Multiple sequence alignment - TraesCS1B01G238600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G238600 chr1B 100.000 5759 0 0 1 5759 426687906 426682148 0.000000e+00 10635
1 TraesCS1B01G238600 chr1D 93.868 2805 80 30 647 3419 314990225 314987481 0.000000e+00 4143
2 TraesCS1B01G238600 chr1D 95.700 1651 46 13 3477 5105 314987248 314985601 0.000000e+00 2632
3 TraesCS1B01G238600 chr1D 96.226 265 6 2 1 262 314990996 314990733 1.150000e-116 431
4 TraesCS1B01G238600 chr1D 86.982 338 15 15 288 597 314990657 314990321 2.550000e-93 353
5 TraesCS1B01G238600 chr1D 95.161 62 3 0 3417 3478 314987285 314987224 1.320000e-16 99
6 TraesCS1B01G238600 chr1A 93.589 2137 72 18 1299 3413 395461924 395459831 0.000000e+00 3127
7 TraesCS1B01G238600 chr1A 94.894 1645 62 11 3477 5105 395459595 395457957 0.000000e+00 2553
8 TraesCS1B01G238600 chr1A 85.533 947 53 35 282 1173 395462836 395461919 0.000000e+00 913
9 TraesCS1B01G238600 chr1A 87.879 297 17 10 4 284 395463220 395462927 1.200000e-86 331
10 TraesCS1B01G238600 chr1A 84.328 134 14 3 2700 2826 444171812 444171679 2.180000e-24 124
11 TraesCS1B01G238600 chr1A 83.206 131 15 3 2700 2823 575548284 575548154 4.720000e-21 113
12 TraesCS1B01G238600 chr6B 83.766 154 16 4 2677 2823 11401323 11401474 2.800000e-28 137
13 TraesCS1B01G238600 chr3A 83.969 131 14 3 2700 2823 698287652 698287782 1.010000e-22 119
14 TraesCS1B01G238600 chr6D 85.593 118 10 3 2700 2810 57462882 57462999 3.650000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G238600 chr1B 426682148 426687906 5758 True 10635.0 10635 100.00000 1 5759 1 chr1B.!!$R1 5758
1 TraesCS1B01G238600 chr1D 314985601 314990996 5395 True 1531.6 4143 93.58740 1 5105 5 chr1D.!!$R1 5104
2 TraesCS1B01G238600 chr1A 395457957 395463220 5263 True 1731.0 3127 90.47375 4 5105 4 chr1A.!!$R3 5101

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
798 1002 0.386985 GACGAGACGAAAGCGGAGTT 60.387 55.000 0.00 0.00 43.17 3.01 F
1209 1427 0.326595 TCAATTAACCAGCTGGGCGA 59.673 50.000 35.42 20.58 42.05 5.54 F
1837 2070 0.250124 TAATCGTATTGGCCGGCTGG 60.250 55.000 28.56 7.41 38.77 4.85 F
2240 2475 1.229529 GTTGGGTGAGGGGGAGAGA 60.230 63.158 0.00 0.00 0.00 3.10 F
2568 2811 1.795768 TGCGATCCTTCACTGTTCAC 58.204 50.000 0.00 0.00 0.00 3.18 F
3380 3633 1.801242 TTGAGACTGTCCTGACCCAA 58.199 50.000 3.76 0.00 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1835 2068 0.034186 AATGATCTGGCCGCTTTCCA 60.034 50.000 0.00 0.00 0.00 3.53 R
2217 2452 0.104356 TCCCCCTCACCCAACAACTA 60.104 55.000 0.00 0.00 0.00 2.24 R
3613 4065 0.036858 TTGGCGTGATCATTCGGTCA 60.037 50.000 0.00 0.00 0.00 4.02 R
3884 4336 3.348647 ACCACACGATCCAATTCATCA 57.651 42.857 0.00 0.00 0.00 3.07 R
4518 4971 0.179032 TGTTGATGAAGTGCACGGGT 60.179 50.000 12.01 0.07 0.00 5.28 R
5165 5638 0.106769 TTGGCACAGAAGGCACAGAA 60.107 50.000 0.00 0.00 44.33 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 126 4.059459 GTTCTGCGCGTGTCGTGG 62.059 66.667 8.43 0.00 41.07 4.94
257 264 4.717313 GCCCGTCCAACCACCCTC 62.717 72.222 0.00 0.00 0.00 4.30
272 292 1.916181 ACCCTCACCCCTAATCAGTTG 59.084 52.381 0.00 0.00 0.00 3.16
286 399 5.897377 AATCAGTTGAGAAAATTACCGGG 57.103 39.130 6.32 0.00 0.00 5.73
293 406 1.202952 AGAAAATTACCGGGGTGCACA 60.203 47.619 20.43 0.00 0.00 4.57
398 515 1.101331 GGAGCAGGCTCATCCAAAAG 58.899 55.000 21.63 0.00 44.40 2.27
399 516 1.615384 GGAGCAGGCTCATCCAAAAGT 60.615 52.381 21.63 0.00 44.40 2.66
467 599 4.124351 CGTCGGTTAGCCCTCGCA 62.124 66.667 0.00 0.00 37.52 5.10
597 745 2.815647 CGTTGCTCCTTCGGCTCC 60.816 66.667 0.00 0.00 0.00 4.70
598 746 2.815647 GTTGCTCCTTCGGCTCCG 60.816 66.667 1.14 1.14 41.35 4.63
615 795 2.937149 CTCCGCTTTCCTTAACTAAGCC 59.063 50.000 0.00 0.00 40.83 4.35
639 821 2.166664 GACTACTAGTCAAGGCCCACAG 59.833 54.545 10.85 0.00 44.45 3.66
644 826 0.472734 AGTCAAGGCCCACAGAGAGT 60.473 55.000 0.00 0.00 0.00 3.24
645 827 1.203187 AGTCAAGGCCCACAGAGAGTA 60.203 52.381 0.00 0.00 0.00 2.59
718 920 2.042435 CCGCCTCTTCTCCTCCCT 60.042 66.667 0.00 0.00 0.00 4.20
739 943 4.584325 CCTTTCTATCTCCTCCTGTCTCTG 59.416 50.000 0.00 0.00 0.00 3.35
741 945 5.977821 TTCTATCTCCTCCTGTCTCTGTA 57.022 43.478 0.00 0.00 0.00 2.74
743 947 4.972568 TCTATCTCCTCCTGTCTCTGTACT 59.027 45.833 0.00 0.00 0.00 2.73
763 967 2.677875 TCTGCTCTGCCGCTCTCA 60.678 61.111 0.00 0.00 0.00 3.27
764 968 2.202770 CTGCTCTGCCGCTCTCAG 60.203 66.667 0.00 0.00 0.00 3.35
765 969 2.677875 TGCTCTGCCGCTCTCAGA 60.678 61.111 0.00 0.00 38.16 3.27
766 970 2.223200 CTGCTCTGCCGCTCTCAGAA 62.223 60.000 0.00 0.00 39.77 3.02
767 971 1.519013 GCTCTGCCGCTCTCAGAAG 60.519 63.158 0.00 0.00 39.77 2.85
770 974 2.283894 TGCCGCTCTCAGAAGGGA 60.284 61.111 0.00 0.00 0.00 4.20
771 975 2.295472 CTGCCGCTCTCAGAAGGGAG 62.295 65.000 3.45 3.45 35.95 4.30
772 976 3.087666 GCCGCTCTCAGAAGGGAGG 62.088 68.421 0.00 0.00 45.33 4.30
773 977 1.380515 CCGCTCTCAGAAGGGAGGA 60.381 63.158 0.00 0.00 45.38 3.71
774 978 1.391157 CCGCTCTCAGAAGGGAGGAG 61.391 65.000 0.00 0.00 45.38 3.69
775 979 0.395036 CGCTCTCAGAAGGGAGGAGA 60.395 60.000 0.00 0.00 36.35 3.71
780 984 1.568597 CTCAGAAGGGAGGAGAGGAGA 59.431 57.143 0.00 0.00 0.00 3.71
781 985 1.286553 TCAGAAGGGAGGAGAGGAGAC 59.713 57.143 0.00 0.00 0.00 3.36
793 997 0.521659 GAGGAGACGAGACGAAAGCG 60.522 60.000 0.00 0.00 44.79 4.68
798 1002 0.386985 GACGAGACGAAAGCGGAGTT 60.387 55.000 0.00 0.00 43.17 3.01
799 1003 0.386985 ACGAGACGAAAGCGGAGTTC 60.387 55.000 0.00 0.00 43.17 3.01
800 1004 1.071567 CGAGACGAAAGCGGAGTTCC 61.072 60.000 0.00 0.00 43.17 3.62
801 1005 0.736672 GAGACGAAAGCGGAGTTCCC 60.737 60.000 0.00 0.00 43.17 3.97
1162 1380 2.358737 ACAGCGGCTACAACAGGC 60.359 61.111 0.26 0.00 46.29 4.85
