Multiple sequence alignment - TraesCS1B01G240200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G240200 chr1B 100.000 2577 0 0 2453 5029 428064192 428066768 0.000000e+00 4759.0
1 TraesCS1B01G240200 chr1B 100.000 2214 0 0 1 2214 428061740 428063953 0.000000e+00 4089.0
2 TraesCS1B01G240200 chr1B 97.959 49 1 0 1 49 332152995 332152947 8.970000e-13 86.1
3 TraesCS1B01G240200 chr1A 94.027 2595 108 17 2453 5029 396422849 396425414 0.000000e+00 3890.0
4 TraesCS1B01G240200 chr1A 92.273 1333 58 23 898 2214 396421543 396422846 0.000000e+00 1849.0
5 TraesCS1B01G240200 chr1A 84.211 532 51 15 368 890 396408440 396408947 2.100000e-133 486.0
6 TraesCS1B01G240200 chr1A 91.489 47 4 0 321 367 396300234 396300280 1.170000e-06 65.8
7 TraesCS1B01G240200 chr1D 96.552 1711 49 4 2453 4161 315973344 315975046 0.000000e+00 2824.0
8 TraesCS1B01G240200 chr1D 91.823 1871 99 31 368 2214 315971501 315973341 0.000000e+00 2558.0
9 TraesCS1B01G240200 chr1D 86.469 776 63 17 4160 4922 315975127 315975873 0.000000e+00 813.0
10 TraesCS1B01G240200 chr1D 97.959 49 1 0 1 49 92646643 92646691 8.970000e-13 86.1
11 TraesCS1B01G240200 chr7D 98.039 51 1 0 1 51 186813491 186813541 6.930000e-14 89.8
12 TraesCS1B01G240200 chr5D 100.000 48 0 0 1 48 529395837 529395884 6.930000e-14 89.8
13 TraesCS1B01G240200 chr4A 98.039 51 1 0 1 51 130499456 130499506 6.930000e-14 89.8
14 TraesCS1B01G240200 chr2A 94.828 58 1 2 2 57 570068514 570068571 6.930000e-14 89.8
15 TraesCS1B01G240200 chr2A 96.154 52 2 0 1 52 73282722 73282773 8.970000e-13 86.1
16 TraesCS1B01G240200 chr7A 97.959 49 1 0 2 50 224840208 224840160 8.970000e-13 86.1
17 TraesCS1B01G240200 chr5B 94.545 55 3 0 1 55 262432346 262432292 8.970000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G240200 chr1B 428061740 428066768 5028 False 4424.0 4759 100.000000 1 5029 2 chr1B.!!$F1 5028
1 TraesCS1B01G240200 chr1A 396421543 396425414 3871 False 2869.5 3890 93.150000 898 5029 2 chr1A.!!$F3 4131
2 TraesCS1B01G240200 chr1A 396408440 396408947 507 False 486.0 486 84.211000 368 890 1 chr1A.!!$F2 522
3 TraesCS1B01G240200 chr1D 315971501 315975873 4372 False 2065.0 2824 91.614667 368 4922 3 chr1D.!!$F2 4554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 82 0.100682 TCGCAAGATGCTCGTCCTAC 59.899 55.000 0.43 0.0 45.01 3.18 F
84 85 0.101399 CAAGATGCTCGTCCTACGCT 59.899 55.000 0.00 0.0 42.21 5.07 F
95 96 0.107066 TCCTACGCTACGGGATCACA 60.107 55.000 0.00 0.0 0.00 3.58 F
317 318 0.393077 AGATCAAATCCCGGCCTACG 59.607 55.000 0.00 0.0 43.80 3.51 F
1094 1125 0.537188 CACGTTAGCCTCTCCACCAT 59.463 55.000 0.00 0.0 0.00 3.55 F
1130 1161 0.914551 CAAAGCGACATCGAGTACGG 59.085 55.000 5.26 0.0 43.02 4.02 F
1903 1946 2.485814 CCAGCAACAGAGTAAAGGAAGC 59.514 50.000 0.00 0.0 0.00 3.86 F
1904 1947 3.141398 CAGCAACAGAGTAAAGGAAGCA 58.859 45.455 0.00 0.0 0.00 3.91 F
3564 3611 1.255667 TGAGGAAGCACGGGAGGTAC 61.256 60.000 0.00 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1242 1273 0.988063 GGCCAGAAGAGGAGGAAAGT 59.012 55.000 0.00 0.00 0.00 2.66 R
1880 1923 3.402628 TCCTTTACTCTGTTGCTGGTC 57.597 47.619 0.00 0.00 0.00 4.02 R
2035 2082 4.102524 AGAAAACTCACCAGTGTGACCATA 59.897 41.667 6.84 0.00 46.40 2.74 R
2184 2231 4.109766 CCACAATAGAAGCAATGCACATG 58.890 43.478 8.35 4.98 0.00 3.21 R
2994 3041 0.393402 TTGGCAGCTGCATACCTGAG 60.393 55.000 37.63 0.00 44.36 3.35 R
3078 3125 6.683110 GCACGAAGAAGGGAATAGAATACAGA 60.683 42.308 0.00 0.00 0.00 3.41 R
3233 3280 2.105134 TCGCCAAACCCTCTTTACTTCA 59.895 45.455 0.00 0.00 0.00 3.02 R
3883 3930 2.609491 GGGTCCGAAGCAAAACCATTTC 60.609 50.000 0.00 0.00 0.00 2.17 R
4628 4764 0.032952 ACTTGTTACGCGAGCTGGAA 59.967 50.000 15.93 0.00 31.61 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.717639 AAGTGTCAACCAGCTCAAGT 57.282 45.000 0.00 0.00 0.00 3.16
21 22 2.717639 AGTGTCAACCAGCTCAAGTT 57.282 45.000 0.00 0.00 0.00 2.66
22 23 3.004752 AGTGTCAACCAGCTCAAGTTT 57.995 42.857 0.00 0.00 0.00 2.66
23 24 3.356290 AGTGTCAACCAGCTCAAGTTTT 58.644 40.909 0.00 0.00 0.00 2.43
24 25 3.129287 AGTGTCAACCAGCTCAAGTTTTG 59.871 43.478 0.00 0.00 0.00 2.44
25 26 3.088532 TGTCAACCAGCTCAAGTTTTGT 58.911 40.909 0.00 0.00 0.00 2.83
26 27 3.119531 TGTCAACCAGCTCAAGTTTTGTG 60.120 43.478 0.00 0.00 0.00 3.33
27 28 3.128589 GTCAACCAGCTCAAGTTTTGTGA 59.871 43.478 0.00 0.00 0.00 3.58
28 29 3.128589 TCAACCAGCTCAAGTTTTGTGAC 59.871 43.478 0.00 0.00 0.00 3.67
29 30 2.024414 ACCAGCTCAAGTTTTGTGACC 58.976 47.619 0.00 0.00 0.00 4.02
30 31 2.301346 CCAGCTCAAGTTTTGTGACCT 58.699 47.619 0.00 0.00 0.00 3.85
31 32 3.118038 ACCAGCTCAAGTTTTGTGACCTA 60.118 43.478 0.00 0.00 0.00 3.08
32 33 3.251004 CCAGCTCAAGTTTTGTGACCTAC 59.749 47.826 0.00 0.00 0.00 3.18
33 34 3.876914 CAGCTCAAGTTTTGTGACCTACA 59.123 43.478 0.00 0.00 37.56 2.74
34 35 4.024556 CAGCTCAAGTTTTGTGACCTACAG 60.025 45.833 0.00 0.00 41.10 2.74
35 36 3.877508 GCTCAAGTTTTGTGACCTACAGT 59.122 43.478 0.00 0.00 41.10 3.55
36 37 4.260784 GCTCAAGTTTTGTGACCTACAGTG 60.261 45.833 0.00 0.00 41.10 3.66
37 38 5.092554 TCAAGTTTTGTGACCTACAGTGA 57.907 39.130 0.00 0.00 41.10 3.41
38 39 5.492895 TCAAGTTTTGTGACCTACAGTGAA 58.507 37.500 0.00 0.00 41.10 3.18
39 40 6.119536 TCAAGTTTTGTGACCTACAGTGAAT 58.880 36.000 0.00 0.00 41.10 2.57
40 41 6.601613 TCAAGTTTTGTGACCTACAGTGAATT 59.398 34.615 0.00 0.00 41.10 2.17
41 42 7.122055 TCAAGTTTTGTGACCTACAGTGAATTT 59.878 33.333 0.00 0.00 41.10 1.82
42 43 7.404671 AGTTTTGTGACCTACAGTGAATTTT 57.595 32.000 0.00 0.00 41.10 1.82
43 44 7.836842 AGTTTTGTGACCTACAGTGAATTTTT 58.163 30.769 0.00 0.00 41.10 1.94
44 45 7.973944 AGTTTTGTGACCTACAGTGAATTTTTC 59.026 33.333 0.00 0.00 41.10 2.29
45 46 7.639113 TTTGTGACCTACAGTGAATTTTTCT 57.361 32.000 0.00 0.00 41.10 2.52
46 47 6.861065 TGTGACCTACAGTGAATTTTTCTC 57.139 37.500 0.00 0.00 33.42 2.87
47 48 6.591935 TGTGACCTACAGTGAATTTTTCTCT 58.408 36.000 0.00 0.00 33.42 3.10
48 49 7.054124 TGTGACCTACAGTGAATTTTTCTCTT 58.946 34.615 0.00 0.00 33.42 2.85
49 50 7.556275 TGTGACCTACAGTGAATTTTTCTCTTT 59.444 33.333 0.00 0.00 33.42 2.52
50 51 8.406297 GTGACCTACAGTGAATTTTTCTCTTTT 58.594 33.333 0.00 0.00 31.64 2.27
51 52 8.621286 TGACCTACAGTGAATTTTTCTCTTTTC 58.379 33.333 0.00 0.00 31.64 2.29
52 53 8.753497 ACCTACAGTGAATTTTTCTCTTTTCT 57.247 30.769 0.00 0.00 31.64 2.52
53 54 9.190317 ACCTACAGTGAATTTTTCTCTTTTCTT 57.810 29.630 0.00 0.00 31.64 2.52
66 67 8.771920 TTTCTCTTTTCTTTATGATACTCGCA 57.228 30.769 0.00 0.00 0.00 5.10
67 68 8.771920 TTCTCTTTTCTTTATGATACTCGCAA 57.228 30.769 0.00 0.00 0.00 4.85
68 69 8.412608 TCTCTTTTCTTTATGATACTCGCAAG 57.587 34.615 0.00 0.00 0.00 4.01
79 80 3.288484 TCGCAAGATGCTCGTCCT 58.712 55.556 0.43 0.00 45.01 3.85
80 81 2.489040 TCGCAAGATGCTCGTCCTA 58.511 52.632 0.43 0.00 45.01 2.94
81 82 0.100682 TCGCAAGATGCTCGTCCTAC 59.899 55.000 0.43 0.00 45.01 3.18
82 83 1.202973 CGCAAGATGCTCGTCCTACG 61.203 60.000 0.43 0.00 42.25 3.51
83 84 1.483424 GCAAGATGCTCGTCCTACGC 61.483 60.000 0.00 0.00 40.96 4.42
84 85 0.101399 CAAGATGCTCGTCCTACGCT 59.899 55.000 0.00 0.00 42.21 5.07
85 86 1.333931 CAAGATGCTCGTCCTACGCTA 59.666 52.381 0.00 0.00 42.21 4.26
86 87 0.945813 AGATGCTCGTCCTACGCTAC 59.054 55.000 0.00 0.00 42.21 3.58
87 88 0.384477 GATGCTCGTCCTACGCTACG 60.384 60.000 0.00 0.00 42.21 3.51
88 89 1.783031 ATGCTCGTCCTACGCTACGG 61.783 60.000 0.00 0.00 42.21 4.02
89 90 3.020627 CTCGTCCTACGCTACGGG 58.979 66.667 0.00 0.00 42.21 5.28
90 91 1.522355 CTCGTCCTACGCTACGGGA 60.522 63.158 0.00 0.00 42.18 5.14
91 92 0.883814 CTCGTCCTACGCTACGGGAT 60.884 60.000 0.00 0.00 42.18 3.85
