACATGCTTTTACTAGTCTAA 57.759 36.000 0.00 0.00 0.00 2.10
1944 2378 6.404403 CGAGTGGACATGCTTTTACTAGTCTA 60.404 42.308 0.00 0.00 0.00 2.59
1945 2379 5.622460 CGAGTGGACATGCTTTTACTAGTCT 60.622 44.000 0.00 0.00 0.00 3.24
1946 2380 4.563184 CGAGTGGACATGCTTTTACTAGTC 59.437 45.833 0.00 0.00 0.00 2.59
1947 2381 4.021368 ACGAGTGGACATGCTTTTACTAGT 60.021 41.667 0.00 0.00 0.00 2.57
1948 2382 4.495422 ACGAGTGGACATGCTTTTACTAG 58.505 43.478 0.00 0.00 0.00 2.57
1961 2395 4.754667 GGGGCCGAACGAGTGGAC 62.755 72.222 0.00 0.00 0.00 4.02
1984 2418 1.135257 CAAAAATACGCCGGCCAATGA 60.135 47.619 23.46 1.24 0.00 2.57
2328 2828 4.615815 GATGCCTCCGCGATGCCT 62.616 66.667 8.23 0.00 38.08 4.75
2379 2933 2.041081 CCTCACCCTGAACCAAATACCA 59.959 50.000 0.00 0.00 0.00 3.25
2582 3137 4.103103 GAAAACTGAGGCGCGGGC 62.103 66.667 17.31 17.31 38.90 6.13
2585 3140 0.440371 GAAGAGAAAACTGAGGCGCG 59.560 55.000 0.00 0.00 0.00 6.86
2681 3236 2.714259 CCAAGAAGGCGAAACACCA 58.286 52.632 0.00 0.00 0.00 4.17
2851 3454 0.031043 TGTACCACGACGACAACAGG 59.969 55.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.