1168 1386 1.222113 GGCTACAACAGGCTCTCCC 59.778 63.158 0.00 0.00 46.26 4.30
1173 1391 2.936032 AACAGGCTCTCCCCCACC 60.936 66.667 0.00 0.00 0.00 4.61
1174 1392 3.810687 AACAGGCTCTCCCCCACCA 62.811 63.158 0.00 0.00 0.00 4.17
1175 1393 3.406200 CAGGCTCTCCCCCACCAG 61.406 72.222 0.00 0.00 0.00 4.00
1176 1394 4.748798 AGGCTCTCCCCCACCAGG 62.749 72.222 0.00 0.00 0.00 4.45
1187 1405 3.680842 CCACCAGGGTAAGCGATAC 57.319 57.895 0.00 0.00 0.00 2.24
1188 1406 1.120530 CCACCAGGGTAAGCGATACT 58.879 55.000 0.00 0.00 34.74 2.12
1189 1407 1.068741 CCACCAGGGTAAGCGATACTC 59.931 57.143 0.00 0.00 34.99 2.59
1190 1408 2.032620 CACCAGGGTAAGCGATACTCT 58.967 52.381 0.00 0.00 46.69 3.24
1191 1409 2.034812 CACCAGGGTAAGCGATACTCTC 59.965 54.545 2.48 0.00 41.77 3.20
1192 1410 2.307768 CCAGGGTAAGCGATACTCTCA 58.692 52.381 2.48 0.00 41.77 3.27
1193 1411 2.693591 CCAGGGTAAGCGATACTCTCAA 59.306 50.000 2.48 0.00 41.77 3.02
1194 1412 3.322254 CCAGGGTAAGCGATACTCTCAAT 59.678 47.826 2.48 0.00 41.77 2.57
1209 1427 0.326595 TCAATTAACCAGCTGGGCGA 59.673 50.000 35.42 20.58 42.05 5.54
1550 1774 1.444553 GTCCGACTGCGAGTTCCTG 60.445 63.158 0.00 0.00 40.82 3.86
1553 1777 1.285950 CGACTGCGAGTTCCTGACA 59.714 57.895 0.00 0.00 40.82 3.58
1648 1872 4.934989 CCTCCCAAGGTACGCTTC 57.065 61.111 0.00 0.00 37.94 3.86
1668 1900 5.635280 GCTTCTTTGTTTTTCTATTCCCTGC 59.365 40.000 0.00 0.00 0.00 4.85
1679 1911 1.639635 ATTCCCTGCGCCTTCTCCAT 61.640 55.000 4.18 0.00 0.00 3.41
1783 2015 1.574702 GGTGGGTAGTGTGCTTTCGC 61.575 60.000 0.00 0.00 0.00 4.70
1813 2045 1.137513 GTGAGAGTTTACGCGTGCTT 58.862 50.000 24.59 4.35 0.00 3.91
1827 2060 3.918591 CGCGTGCTTCCTATAATCGTATT 59.081 43.478 0.00 0.00 0.00 1.89
1829 2062 4.091509 GCGTGCTTCCTATAATCGTATTGG 59.908 45.833 0.00 0.00 34.82 3.16
1831 2064 4.392138 GTGCTTCCTATAATCGTATTGGCC 59.608 45.833 0.00 0.00 33.87 5.36
1833 2066 3.880047 TCCTATAATCGTATTGGCCGG 57.120 47.619 0.00 0.00 33.87 6.13
1834 2067 2.093869 TCCTATAATCGTATTGGCCGGC 60.094 50.000 21.18 21.18 33.87 6.13
1835 2068 2.093658 CCTATAATCGTATTGGCCGGCT 60.094 50.000 28.56 9.55 0.00 5.52
1837 2070 0.250124 TAATCGTATTGGCCGGCTGG 60.250 55.000 28.56 7.41 38.77 4.85
1838 2071 1.978455 AATCGTATTGGCCGGCTGGA 61.978 55.000 28.56 13.04 37.49 3.86
1888 2121 8.656806 TGTTTCTCTTCCTTTCTAATCCAAGTA 58.343 33.333 0.00 0.00 0.00 2.24
1889 2122 9.674068 GTTTCTCTTCCTTTCTAATCCAAGTAT 57.326 33.333 0.00 0.00 0.00 2.12
1971 2204 2.871633 CAAACCATGGTTTTGTCCTTGC 59.128 45.455 35.17 0.00 44.84 4.01
2070 2305 5.927954 TCATTACCGGTGTTTCTTGTTAC 57.072 39.130 19.93 0.00 0.00 2.50
2217 2452 6.002653 AGAGAAGTTCCCTTTGTTACAACT 57.997 37.500 0.00 0.00 0.00 3.16
2240 2475 1.229529 GTTGGGTGAGGGGGAGAGA 60.230 63.158 0.00 0.00 0.00 3.10
2460 2703 1.871080 AGACACTGTCTTCCGCAAAG 58.129 50.000 5.82 0.00 40.28 2.77
2561 2804 4.083802 GCAGGTTTATATGCGATCCTTCAC 60.084 45.833 0.00 0.00 31.87 3.18
2568 2811 1.795768 TGCGATCCTTCACTGTTCAC 58.204 50.000 0.00 0.00 0.00 3.18
2667 2911 5.765182 TCTTGAGAAGCTAAGGAACAAAAGG 59.235 40.000 0.00 0.00 0.00 3.11
2794 3038 3.596214 TCTCTAAATGTGTTCCGCCTTC 58.404 45.455 0.00 0.00 0.00 3.46
2807 3051 5.708230 TGTTCCGCCTTCATGTAAGTATTTT 59.292 36.000 0.00 0.00 32.89 1.82
2952 3196 1.966451 GAAGTTGGGCCAGTGACCG 60.966 63.158 6.23 0.00 0.00 4.79
3268 3521 3.354467 GTGTAGCCTGGTACTGTAGAGT 58.646 50.000 7.88 0.00 36.07 3.24
3380 3633 1.801242 TTGAGACTGTCCTGACCCAA 58.199 50.000 3.76 0.00 0.00 4.12
3439 3891 4.041198 TCTTTACTTCCCCTAACTGTGGTG 59.959 45.833 0.00 0.00 0.00 4.17
3447 3899 2.615493 CCCTAACTGTGGTGTGATGACC 60.615 54.545 0.00 0.00 36.43 4.02
3458 3910 2.926200 GTGTGATGACCATTGACTCTCG 59.074 50.000 0.00 0.00 0.00 4.04
3459 3911 2.825532 TGTGATGACCATTGACTCTCGA 59.174 45.455 0.00 0.00 0.00 4.04
3460 3912 3.258123 TGTGATGACCATTGACTCTCGAA 59.742 43.478 0.00 0.00 0.00 3.71
3461 3913 4.081476 TGTGATGACCATTGACTCTCGAAT 60.081 41.667 0.00 0.00 0.00 3.34
3462 3914 5.127031 TGTGATGACCATTGACTCTCGAATA 59.873 40.000 0.00 0.00 0.00 1.75
3463 3915 6.183360 TGTGATGACCATTGACTCTCGAATAT 60.183 38.462 0.00 0.00 0.00 1.28
3464 3916 6.703607 GTGATGACCATTGACTCTCGAATATT 59.296 38.462 0.00 0.00 0.00 1.28
3465 3917 6.925718 TGATGACCATTGACTCTCGAATATTC 59.074 38.462 5.30 5.30 0.00 1.75
3466 3918 6.471233 TGACCATTGACTCTCGAATATTCT 57.529 37.500 13.45 0.00 0.00 2.40
3467 3919 7.582667 TGACCATTGACTCTCGAATATTCTA 57.417 36.000 13.45 1.71 0.00 2.10
3468 3920 8.183104 TGACCATTGACTCTCGAATATTCTAT 57.817 34.615 13.45 0.00 0.00 1.98
3469 3921 8.300286 TGACCATTGACTCTCGAATATTCTATC 58.700 37.037 13.45 4.60 0.00 2.08
3470 3922 7.309177 ACCATTGACTCTCGAATATTCTATCG 58.691 38.462 13.45 1.07 40.31 2.92
3471 3923 7.040340 ACCATTGACTCTCGAATATTCTATCGT 60.040 37.037 13.45 5.64 39.91 3.73
3472 3924 8.451748 CCATTGACTCTCGAATATTCTATCGTA 58.548 37.037 13.45 0.00 39.91 3.43
3473 3925 9.995957 CATTGACTCTCGAATATTCTATCGTAT 57.004 33.333 13.45 0.00 39.91 3.06
3474 3926 9.995957 ATTGACTCTCGAATATTCTATCGTATG 57.004 33.333 13.45 0.00 39.91 2.39
3475 3927 8.549338 TGACTCTCGAATATTCTATCGTATGT 57.451 34.615 13.45 2.41 39.91 2.29
3476 3928 8.657729 TGACTCTCGAATATTCTATCGTATGTC 58.342 37.037 13.45 10.19 39.91 3.06
3477 3929 8.780846 ACTCTCGAATATTCTATCGTATGTCT 57.219 34.615 13.45 0.00 39.91 3.41
3478 3930 8.875803 ACTCTCGAATATTCTATCGTATGTCTC 58.124 37.037 13.45 0.00 39.91 3.36
3479 3931 9.093970 CTCTCGAATATTCTATCGTATGTCTCT 57.906 37.037 13.45 0.00 39.91 3.10
3480 3932 9.089601 TCTCGAATATTCTATCGTATGTCTCTC 57.910 37.037 13.45 0.00 39.91 3.20
3506 3958 9.561270 CGAATATTCTATCGTATGTCTTGACAT 57.439 33.333 18.52 18.52 34.48 3.06
3601 4053 4.403752 TCGAACTCAGATGATCCAGACATT 59.596 41.667 0.00 0.00 0.00 2.71