92 93 0.882042 TCGTCCTACGCTACGGGATC 60.882 60.000 0.00 0.00 42.21 3.36
93 94 1.162181 CGTCCTACGCTACGGGATCA 61.162 60.000 0.00 0.00 33.65 2.92
94 95 0.310232 GTCCTACGCTACGGGATCAC 59.690 60.000 0.00 0.00 0.00 3.06
95 96 0.107066 TCCTACGCTACGGGATCACA 60.107 55.000 0.00 0.00 0.00 3.58
96 97 0.742505 CCTACGCTACGGGATCACAA 59.257 55.000 0.00 0.00 0.00 3.33
97 98 1.135527 CCTACGCTACGGGATCACAAA 59.864 52.381 0.00 0.00 0.00 2.83
98 99 2.223971 CCTACGCTACGGGATCACAAAT 60.224 50.000 0.00 0.00 0.00 2.32
99 100 1.651987 ACGCTACGGGATCACAAATG 58.348 50.000 0.00 0.00 0.00 2.32
100 101 1.206132 ACGCTACGGGATCACAAATGA 59.794 47.619 0.00 0.00 39.83 2.57
121 122 3.708403 TCAGCATGACATTGTTCTCCT 57.292 42.857 0.00 0.00 42.56 3.69
122 123 4.824479 TCAGCATGACATTGTTCTCCTA 57.176 40.909 0.00 0.00 42.56 2.94
123 124 5.164620 TCAGCATGACATTGTTCTCCTAA 57.835 39.130 0.00 0.00 42.56 2.69
124 125 5.748402 TCAGCATGACATTGTTCTCCTAAT 58.252 37.500 0.00 0.00 42.56 1.73
125 126 6.182627 TCAGCATGACATTGTTCTCCTAATT 58.817 36.000 0.00 0.00 42.56 1.40
126 127 6.660521 TCAGCATGACATTGTTCTCCTAATTT 59.339 34.615 0.00 0.00 42.56 1.82
127 128 7.828717 TCAGCATGACATTGTTCTCCTAATTTA 59.171 33.333 0.00 0.00 42.56 1.40
128 129 8.461222 CAGCATGACATTGTTCTCCTAATTTAA 58.539 33.333 0.00 0.00 39.69 1.52
129 130 8.680903 AGCATGACATTGTTCTCCTAATTTAAG 58.319 33.333 0.00 0.00 0.00 1.85
130 131 8.462016 GCATGACATTGTTCTCCTAATTTAAGT 58.538 33.333 0.00 0.00 0.00 2.24
131 132 9.778993 CATGACATTGTTCTCCTAATTTAAGTG 57.221 33.333 0.00 0.00 0.00 3.16
132 133 8.335532 TGACATTGTTCTCCTAATTTAAGTGG 57.664 34.615 0.00 0.00 0.00 4.00
133 134 7.942341 TGACATTGTTCTCCTAATTTAAGTGGT 59.058 33.333 0.00 0.00 0.00 4.16
134 135 9.444600 GACATTGTTCTCCTAATTTAAGTGGTA 57.555 33.333 0.00 0.00 0.00 3.25
135 136 9.802039 ACATTGTTCTCCTAATTTAAGTGGTAA 57.198 29.630 0.00 0.00 0.00 2.85
148 149 8.649973 ATTTAAGTGGTAATCAAGAGATCGAC 57.350 34.615 0.00 0.00 31.90 4.20
149 150 4.294416 AGTGGTAATCAAGAGATCGACG 57.706 45.455 0.00 0.00 31.90 5.12
150 151 3.945921 AGTGGTAATCAAGAGATCGACGA 59.054 43.478 0.00 0.00 31.90 4.20
151 152 4.398358 AGTGGTAATCAAGAGATCGACGAA 59.602 41.667 0.00 0.00 31.90 3.85
152 153 4.499758 GTGGTAATCAAGAGATCGACGAAC 59.500 45.833 0.00 0.00 31.90 3.95
153 154 3.724751 GGTAATCAAGAGATCGACGAACG 59.275 47.826 0.00 0.00 44.09 3.95
163 164 2.982919 TCGACGAACGACAACAAAAG 57.017 45.000 0.00 0.00 46.45 2.27
164 165 2.261345 TCGACGAACGACAACAAAAGT 58.739 42.857 0.00 0.00 46.45 2.66
165 166 3.433709 TCGACGAACGACAACAAAAGTA 58.566 40.909 0.00 0.00 46.45 2.24
166 167 3.483196 TCGACGAACGACAACAAAAGTAG 59.517 43.478 0.00 0.00 46.45 2.57
167 168 3.483196 CGACGAACGACAACAAAAGTAGA 59.517 43.478 0.14 0.00 45.77 2.59
168 169 4.602524 CGACGAACGACAACAAAAGTAGAC 60.603 45.833 0.14 0.00 45.77 2.59
169 170 4.175516 ACGAACGACAACAAAAGTAGACA 58.824 39.130 0.14 0.00 0.00 3.41
170 171 4.807304 ACGAACGACAACAAAAGTAGACAT 59.193 37.500 0.14 0.00 0.00 3.06
171 172 5.292589 ACGAACGACAACAAAAGTAGACATT 59.707 36.000 0.14 0.00 0.00 2.71
172 173 5.615581 CGAACGACAACAAAAGTAGACATTG 59.384 40.000 0.00 0.00 0.00 2.82
173 174 6.508880 CGAACGACAACAAAAGTAGACATTGA 60.509 38.462 0.00 0.00 0.00 2.57
174 175 6.861065 ACGACAACAAAAGTAGACATTGAT 57.139 33.333 0.00 0.00 0.00 2.57
175 176 6.888430 ACGACAACAAAAGTAGACATTGATC 58.112 36.000 0.00 0.00 0.00 2.92
176 177 6.481976 ACGACAACAAAAGTAGACATTGATCA 59.518 34.615 0.00 0.00 0.00 2.92
177 178 7.011950 ACGACAACAAAAGTAGACATTGATCAA 59.988 33.333 11.26 11.26 0.00 2.57
178 179 7.855409 CGACAACAAAAGTAGACATTGATCAAA 59.145 33.333 13.09 0.00 0.00 2.69
179 180 9.173939 GACAACAAAAGTAGACATTGATCAAAG 57.826 33.333 13.09 10.92 0.00 2.77
180 181 7.649306 ACAACAAAAGTAGACATTGATCAAAGC 59.351 33.333 13.09 4.92 0.00 3.51
181 182 6.373779 ACAAAAGTAGACATTGATCAAAGCG 58.626 36.000 13.09 6.78 0.00 4.68
182 183 6.204688 ACAAAAGTAGACATTGATCAAAGCGA 59.795 34.615 13.09 0.00 0.00 4.93
183 184 5.786401 AAGTAGACATTGATCAAAGCGAC 57.214 39.130 13.09 10.67 0.00 5.19
184 185 4.184629 AGTAGACATTGATCAAAGCGACC 58.815 43.478 13.09 0.08 0.00 4.79
185 186 3.340814 AGACATTGATCAAAGCGACCT 57.659 42.857 13.09 1.43 0.00 3.85
186 187 3.679389 AGACATTGATCAAAGCGACCTT 58.321 40.909 13.09 0.00 0.00 3.50
187 188 4.832248 AGACATTGATCAAAGCGACCTTA 58.168 39.130 13.09 0.00 0.00 2.69
188 189 5.431765 AGACATTGATCAAAGCGACCTTAT 58.568 37.500 13.09 0.00 0.00 1.73
189 190 6.582636 AGACATTGATCAAAGCGACCTTATA 58.417 36.000 13.09 0.00 0.00 0.98
190 191 7.220030 AGACATTGATCAAAGCGACCTTATAT 58.780 34.615 13.09 0.00 0.00 0.86
191 192 7.716998 AGACATTGATCAAAGCGACCTTATATT 59.283 33.333 13.09 0.00 0.00 1.28
192 193 7.642669 ACATTGATCAAAGCGACCTTATATTG 58.357 34.615 13.09 3.42 0.00 1.90
193 194 7.283127 ACATTGATCAAAGCGACCTTATATTGT 59.717 33.333 13.09 4.07 0.00 2.71
194 195 7.624360 TTGATCAAAGCGACCTTATATTGTT 57.376 32.000 5.45 0.00 0.00 2.83
195 196 7.015226 TGATCAAAGCGACCTTATATTGTTG 57.985 36.000 0.00 0.00 0.00 3.33
196 197 6.821160 TGATCAAAGCGACCTTATATTGTTGA 59.179 34.615 0.00 0.00 0.00 3.18
197 198 6.417191 TCAAAGCGACCTTATATTGTTGAC 57.583 37.500 0.00 0.00 0.00 3.18
198 199 5.935206 TCAAAGCGACCTTATATTGTTGACA 59.065 36.000 0.00 0.00 0.00 3.58
199 200 6.428465 TCAAAGCGACCTTATATTGTTGACAA 59.572 34.615 0.00 0.00 40.51 3.18
200 201 6.422776 AAGCGACCTTATATTGTTGACAAG 57.577 37.500 2.77 0.00 39.47 3.16
201 202 5.488341 AGCGACCTTATATTGTTGACAAGT 58.512 37.500 2.77 0.00 39.47 3.16
202 203 5.351465 AGCGACCTTATATTGTTGACAAGTG 59.649 40.000 2.77 0.00 39.47 3.16
203 204 5.560148 CGACCTTATATTGTTGACAAGTGC 58.440 41.667 2.77 0.00 39.47 4.40
204 205 5.121611 CGACCTTATATTGTTGACAAGTGCA 59.878 40.000 2.77 0.00 39.47 4.57
205 206 6.254281 ACCTTATATTGTTGACAAGTGCAC 57.746 37.500 9.40 9.40 39.47 4.57
206 207 5.767665 ACCTTATATTGTTGACAAGTGCACA 59.232 36.000 21.04 0.00 39.47 4.57
207 208 6.264292 ACCTTATATTGTTGACAAGTGCACAA 59.736 34.615 21.04 0.33 39.47 3.33
208 209 7.039784 ACCTTATATTGTTGACAAGTGCACAAT 60.040 33.333 21.04 9.70 39.47 2.71
209 210 7.485913 CCTTATATTGTTGACAAGTGCACAATC 59.514 37.037 21.04 13.38 39.47 2.67
210 211 4.652421 ATTGTTGACAAGTGCACAATCA 57.348 36.364 21.04 15.88 39.47 2.57
211 212 4.446994 TTGTTGACAAGTGCACAATCAA 57.553 36.364 21.04 20.53 0.00 2.57
212 213 4.446994 TGTTGACAAGTGCACAATCAAA 57.553 36.364 23.69 15.04 31.45 2.69
213 214 4.172505 TGTTGACAAGTGCACAATCAAAC 58.827 39.130 23.69 19.01 31.45 2.93
214 215 4.172505 GTTGACAAGTGCACAATCAAACA 58.827 39.130 23.69 11.24 31.45 2.83
215 216 4.652421 TGACAAGTGCACAATCAAACAT 57.348 36.364 21.04 0.00 0.00 2.71
216 217 5.764487 TGACAAGTGCACAATCAAACATA 57.236 34.783 21.04 0.00 0.00 2.29
217 218 6.330004 TGACAAGTGCACAATCAAACATAT 57.670 33.333 21.04 0.00 0.00 1.78
218 219 6.151004 TGACAAGTGCACAATCAAACATATG 58.849 36.000 21.04 0.00 0.00 1.78
219 220 6.088016 ACAAGTGCACAATCAAACATATGT 57.912 33.333 21.04 1.41 0.00 2.29
220 221 6.514947 ACAAGTGCACAATCAAACATATGTT 58.485 32.000 21.04 15.47 40.50 2.71
222 223 7.495279 ACAAGTGCACAATCAAACATATGTTTT 59.505 29.630 27.33 14.18 45.07 2.43
223 224 8.336806 CAAGTGCACAATCAAACATATGTTTTT 58.663 29.630 27.33 18.66 45.07 1.94
245 246 6.439675 TTTTACGAAAGGTATATGCCCAAC 57.560 37.500 6.18 0.00 0.00 3.77
246 247 3.926058 ACGAAAGGTATATGCCCAACT 57.074 42.857 6.18 0.00 0.00 3.16
247 248 4.230745 ACGAAAGGTATATGCCCAACTT 57.769 40.909 6.18 0.00 0.00 2.66
248 249 4.196971 ACGAAAGGTATATGCCCAACTTC 58.803 43.478 6.18 4.28 0.00 3.01