3613 4065 5.071384 TGATCCAGACATTCATAGCATCACT 59.929 40.000 0.00 0.00 0.00 3.41
3784 4236 7.232534 TCCTTATGAACATTAAACCAGTTTGCT 59.767 33.333 6.03 0.00 34.23 3.91
3884 4336 5.231702 TCACAAGGAAACCGGTTAAGTAT 57.768 39.130 22.60 3.70 0.00 2.12
4178 4630 7.500559 GGCTAATCCTAGAACATCATGAAACTT 59.499 37.037 0.00 0.00 0.00 2.66
4306 4758 7.316544 ACTGTGTTAACTTTTAGACCTTGTG 57.683 36.000 7.22 0.00 0.00 3.33
4316 4768 8.007405 ACTTTTAGACCTTGTGCTATTGTTTT 57.993 30.769 0.00 0.00 0.00 2.43
4330 4782 5.164061 GCTATTGTTTTGGCACGAATTCTTG 60.164 40.000 7.55 7.55 0.00 3.02
4339 4791 4.080807 TGGCACGAATTCTTGGTATAAGGA 60.081 41.667 13.26 0.00 0.00 3.36
4359 4812 4.454678 GGATACTGGCTGATGAACAATCA 58.545 43.478 0.00 0.00 43.24 2.57
4367 4820 5.106038 TGGCTGATGAACAATCATTGACTTC 60.106 40.000 3.79 0.00 46.30 3.01
4392 4845 2.856000 AGTGAAGGCTGGGGCAGT 60.856 61.111 0.00 0.00 40.87 4.40
4518 4971 1.822990 ACGAAGGCGATGAAGAAGGTA 59.177 47.619 0.00 0.00 41.64 3.08
4551 5004 4.006319 TCATCAACATAACCGCATTGTCA 58.994 39.130 0.00 0.00 0.00 3.58
4777 5236 8.343366 CAAGATGACAATGCATATATATCTGCC 58.657 37.037 17.62 5.35 37.59 4.85
4783 5242 6.153340 ACAATGCATATATATCTGCCCCAAAC 59.847 38.462 17.62 0.00 37.59 2.93
4791 5250 1.678970 CTGCCCCAAACCTGGTAGC 60.679 63.158 0.00 0.00 41.72 3.58
4792 5251 2.362503 GCCCCAAACCTGGTAGCC 60.363 66.667 0.00 0.00 41.72 3.93
4793 5252 2.045340 CCCCAAACCTGGTAGCCG 60.045 66.667 0.00 0.00 41.72 5.52
4966 5427 4.820716 AGAGTTATTATACCGTCTGCTCGT 59.179 41.667 0.00 0.00 0.00 4.18
4969 5430 2.857592 TTATACCGTCTGCTCGTTCC 57.142 50.000 0.00 0.00 0.00 3.62
4996 5457 7.044798 AGTGTGACTATTTAAGAGGAATGCTC 58.955 38.462 0.00 0.00 0.00 4.26
5065 5538 4.267536 TCCATCAAGCTCTTTTCATGAGG 58.732 43.478 0.00 0.00 32.57 3.86
5075 5548 9.692325 AAGCTCTTTTCATGAGGATATTTAACT 57.308 29.630 0.00 0.00 32.57 2.24
5093 5566 8.972458 ATTTAACTTTTTGGGCTGTAACAATT 57.028 26.923 0.00 0.00 0.00 2.32
5095 5568 6.918892 AACTTTTTGGGCTGTAACAATTTC 57.081 33.333 0.00 0.00 0.00 2.17
5096 5569 5.983540 ACTTTTTGGGCTGTAACAATTTCA 58.016 33.333 0.00 0.00 0.00 2.69
5105 5578 5.631096 GGCTGTAACAATTTCAAAGAGCTTC 59.369 40.000 0.00 0.00 0.00 3.86
5106 5579 6.208644 GCTGTAACAATTTCAAAGAGCTTCA 58.791 36.000 0.00 0.00 0.00 3.02
5107 5580 6.142958 GCTGTAACAATTTCAAAGAGCTTCAC 59.857 38.462 0.00 0.00 0.00 3.18
5108 5581 6.503524 TGTAACAATTTCAAAGAGCTTCACC 58.496 36.000 0.00 0.00 0.00 4.02
5109 5582 5.596836 AACAATTTCAAAGAGCTTCACCA 57.403 34.783 0.00 0.00 0.00 4.17
5110 5583 5.596836 ACAATTTCAAAGAGCTTCACCAA 57.403 34.783 0.00 0.00 0.00 3.67
5111 5584 6.165700 ACAATTTCAAAGAGCTTCACCAAT 57.834 33.333 0.00 0.00 0.00 3.16
5112 5585 5.987347 ACAATTTCAAAGAGCTTCACCAATG 59.013 36.000 0.00 0.00 0.00 2.82
5113 5586 5.796424 ATTTCAAAGAGCTTCACCAATGT 57.204 34.783 0.00 0.00 0.00 2.71
5114 5587 4.572985 TTCAAAGAGCTTCACCAATGTG 57.427 40.909 0.00 0.00 44.18 3.21
5115 5588 2.294233 TCAAAGAGCTTCACCAATGTGC 59.706 45.455 0.00 0.00 42.46 4.57
5116 5589 0.877071 AAGAGCTTCACCAATGTGCG 59.123 50.000 0.00 0.00 42.46 5.34
5117 5590 1.154150 GAGCTTCACCAATGTGCGC 60.154 57.895 0.00 0.00 42.46 6.09
5118 5591 2.126346 GCTTCACCAATGTGCGCC 60.126 61.111 4.18 0.00 42.46 6.53
5119 5592 2.176546 CTTCACCAATGTGCGCCG 59.823 61.111 4.18 0.00 42.46 6.46
5120 5593 3.326889 CTTCACCAATGTGCGCCGG 62.327 63.158 4.18 0.00 42.46 6.13
5151 5624 3.480133 GCCAGCCGGGTCCTGTAT 61.480 66.667 1.27 0.00 39.65 2.29
5152 5625 2.822399 CCAGCCGGGTCCTGTATC 59.178 66.667 1.27 0.00 0.00 2.24
5153 5626 2.417516 CAGCCGGGTCCTGTATCG 59.582 66.667 1.27 0.00 0.00 2.92
5154 5627 2.838225 AGCCGGGTCCTGTATCGG 60.838 66.667 0.00 0.00 44.70 4.18
5155 5628 3.925090 GCCGGGTCCTGTATCGGG 61.925 72.222 2.18 0.00 42.43 5.14
5156 5629 3.925090 CCGGGTCCTGTATCGGGC 61.925 72.222 0.00 0.00 38.93 6.13
5159 5632 3.557290 GGTCCTGTATCGGGCCCC 61.557 72.222 18.66 1.60 43.26 5.80
5160 5633 2.446036 GTCCTGTATCGGGCCCCT 60.446 66.667 18.66 6.45 0.00 4.79
5161 5634 2.122989 TCCTGTATCGGGCCCCTC 60.123 66.667 18.66 4.61 0.00 4.30
5162 5635 3.242291 CCTGTATCGGGCCCCTCC 61.242 72.222 18.66 1.83 0.00 4.30
5163 5636 2.122813 CTGTATCGGGCCCCTCCT 60.123 66.667 18.66 0.01 34.39 3.69
5164 5637 1.155390 CTGTATCGGGCCCCTCCTA 59.845 63.158 18.66 0.00 34.39 2.94
5165 5638 0.252284 CTGTATCGGGCCCCTCCTAT 60.252 60.000 18.66 4.81 34.39 2.57
5166 5639 0.192566 TGTATCGGGCCCCTCCTATT 59.807 55.000 18.66 0.00 34.39 1.73
5167 5640 0.903236 GTATCGGGCCCCTCCTATTC 59.097 60.000 18.66 0.00 34.39 1.75
5168 5641 0.790993 TATCGGGCCCCTCCTATTCT 59.209 55.000 18.66 0.00 34.39 2.40
5169 5642 0.838122 ATCGGGCCCCTCCTATTCTG 60.838 60.000 18.66 0.00 34.39 3.02
5170 5643 1.766461 CGGGCCCCTCCTATTCTGT 60.766 63.158 18.66 0.00 34.39 3.41
5171 5644 1.839894 GGGCCCCTCCTATTCTGTG 59.160 63.158 12.23 0.00 34.39 3.66
5172 5645 1.149401 GGCCCCTCCTATTCTGTGC 59.851 63.158 0.00 0.00 0.00 4.57
5173 5646 1.149401 GCCCCTCCTATTCTGTGCC 59.851 63.158 0.00 0.00 0.00 5.01
5174 5647 1.348775 GCCCCTCCTATTCTGTGCCT 61.349 60.000 0.00 0.00 0.00 4.75
5175 5648 1.216990 CCCCTCCTATTCTGTGCCTT 58.783 55.000 0.00 0.00 0.00 4.35
5176 5649 1.141858 CCCCTCCTATTCTGTGCCTTC 59.858 57.143 0.00 0.00 0.00 3.46
5177 5650 2.122768 CCCTCCTATTCTGTGCCTTCT 58.877 52.381 0.00 0.00 0.00 2.85
5178 5651 2.158842 CCCTCCTATTCTGTGCCTTCTG 60.159 54.545 0.00 0.00 0.00 3.02
5179 5652 2.503356 CCTCCTATTCTGTGCCTTCTGT 59.497 50.000 0.00 0.00 0.00 3.41
5180 5653 3.529533 CTCCTATTCTGTGCCTTCTGTG 58.470 50.000 0.00 0.00 0.00 3.66
5181 5654 2.012673 CCTATTCTGTGCCTTCTGTGC 58.987 52.381 0.00 0.00 0.00 4.57
5182 5655 2.012673 CTATTCTGTGCCTTCTGTGCC 58.987 52.381 0.00 0.00 0.00 5.01