249 250 4.196193 CGAAAGGTATATGCCCAACTTCA 58.804 43.478 6.18 0.00 0.00 3.02
250 251 4.821805 CGAAAGGTATATGCCCAACTTCAT 59.178 41.667 6.18 0.00 0.00 2.57
251 252 5.995282 CGAAAGGTATATGCCCAACTTCATA 59.005 40.000 6.18 0.00 0.00 2.15
252 253 6.147821 CGAAAGGTATATGCCCAACTTCATAG 59.852 42.308 6.18 0.00 0.00 2.23
253 254 6.763715 AAGGTATATGCCCAACTTCATAGA 57.236 37.500 6.18 0.00 0.00 1.98
254 255 6.959606 AGGTATATGCCCAACTTCATAGAT 57.040 37.500 6.18 0.00 0.00 1.98
255 256 8.449423 AAGGTATATGCCCAACTTCATAGATA 57.551 34.615 6.18 0.00 0.00 1.98
256 257 8.629821 AGGTATATGCCCAACTTCATAGATAT 57.370 34.615 6.18 0.00 0.00 1.63
257 258 9.729550 AGGTATATGCCCAACTTCATAGATATA 57.270 33.333 6.18 0.00 0.00 0.86
262 263 7.817418 TGCCCAACTTCATAGATATAAAACC 57.183 36.000 0.00 0.00 0.00 3.27
263 264 7.582719 TGCCCAACTTCATAGATATAAAACCT 58.417 34.615 0.00 0.00 0.00 3.50
264 265 8.719596 TGCCCAACTTCATAGATATAAAACCTA 58.280 33.333 0.00 0.00 0.00 3.08
265 266 9.569122 GCCCAACTTCATAGATATAAAACCTAA 57.431 33.333 0.00 0.00 0.00 2.69
272 273 9.754382 TTCATAGATATAAAACCTAACGACACC 57.246 33.333 0.00 0.00 0.00 4.16
273 274 8.916062 TCATAGATATAAAACCTAACGACACCA 58.084 33.333 0.00 0.00 0.00 4.17
274 275 9.537192 CATAGATATAAAACCTAACGACACCAA 57.463 33.333 0.00 0.00 0.00 3.67
275 276 7.838771 AGATATAAAACCTAACGACACCAAC 57.161 36.000 0.00 0.00 0.00 3.77
276 277 6.820152 AGATATAAAACCTAACGACACCAACC 59.180 38.462 0.00 0.00 0.00 3.77
277 278 2.713863 AAACCTAACGACACCAACCA 57.286 45.000 0.00 0.00 0.00 3.67
278 279 2.713863 AACCTAACGACACCAACCAA 57.286 45.000 0.00 0.00 0.00 3.67
279 280 2.713863 ACCTAACGACACCAACCAAA 57.286 45.000 0.00 0.00 0.00 3.28
280 281 2.567985 ACCTAACGACACCAACCAAAG 58.432 47.619 0.00 0.00 0.00 2.77
281 282 2.092807 ACCTAACGACACCAACCAAAGT 60.093 45.455 0.00 0.00 0.00 2.66
282 283 2.946990 CCTAACGACACCAACCAAAGTT 59.053 45.455 0.00 0.00 36.33 2.66
283 284 3.002965 CCTAACGACACCAACCAAAGTTC 59.997 47.826 0.00 0.00 32.45 3.01
284 285 2.116827 ACGACACCAACCAAAGTTCA 57.883 45.000 0.00 0.00 32.45 3.18
285 286 2.438411 ACGACACCAACCAAAGTTCAA 58.562 42.857 0.00 0.00 32.45 2.69
286 287 2.820787 ACGACACCAACCAAAGTTCAAA 59.179 40.909 0.00 0.00 32.45 2.69
287 288 3.175929 CGACACCAACCAAAGTTCAAAC 58.824 45.455 0.00 0.00 32.45 2.93
288 289 3.517602 GACACCAACCAAAGTTCAAACC 58.482 45.455 0.00 0.00 32.45 3.27
289 290 2.900546 ACACCAACCAAAGTTCAAACCA 59.099 40.909 0.00 0.00 32.45 3.67
290 291 3.325135 ACACCAACCAAAGTTCAAACCAA 59.675 39.130 0.00 0.00 32.45 3.67
291 292 3.682377 CACCAACCAAAGTTCAAACCAAC 59.318 43.478 0.00 0.00 32.45 3.77
292 293 3.325135 ACCAACCAAAGTTCAAACCAACA 59.675 39.130 0.00 0.00 32.45 3.33
293 294 4.202367 ACCAACCAAAGTTCAAACCAACAA 60.202 37.500 0.00 0.00 32.45 2.83
294 295 4.153296 CCAACCAAAGTTCAAACCAACAAC 59.847 41.667 0.00 0.00 32.45 3.32
295 296 4.608948 ACCAAAGTTCAAACCAACAACA 57.391 36.364 0.00 0.00 0.00 3.33
296 297 4.311606 ACCAAAGTTCAAACCAACAACAC 58.688 39.130 0.00 0.00 0.00 3.32
297 298 3.366422 CCAAAGTTCAAACCAACAACACG 59.634 43.478 0.00 0.00 0.00 4.49
298 299 4.230657 CAAAGTTCAAACCAACAACACGA 58.769 39.130 0.00 0.00 0.00 4.35
299 300 3.757745 AGTTCAAACCAACAACACGAG 57.242 42.857 0.00 0.00 0.00 4.18
300 301 3.340034 AGTTCAAACCAACAACACGAGA 58.660 40.909 0.00 0.00 0.00 4.04
301 302 3.945285 AGTTCAAACCAACAACACGAGAT 59.055 39.130 0.00 0.00 0.00 2.75
302 303 4.035208 AGTTCAAACCAACAACACGAGATC 59.965 41.667 0.00 0.00 0.00 2.75
303 304 3.536570 TCAAACCAACAACACGAGATCA 58.463 40.909 0.00 0.00 0.00 2.92
304 305 3.942115 TCAAACCAACAACACGAGATCAA 59.058 39.130 0.00 0.00 0.00 2.57
305 306 4.396478 TCAAACCAACAACACGAGATCAAA 59.604 37.500 0.00 0.00 0.00 2.69
306 307 5.067153 TCAAACCAACAACACGAGATCAAAT 59.933 36.000 0.00 0.00 0.00 2.32
307 308 4.749245 ACCAACAACACGAGATCAAATC 57.251 40.909 0.00 0.00 0.00 2.17
308 309 3.502211 ACCAACAACACGAGATCAAATCC 59.498 43.478 0.00 0.00 0.00 3.01
309 310 3.119849 CCAACAACACGAGATCAAATCCC 60.120 47.826 0.00 0.00 0.00 3.85
310 311 2.346803 ACAACACGAGATCAAATCCCG 58.653 47.619 0.00 0.00 36.52 5.14
311 312 1.665679 CAACACGAGATCAAATCCCGG 59.334 52.381 0.00 0.00 34.60 5.73
312 313 0.462047 ACACGAGATCAAATCCCGGC 60.462 55.000 0.00 0.00 34.60 6.13
313 314 1.146263 ACGAGATCAAATCCCGGCC 59.854 57.895 0.00 0.00 34.60 6.13
314 315 1.338136 ACGAGATCAAATCCCGGCCT 61.338 55.000 0.00 0.00 34.60 5.19
315 316 0.679505 CGAGATCAAATCCCGGCCTA 59.320 55.000 0.00 0.00 0.00 3.93
316 317 1.605712 CGAGATCAAATCCCGGCCTAC 60.606 57.143 0.00 0.00 0.00 3.18
317 318 0.393077 AGATCAAATCCCGGCCTACG 59.607 55.000 0.00 0.00 43.80 3.51
331 332 2.544267 GGCCTACGAATGACACAATAGC 59.456 50.000 0.00 0.00 0.00 2.97
332 333 3.194861 GCCTACGAATGACACAATAGCA 58.805 45.455 0.00 0.00 0.00 3.49
333 334 3.621268 GCCTACGAATGACACAATAGCAA 59.379 43.478 0.00 0.00 0.00 3.91
334 335 4.494199 GCCTACGAATGACACAATAGCAAC 60.494 45.833 0.00 0.00 0.00 4.17
335 336 4.629634 CCTACGAATGACACAATAGCAACA 59.370 41.667 0.00 0.00 0.00 3.33
336 337 5.121611 CCTACGAATGACACAATAGCAACAA 59.878 40.000 0.00 0.00 0.00 2.83
337 338 5.431420 ACGAATGACACAATAGCAACAAA 57.569 34.783 0.00 0.00 0.00 2.83
338 339 5.212194 ACGAATGACACAATAGCAACAAAC 58.788 37.500 0.00 0.00 0.00 2.93
339 340 4.318071 CGAATGACACAATAGCAACAAACG 59.682 41.667 0.00 0.00 0.00 3.60
340 341 5.431420 AATGACACAATAGCAACAAACGA 57.569 34.783 0.00 0.00 0.00 3.85
341 342 4.884458 TGACACAATAGCAACAAACGAA 57.116 36.364 0.00 0.00 0.00 3.85
342 343 4.843147 TGACACAATAGCAACAAACGAAG 58.157 39.130 0.00 0.00 0.00 3.79
343 344 4.572795 TGACACAATAGCAACAAACGAAGA 59.427 37.500 0.00 0.00 0.00 2.87
344 345 5.095691 ACACAATAGCAACAAACGAAGAG 57.904 39.130 0.00 0.00 0.00 2.85
345 346 4.024048 ACACAATAGCAACAAACGAAGAGG 60.024 41.667 0.00 0.00 0.00 3.69
346 347 3.058224 ACAATAGCAACAAACGAAGAGGC 60.058 43.478 0.00 0.00 0.00 4.70
347 348 1.519408 TAGCAACAAACGAAGAGGCC 58.481 50.000 0.00 0.00 0.00 5.19
348 349 1.172812 AGCAACAAACGAAGAGGCCC 61.173 55.000 0.00 0.00 0.00 5.80
349 350 1.574428 CAACAAACGAAGAGGCCCG 59.426 57.895 0.00 0.00 0.00 6.13
350 351 2.258726 AACAAACGAAGAGGCCCGC 61.259 57.895 0.00 0.00 0.00 6.13
351 352 2.668212 CAAACGAAGAGGCCCGCA 60.668 61.111 0.00 0.00 0.00 5.69
352 353 2.040544 CAAACGAAGAGGCCCGCAT 61.041 57.895 0.00 0.00 0.00 4.73
353 354 2.040544 AAACGAAGAGGCCCGCATG 61.041 57.895 0.00 0.00 0.00 4.06
363 364 2.847234 CCCGCATGCCCCTACCTA 60.847 66.667 13.15 0.00 0.00 3.08
364 365 2.426023 CCGCATGCCCCTACCTAC 59.574 66.667 13.15 0.00 0.00 3.18
365 366 2.029073 CGCATGCCCCTACCTACG 59.971 66.667 13.15 0.00 0.00 3.51
366 367 2.495409 CGCATGCCCCTACCTACGA 61.495 63.158 13.15 0.00 0.00 3.43
373 374 1.202498 GCCCCTACCTACGAATGACAC 60.202 57.143 0.00 0.00 0.00 3.67
422 424 4.869861 TCTACGTTTTTAAATCCCTACGGC 59.130 41.667 0.00 0.00 33.66 5.68
476 478 4.228912 AGTCGATTTGCAAAACCTCAAG 57.771 40.909 17.19 0.50 0.00 3.02
477 479 3.632145 AGTCGATTTGCAAAACCTCAAGT 59.368 39.130 17.19 0.00 0.00 3.16
479 481 5.298276 AGTCGATTTGCAAAACCTCAAGTAA 59.702 36.000 17.19 0.00 0.00 2.24
486 488 7.517614 TTGCAAAACCTCAAGTAATATGTGA 57.482 32.000 0.00 0.00 0.00 3.58
517 519 1.212688 CAATACACTGCTCCCATCCCA 59.787 52.381 0.00 0.00 0.00 4.37
533 535 4.841246 CCATCCCAAATAGTAGCCTCTACT 59.159 45.833 10.84 10.84 0.00 2.57
555 557 4.435436 CGGCGCCACTCTGCACTA 62.435 66.667 28.98 0.00 0.00 2.74
556 558 2.047274 GGCGCCACTCTGCACTAA 60.047 61.111 24.80 0.00 0.00 2.24
557 559 1.671054 GGCGCCACTCTGCACTAAA 60.671 57.895 24.80 0.00 0.00 1.85
615 617 3.304458 GGGAAAGAAATGCGAAAAGACGT 60.304 43.478 0.00 0.00 35.59 4.34
629 631 8.124199 TGCGAAAAGACGTAAAATAAAGAAGTT 58.876 29.630 0.00 0.00 35.59 2.66
686 696 9.952030 TTTTTAAGTGGAAAGAAAACCAGAAAT 57.048 25.926 0.00 0.00 36.82 2.17
1094 1125 0.537188 CACGTTAGCCTCTCCACCAT 59.463 55.000 0.00 0.00 0.00 3.55
1130 1161 0.914551 CAAAGCGACATCGAGTACGG 59.085 55.000 5.26 0.00 43.02 4.02
1242 1273 2.601868 GACGCCCTCTCCCTCCTA 59.398 66.667 0.00 0.00 0.00 2.94
1588 1622 8.147704 TGATATTAGGTGTAATCAAGCATTCGA 58.852 33.333 0.00 0.00 31.04 3.71
1639 1673 3.641436 TGCTCTTGTAGAACTCTGTTCCA 59.359 43.478 6.80 0.00 0.00 3.53
1715 1749 2.817258 CGGTTTAAGGATTTGCCACTCA 59.183 45.455 0.00 0.00 40.02 3.41
1718 1752 4.280929 GGTTTAAGGATTTGCCACTCAGTT 59.719 41.667 0.00 0.00 40.02 3.16
1720 1754 6.015772 GGTTTAAGGATTTGCCACTCAGTTTA 60.016 38.462 0.00 0.00 40.02 2.01
1721 1755 6.817765 TTAAGGATTTGCCACTCAGTTTAG 57.182 37.500 0.00 0.00 40.02 1.85
1722 1756 4.640771 AGGATTTGCCACTCAGTTTAGA 57.359 40.909 0.00 0.00 40.02 2.10
1725 1759 6.012745 AGGATTTGCCACTCAGTTTAGAATT 58.987 36.000 0.00 0.00 40.02 2.17
1726 1760 6.151817 AGGATTTGCCACTCAGTTTAGAATTC 59.848 38.462 0.00 0.00 40.02 2.17
1727 1761 6.151817 GGATTTGCCACTCAGTTTAGAATTCT 59.848 38.462 13.56 13.56 36.34 2.40
1729 1763 5.489792 TGCCACTCAGTTTAGAATTCTCT 57.510 39.130 12.24 0.00 35.52 3.10
1730 1764 5.482908 TGCCACTCAGTTTAGAATTCTCTC 58.517 41.667 12.24 3.93 32.70 3.20
1731 1765 5.247110 TGCCACTCAGTTTAGAATTCTCTCT 59.753 40.000 12.24 6.22 32.70 3.10
1811 1854 5.187967 TGTTTGTAAACCCATTTTGAGTGGT 59.812 36.000 5.15 0.00 38.11 4.16
1819 1862 4.126437 CCCATTTTGAGTGGTTTGGTTTC 58.874 43.478 0.00 0.00 34.87 2.78
1863 1906 2.749076 GGTATTGCAGTGAATGTGAGCA 59.251 45.455 0.00 0.00 0.00 4.26
1880 1923 5.070446 TGTGAGCAAAGGGACTAGGTATATG 59.930 44.000 0.00 0.00 38.49 1.78
1901 1944 3.135712 TGACCAGCAACAGAGTAAAGGAA 59.864 43.478 0.00 0.00 0.00 3.36
1903 1946 2.485814 CCAGCAACAGAGTAAAGGAAGC 59.514 50.000 0.00 0.00 0.00 3.86
1904 1947 3.141398 CAGCAACAGAGTAAAGGAAGCA 58.859 45.455 0.00 0.00 0.00 3.91
1912 1955 7.299246 ACAGAGTAAAGGAAGCACTTACTTA 57.701 36.000 8.28 0.00 42.60 2.24
1913 1956 7.908453 ACAGAGTAAAGGAAGCACTTACTTAT 58.092 34.615 8.28 2.66 42.60 1.73
1914 1957 7.819900 ACAGAGTAAAGGAAGCACTTACTTATG 59.180 37.037 8.28 5.84 42.60 1.90
1915 1958 7.278868 CAGAGTAAAGGAAGCACTTACTTATGG 59.721 40.741 8.28 0.00 42.60 2.74
1916 1959 5.880887 AGTAAAGGAAGCACTTACTTATGGC 59.119 40.000 8.28 0.62 42.60 4.40
1917 1960 4.301072 AAGGAAGCACTTACTTATGGCA 57.699 40.909 6.06 0.00 41.68 4.92
2014 2061 5.756347 TGTGTTAGTGAAGTGGACACATAAC 59.244 40.000 5.14 0.00 43.82 1.89
2027 2074 5.070446 TGGACACATAACTCTGAGAACAAGT 59.930 40.000 12.44 2.69 0.00 3.16
2035 2082 9.442047 CATAACTCTGAGAACAAGTAAAGGATT 57.558 33.333 12.44 0.00 0.00 3.01
2184 2231 7.165812 GTGACATTCGACATATTTTGTTATGCC 59.834 37.037 0.00 0.00 39.18 4.40
2522 2569 4.243007 AGTGATTGCCTGCTTGTAAAAC 57.757 40.909 0.00 0.00 0.00 2.43
2548 2595 7.592938 TGTTGTTGACATAAGAAGCTTTATGG 58.407 34.615 18.13 4.42 42.59 2.74
2563 2610 4.501571 GCTTTATGGCTCGTCTTCATAGGA 60.502 45.833 0.00 0.00 0.00 2.94
2656 2703 6.981559 GTGCTTGGTTCAATTTACTTTGGTTA 59.018 34.615 0.00 0.00 0.00 2.85
2722 2769 8.814038 AAACTTAGCATCTGGATTATTGAGTT 57.186 30.769 0.00 0.00 0.00 3.01
2754 2801 9.851686 TTGTTGCTGTCATAAATCCTATATTCT 57.148 29.630 0.00 0.00 0.00 2.40
2756 2803 9.494271 GTTGCTGTCATAAATCCTATATTCTCA 57.506 33.333 0.00 0.00 0.00 3.27
2983 3030 7.490402 CCATGCTTCTTTCATTGTAAGGATTTC 59.510 37.037 3.57 0.00 28.89 2.17
3078 3125 4.587262 GGTTTAAAGTGGAAGTGGACCAAT 59.413 41.667 0.00 0.00 39.22 3.16
3233 3280 3.845781 AATATCTTCACCGATGTGGCT 57.154 42.857 0.00 0.00 43.94 4.75
3490 3537 2.338809 TGTGGATGAAGGTCTCCAACT 58.661 47.619 0.00 0.00 42.99 3.16
3564 3611 1.255667 TGAGGAAGCACGGGAGGTAC 61.256 60.000 0.00 0.00 0.00 3.34
3845 3892 6.700352 CCAAGGTTTGATTAAACATGGATGT 58.300 36.000 22.36 0.00 46.97 3.06
3875 3922 7.540400 CCACGAGCTTTAGAGTATTATGATGAG 59.460 40.741 0.00 0.00 0.00 2.90
3983 4030 5.767168 AGGAGCAGGCAAATACAATCTTATC 59.233 40.000 0.00 0.00 0.00 1.75
4025 4072 3.485463 ACAAGACGGACAAGAATTCCA 57.515 42.857 0.65 0.00 31.94 3.53
4042 4089 8.442632 AGAATTCCATAATACATGTGTCACTG 57.557 34.615 9.11 3.01 0.00 3.66
4043 4090 8.049117 AGAATTCCATAATACATGTGTCACTGT 58.951 33.333 9.11 8.59 0.00 3.55
4044 4091 8.579850 AATTCCATAATACATGTGTCACTGTT 57.420 30.769 9.11 0.00 0.00 3.16
4045 4092 9.679661 AATTCCATAATACATGTGTCACTGTTA 57.320 29.630 9.11 0.00 0.00 2.41
4046 4093 9.679661 ATTCCATAATACATGTGTCACTGTTAA 57.320 29.630 9.11 0.00 0.00 2.01
4047 4094 8.487313 TCCATAATACATGTGTCACTGTTAAC 57.513 34.615 9.11 0.00 0.00 2.01
4048 4095 8.097662 TCCATAATACATGTGTCACTGTTAACA 58.902 33.333 9.11 8.28 0.00 2.41
4109 4156 7.982761 AATGGTAAATGCAAACAAATGTGAT 57.017 28.000 0.00 0.00 0.00 3.06
4161 4208 4.620723 TGCTCCTGAATCCTCCTAACTAA 58.379 43.478 0.00 0.00 0.00 2.24
4162 4209 4.406003 TGCTCCTGAATCCTCCTAACTAAC 59.594 45.833 0.00 0.00 0.00 2.34
4163 4210 4.500035 GCTCCTGAATCCTCCTAACTAACG 60.500 50.000 0.00 0.00 0.00 3.18
4220 4349 5.502220 GCTTCTTCTGAAATGATTCGCTCTC 60.502 44.000 0.00 0.00 38.46 3.20
4241 4370 1.075970 GGGATTTTCCTCAGGGGCC 60.076 63.158 0.00 0.00 36.57 5.80
4263 4392 5.615984 GCCGAGTTTCGAAAAATGTACATGA 60.616 40.000 13.10 0.00 43.74 3.07
4270 4399 6.031549 TCGAAAAATGTACATGATGTAGCG 57.968 37.500 9.63 7.58 32.84 4.26
4278 4407 3.747099 ACATGATGTAGCGTCAAAAGC 57.253 42.857 0.00 0.00 32.88 3.51
4317 4446 3.437049 GGTCATGGTTCTTAGTGTTCTGC 59.563 47.826 0.00 0.00 0.00 4.26
4331 4460 5.646606 AGTGTTCTGCGTTTTAAACATGTT 58.353 33.333 4.92 4.92 34.45 2.71
4332 4461 6.787225 AGTGTTCTGCGTTTTAAACATGTTA 58.213 32.000 12.39 0.00 34.45 2.41
4389 4518 6.069905 TCCCAGAATTACAGGTATTGCAGTAA 60.070 38.462 0.00 0.00 0.00 2.24
4409 4538 4.657814 AAGCAGAGGAACTGGGATTTTA 57.342 40.909 0.00 0.00 45.82 1.52
4448 4583 4.715297 TCCTGTTAGAGGGTCCTTGATTAC 59.285 45.833 0.00 0.00 43.06 1.89
4463 4598 6.312918 TCCTTGATTACAGCGATCAACTAAAC 59.687 38.462 0.00 0.00 38.29 2.01
4549 4685 4.942761 AAGTTGGTCACATGAAAAGCAT 57.057 36.364 0.00 0.00 37.85 3.79
4550 4686 7.517614 TTAAGTTGGTCACATGAAAAGCATA 57.482 32.000 0.00 0.00 34.82 3.14
4551 4687 5.633830 AGTTGGTCACATGAAAAGCATAG 57.366 39.130 0.00 0.00 34.82 2.23
4590 4726 5.379706 AGCAAGTAGGCTCTTGGATATTT 57.620 39.130 20.59 0.00 41.05 1.40
4604 4740 2.497273 GGATATTTGCAGTGGTTGGCTT 59.503 45.455 0.00 0.00 0.00 4.35
4620 4756 1.622232 GCTTCAGAATCGGCAAAAGC 58.378 50.000 0.00 0.00 33.20 3.51
4628 4764 2.185004 ATCGGCAAAAGCTACACAGT 57.815 45.000 0.00 0.00 0.00 3.55
4629 4765 1.961793 TCGGCAAAAGCTACACAGTT 58.038 45.000 0.00 0.00 0.00 3.16
4636 4778 2.464157 AAGCTACACAGTTCCAGCTC 57.536 50.000 0.00 0.00 43.39 4.09
4689 4831 4.210331 AGACAGCACTTGGACAAAGATTT 58.790 39.130 0.00 0.00 39.38 2.17
4727 4869 2.634453 AGAATTGGCAAAAGTTGGGAGG 59.366 45.455 3.01 0.00 0.00 4.30
4738 4880 1.228552 TTGGGAGGCCTGCAAAGAC 60.229 57.895 26.95 8.61 0.00 3.01
4777 4919 0.927537 GCAAACGCAAACTTGTTCCC 59.072 50.000 0.00 0.00 0.00 3.97
4851 4998 5.299782 ACTTTAGTGCCGGTGAAATGTTTTA 59.700 36.000 1.90 0.00 0.00 1.52
4883 5031 6.817765 ATAATAGAAACTGTTGGTGGTGTG 57.182 37.500 0.00 0.00 0.00 3.82
4956 5106 6.748132 AGAAATTCTTTTCAAATCTTCGCCA 58.252 32.000 0.00 0.00 43.09 5.69
4963 5113 6.760770 TCTTTTCAAATCTTCGCCAAAAACAT 59.239 30.769 0.00 0.00 0.00 2.71
4969 5119 7.655328 TCAAATCTTCGCCAAAAACATAAACAT 59.345 29.630 0.00 0.00 0.00 2.71
4986 5136 4.749245 AACATTGCAGAAAGTTAGACCG 57.251 40.909 0.00 0.00 0.00 4.79