5183 5656 0.111061 ATTCTGTGCCTTCTGTGCCA 59.889 50.000 0.00 0.00 0.00 4.92
5184 5657 0.106769 TTCTGTGCCTTCTGTGCCAA 60.107 50.000 0.00 0.00 0.00 4.52
5185 5658 0.535780 TCTGTGCCTTCTGTGCCAAG 60.536 55.000 0.00 0.00 0.00 3.61
5186 5659 1.521450 CTGTGCCTTCTGTGCCAAGG 61.521 60.000 0.00 0.00 43.13 3.61
5215 5688 3.482783 GCTCGTGGCAGCGTCTTC 61.483 66.667 8.80 0.00 41.35 2.87
5216 5689 2.259818 CTCGTGGCAGCGTCTTCT 59.740 61.111 8.80 0.00 0.00 2.85
5217 5690 1.803519 CTCGTGGCAGCGTCTTCTC 60.804 63.158 8.80 0.00 0.00 2.87
5218 5691 3.175240 CGTGGCAGCGTCTTCTCG 61.175 66.667 0.00 0.00 0.00 4.04
5226 5699 2.260434 CGTCTTCTCGCCCGGAAA 59.740 61.111 0.73 0.00 0.00 3.13
5227 5700 1.373748 CGTCTTCTCGCCCGGAAAA 60.374 57.895 0.73 0.00 0.00 2.29
5228 5701 0.947180 CGTCTTCTCGCCCGGAAAAA 60.947 55.000 0.73 0.00 0.00 1.94
5248 5721 6.641176 AAAAAGTTCGCGAGTTTGAAAAAT 57.359 29.167 16.49 0.98 31.32 1.82
5249 5722 5.620098 AAAGTTCGCGAGTTTGAAAAATG 57.380 34.783 9.59 0.00 29.74 2.32
5250 5723 3.628017 AGTTCGCGAGTTTGAAAAATGG 58.372 40.909 9.59 0.00 0.00 3.16
5251 5724 3.066203 AGTTCGCGAGTTTGAAAAATGGT 59.934 39.130 9.59 0.00 0.00 3.55
5252 5725 3.701532 TCGCGAGTTTGAAAAATGGTT 57.298 38.095 3.71 0.00 0.00 3.67
5253 5726 3.623863 TCGCGAGTTTGAAAAATGGTTC 58.376 40.909 3.71 0.00 0.00 3.62
5254 5727 3.065510 TCGCGAGTTTGAAAAATGGTTCA 59.934 39.130 3.71 0.00 35.72 3.18
5255 5728 3.980775 CGCGAGTTTGAAAAATGGTTCAT 59.019 39.130 0.00 0.00 37.36 2.57
5256 5729 4.444056 CGCGAGTTTGAAAAATGGTTCATT 59.556 37.500 0.00 0.00 37.36 2.57
5257 5730 5.610124 CGCGAGTTTGAAAAATGGTTCATTG 60.610 40.000 0.00 0.00 37.36 2.82
5258 5731 5.461737 GCGAGTTTGAAAAATGGTTCATTGA 59.538 36.000 0.00 0.00 37.36 2.57
5259 5732 6.146021 GCGAGTTTGAAAAATGGTTCATTGAT 59.854 34.615 0.00 0.00 37.36 2.57
5260 5733 7.619982 GCGAGTTTGAAAAATGGTTCATTGATC 60.620 37.037 0.00 0.00 37.36 2.92
5261 5734 7.409661 CGAGTTTGAAAAATGGTTCATTGATCG 60.410 37.037 0.00 0.00 37.36 3.69
5262 5735 7.209475 AGTTTGAAAAATGGTTCATTGATCGT 58.791 30.769 0.00 0.00 37.36 3.73
5263 5736 7.169645 AGTTTGAAAAATGGTTCATTGATCGTG 59.830 33.333 0.00 0.00 37.36 4.35
5264 5737 6.324561 TGAAAAATGGTTCATTGATCGTGA 57.675 33.333 0.00 0.00 34.04 4.35
5265 5738 6.743110 TGAAAAATGGTTCATTGATCGTGAA 58.257 32.000 8.73 8.73 34.04 3.18
5266 5739 7.205992 TGAAAAATGGTTCATTGATCGTGAAA 58.794 30.769 13.09 2.39 37.34 2.69
5267 5740 7.708322 TGAAAAATGGTTCATTGATCGTGAAAA 59.292 29.630 13.09 7.13 37.34 2.29
5268 5741 7.642071 AAAATGGTTCATTGATCGTGAAAAG 57.358 32.000 13.09 0.00 37.34 2.27
5269 5742 6.573664 AATGGTTCATTGATCGTGAAAAGA 57.426 33.333 13.09 3.61 37.34 2.52
5270 5743 6.573664 ATGGTTCATTGATCGTGAAAAGAA 57.426 33.333 13.09 0.00 37.34 2.52
5271 5744 6.000891 TGGTTCATTGATCGTGAAAAGAAG 57.999 37.500 13.09 0.00 37.34 2.85
5272 5745 5.530915 TGGTTCATTGATCGTGAAAAGAAGT 59.469 36.000 13.09 0.00 37.34 3.01
5273 5746 6.039270 TGGTTCATTGATCGTGAAAAGAAGTT 59.961 34.615 13.09 0.00 37.34 2.66
5274 5747 6.578919 GGTTCATTGATCGTGAAAAGAAGTTC 59.421 38.462 13.09 0.00 37.34 3.01
5275 5748 6.859420 TCATTGATCGTGAAAAGAAGTTCA 57.141 33.333 5.50 0.00 35.14 3.18
5276 5749 7.439157 TCATTGATCGTGAAAAGAAGTTCAT 57.561 32.000 5.50 0.00 39.61 2.57
5277 5750 7.521529 TCATTGATCGTGAAAAGAAGTTCATC 58.478 34.615 5.50 1.31 39.61 2.92
5278 5751 6.859420 TTGATCGTGAAAAGAAGTTCATCA 57.141 33.333 5.50 3.96 39.61 3.07
5279 5752 6.859420 TGATCGTGAAAAGAAGTTCATCAA 57.141 33.333 5.50 0.00 39.61 2.57
5280 5753 7.439157 TGATCGTGAAAAGAAGTTCATCAAT 57.561 32.000 5.50 0.00 39.61 2.57
5281 5754 7.874940 TGATCGTGAAAAGAAGTTCATCAATT 58.125 30.769 5.50 0.00 39.61 2.32
5282 5755 8.998377 TGATCGTGAAAAGAAGTTCATCAATTA 58.002 29.630 5.50 0.00 39.61 1.40
5283 5756 9.994432 GATCGTGAAAAGAAGTTCATCAATTAT 57.006 29.630 5.50 2.06 39.61 1.28
5284 5757 9.778993 ATCGTGAAAAGAAGTTCATCAATTATG 57.221 29.630 5.50 0.00 39.61 1.90
5285 5758 8.998377 TCGTGAAAAGAAGTTCATCAATTATGA 58.002 29.630 5.50 0.00 43.03 2.15
5400 5873 9.934190 TTGAATTTTAGTAAGTTCAACGGTTAC 57.066 29.630 15.78 0.00 41.89 2.50
5401 5874 9.107177 TGAATTTTAGTAAGTTCAACGGTTACA 57.893 29.630 9.21 0.00 37.14 2.41
5402 5875 9.934190 GAATTTTAGTAAGTTCAACGGTTACAA 57.066 29.630 0.00 0.00 32.12 2.41
5466 5939 6.976636 AAAAAGTTCGCAAATTTGGAGAAA 57.023 29.167 19.47 0.00 0.00 2.52
5467 5940 6.588348 AAAAGTTCGCAAATTTGGAGAAAG 57.412 33.333 19.47 0.00 0.00 2.62
5468 5941 4.918810 AGTTCGCAAATTTGGAGAAAGT 57.081 36.364 19.47 1.94 0.00 2.66
5469 5942 5.262588 AGTTCGCAAATTTGGAGAAAGTT 57.737 34.783 19.47 2.30 29.54 2.66
5470 5943 5.281727 AGTTCGCAAATTTGGAGAAAGTTC 58.718 37.500 19.47 0.00 26.94 3.01
5471 5944 4.909696 TCGCAAATTTGGAGAAAGTTCA 57.090 36.364 19.47 0.00 26.94 3.18
5472 5945 4.606961 TCGCAAATTTGGAGAAAGTTCAC 58.393 39.130 19.47 0.00 26.94 3.18
5473 5946 4.097135 TCGCAAATTTGGAGAAAGTTCACA 59.903 37.500 19.47 0.00 26.94 3.58
5474 5947 4.207019 CGCAAATTTGGAGAAAGTTCACAC 59.793 41.667 19.47 0.00 26.94 3.82
5475 5948 5.108517 GCAAATTTGGAGAAAGTTCACACA 58.891 37.500 19.47 0.00 26.94 3.72
5476 5949 5.580297 GCAAATTTGGAGAAAGTTCACACAA 59.420 36.000 19.47 0.00 26.94 3.33
5477 5950 6.455513 GCAAATTTGGAGAAAGTTCACACAAC 60.456 38.462 19.47 0.00 26.94 3.32
5478 5951 4.349663 TTTGGAGAAAGTTCACACAACG 57.650 40.909 0.00 0.00 0.00 4.10
5479 5952 2.980568 TGGAGAAAGTTCACACAACGT 58.019 42.857 0.00 0.00 0.00 3.99
5480 5953 4.126208 TGGAGAAAGTTCACACAACGTA 57.874 40.909 0.00 0.00 0.00 3.57
5481 5954 4.505808 TGGAGAAAGTTCACACAACGTAA 58.494 39.130 0.00 0.00 0.00 3.18
5483 5956 4.807304 GGAGAAAGTTCACACAACGTAAGA 59.193 41.667 0.00 0.00 43.62 2.10
5484 5957 5.292589 GGAGAAAGTTCACACAACGTAAGAA 59.707 40.000 0.00 0.00 43.62 2.52