5023 5173 2.289547 GGCAAACGTAGCAAAGAGTGAA 59.710 45.455 13.92 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.004752 ACTTGAGCTGGTTGACACTTT 57.995 42.857 0.00 0.00 0.00 2.66
1 2 2.717639 ACTTGAGCTGGTTGACACTT 57.282 45.000 0.00 0.00 0.00 3.16
2 3 2.717639 AACTTGAGCTGGTTGACACT 57.282 45.000 0.00 0.00 0.00 3.55
3 4 3.119495 ACAAAACTTGAGCTGGTTGACAC 60.119 43.478 0.00 0.00 0.00 3.67
4 5 3.088532 ACAAAACTTGAGCTGGTTGACA 58.911 40.909 0.00 0.00 0.00 3.58
5 6 3.128589 TCACAAAACTTGAGCTGGTTGAC 59.871 43.478 0.00 0.00 0.00 3.18
6 7 3.128589 GTCACAAAACTTGAGCTGGTTGA 59.871 43.478 0.00 0.00 0.00 3.18
7 8 3.438360 GTCACAAAACTTGAGCTGGTTG 58.562 45.455 0.00 0.00 0.00 3.77
8 9 2.427095 GGTCACAAAACTTGAGCTGGTT 59.573 45.455 0.00 0.00 38.26 3.67
9 10 2.024414 GGTCACAAAACTTGAGCTGGT 58.976 47.619 0.00 0.00 38.26 4.00
10 11 2.781945 GGTCACAAAACTTGAGCTGG 57.218 50.000 0.00 0.00 38.26 4.85
13 14 3.877508 ACTGTAGGTCACAAAACTTGAGC 59.122 43.478 0.00 0.00 40.99 4.26
14 15 5.116180 TCACTGTAGGTCACAAAACTTGAG 58.884 41.667 0.00 0.00 36.48 3.02
15 16 5.092554 TCACTGTAGGTCACAAAACTTGA 57.907 39.130 0.00 0.00 36.48 3.02
16 17 5.811399 TTCACTGTAGGTCACAAAACTTG 57.189 39.130 0.00 0.00 36.48 3.16
17 18 7.404671 AAATTCACTGTAGGTCACAAAACTT 57.595 32.000 0.00 0.00 36.48 2.66
18 19 7.404671 AAAATTCACTGTAGGTCACAAAACT 57.595 32.000 0.00 0.00 36.48 2.66
19 20 7.973944 AGAAAAATTCACTGTAGGTCACAAAAC 59.026 33.333 0.00 0.00 36.48 2.43
20 21 8.062065 AGAAAAATTCACTGTAGGTCACAAAA 57.938 30.769 0.00 0.00 36.48 2.44
21 22 7.556275 AGAGAAAAATTCACTGTAGGTCACAAA 59.444 33.333 0.00 0.00 36.48 2.83
22 23 7.054124 AGAGAAAAATTCACTGTAGGTCACAA 58.946 34.615 0.00 0.00 36.48 3.33
23 24 6.591935 AGAGAAAAATTCACTGTAGGTCACA 58.408 36.000 0.00 0.00 35.30 3.58
24 25 7.497925 AAGAGAAAAATTCACTGTAGGTCAC 57.502 36.000 0.00 0.00 30.85 3.67
25 26 8.519799 AAAAGAGAAAAATTCACTGTAGGTCA 57.480 30.769 0.00 0.00 30.85 4.02
26 27 8.841300 AGAAAAGAGAAAAATTCACTGTAGGTC 58.159 33.333 0.00 0.00 30.85 3.85
27 28 8.753497 AGAAAAGAGAAAAATTCACTGTAGGT 57.247 30.769 0.00 0.00 30.85 3.08
40 41 9.214957 TGCGAGTATCATAAAGAAAAGAGAAAA 57.785 29.630 0.00 0.00 33.17 2.29
41 42 8.771920 TGCGAGTATCATAAAGAAAAGAGAAA 57.228 30.769 0.00 0.00 33.17 2.52
42 43 8.771920 TTGCGAGTATCATAAAGAAAAGAGAA 57.228 30.769 0.00 0.00 33.17 2.87
43 44 8.251026 TCTTGCGAGTATCATAAAGAAAAGAGA 58.749 33.333 0.00 0.00 33.17 3.10
44 45 8.412608 TCTTGCGAGTATCATAAAGAAAAGAG 57.587 34.615 0.00 0.00 33.17 2.85
45 46 8.820933 CATCTTGCGAGTATCATAAAGAAAAGA 58.179 33.333 0.00 0.00 33.18 2.52
46 47 7.585573 GCATCTTGCGAGTATCATAAAGAAAAG 59.414 37.037 0.00 0.00 33.18 2.27
47 48 7.409697 GCATCTTGCGAGTATCATAAAGAAAA 58.590 34.615 0.00 0.00 33.18 2.29
48 49 6.948353 GCATCTTGCGAGTATCATAAAGAAA 58.052 36.000 0.00 0.00 33.18 2.52
49 50 6.530913 GCATCTTGCGAGTATCATAAAGAA 57.469 37.500 0.00 0.00 33.18 2.52
62 63 3.515170 CGTAGGACGAGCATCTTGCGA 62.515 57.143 0.00 0.00 46.05 5.10
63 64 1.202973 CGTAGGACGAGCATCTTGCG 61.203 60.000 0.00 0.00 46.05 4.85
64 65 1.483424 GCGTAGGACGAGCATCTTGC 61.483 60.000 2.65 0.00 46.05 4.01
65 66 0.101399 AGCGTAGGACGAGCATCTTG 59.899 55.000 2.65 0.00 46.05 3.02
66 67 1.334243 GTAGCGTAGGACGAGCATCTT 59.666 52.381 2.65 0.00 46.05 2.40
67 68 0.945813 GTAGCGTAGGACGAGCATCT 59.054 55.000 2.65 0.00 46.05 2.90
68 69 0.384477 CGTAGCGTAGGACGAGCATC 60.384 60.000 2.65 0.00 46.05 3.91
69 70 1.647629 CGTAGCGTAGGACGAGCAT 59.352 57.895 2.65 0.00 46.05 3.79
70 71 2.466982 CCGTAGCGTAGGACGAGCA 61.467 63.158 2.65 0.00 46.05 4.26
71 72 2.327244 CCGTAGCGTAGGACGAGC 59.673 66.667 2.65 0.00 46.05 5.03
72 73 0.883814 ATCCCGTAGCGTAGGACGAG 60.884 60.000 2.65 0.00 46.05 4.18
73 74 0.882042 GATCCCGTAGCGTAGGACGA 60.882 60.000 2.65 0.00 46.05 4.20
74 75 1.162181 TGATCCCGTAGCGTAGGACG 61.162 60.000 0.00 0.00 45.88 4.79
75 76 0.310232 GTGATCCCGTAGCGTAGGAC 59.690 60.000 0.00 0.00 30.97 3.85
76 77 0.107066 TGTGATCCCGTAGCGTAGGA 60.107 55.000 0.00 0.00 0.00 2.94
77 78 0.742505 TTGTGATCCCGTAGCGTAGG 59.257 55.000 0.00 0.00 0.00 3.18
78 79 2.572191 TTTGTGATCCCGTAGCGTAG 57.428 50.000 0.00 0.00 0.00 3.51
79 80 2.427812 TCATTTGTGATCCCGTAGCGTA 59.572 45.455 0.00 0.00 0.00 4.42
80 81 1.206132 TCATTTGTGATCCCGTAGCGT 59.794 47.619 0.00 0.00 0.00 5.07
81 82 1.934589 TCATTTGTGATCCCGTAGCG 58.065 50.000 0.00 0.00 0.00 4.26
82 83 3.466836 TGATCATTTGTGATCCCGTAGC 58.533 45.455 13.97 0.00 42.88 3.58
83 84 3.496130 GCTGATCATTTGTGATCCCGTAG 59.504 47.826 13.97 7.30 42.88 3.51
84 85 3.118445 TGCTGATCATTTGTGATCCCGTA 60.118 43.478 13.97 4.46 42.88 4.02
85 86 2.292267 GCTGATCATTTGTGATCCCGT 58.708 47.619 13.97 0.00 42.88 5.28
86 87 2.291365 TGCTGATCATTTGTGATCCCG 58.709 47.619 13.97 7.77 42.88 5.14
87 88 3.887110 TCATGCTGATCATTTGTGATCCC 59.113 43.478 13.97 7.33 42.88 3.85
88 89 4.337274 TGTCATGCTGATCATTTGTGATCC 59.663 41.667 13.97 2.88 42.88 3.36
89 90 5.494632 TGTCATGCTGATCATTTGTGATC 57.505 39.130 10.63 10.63 43.59 2.92
90 91 6.127451 ACAATGTCATGCTGATCATTTGTGAT 60.127 34.615 0.00 0.00 31.03 3.06
91 92 5.184287 ACAATGTCATGCTGATCATTTGTGA 59.816 36.000 0.00 0.00 31.03 3.58
92 93 5.407502 ACAATGTCATGCTGATCATTTGTG 58.592 37.500 0.00 0.00 31.03 3.33
93 94 5.654603 ACAATGTCATGCTGATCATTTGT 57.345 34.783 0.00 0.00 31.03 2.83
94 95 6.330278 AGAACAATGTCATGCTGATCATTTG 58.670 36.000 0.00 0.00 31.03 2.32
95 96 6.405508 GGAGAACAATGTCATGCTGATCATTT 60.406 38.462 0.00 0.00 31.03 2.32
96 97 5.067413 GGAGAACAATGTCATGCTGATCATT 59.933 40.000 0.00 0.00 32.45 2.57
97 98 4.579340 GGAGAACAATGTCATGCTGATCAT 59.421 41.667 0.00 0.00 35.31 2.45
98 99 3.943381 GGAGAACAATGTCATGCTGATCA 59.057 43.478 0.00 0.00 0.00 2.92
99 100 4.197750 AGGAGAACAATGTCATGCTGATC 58.802 43.478 0.00 0.00 0.00 2.92
100 101 4.232188 AGGAGAACAATGTCATGCTGAT 57.768 40.909 0.00 0.00 0.00 2.90
101 102 3.708403 AGGAGAACAATGTCATGCTGA 57.292 42.857 0.00 0.00 0.00 4.26
102 103 6.446781 AATTAGGAGAACAATGTCATGCTG 57.553 37.500 2.85 0.00 0.00 4.41
103 104 8.579850 TTAAATTAGGAGAACAATGTCATGCT 57.420 30.769 0.00 0.00 0.00 3.79
104 105 8.462016 ACTTAAATTAGGAGAACAATGTCATGC 58.538 33.333 0.00 0.00 0.00 4.06
105 106 9.778993 CACTTAAATTAGGAGAACAATGTCATG 57.221 33.333 0.00 0.00 0.00 3.07
106 107 8.960591 CCACTTAAATTAGGAGAACAATGTCAT 58.039 33.333 0.00 0.00 0.00 3.06
107 108 7.942341 ACCACTTAAATTAGGAGAACAATGTCA 59.058 33.333 0.00 0.00 0.00 3.58
108 109 8.336801 ACCACTTAAATTAGGAGAACAATGTC 57.663 34.615 0.00 0.00 0.00 3.06
109 110 9.802039 TTACCACTTAAATTAGGAGAACAATGT 57.198 29.630 0.00 0.00 0.00 2.71
122 123 9.099454 GTCGATCTCTTGATTACCACTTAAATT 57.901 33.333 0.00 0.00 32.19 1.82
123 124 7.435488 CGTCGATCTCTTGATTACCACTTAAAT 59.565 37.037 0.00 0.00 32.19 1.40
124 125 6.750501 CGTCGATCTCTTGATTACCACTTAAA 59.249 38.462 0.00 0.00 32.19 1.52
125 126 6.094464 TCGTCGATCTCTTGATTACCACTTAA 59.906 38.462 0.00 0.00 32.19 1.85
126 127 5.587443 TCGTCGATCTCTTGATTACCACTTA 59.413 40.000 0.00 0.00 32.19 2.24
127 128 4.398358 TCGTCGATCTCTTGATTACCACTT 59.602 41.667 0.00 0.00 32.19 3.16
128 129 3.945921 TCGTCGATCTCTTGATTACCACT 59.054 43.478 0.00 0.00 32.19 4.00
129 130 4.288670 TCGTCGATCTCTTGATTACCAC 57.711 45.455 0.00 0.00 32.19 4.16
130 131 4.669318 GTTCGTCGATCTCTTGATTACCA 58.331 43.478 0.00 0.00 32.19 3.25
131 132 3.724751 CGTTCGTCGATCTCTTGATTACC 59.275 47.826 0.00 0.00 42.86 2.85
132 133 4.585364 TCGTTCGTCGATCTCTTGATTAC 58.415 43.478 0.00 0.00 44.01 1.89
133 134 4.870221 TCGTTCGTCGATCTCTTGATTA 57.130 40.909 0.00 0.00 44.01 1.75