5485 5958 6.183360 GGAGAAAGTTCACACAACGTAAGAAA 60.183 38.462 0.00 0.00 43.62 2.52
5486 5959 7.136289 AGAAAGTTCACACAACGTAAGAAAA 57.864 32.000 0.00 0.00 43.62 2.29
5487 5960 7.758495 AGAAAGTTCACACAACGTAAGAAAAT 58.242 30.769 0.00 0.00 43.62 1.82
5488 5961 8.885722 AGAAAGTTCACACAACGTAAGAAAATA 58.114 29.630 0.00 0.00 43.62 1.40
5489 5962 9.493206 GAAAGTTCACACAACGTAAGAAAATAA 57.507 29.630 0.00 0.00 43.62 1.40
5490 5963 9.843334 AAAGTTCACACAACGTAAGAAAATAAA 57.157 25.926 0.00 0.00 43.62 1.40
5491 5964 9.843334 AAGTTCACACAACGTAAGAAAATAAAA 57.157 25.926 0.00 0.00 43.62 1.52
5492 5965 9.843334 AGTTCACACAACGTAAGAAAATAAAAA 57.157 25.926 0.00 0.00 43.62 1.94
5515 5988 9.989869 AAAAACAAAAACGAAAAAGACAAGAAA 57.010 22.222 0.00 0.00 0.00 2.52
5516 5989 9.644993 AAAACAAAAACGAAAAAGACAAGAAAG 57.355 25.926 0.00 0.00 0.00 2.62
5517 5990 7.346208 ACAAAAACGAAAAAGACAAGAAAGG 57.654 32.000 0.00 0.00 0.00 3.11
5518 5991 6.367695 ACAAAAACGAAAAAGACAAGAAAGGG 59.632 34.615 0.00 0.00 0.00 3.95
5519 5992 5.907866 AAACGAAAAAGACAAGAAAGGGA 57.092 34.783 0.00 0.00 0.00 4.20
5520 5993 5.907866 AACGAAAAAGACAAGAAAGGGAA 57.092 34.783 0.00 0.00 0.00 3.97
5521 5994 5.907866 ACGAAAAAGACAAGAAAGGGAAA 57.092 34.783 0.00 0.00 0.00 3.13
5522 5995 6.275494 ACGAAAAAGACAAGAAAGGGAAAA 57.725 33.333 0.00 0.00 0.00 2.29
5523 5996 6.693466 ACGAAAAAGACAAGAAAGGGAAAAA 58.307 32.000 0.00 0.00 0.00 1.94
5524 5997 7.327975 ACGAAAAAGACAAGAAAGGGAAAAAT 58.672 30.769 0.00 0.00 0.00 1.82
5525 5998 8.471609 ACGAAAAAGACAAGAAAGGGAAAAATA 58.528 29.630 0.00 0.00 0.00 1.40
5526 5999 9.308318 CGAAAAAGACAAGAAAGGGAAAAATAA 57.692 29.630 0.00 0.00 0.00 1.40
5531 6004 9.599866 AAGACAAGAAAGGGAAAAATAAAAGTG 57.400 29.630 0.00 0.00 0.00 3.16
5532 6005 8.977412 AGACAAGAAAGGGAAAAATAAAAGTGA 58.023 29.630 0.00 0.00 0.00 3.41
5533 6006 9.594478 GACAAGAAAGGGAAAAATAAAAGTGAA 57.406 29.630 0.00 0.00 0.00 3.18
5534 6007 9.599866 ACAAGAAAGGGAAAAATAAAAGTGAAG 57.400 29.630 0.00 0.00 0.00 3.02
5535 6008 9.045223 CAAGAAAGGGAAAAATAAAAGTGAAGG 57.955 33.333 0.00 0.00 0.00 3.46
5536 6009 8.547481 AGAAAGGGAAAAATAAAAGTGAAGGA 57.453 30.769 0.00 0.00 0.00 3.36
5537 6010 8.642432 AGAAAGGGAAAAATAAAAGTGAAGGAG 58.358 33.333 0.00 0.00 0.00 3.69
5538 6011 8.547481 AAAGGGAAAAATAAAAGTGAAGGAGA 57.453 30.769 0.00 0.00 0.00 3.71
5539 6012 8.547481 AAGGGAAAAATAAAAGTGAAGGAGAA 57.453 30.769 0.00 0.00 0.00 2.87
5540 6013 8.547481 AGGGAAAAATAAAAGTGAAGGAGAAA 57.453 30.769 0.00 0.00 0.00 2.52
5541 6014 8.988060 AGGGAAAAATAAAAGTGAAGGAGAAAA 58.012 29.630 0.00 0.00 0.00 2.29
5542 6015 9.607988 GGGAAAAATAAAAGTGAAGGAGAAAAA 57.392 29.630 0.00 0.00 0.00 1.94
5550 6023 8.777865 AAAAGTGAAGGAGAAAAAGGAAAAAG 57.222 30.769 0.00 0.00 0.00 2.27
5551 6024 7.718334 AAGTGAAGGAGAAAAAGGAAAAAGA 57.282 32.000 0.00 0.00 0.00 2.52
5552 6025 7.718334 AGTGAAGGAGAAAAAGGAAAAAGAA 57.282 32.000 0.00 0.00 0.00 2.52
5553 6026 8.134202 AGTGAAGGAGAAAAAGGAAAAAGAAA 57.866 30.769 0.00 0.00 0.00 2.52
5554 6027 8.593679 AGTGAAGGAGAAAAAGGAAAAAGAAAA 58.406 29.630 0.00 0.00 0.00 2.29
5555 6028 9.383519 GTGAAGGAGAAAAAGGAAAAAGAAAAT 57.616 29.630 0.00 0.00 0.00 1.82
5581 6054 8.792830 AAAAGGAAAGGAGAAAAAGGAAAAAG 57.207 30.769 0.00 0.00 0.00 2.27
5582 6055 7.733773 AAGGAAAGGAGAAAAAGGAAAAAGA 57.266 32.000 0.00 0.00 0.00 2.52
5583 6056 7.733773 AGGAAAGGAGAAAAAGGAAAAAGAA 57.266 32.000 0.00 0.00 0.00 2.52
5584 6057 8.146053 AGGAAAGGAGAAAAAGGAAAAAGAAA 57.854 30.769 0.00 0.00 0.00 2.52
5585 6058 8.602424 AGGAAAGGAGAAAAAGGAAAAAGAAAA 58.398 29.630 0.00 0.00 0.00 2.29
5586 6059 8.883731 GGAAAGGAGAAAAAGGAAAAAGAAAAG 58.116 33.333 0.00 0.00 0.00 2.27
5587 6060 9.653287 GAAAGGAGAAAAAGGAAAAAGAAAAGA 57.347 29.630 0.00 0.00 0.00 2.52
5590 6063 9.658799 AGGAGAAAAAGGAAAAAGAAAAGAAAG 57.341 29.630 0.00 0.00 0.00 2.62
5591 6064 9.653287 GGAGAAAAAGGAAAAAGAAAAGAAAGA 57.347 29.630 0.00 0.00 0.00 2.52
5599 6072 8.690884 AGGAAAAAGAAAAGAAAGAAGAAGAGG 58.309 33.333 0.00 0.00 0.00 3.69
5600 6073 8.687242 GGAAAAAGAAAAGAAAGAAGAAGAGGA 58.313 33.333 0.00 0.00 0.00 3.71
5603 6076 7.815840 AAGAAAAGAAAGAAGAAGAGGAAGG 57.184 36.000 0.00 0.00 0.00 3.46
5604 6077 7.142995 AGAAAAGAAAGAAGAAGAGGAAGGA 57.857 36.000 0.00 0.00 0.00 3.36
5605 6078 7.578203 AGAAAAGAAAGAAGAAGAGGAAGGAA 58.422 34.615 0.00 0.00 0.00 3.36
5606 6079 8.055790 AGAAAAGAAAGAAGAAGAGGAAGGAAA 58.944 33.333 0.00 0.00 0.00 3.13
5607 6080 7.815840 AAAGAAAGAAGAAGAGGAAGGAAAG 57.184 36.000 0.00 0.00 0.00 2.62
5608 6081 5.875224 AGAAAGAAGAAGAGGAAGGAAAGG 58.125 41.667 0.00 0.00 0.00 3.11
5609 6082 4.649267 AAGAAGAAGAGGAAGGAAAGGG 57.351 45.455 0.00 0.00 0.00 3.95
5610 6083 3.875571 AGAAGAAGAGGAAGGAAAGGGA 58.124 45.455 0.00 0.00 0.00 4.20
5611 6084 3.843619 AGAAGAAGAGGAAGGAAAGGGAG 59.156 47.826 0.00 0.00 0.00 4.30
5612 6085 1.912731 AGAAGAGGAAGGAAAGGGAGC 59.087 52.381 0.00 0.00 0.00 4.70
5613 6086 1.630878 GAAGAGGAAGGAAAGGGAGCA 59.369 52.381 0.00 0.00 0.00 4.26
5614 6087 1.284313 AGAGGAAGGAAAGGGAGCAG 58.716 55.000 0.00 0.00 0.00 4.24
5615 6088 0.988063 GAGGAAGGAAAGGGAGCAGT 59.012 55.000 0.00 0.00 0.00 4.40
5616 6089 1.352687 GAGGAAGGAAAGGGAGCAGTT 59.647 52.381 0.00 0.00 0.00 3.16
5617 6090 2.572104 GAGGAAGGAAAGGGAGCAGTTA 59.428 50.000 0.00 0.00 0.00 2.24
5618 6091 2.986728 AGGAAGGAAAGGGAGCAGTTAA 59.013 45.455 0.00 0.00 0.00 2.01
5619 6092 3.397955 AGGAAGGAAAGGGAGCAGTTAAA 59.602 43.478 0.00 0.00 0.00 1.52
5620 6093 4.141018 AGGAAGGAAAGGGAGCAGTTAAAA 60.141 41.667 0.00 0.00 0.00 1.52
5621 6094 4.772624 GGAAGGAAAGGGAGCAGTTAAAAT 59.227 41.667 0.00 0.00 0.00 1.82
5622 6095 5.336770 GGAAGGAAAGGGAGCAGTTAAAATG 60.337 44.000 0.00 0.00 0.00 2.32
5623 6096 4.740902 AGGAAAGGGAGCAGTTAAAATGT 58.259 39.130 0.00 0.00 0.00 2.71
5624 6097 4.767409 AGGAAAGGGAGCAGTTAAAATGTC 59.233 41.667 0.00 0.00 0.00 3.06
5625 6098 4.767409 GGAAAGGGAGCAGTTAAAATGTCT 59.233 41.667 0.00 0.00 0.00 3.41
5626 6099 5.335976 GGAAAGGGAGCAGTTAAAATGTCTG 60.336 44.000 0.00 0.00 0.00 3.51
5627 6100 3.690460 AGGGAGCAGTTAAAATGTCTGG 58.310 45.455 0.00 0.00 0.00 3.86
5628 6101 2.755103 GGGAGCAGTTAAAATGTCTGGG 59.245 50.000 0.00 0.00 0.00 4.45
5629 6102 3.421844 GGAGCAGTTAAAATGTCTGGGT 58.578 45.455 0.00 0.00 0.00 4.51
5630 6103 3.826729 GGAGCAGTTAAAATGTCTGGGTT 59.173 43.478 0.00 0.00 0.00 4.11
5631 6104 4.280929 GGAGCAGTTAAAATGTCTGGGTTT 59.719 41.667 0.00 0.00 0.00 3.27
5632 6105 5.200368 AGCAGTTAAAATGTCTGGGTTTG 57.800 39.130 0.00 0.00 0.00 2.93
5633 6106 4.649218 AGCAGTTAAAATGTCTGGGTTTGT 59.351 37.500 0.00 0.00 0.00 2.83
5634 6107 5.830991 AGCAGTTAAAATGTCTGGGTTTGTA 59.169 36.000 0.00 0.00 0.00 2.41
5635 6108 6.322712 AGCAGTTAAAATGTCTGGGTTTGTAA 59.677 34.615 0.00 0.00 0.00 2.41
5636 6109 6.640907 GCAGTTAAAATGTCTGGGTTTGTAAG 59.359 38.462 0.00 0.00 0.00 2.34
5637 6110 7.683463 GCAGTTAAAATGTCTGGGTTTGTAAGT 60.683 37.037 0.00 0.00 0.00 2.24
5638 6111 8.194769 CAGTTAAAATGTCTGGGTTTGTAAGTT 58.805 33.333 0.00 0.00 0.00 2.66
5639 6112 8.410912 AGTTAAAATGTCTGGGTTTGTAAGTTC 58.589 33.333 0.00 0.00 0.00 3.01
5640 6113 6.783708 AAAATGTCTGGGTTTGTAAGTTCA 57.216 33.333 0.00 0.00 0.00 3.18
5641 6114 6.976934 AAATGTCTGGGTTTGTAAGTTCAT 57.023 33.333 0.00 0.00 0.00 2.57
5642 6115 6.976934 AATGTCTGGGTTTGTAAGTTCATT 57.023 33.333 0.00 0.00 0.00 2.57
5643 6116 5.766150 TGTCTGGGTTTGTAAGTTCATTG 57.234 39.130 0.00 0.00 0.00 2.82
5644 6117 5.441500 TGTCTGGGTTTGTAAGTTCATTGA 58.558 37.500 0.00 0.00 0.00 2.57
5645 6118 6.068010 TGTCTGGGTTTGTAAGTTCATTGAT 58.932 36.000 0.00 0.00 0.00 2.57
5646 6119 6.549364 TGTCTGGGTTTGTAAGTTCATTGATT 59.451 34.615 0.00 0.00 0.00 2.57
5647 6120 7.069331 TGTCTGGGTTTGTAAGTTCATTGATTT 59.931 33.333 0.00 0.00 0.00 2.17
5648 6121 7.926018 GTCTGGGTTTGTAAGTTCATTGATTTT 59.074 33.333 0.00 0.00 0.00 1.82
5649 6122 8.482128 TCTGGGTTTGTAAGTTCATTGATTTTT 58.518 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.531602 GCAGGACAGGTTGCCCTTT 60.532 57.895 0.00 0.00 39.89 3.11
49 50 4.280019 AAAAGGAGCGGCCGGGTT 62.280 61.111 29.38 0.00 43.43 4.11
257 264 6.840780 AATTTTCTCAACTGATTAGGGGTG 57.159 37.500 0.00 0.00 0.00 4.61
272 292 1.471287 GTGCACCCCGGTAATTTTCTC 59.529 52.381 5.22 0.00 0.00 2.87
286 399 1.392589 CCATTAGTGGGATGTGCACC 58.607 55.000 15.69 0.00 42.11 5.01
293 406 0.552848 CCACCAGCCATTAGTGGGAT 59.447 55.000 6.38 0.00 46.01 3.85
380 497 1.831580 ACTTTTGGATGAGCCTGCTC 58.168 50.000 12.18 12.18 43.01 4.26
398 515 2.351447 GGCGAGCTTGTTTTTAGGGAAC 60.351 50.000 2.14 0.00 0.00 3.62
399 516 1.883926 GGCGAGCTTGTTTTTAGGGAA 59.116 47.619 2.14 0.00 0.00 3.97
520 668 1.550130 CCCCTTTCTCCAGCGTGGTA 61.550 60.000 4.33 0.00 39.03 3.25
597 745 2.678336 CCTGGCTTAGTTAAGGAAAGCG 59.322 50.000 9.18 0.00 45.18 4.68
598 746 3.690139 GTCCTGGCTTAGTTAAGGAAAGC 59.310 47.826 7.51 7.51 40.45 3.51
615 795 1.757699 GGGCCTTGACTAGTAGTCCTG 59.242 57.143 24.32 16.95 44.44 3.86
639 821 0.896226 AAGCAAGGGACGGTACTCTC 59.104 55.000 0.00 0.00 0.00 3.20
644 826 0.981183 ATGACAAGCAAGGGACGGTA 59.019 50.000 0.00 0.00 0.00 4.02
645 827 0.321653 GATGACAAGCAAGGGACGGT 60.322 55.000 0.00 0.00 0.00 4.83
707 909 4.814967 AGGAGATAGAAAGGGAGGAGAAG 58.185 47.826 0.00 0.00 0.00 2.85
718 920 5.199982 ACAGAGACAGGAGGAGATAGAAA 57.800 43.478 0.00 0.00 0.00 2.52
739 943 1.435515 CGGCAGAGCAGAGGAGTAC 59.564 63.158 0.00 0.00 0.00 2.73
741 945 3.768922 GCGGCAGAGCAGAGGAGT 61.769 66.667 0.00 0.00 37.05 3.85
743 947 3.456365 GAGCGGCAGAGCAGAGGA 61.456 66.667 1.45 0.00 40.15 3.71
763 967 0.257616 CGTCTCCTCTCCTCCCTTCT 59.742 60.000 0.00 0.00 0.00 2.85
764 968 0.256464 TCGTCTCCTCTCCTCCCTTC 59.744 60.000 0.00 0.00 0.00 3.46
765 969 0.257616 CTCGTCTCCTCTCCTCCCTT 59.742 60.000 0.00 0.00 0.00 3.95
766 970 0.622154 TCTCGTCTCCTCTCCTCCCT 60.622 60.000 0.00 0.00 0.00 4.20
767 971 0.464916 GTCTCGTCTCCTCTCCTCCC 60.465 65.000 0.00 0.00 0.00 4.30
770 974 0.614294 TTCGTCTCGTCTCCTCTCCT 59.386 55.000 0.00 0.00 0.00 3.69
771 975 1.399089 CTTTCGTCTCGTCTCCTCTCC 59.601 57.143 0.00 0.00 0.00 3.71
772 976 1.202098 GCTTTCGTCTCGTCTCCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
773 977 0.806241 GCTTTCGTCTCGTCTCCTCT 59.194 55.000 0.00 0.00 0.00 3.69
774 978 0.521659 CGCTTTCGTCTCGTCTCCTC 60.522 60.000 0.00 0.00 0.00 3.71
775 979 1.502640 CGCTTTCGTCTCGTCTCCT 59.497 57.895 0.00 0.00 0.00 3.69
780 984 0.386985 GAACTCCGCTTTCGTCTCGT 60.387 55.000 0.00 0.00 0.00 4.18
781 985 1.071567 GGAACTCCGCTTTCGTCTCG 61.072 60.000 0.00 0.00 0.00 4.04
815 1019 1.745264 GGGGAATCTGAGGAGAGCG 59.255 63.158 0.00 0.00 0.00 5.03
818 1022 1.762460 GGCGGGGAATCTGAGGAGA 60.762 63.158 0.00 0.00 0.00 3.71
868 1072 3.391665 AATCAGGCGAGGAAGGGCG 62.392 63.158 0.00 0.00 34.74 6.13
869 1073 1.821332 CAATCAGGCGAGGAAGGGC 60.821 63.158 0.00 0.00 0.00 5.19
870 1074 0.471617 ATCAATCAGGCGAGGAAGGG 59.528 55.000 0.00 0.00 0.00 3.95
1173 1391 4.592485 ATTGAGAGTATCGCTTACCCTG 57.408 45.455 0.00 0.00 42.67 4.45
1174 1392 6.462628 GGTTAATTGAGAGTATCGCTTACCCT 60.463 42.308 0.00 0.00 42.67 4.34
1175 1393 5.695363 GGTTAATTGAGAGTATCGCTTACCC 59.305 44.000 0.00 0.00 42.67 3.69
1176 1394 6.278363 TGGTTAATTGAGAGTATCGCTTACC 58.722 40.000 0.00 0.00 42.67 2.85
1178 1396 5.983720 GCTGGTTAATTGAGAGTATCGCTTA 59.016 40.000 0.00 0.00 42.67 3.09
1179 1397 4.811557 GCTGGTTAATTGAGAGTATCGCTT 59.188 41.667 0.00 0.00 42.67 4.68
1180 1398 4.100189 AGCTGGTTAATTGAGAGTATCGCT 59.900 41.667 0.00 0.00 42.67 4.93