134 135 3.759527 TCGTTCGTCGATCTCTTGATT 57.240 42.857 0.00 0.00 44.01 2.57
144 145 2.261345 ACTTTTGTTGTCGTTCGTCGA 58.739 42.857 0.00 0.00 46.83 4.20
145 146 2.706760 ACTTTTGTTGTCGTTCGTCG 57.293 45.000 0.00 0.00 41.41 5.12
146 147 4.266029 TGTCTACTTTTGTTGTCGTTCGTC 59.734 41.667 0.00 0.00 0.00 4.20
147 148 4.175516 TGTCTACTTTTGTTGTCGTTCGT 58.824 39.130 0.00 0.00 0.00 3.85
148 149 4.765281 TGTCTACTTTTGTTGTCGTTCG 57.235 40.909 0.00 0.00 0.00 3.95
149 150 6.711579 TCAATGTCTACTTTTGTTGTCGTTC 58.288 36.000 0.00 0.00 0.00 3.95
150 151 6.671614 TCAATGTCTACTTTTGTTGTCGTT 57.328 33.333 0.00 0.00 0.00 3.85
151 152 6.481976 TGATCAATGTCTACTTTTGTTGTCGT 59.518 34.615 0.00 0.00 0.00 4.34
152 153 6.887368 TGATCAATGTCTACTTTTGTTGTCG 58.113 36.000 0.00 0.00 0.00 4.35
153 154 9.173939 CTTTGATCAATGTCTACTTTTGTTGTC 57.826 33.333 9.40 0.00 0.00 3.18
154 155 7.649306 GCTTTGATCAATGTCTACTTTTGTTGT 59.351 33.333 19.25 0.00 0.00 3.32
155 156 7.149080 CGCTTTGATCAATGTCTACTTTTGTTG 60.149 37.037 19.25 0.00 0.00 3.33
156 157 6.857964 CGCTTTGATCAATGTCTACTTTTGTT 59.142 34.615 19.25 0.00 0.00 2.83
157 158 6.204688 TCGCTTTGATCAATGTCTACTTTTGT 59.795 34.615 19.25 0.00 0.00 2.83
158 159 6.521133 GTCGCTTTGATCAATGTCTACTTTTG 59.479 38.462 19.25 3.28 0.00 2.44
159 160 6.348540 GGTCGCTTTGATCAATGTCTACTTTT 60.349 38.462 19.25 0.00 0.00 2.27
160 161 5.122396 GGTCGCTTTGATCAATGTCTACTTT 59.878 40.000 19.25 0.00 0.00 2.66
161 162 4.631813 GGTCGCTTTGATCAATGTCTACTT 59.368 41.667 19.25 0.00 0.00 2.24
162 163 4.081420 AGGTCGCTTTGATCAATGTCTACT 60.081 41.667 19.25 11.76 0.00 2.57
163 164 4.184629 AGGTCGCTTTGATCAATGTCTAC 58.815 43.478 19.25 14.71 0.00 2.59
164 165 4.471904 AGGTCGCTTTGATCAATGTCTA 57.528 40.909 19.25 0.50 0.00 2.59
165 166 3.340814 AGGTCGCTTTGATCAATGTCT 57.659 42.857 19.25 10.97 0.00 3.41
166 167 5.741388 ATAAGGTCGCTTTGATCAATGTC 57.259 39.130 19.25 12.17 0.00 3.06
167 168 7.283127 ACAATATAAGGTCGCTTTGATCAATGT 59.717 33.333 19.25 8.88 0.00 2.71
168 169 7.642669 ACAATATAAGGTCGCTTTGATCAATG 58.357 34.615 9.40 12.82 0.00 2.82
169 170 7.807977 ACAATATAAGGTCGCTTTGATCAAT 57.192 32.000 9.40 0.00 0.00 2.57
170 171 7.335673 TCAACAATATAAGGTCGCTTTGATCAA 59.664 33.333 3.38 3.38 0.00 2.57
171 172 6.821160 TCAACAATATAAGGTCGCTTTGATCA 59.179 34.615 0.00 0.00 0.00 2.92
172 173 7.126398 GTCAACAATATAAGGTCGCTTTGATC 58.874 38.462 0.00 0.00 0.00 2.92
173 174 6.597672 TGTCAACAATATAAGGTCGCTTTGAT 59.402 34.615 0.00 0.00 0.00 2.57
174 175 5.935206 TGTCAACAATATAAGGTCGCTTTGA 59.065 36.000 0.00 0.00 0.00 2.69
175 176 6.176975 TGTCAACAATATAAGGTCGCTTTG 57.823 37.500 0.00 0.00 0.00 2.77
176 177 6.430000 ACTTGTCAACAATATAAGGTCGCTTT 59.570 34.615 0.00 0.00 35.02 3.51
177 178 5.938125 ACTTGTCAACAATATAAGGTCGCTT 59.062 36.000 0.00 0.00 35.02 4.68
178 179 5.351465 CACTTGTCAACAATATAAGGTCGCT 59.649 40.000 0.00 0.00 35.02 4.93
179 180 5.560148 CACTTGTCAACAATATAAGGTCGC 58.440 41.667 0.00 0.00 35.02 5.19
180 181 5.121611 TGCACTTGTCAACAATATAAGGTCG 59.878 40.000 0.00 0.00 35.02 4.79
181 182 6.072728 TGTGCACTTGTCAACAATATAAGGTC 60.073 38.462 19.41 0.00 35.02 3.85
182 183 5.767665 TGTGCACTTGTCAACAATATAAGGT 59.232 36.000 19.41 0.00 35.02 3.50
183 184 6.252967 TGTGCACTTGTCAACAATATAAGG 57.747 37.500 19.41 0.00 35.02 2.69
184 185 8.022550 TGATTGTGCACTTGTCAACAATATAAG 58.977 33.333 19.41 0.00 35.02 1.73
185 186 7.880105 TGATTGTGCACTTGTCAACAATATAA 58.120 30.769 19.41 0.00 35.02 0.98
186 187 7.446001 TGATTGTGCACTTGTCAACAATATA 57.554 32.000 19.41 0.00 35.02 0.86
187 188 6.330004 TGATTGTGCACTTGTCAACAATAT 57.670 33.333 19.41 0.00 35.02 1.28
188 189 5.764487 TGATTGTGCACTTGTCAACAATA 57.236 34.783 19.41 0.00 35.02 1.90
189 190 4.652421 TGATTGTGCACTTGTCAACAAT 57.348 36.364 19.41 6.51 35.02 2.71
190 191 4.446994 TTGATTGTGCACTTGTCAACAA 57.553 36.364 19.41 11.23 0.00 2.83
191 192 4.172505 GTTTGATTGTGCACTTGTCAACA 58.827 39.130 22.60 14.98 0.00 3.33
192 193 4.172505 TGTTTGATTGTGCACTTGTCAAC 58.827 39.130 22.60 17.54 0.00 3.18
193 194 4.446994 TGTTTGATTGTGCACTTGTCAA 57.553 36.364 19.41 20.05 0.00 3.18
194 195 4.652421 ATGTTTGATTGTGCACTTGTCA 57.348 36.364 19.41 15.60 0.00 3.58
195 196 6.151691 ACATATGTTTGATTGTGCACTTGTC 58.848 36.000 19.41 13.23 0.00 3.18
196 197 6.088016 ACATATGTTTGATTGTGCACTTGT 57.912 33.333 19.41 3.50 0.00 3.16
197 198 7.410800 AAACATATGTTTGATTGTGCACTTG 57.589 32.000 28.59 1.57 45.55 3.16
198 199 8.436046 AAAAACATATGTTTGATTGTGCACTT 57.564 26.923 29.54 15.53 46.47 3.16
221 222 6.660094 AGTTGGGCATATACCTTTCGTAAAAA 59.340 34.615 0.00 0.00 0.00 1.94
222 223 6.181908 AGTTGGGCATATACCTTTCGTAAAA 58.818 36.000 0.00 0.00 0.00 1.52
223 224 5.747342 AGTTGGGCATATACCTTTCGTAAA 58.253 37.500 0.00 0.00 0.00 2.01
224 225 5.362105 AGTTGGGCATATACCTTTCGTAA 57.638 39.130 0.00 0.00 0.00 3.18
225 226 5.104859 TGAAGTTGGGCATATACCTTTCGTA 60.105 40.000 0.00 0.00 0.00 3.43
226 227 3.926058 AGTTGGGCATATACCTTTCGT 57.074 42.857 0.00 0.00 0.00 3.85
227 228 4.196193 TGAAGTTGGGCATATACCTTTCG 58.804 43.478 0.00 0.00 0.00 3.46
228 229 7.224297 TCTATGAAGTTGGGCATATACCTTTC 58.776 38.462 0.00 0.00 0.00 2.62
229 230 7.149202 TCTATGAAGTTGGGCATATACCTTT 57.851 36.000 0.00 0.00 0.00 3.11
230 231 6.763715 TCTATGAAGTTGGGCATATACCTT 57.236 37.500 0.00 0.00 0.00 3.50
231 232 6.959606 ATCTATGAAGTTGGGCATATACCT 57.040 37.500 0.00 0.00 0.00 3.08
236 237 9.515226 GGTTTTATATCTATGAAGTTGGGCATA 57.485 33.333 0.00 0.00 0.00 3.14
237 238 8.227507 AGGTTTTATATCTATGAAGTTGGGCAT 58.772 33.333 0.00 0.00 0.00 4.40
238 239 7.582719 AGGTTTTATATCTATGAAGTTGGGCA 58.417 34.615 0.00 0.00 0.00 5.36
239 240 9.569122 TTAGGTTTTATATCTATGAAGTTGGGC 57.431 33.333 0.00 0.00 0.00 5.36
246 247 9.754382 GGTGTCGTTAGGTTTTATATCTATGAA 57.246 33.333 0.00 0.00 0.00 2.57
247 248 8.916062 TGGTGTCGTTAGGTTTTATATCTATGA 58.084 33.333 0.00 0.00 0.00 2.15
248 249 9.537192 TTGGTGTCGTTAGGTTTTATATCTATG 57.463 33.333 0.00 0.00 0.00 2.23
249 250 9.538508 GTTGGTGTCGTTAGGTTTTATATCTAT 57.461 33.333 0.00 0.00 0.00 1.98
250 251 7.981225 GGTTGGTGTCGTTAGGTTTTATATCTA 59.019 37.037 0.00 0.00 0.00 1.98
251 252 6.820152 GGTTGGTGTCGTTAGGTTTTATATCT 59.180 38.462 0.00 0.00 0.00 1.98
252 253 6.594937 TGGTTGGTGTCGTTAGGTTTTATATC 59.405 38.462 0.00 0.00 0.00 1.63
253 254 6.474630 TGGTTGGTGTCGTTAGGTTTTATAT 58.525 36.000 0.00 0.00 0.00 0.86
254 255 5.862845 TGGTTGGTGTCGTTAGGTTTTATA 58.137 37.500 0.00 0.00 0.00 0.98
255 256 4.716794 TGGTTGGTGTCGTTAGGTTTTAT 58.283 39.130 0.00 0.00 0.00 1.40
256 257 4.148128 TGGTTGGTGTCGTTAGGTTTTA 57.852 40.909 0.00 0.00 0.00 1.52
257 258 3.002038 TGGTTGGTGTCGTTAGGTTTT 57.998 42.857 0.00 0.00 0.00 2.43
258 259 2.713863 TGGTTGGTGTCGTTAGGTTT 57.286 45.000 0.00 0.00 0.00 3.27
259 260 2.713863 TTGGTTGGTGTCGTTAGGTT 57.286 45.000 0.00 0.00 0.00 3.50
260 261 2.092807 ACTTTGGTTGGTGTCGTTAGGT 60.093 45.455 0.00 0.00 0.00 3.08
261 262 2.567985 ACTTTGGTTGGTGTCGTTAGG 58.432 47.619 0.00 0.00 0.00 2.69
262 263 3.623960 TGAACTTTGGTTGGTGTCGTTAG 59.376 43.478 0.00 0.00 35.58 2.34
263 264 3.607741 TGAACTTTGGTTGGTGTCGTTA 58.392 40.909 0.00 0.00 35.58 3.18
264 265 2.438411 TGAACTTTGGTTGGTGTCGTT 58.562 42.857 0.00 0.00 35.58 3.85
265 266 2.116827 TGAACTTTGGTTGGTGTCGT 57.883 45.000 0.00 0.00 35.58 4.34
266 267 3.175929 GTTTGAACTTTGGTTGGTGTCG 58.824 45.455 0.00 0.00 35.58 4.35
267 268 3.056465 TGGTTTGAACTTTGGTTGGTGTC 60.056 43.478 0.00 0.00 35.58 3.67
268 269 2.900546 TGGTTTGAACTTTGGTTGGTGT 59.099 40.909 0.00 0.00 35.58 4.16
269 270 3.601443 TGGTTTGAACTTTGGTTGGTG 57.399 42.857 0.00 0.00 35.58 4.17
270 271 3.325135 TGTTGGTTTGAACTTTGGTTGGT 59.675 39.130 0.00 0.00 35.58 3.67
271 272 3.931578 TGTTGGTTTGAACTTTGGTTGG 58.068 40.909 0.00 0.00 35.58 3.77
272 273 4.752101 TGTTGTTGGTTTGAACTTTGGTTG 59.248 37.500 0.00 0.00 35.58 3.77
273 274 4.752604 GTGTTGTTGGTTTGAACTTTGGTT 59.247 37.500 0.00 0.00 38.52 3.67
274 275 4.311606 GTGTTGTTGGTTTGAACTTTGGT 58.688 39.130 0.00 0.00 0.00 3.67
275 276 3.366422 CGTGTTGTTGGTTTGAACTTTGG 59.634 43.478 0.00 0.00 0.00 3.28
276 277 4.230657 TCGTGTTGTTGGTTTGAACTTTG 58.769 39.130 0.00 0.00 0.00 2.77
277 278 4.216687 TCTCGTGTTGTTGGTTTGAACTTT 59.783 37.500 0.00 0.00 0.00 2.66
278 279 3.754323 TCTCGTGTTGTTGGTTTGAACTT 59.246 39.130 0.00 0.00 0.00 2.66
279 280 3.340034 TCTCGTGTTGTTGGTTTGAACT 58.660 40.909 0.00 0.00 0.00 3.01
280 281 3.750639 TCTCGTGTTGTTGGTTTGAAC 57.249 42.857 0.00 0.00 0.00 3.18
281 282 3.942115 TGATCTCGTGTTGTTGGTTTGAA 59.058 39.130 0.00 0.00 0.00 2.69
282 283 3.536570 TGATCTCGTGTTGTTGGTTTGA 58.463 40.909 0.00 0.00 0.00 2.69
283 284 3.961477 TGATCTCGTGTTGTTGGTTTG 57.039 42.857 0.00 0.00 0.00 2.93
284 285 4.974368 TTTGATCTCGTGTTGTTGGTTT 57.026 36.364 0.00 0.00 0.00 3.27
285 286 4.023193 GGATTTGATCTCGTGTTGTTGGTT 60.023 41.667 0.00 0.00 0.00 3.67
286 287 3.502211 GGATTTGATCTCGTGTTGTTGGT 59.498 43.478 0.00 0.00 0.00 3.67
287 288 3.119849 GGGATTTGATCTCGTGTTGTTGG 60.120 47.826 0.00 0.00 0.00 3.77
288 289 4.083581 GGGATTTGATCTCGTGTTGTTG 57.916 45.455 0.00 0.00 0.00 3.33
297 298 1.605712 CGTAGGCCGGGATTTGATCTC 60.606 57.143 2.18 0.00 0.00 2.75
298 299 0.393077 CGTAGGCCGGGATTTGATCT 59.607 55.000 2.18 0.00 0.00 2.75
299 300 0.391597 TCGTAGGCCGGGATTTGATC 59.608 55.000 2.18 0.00 37.11 2.92
300 301 0.834612 TTCGTAGGCCGGGATTTGAT 59.165 50.000 2.18 0.00 37.11 2.57
301 302 0.834612 ATTCGTAGGCCGGGATTTGA 59.165 50.000 2.18 0.00 37.11 2.69
302 303 0.944386 CATTCGTAGGCCGGGATTTG 59.056 55.000 2.18 0.00 37.11 2.32
303 304 0.834612 TCATTCGTAGGCCGGGATTT 59.165 50.000 2.18 0.00 37.11 2.17
304 305 0.106149 GTCATTCGTAGGCCGGGATT 59.894 55.000 2.18 0.00 37.11 3.01
305 306 1.046472 TGTCATTCGTAGGCCGGGAT 61.046 55.000 2.18 0.00 37.11 3.85
306 307 1.683025 TGTCATTCGTAGGCCGGGA 60.683 57.895 2.18 0.00 37.11 5.14
307 308 1.520787 GTGTCATTCGTAGGCCGGG 60.521 63.158 2.18 0.00 37.11 5.73
308 309 0.390603 TTGTGTCATTCGTAGGCCGG 60.391 55.000 0.00 0.00 37.11 6.13
309 310 1.651987 ATTGTGTCATTCGTAGGCCG 58.348 50.000 0.00 0.00 38.13 6.13
310 311 2.544267 GCTATTGTGTCATTCGTAGGCC 59.456 50.000 0.00 0.00 0.00 5.19
311 312 3.194861 TGCTATTGTGTCATTCGTAGGC 58.805 45.455 0.00 0.00 0.00 3.93
312 313 4.629634 TGTTGCTATTGTGTCATTCGTAGG 59.370 41.667 0.00 0.00 0.00 3.18
313 314 5.778161 TGTTGCTATTGTGTCATTCGTAG 57.222 39.130 0.00 0.00 0.00 3.51
314 315 6.367421 GTTTGTTGCTATTGTGTCATTCGTA 58.633 36.000 0.00 0.00 0.00 3.43
315 316 5.212194 GTTTGTTGCTATTGTGTCATTCGT 58.788 37.500 0.00 0.00 0.00 3.85
316 317 4.318071 CGTTTGTTGCTATTGTGTCATTCG 59.682 41.667 0.00 0.00 0.00 3.34
317 318 5.448438 TCGTTTGTTGCTATTGTGTCATTC 58.552 37.500 0.00 0.00 0.00 2.67
318 319 5.431420 TCGTTTGTTGCTATTGTGTCATT 57.569 34.783 0.00 0.00 0.00 2.57
319 320 5.238432 TCTTCGTTTGTTGCTATTGTGTCAT 59.762 36.000 0.00 0.00 0.00 3.06
320 321 4.572795 TCTTCGTTTGTTGCTATTGTGTCA 59.427 37.500 0.00 0.00 0.00 3.58
321 322 5.090652 TCTTCGTTTGTTGCTATTGTGTC 57.909 39.130 0.00 0.00 0.00 3.67
322 323 4.024048 CCTCTTCGTTTGTTGCTATTGTGT 60.024 41.667 0.00 0.00 0.00 3.72
323 324 4.466828 CCTCTTCGTTTGTTGCTATTGTG 58.533 43.478 0.00 0.00 0.00 3.33
324 325 3.058224 GCCTCTTCGTTTGTTGCTATTGT 60.058 43.478 0.00 0.00 0.00 2.71
325 326 3.492313 GCCTCTTCGTTTGTTGCTATTG 58.508 45.455 0.00 0.00 0.00 1.90
326 327 2.488153 GGCCTCTTCGTTTGTTGCTATT 59.512 45.455 0.00 0.00 0.00 1.73
327 328 2.084546 GGCCTCTTCGTTTGTTGCTAT 58.915 47.619 0.00 0.00 0.00 2.97
328 329 1.519408 GGCCTCTTCGTTTGTTGCTA 58.481 50.000 0.00 0.00 0.00 3.49
329 330 1.172812 GGGCCTCTTCGTTTGTTGCT 61.173 55.000 0.84 0.00 0.00 3.91
330 331 1.285950 GGGCCTCTTCGTTTGTTGC 59.714 57.895 0.84 0.00 0.00 4.17
331 332 1.574428 CGGGCCTCTTCGTTTGTTG 59.426 57.895 0.84 0.00 0.00 3.33
332 333 2.258726 GCGGGCCTCTTCGTTTGTT 61.259 57.895 0.84 0.00 0.00 2.83
333 334 2.668550 GCGGGCCTCTTCGTTTGT 60.669 61.111 0.84 0.00 0.00 2.83
334 335 2.040544 ATGCGGGCCTCTTCGTTTG 61.041 57.895 0.84 0.00 0.00 2.93
335 336 2.040544 CATGCGGGCCTCTTCGTTT 61.041 57.895 0.84 0.00 0.00 3.60
336 337 2.436646 CATGCGGGCCTCTTCGTT 60.437 61.111 0.84 0.00 0.00 3.85
346 347 2.847234 TAGGTAGGGGCATGCGGG 60.847 66.667 12.44 0.00 0.00 6.13
347 348 2.426023 GTAGGTAGGGGCATGCGG 59.574 66.667 12.44 0.00 0.00 5.69
348 349 2.023414 TTCGTAGGTAGGGGCATGCG 62.023 60.000 12.44 0.00 0.00 4.73
349 350 0.396811 ATTCGTAGGTAGGGGCATGC 59.603 55.000 9.90 9.90 0.00 4.06
350 351 1.691976 TCATTCGTAGGTAGGGGCATG 59.308 52.381 0.00 0.00 0.00 4.06
351 352 1.692519 GTCATTCGTAGGTAGGGGCAT 59.307 52.381 0.00 0.00 0.00 4.40
352 353 1.117150 GTCATTCGTAGGTAGGGGCA 58.883 55.000 0.00 0.00 0.00 5.36
353 354 1.117150 TGTCATTCGTAGGTAGGGGC 58.883 55.000 0.00 0.00 0.00 5.80
354 355 1.411612 GGTGTCATTCGTAGGTAGGGG 59.588 57.143 0.00 0.00 0.00 4.79
355 356 2.385803 AGGTGTCATTCGTAGGTAGGG 58.614 52.381 0.00 0.00 0.00 3.53
356 357 5.346522 GTTAAGGTGTCATTCGTAGGTAGG 58.653 45.833 0.00 0.00 0.00 3.18
357 358 5.346522 GGTTAAGGTGTCATTCGTAGGTAG 58.653 45.833 0.00 0.00 0.00 3.18
358 359 4.160252 GGGTTAAGGTGTCATTCGTAGGTA 59.840 45.833 0.00 0.00 0.00 3.08
359 360 3.055602 GGGTTAAGGTGTCATTCGTAGGT 60.056 47.826 0.00 0.00 0.00 3.08
360 361 3.197116 AGGGTTAAGGTGTCATTCGTAGG 59.803 47.826 0.00 0.00 0.00 3.18
361 362 4.467198 AGGGTTAAGGTGTCATTCGTAG 57.533 45.455 0.00 0.00 0.00 3.51
362 363 4.142403 CGTAGGGTTAAGGTGTCATTCGTA 60.142 45.833 0.00 0.00 0.00 3.43
363 364 3.367703 CGTAGGGTTAAGGTGTCATTCGT 60.368 47.826 0.00 0.00 0.00 3.85
364 365 3.184541 CGTAGGGTTAAGGTGTCATTCG 58.815 50.000 0.00 0.00 0.00 3.34
365 366 2.934553 GCGTAGGGTTAAGGTGTCATTC 59.065 50.000 0.00 0.00 0.00 2.67
366 367 2.570302 AGCGTAGGGTTAAGGTGTCATT 59.430 45.455 0.00 0.00 0.00 2.57
373 374 1.407851 GGGGAAAGCGTAGGGTTAAGG 60.408 57.143 0.00 0.00 32.60 2.69
422 424 3.023832 CAACTGTAAGGGCCTATTTGGG 58.976 50.000 6.41 0.00 39.30 4.12
486 488 4.729868 AGCAGTGTATTGGGAAAGAAGTT 58.270 39.130 0.00 0.00 0.00 2.66
517 519 4.674281 GCCACAGTAGAGGCTACTATTT 57.326 45.455 6.78 0.00 46.56 1.40
557 559 9.198837 CCGGTGTTGTAGCTTTAATTTATTTTT 57.801 29.630 0.00 0.00 0.00 1.94
560 562 6.660094 TCCCGGTGTTGTAGCTTTAATTTATT 59.340 34.615 0.00 0.00 0.00 1.40
561 563 6.181908 TCCCGGTGTTGTAGCTTTAATTTAT 58.818 36.000 0.00 0.00 0.00 1.40
562 564 5.558818 TCCCGGTGTTGTAGCTTTAATTTA 58.441 37.500 0.00 0.00 0.00 1.40
567 569 3.404899 CTTTCCCGGTGTTGTAGCTTTA 58.595 45.455 0.00 0.00 0.00 1.85
573 575 1.071071 CAGTCCTTTCCCGGTGTTGTA 59.929 52.381 0.00 0.00 0.00 2.41
580 582 0.322546 CTTTCCCAGTCCTTTCCCGG 60.323 60.000 0.00 0.00 0.00 5.73
660 670 9.952030 ATTTCTGGTTTTCTTTCCACTTAAAAA 57.048 25.926 0.00 0.00 0.00 1.94
664 674 9.416284 ACTAATTTCTGGTTTTCTTTCCACTTA 57.584 29.630 0.00 0.00 0.00 2.24
669 679 8.304596 CCCTTACTAATTTCTGGTTTTCTTTCC 58.695 37.037 0.00 0.00 0.00 3.13
1094 1125 2.089116 TTGGTCGGAGGAGGAGTGGA 62.089 60.000 0.00 0.00 0.00 4.02
1242 1273 0.988063 GGCCAGAAGAGGAGGAAAGT 59.012 55.000 0.00 0.00 0.00 2.66
1586 1620 6.374565 AAAGTACTAGTACTATGCTGGTCG 57.625 41.667 30.89 0.00 44.96 4.79
1588 1622 8.991783 TCATAAAGTACTAGTACTATGCTGGT 57.008 34.615 30.89 14.29 44.96 4.00