1181 1399 4.210120 CAGCTGGTTAATTGAGAGTATCGC 59.790 45.833 5.57 0.00 42.67 4.58
1182 1400 4.747108 CCAGCTGGTTAATTGAGAGTATCG 59.253 45.833 25.53 0.00 42.67 2.92
1183 1401 5.059833 CCCAGCTGGTTAATTGAGAGTATC 58.940 45.833 30.63 0.00 0.00 2.24
1184 1402 4.687219 GCCCAGCTGGTTAATTGAGAGTAT 60.687 45.833 30.63 0.00 36.04 2.12
1185 1403 3.370527 GCCCAGCTGGTTAATTGAGAGTA 60.371 47.826 30.63 0.00 36.04 2.59
1186 1404 2.619074 GCCCAGCTGGTTAATTGAGAGT 60.619 50.000 30.63 0.00 36.04 3.24
1187 1405 2.019984 GCCCAGCTGGTTAATTGAGAG 58.980 52.381 30.63 12.57 36.04 3.20
1188 1406 1.678728 CGCCCAGCTGGTTAATTGAGA 60.679 52.381 30.63 0.00 36.04 3.27
1189 1407 0.734889 CGCCCAGCTGGTTAATTGAG 59.265 55.000 30.63 14.04 36.04 3.02
1190 1408 0.326595 TCGCCCAGCTGGTTAATTGA 59.673 50.000 30.63 15.36 36.04 2.57
1191 1409 0.451783 GTCGCCCAGCTGGTTAATTG 59.548 55.000 30.63 15.52 36.04 2.32
1192 1410 1.024579 CGTCGCCCAGCTGGTTAATT 61.025 55.000 30.63 0.00 36.04 1.40
1193 1411 1.449601 CGTCGCCCAGCTGGTTAAT 60.450 57.895 30.63 0.00 36.04 1.40
1194 1412 2.047655 CGTCGCCCAGCTGGTTAA 60.048 61.111 30.63 12.78 36.04 2.01
1648 1872 3.920412 GCGCAGGGAATAGAAAAACAAAG 59.080 43.478 0.30 0.00 0.00 2.77
1757 1989 2.174854 AGCACACTACCCACCTTTTTCT 59.825 45.455 0.00 0.00 0.00 2.52
1783 2015 5.118817 GCGTAAACTCTCACTTTCCAGTTAG 59.881 44.000 0.00 0.00 0.00 2.34
1813 2045 2.093869 GCCGGCCAATACGATTATAGGA 60.094 50.000 18.11 0.00 0.00 2.94
1835 2068 0.034186 AATGATCTGGCCGCTTTCCA 60.034 50.000 0.00 0.00 0.00 3.53
1837 2070 2.019984 AGAAATGATCTGGCCGCTTTC 58.980 47.619 0.00 1.06 36.88 2.62
1838 2071 2.134789 AGAAATGATCTGGCCGCTTT 57.865 45.000 0.00 0.00 36.88 3.51
1971 2204 7.141363 CCTTGATGAAACTTTGAACTAACTGG 58.859 38.462 0.00 0.00 0.00 4.00
2022 2257 2.614983 GGTGCACCAAACGTTTTCTCTA 59.385 45.455 31.23 0.00 35.64 2.43
2070 2305 6.765355 AGAACCCCTTATACCAATCTTAGG 57.235 41.667 0.00 0.00 0.00 2.69
2217 2452 0.104356 TCCCCCTCACCCAACAACTA 60.104 55.000 0.00 0.00 0.00 2.24
2240 2475 0.341961 TGTACCATACCCCTCTGGCT 59.658 55.000 0.00 0.00 37.83 4.75
2265 2500 7.233348 ACTCCTATTTGCTTTCAGATTCCAAAA 59.767 33.333 0.00 0.00 0.00 2.44
2449 2692 5.759506 TTCAATACAAACTTTGCGGAAGA 57.240 34.783 6.64 0.00 38.77 2.87
2460 2703 7.708998 TGGTTGACCTAACTTTCAATACAAAC 58.291 34.615 1.34 0.00 39.31 2.93
2561 2804 7.254522 CCAAAAACCATCAAATTCTGTGAACAG 60.255 37.037 3.98 3.98 45.08 3.16
2568 2811 5.049954 CAGCACCAAAAACCATCAAATTCTG 60.050 40.000 0.00 0.00 0.00 3.02
2612 2855 7.770897 ACTTAGCATCGAACCTGATAGAAAAAT 59.229 33.333 0.00 0.00 0.00 1.82
2667 2911 3.131046 GTGAATCCCCCACAAACATCATC 59.869 47.826 0.00 0.00 34.81 2.92
2794 3038 9.318041 GTAGATATTGCGCAAAATACTTACATG 57.682 33.333 28.81 0.00 0.00 3.21
2807 3051 4.580580 TCAGAGAGAAGTAGATATTGCGCA 59.419 41.667 5.66 5.66 0.00 6.09
2934 3178 1.966451 CGGTCACTGGCCCAACTTC 60.966 63.158 0.00 0.00 0.00 3.01
2952 3196 2.270986 CCAGTGGCTTGGCTGGTTC 61.271 63.158 0.00 0.00 45.28 3.62
3008 3252 8.680039 TCCTTTTTGGAATACGAAAGAACTAA 57.320 30.769 0.00 0.00 42.94 2.24
3380 3633 2.154567 TAGCAGAACGGTACCCAGAT 57.845 50.000 6.25 0.00 0.00 2.90
3439 3891 3.510388 TCGAGAGTCAATGGTCATCAC 57.490 47.619 0.00 0.00 0.00 3.06
3447 3899 9.995957 ATACGATAGAATATTCGAGAGTCAATG 57.004 33.333 9.78 0.00 38.67 2.82
3463 3915 9.438228 AGAATATTCGAGAGACATACGATAGAA 57.562 33.333 9.78 0.00 41.84 2.10
3467 3919 8.544597 CGATAGAATATTCGAGAGACATACGAT 58.455 37.037 9.78 0.00 38.23 3.73
3468 3920 7.544915 ACGATAGAATATTCGAGAGACATACGA 59.455 37.037 9.78 0.00 39.38 3.43
3469 3921 7.677309 ACGATAGAATATTCGAGAGACATACG 58.323 38.462 9.78 7.76 39.38 3.06
3472 3924 9.168451 ACATACGATAGAATATTCGAGAGACAT 57.832 33.333 9.78 0.00 39.38 3.06
3473 3925 8.549338 ACATACGATAGAATATTCGAGAGACA 57.451 34.615 9.78 0.00 39.38 3.41
3474 3926 8.875803 AGACATACGATAGAATATTCGAGAGAC 58.124 37.037 9.78 0.29 39.38 3.36
3475 3927 9.438228 AAGACATACGATAGAATATTCGAGAGA 57.562 33.333 9.78 0.00 38.67 3.10
3476 3928 9.484326 CAAGACATACGATAGAATATTCGAGAG 57.516 37.037 9.78 5.82 38.67 3.20
3477 3929 9.216117 TCAAGACATACGATAGAATATTCGAGA 57.784 33.333 9.78 0.45 38.67 4.04
3478 3930 9.268255 GTCAAGACATACGATAGAATATTCGAG 57.732 37.037 9.78 5.59 38.67 4.04
3479 3931 8.780249 TGTCAAGACATACGATAGAATATTCGA 58.220 33.333 9.78 5.24 36.28 3.71
3480 3932 8.950403 TGTCAAGACATACGATAGAATATTCG 57.050 34.615 9.78 1.42 37.61 3.34
3506 3958 9.123902 CTCCTGAAATATTCCATGTAATTCACA 57.876 33.333 0.00 0.00 42.69 3.58
3601 4053 3.384467 TCATTCGGTCAGTGATGCTATGA 59.616 43.478 0.00 1.79 0.00 2.15
3613 4065 0.036858 TTGGCGTGATCATTCGGTCA 60.037 50.000 0.00 0.00 0.00 4.02
3784 4236 5.556915 CACATTACTCTCAAGGTTGGGTAA 58.443 41.667 0.00 0.00 0.00 2.85
3884 4336 3.348647 ACCACACGATCCAATTCATCA 57.651 42.857 0.00 0.00 0.00 3.07
4121 4573 6.643388 TCTTCATGTATGCAGATAACACAGT 58.357 36.000 0.00 0.00 0.00 3.55
4123 4575 7.989170 AGAATCTTCATGTATGCAGATAACACA 59.011 33.333 7.30 0.00 39.32 3.72
4124 4576 8.375608 AGAATCTTCATGTATGCAGATAACAC 57.624 34.615 7.30 2.09 39.32 3.32
4306 4758 4.485163 AGAATTCGTGCCAAAACAATAGC 58.515 39.130 0.00 0.00 0.00 2.97
4316 4768 4.080807 TCCTTATACCAAGAATTCGTGCCA 60.081 41.667 15.04 5.86 0.00 4.92
4330 4782 6.166982 GTTCATCAGCCAGTATCCTTATACC 58.833 44.000 0.00 0.00 39.08 2.73
4339 4791 6.039047 GTCAATGATTGTTCATCAGCCAGTAT 59.961 38.462 4.93 0.00 45.52 2.12
4343 4795 4.338012 AGTCAATGATTGTTCATCAGCCA 58.662 39.130 4.93 0.00 45.52 4.75
4358 4811 5.641209 CCTTCACTCCTGTAAGAAGTCAATG 59.359 44.000 0.00 0.00 34.07 2.82
4359 4812 5.799213 CCTTCACTCCTGTAAGAAGTCAAT 58.201 41.667 0.00 0.00 34.07 2.57
4367 4820 1.065854 CCCAGCCTTCACTCCTGTAAG 60.066 57.143 0.00 0.00 0.00 2.34
4392 4845 6.149973 CAGAGAAGCATTTTATGTTGTCAGGA 59.850 38.462 0.00 0.00 0.00 3.86