1639 1673 7.341805 CCTACATTTATAGAGCCATAGCCAAT 58.658 38.462 0.00 0.00 41.25 3.16
1715 1749 7.449704 ACATTTGGCAAGAGAGAATTCTAAACT 59.550 33.333 8.25 0.91 32.53 2.66
1718 1752 8.862325 TTACATTTGGCAAGAGAGAATTCTAA 57.138 30.769 8.25 0.00 32.53 2.10
1720 1754 6.944862 ACTTACATTTGGCAAGAGAGAATTCT 59.055 34.615 7.95 7.95 36.01 2.40
1721 1755 7.025963 CACTTACATTTGGCAAGAGAGAATTC 58.974 38.462 0.00 0.00 0.00 2.17
1722 1756 6.716628 TCACTTACATTTGGCAAGAGAGAATT 59.283 34.615 0.00 0.00 0.00 2.17
1725 1759 4.997395 GTCACTTACATTTGGCAAGAGAGA 59.003 41.667 0.00 0.00 0.00 3.10
1726 1760 4.999950 AGTCACTTACATTTGGCAAGAGAG 59.000 41.667 0.00 0.00 0.00 3.20
1727 1761 4.973168 AGTCACTTACATTTGGCAAGAGA 58.027 39.130 0.00 0.00 0.00 3.10
1729 1763 4.713553 TGAGTCACTTACATTTGGCAAGA 58.286 39.130 0.00 0.00 0.00 3.02
1730 1764 5.633830 ATGAGTCACTTACATTTGGCAAG 57.366 39.130 0.00 0.00 0.00 4.01
1731 1765 7.701539 AATATGAGTCACTTACATTTGGCAA 57.298 32.000 0.00 0.00 0.00 4.52
1811 1854 4.625607 AACCAAACCAACTGAAACCAAA 57.374 36.364 0.00 0.00 0.00 3.28
1819 1862 3.447229 ACTCCAAGAAACCAAACCAACTG 59.553 43.478 0.00 0.00 0.00 3.16
1880 1923 3.402628 TCCTTTACTCTGTTGCTGGTC 57.597 47.619 0.00 0.00 0.00 4.02
1901 1944 6.978674 TCTAGTATGCCATAAGTAAGTGCT 57.021 37.500 0.00 0.00 0.00 4.40
1903 1946 9.988815 AGATTTCTAGTATGCCATAAGTAAGTG 57.011 33.333 0.00 0.00 0.00 3.16
1912 1955 8.663209 ATCTACTGAGATTTCTAGTATGCCAT 57.337 34.615 0.00 0.00 39.56 4.40
2004 2051 5.542779 ACTTGTTCTCAGAGTTATGTGTCC 58.457 41.667 0.00 0.00 0.00 4.02
2014 2061 8.043710 ACCATAATCCTTTACTTGTTCTCAGAG 58.956 37.037 0.00 0.00 0.00 3.35
2027 2074 5.249622 TCACCAGTGTGACCATAATCCTTTA 59.750 40.000 0.00 0.00 46.40 1.85
2035 2082 4.102524 AGAAAACTCACCAGTGTGACCATA 59.897 41.667 6.84 0.00 46.40 2.74
2184 2231 4.109766 CCACAATAGAAGCAATGCACATG 58.890 43.478 8.35 4.98 0.00 3.21
2455 2502 1.132500 ACCTATAGCTCAAGCACCCC 58.868 55.000 4.59 0.00 45.16 4.95
2458 2505 2.611225 AGCACCTATAGCTCAAGCAC 57.389 50.000 4.59 0.00 45.16 4.40
2522 2569 7.752239 CCATAAAGCTTCTTATGTCAACAACAG 59.248 37.037 14.27 0.00 42.37 3.16
2563 2610 8.537728 TCACATGGCTAAAAGATTGGAATATT 57.462 30.769 0.00 0.00 0.00 1.28
2570 2617 7.034685 TCATCATCACATGGCTAAAAGATTG 57.965 36.000 0.00 0.00 0.00 2.67
2577 2624 9.259832 ACTATACTATCATCATCACATGGCTAA 57.740 33.333 0.00 0.00 0.00 3.09
2656 2703 7.598278 TCAAACATCAACACAACAAGTAACTT 58.402 30.769 0.00 0.00 0.00 2.66
2710 2757 5.405269 GCAACAACACCAAACTCAATAATCC 59.595 40.000 0.00 0.00 0.00 3.01
2722 2769 4.991153 TTTATGACAGCAACAACACCAA 57.009 36.364 0.00 0.00 0.00 3.67
2756 2803 8.458573 TCCAACACATCAATTACACTAAAAGT 57.541 30.769 0.00 0.00 0.00 2.66
2983 3030 6.485984 AGCTGCATACCTGAGATTTCATAAAG 59.514 38.462 1.02 0.00 31.68 1.85
2994 3041 0.393402 TTGGCAGCTGCATACCTGAG 60.393 55.000 37.63 0.00 44.36 3.35
3078 3125 6.683110 GCACGAAGAAGGGAATAGAATACAGA 60.683 42.308 0.00 0.00 0.00 3.41
3233 3280 2.105134 TCGCCAAACCCTCTTTACTTCA 59.895 45.455 0.00 0.00 0.00 3.02
3500 3547 8.354011 GTGGAACTATGATACTGTTGTATGTC 57.646 38.462 0.00 0.00 39.29 3.06
3557 3604 2.832129 TGTCATGTCTTCCAGTACCTCC 59.168 50.000 0.00 0.00 0.00 4.30
3564 3611 3.693085 CCCTTCATTGTCATGTCTTCCAG 59.307 47.826 0.00 0.00 0.00 3.86
3695 3742 5.005094 TCAATGAGCATGAGAAATGTGTCA 58.995 37.500 0.00 0.00 0.00 3.58
3845 3892 9.511272 TCATAATACTCTAAAGCTCGTGGTATA 57.489 33.333 0.00 0.00 0.00 1.47
3875 3922 4.541973 AGCAAAACCATTTCCCTTCATC 57.458 40.909 0.00 0.00 0.00 2.92
3883 3930 2.609491 GGGTCCGAAGCAAAACCATTTC 60.609 50.000 0.00 0.00 0.00 2.17
3935 3982 0.179018 AGTGGTCTCTGTTGGCCAAC 60.179 55.000 36.78 36.78 41.50 3.77
3983 4030 3.009723 AGAATGTTTGATACGCTGTGGG 58.990 45.455 0.00 0.00 0.00 4.61
4042 4089 4.727235 AGAAGCGTGCTTAACTGTTAAC 57.273 40.909 7.15 0.00 36.26 2.01
4043 4090 5.404366 CACTAGAAGCGTGCTTAACTGTTAA 59.596 40.000 7.15 12.08 36.26 2.01
4044 4091 4.921515 CACTAGAAGCGTGCTTAACTGTTA 59.078 41.667 7.15 0.00 36.26 2.41
4045 4092 3.741344 CACTAGAAGCGTGCTTAACTGTT 59.259 43.478 7.15 0.00 36.26 3.16
4046 4093 3.318017 CACTAGAAGCGTGCTTAACTGT 58.682 45.455 7.15 2.15 36.26 3.55
4047 4094 3.980238 CACTAGAAGCGTGCTTAACTG 57.020 47.619 7.15 1.55 36.26 3.16
4087 4134 6.765036 ACAATCACATTTGTTTGCATTTACCA 59.235 30.769 3.15 0.00 36.43 3.25
4109 4156 4.415881 ACTGAACACACATACCTCACAA 57.584 40.909 0.00 0.00 0.00 3.33
4161 4208 3.135994 ACTTTAGCGGTTTCATGTTCGT 58.864 40.909 0.00 0.00 0.00 3.85
4162 4209 3.806316 ACTTTAGCGGTTTCATGTTCG 57.194 42.857 0.00 0.00 0.00 3.95
4163 4210 5.358298 AGAACTTTAGCGGTTTCATGTTC 57.642 39.130 0.00 2.44 34.55 3.18
4241 4370 7.015289 ACATCATGTACATTTTTCGAAACTCG 58.985 34.615 10.79 4.14 42.10 4.18
4263 4392 2.770164 AGGAGCTTTTGACGCTACAT 57.230 45.000 0.00 0.00 40.88 2.29
4270 4399 3.696051 TGGCAATCATAGGAGCTTTTGAC 59.304 43.478 0.00 0.00 0.00 3.18
4278 4407 2.107031 TGACCCATGGCAATCATAGGAG 59.893 50.000 6.09 0.00 36.87 3.69
4309 4438 5.942325 AACATGTTTAAAACGCAGAACAC 57.058 34.783 4.92 0.00 35.13 3.32
4361 4490 4.036852 GCAATACCTGTAATTCTGGGAAGC 59.963 45.833 0.00 0.00 39.12 3.86
4389 4518 4.870021 ATAAAATCCCAGTTCCTCTGCT 57.130 40.909 0.00 0.00 42.38 4.24
4409 4538 7.872138 TCTAACAGGATTTCTTACATGGGAAT 58.128 34.615 0.00 0.00 0.00 3.01
4448 4583 4.142902 ACCGATTTGTTTAGTTGATCGCTG 60.143 41.667 0.00 0.00 38.52 5.18
4463 4598 5.273944 GCTCTGCCTATTTTTACCGATTTG 58.726 41.667 0.00 0.00 0.00 2.32
4549 4685 5.550232 TGCTCATCTCGTAAAACGTACTA 57.450 39.130 0.00 0.00 43.14 1.82
4550 4686 4.430137 TGCTCATCTCGTAAAACGTACT 57.570 40.909 0.00 0.00 43.14 2.73
4551 4687 4.620184 ACTTGCTCATCTCGTAAAACGTAC 59.380 41.667 0.00 0.00 43.14 3.67
4580 4716 3.676873 GCCAACCACTGCAAATATCCAAG 60.677 47.826 0.00 0.00 0.00 3.61
4590 4726 0.106769 TTCTGAAGCCAACCACTGCA 60.107 50.000 0.00 0.00 0.00 4.41
4620 4756 1.073216 CGCGAGCTGGAACTGTGTAG 61.073 60.000 0.00 0.00 0.00 2.74
4628 4764 0.032952 ACTTGTTACGCGAGCTGGAA 59.967 50.000 15.93 0.00 31.61 3.53
4629 4765 0.666274 CACTTGTTACGCGAGCTGGA 60.666 55.000 15.93 0.00 31.61 3.86
4636 4778 3.613563 ACATTTTGTCACTTGTTACGCG 58.386 40.909 3.53 3.53 0.00 6.01
4738 4880 2.691011 GCTACTCTAACCTGACCTCCTG 59.309 54.545 0.00 0.00 0.00 3.86
4777 4919 2.138596 AAAAACAAGAGGTGCATGCG 57.861 45.000 14.09 0.00 0.00 4.73
4797 4944 3.048600 AGCTTTAGATATGCACAGGGGA 58.951 45.455 0.00 0.00 0.00 4.81
4799 4946 4.063689 CTCAGCTTTAGATATGCACAGGG 58.936 47.826 0.00 0.00 0.00 4.45
4802 4949 6.165700 TCATCTCAGCTTTAGATATGCACA 57.834 37.500 7.80 0.00 32.40 4.57
4804 4951 7.278135 AGTTTCATCTCAGCTTTAGATATGCA 58.722 34.615 7.80 0.00 32.40 3.96
4882 5030 1.881973 GATGCACTTTCTCAAGGTGCA 59.118 47.619 23.29 23.29 44.21 4.57
4883 5031 2.157738 AGATGCACTTTCTCAAGGTGC 58.842 47.619 14.66 14.66 37.46 5.01
4933 5081 7.406799 TTGGCGAAGATTTGAAAAGAATTTC 57.593 32.000 0.00 0.00 44.27 2.17
4935 5083 7.784633 TTTTGGCGAAGATTTGAAAAGAATT 57.215 28.000 0.00 0.00 0.00 2.17
4937 5085 6.591834 TGTTTTTGGCGAAGATTTGAAAAGAA 59.408 30.769 0.00 0.00 0.00 2.52
4951 5101 4.371786 TGCAATGTTTATGTTTTTGGCGA 58.628 34.783 0.00 0.00 0.00 5.54
4963 5113 5.761234 ACGGTCTAACTTTCTGCAATGTTTA 59.239 36.000 0.00 0.00 33.23 2.01
4969 5119 3.390135 CTCACGGTCTAACTTTCTGCAA 58.610 45.455 0.00 0.00 0.00 4.08
4981 5131 2.146342 CACAAGAAATGCTCACGGTCT 58.854 47.619 0.00 0.00 0.00 3.85
4983 5133 1.238439 CCACAAGAAATGCTCACGGT 58.762 50.000 0.00 0.00 0.00 4.83
4986 5136 0.961019 TGCCCACAAGAAATGCTCAC 59.039 50.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.