4434 4887 6.359617 CGACATCCAGTGTTTTTGTGTAATTC 59.640 38.462 0.00 0.00 42.36 2.17
4518 4971 0.179032 TGTTGATGAAGTGCACGGGT 60.179 50.000 12.01 0.07 0.00 5.28
4551 5004 2.351244 TGCGTCCTTGCGGATCTCT 61.351 57.895 0.00 0.00 42.43 3.10
4626 5079 1.962306 GGCGAACTTGCGTGGGTTA 60.962 57.895 0.00 0.00 35.06 2.85
4783 5242 0.383231 CGTACTAACCGGCTACCAGG 59.617 60.000 0.00 0.00 0.00 4.45
4791 5250 5.499139 TTACCATCTTACGTACTAACCGG 57.501 43.478 0.00 0.00 0.00 5.28
4792 5251 6.074676 GCAATTACCATCTTACGTACTAACCG 60.075 42.308 0.00 0.00 0.00 4.44
4793 5252 6.074676 CGCAATTACCATCTTACGTACTAACC 60.075 42.308 0.00 0.00 0.00 2.85
4856 5317 2.621407 CCCAGGTGAACCAACAGCATAT 60.621 50.000 1.62 0.00 40.20 1.78
4966 5427 5.713389 TCCTCTTAAATAGTCACACTCGGAA 59.287 40.000 0.00 0.00 0.00 4.30
4969 5430 6.019479 GCATTCCTCTTAAATAGTCACACTCG 60.019 42.308 0.00 0.00 0.00 4.18
5044 5514 4.267536 TCCTCATGAAAAGAGCTTGATGG 58.732 43.478 0.00 0.00 0.00 3.51
5045 5515 7.747155 ATATCCTCATGAAAAGAGCTTGATG 57.253 36.000 0.00 0.00 0.00 3.07
5046 5516 8.763984 AAATATCCTCATGAAAAGAGCTTGAT 57.236 30.769 0.00 0.00 0.00 2.57
5050 5520 9.692325 AAGTTAAATATCCTCATGAAAAGAGCT 57.308 29.630 0.00 0.00 0.00 4.09
5065 5538 9.699703 TTGTTACAGCCCAAAAAGTTAAATATC 57.300 29.630 0.00 0.00 0.00 1.63
5075 5548 7.106239 TCTTTGAAATTGTTACAGCCCAAAAA 58.894 30.769 0.00 0.00 0.00 1.94
5134 5607 3.462199 GATACAGGACCCGGCTGGC 62.462 68.421 5.85 0.00 37.83 4.85
5135 5608 2.822399 GATACAGGACCCGGCTGG 59.178 66.667 3.88 3.88 41.37 4.85
5136 5609 2.417516 CGATACAGGACCCGGCTG 59.582 66.667 0.00 0.00 0.00 4.85
5137 5610 2.838225 CCGATACAGGACCCGGCT 60.838 66.667 0.00 0.00 35.29 5.52
5138 5611 3.925090 CCCGATACAGGACCCGGC 61.925 72.222 0.00 0.00 40.56 6.13
5139 5612 3.925090 GCCCGATACAGGACCCGG 61.925 72.222 0.00 0.00 41.47 5.73
5140 5613 3.925090 GGCCCGATACAGGACCCG 61.925 72.222 0.00 0.00 0.00 5.28
5143 5616 2.446036 AGGGGCCCGATACAGGAC 60.446 66.667 18.95 0.00 0.00 3.85
5144 5617 2.122989 GAGGGGCCCGATACAGGA 60.123 66.667 18.95 0.00 0.00 3.86
5145 5618 2.382023 TAGGAGGGGCCCGATACAGG 62.382 65.000 18.95 0.00 37.37 4.00
5146 5619 0.252284 ATAGGAGGGGCCCGATACAG 60.252 60.000 18.95 0.00 37.37 2.74
5147 5620 0.192566 AATAGGAGGGGCCCGATACA 59.807 55.000 18.95 2.84 37.37 2.29
5148 5621 0.903236 GAATAGGAGGGGCCCGATAC 59.097 60.000 18.95 7.89 37.37 2.24
5149 5622 0.790993 AGAATAGGAGGGGCCCGATA 59.209 55.000 18.95 11.92 37.37 2.92
5150 5623 0.838122 CAGAATAGGAGGGGCCCGAT 60.838 60.000 18.95 6.80 37.37 4.18
5151 5624 1.459539 CAGAATAGGAGGGGCCCGA 60.460 63.158 18.95 4.23 37.37 5.14
5152 5625 1.766461 ACAGAATAGGAGGGGCCCG 60.766 63.158 18.95 1.20 37.37 6.13
5153 5626 1.839894 CACAGAATAGGAGGGGCCC 59.160 63.158 17.12 17.12 37.37 5.80
5154 5627 1.149401 GCACAGAATAGGAGGGGCC 59.851 63.158 0.00 0.00 0.00 5.80
5155 5628 1.149401 GGCACAGAATAGGAGGGGC 59.851 63.158 0.00 0.00 0.00 5.80
5156 5629 1.141858 GAAGGCACAGAATAGGAGGGG 59.858 57.143 0.00 0.00 0.00 4.79
5157 5630 2.122768 AGAAGGCACAGAATAGGAGGG 58.877 52.381 0.00 0.00 0.00 4.30
5158 5631 2.503356 ACAGAAGGCACAGAATAGGAGG 59.497 50.000 0.00 0.00 0.00 4.30
5159 5632 3.529533 CACAGAAGGCACAGAATAGGAG 58.470 50.000 0.00 0.00 0.00 3.69
5160 5633 2.355108 GCACAGAAGGCACAGAATAGGA 60.355 50.000 0.00 0.00 0.00 2.94
5161 5634 2.012673 GCACAGAAGGCACAGAATAGG 58.987 52.381 0.00 0.00 0.00 2.57
5162 5635 2.012673 GGCACAGAAGGCACAGAATAG 58.987 52.381 0.00 0.00 0.00 1.73
5163 5636 1.350684 TGGCACAGAAGGCACAGAATA 59.649 47.619 0.00 0.00 39.34 1.75
5164 5637 0.111061 TGGCACAGAAGGCACAGAAT 59.889 50.000 0.00 0.00 39.34 2.40
5165 5638 0.106769 TTGGCACAGAAGGCACAGAA 60.107 50.000 0.00 0.00 44.33 3.02
5166 5639 0.535780 CTTGGCACAGAAGGCACAGA 60.536 55.000 0.00 0.00 44.33 3.41
5167 5640 1.521450 CCTTGGCACAGAAGGCACAG 61.521 60.000 0.00 0.00 44.33 3.66
5168 5641 1.529010 CCTTGGCACAGAAGGCACA 60.529 57.895 0.00 0.00 44.33 4.57
5169 5642 3.359002 CCTTGGCACAGAAGGCAC 58.641 61.111 0.00 0.00 44.33 5.01
5172 5645 3.741476 GCGCCTTGGCACAGAAGG 61.741 66.667 12.45 0.00 42.39 3.46
5173 5646 2.074230 TTTGCGCCTTGGCACAGAAG 62.074 55.000 4.18 0.00 43.82 2.85
5174 5647 2.074230 CTTTGCGCCTTGGCACAGAA 62.074 55.000 4.18 5.15 41.97 3.02
5175 5648 2.518112 TTTGCGCCTTGGCACAGA 60.518 55.556 4.18 0.46 43.82 3.41
5176 5649 2.049802 CTTTGCGCCTTGGCACAG 60.050 61.111 4.18 0.00 43.82 3.66
5177 5650 3.604667 CCTTTGCGCCTTGGCACA 61.605 61.111 4.18 5.29 43.82 4.57
5178 5651 4.362476 CCCTTTGCGCCTTGGCAC 62.362 66.667 4.18 2.33 43.82 5.01
5198 5671 3.482783 GAAGACGCTGCCACGAGC 61.483 66.667 2.16 0.00 44.14 5.03
5199 5672 1.803519 GAGAAGACGCTGCCACGAG 60.804 63.158 2.16 0.00 36.70 4.18
5200 5673 2.258591 GAGAAGACGCTGCCACGA 59.741 61.111 2.16 0.00 36.70 4.35
5201 5674 3.175240 CGAGAAGACGCTGCCACG 61.175 66.667 0.00 0.00 39.50 4.94
5209 5682 0.947180 TTTTTCCGGGCGAGAAGACG 60.947 55.000 0.00 0.00 0.00 4.18
5210 5683 2.922779 TTTTTCCGGGCGAGAAGAC 58.077 52.632 0.00 0.00 0.00 3.01
5225 5698 6.454981 CCATTTTTCAAACTCGCGAACTTTTT 60.455 34.615 11.33 4.56 0.00 1.94
5226 5699 5.005299 CCATTTTTCAAACTCGCGAACTTTT 59.995 36.000 11.33 7.23 0.00 2.27
5227 5700 4.502645 CCATTTTTCAAACTCGCGAACTTT 59.497 37.500 11.33 7.97 0.00 2.66
5228 5701 4.041723 CCATTTTTCAAACTCGCGAACTT 58.958 39.130 11.33 3.03 0.00 2.66
5229 5702 3.066203 ACCATTTTTCAAACTCGCGAACT 59.934 39.130 11.33 0.00 0.00 3.01
5230 5703 3.368495 ACCATTTTTCAAACTCGCGAAC 58.632 40.909 11.33 0.00 0.00 3.95
5231 5704 3.701532 ACCATTTTTCAAACTCGCGAA 57.298 38.095 11.33 0.00 0.00 4.70
5232 5705 3.065510 TGAACCATTTTTCAAACTCGCGA 59.934 39.130 9.26 9.26 32.42 5.87
5233 5706 3.367607 TGAACCATTTTTCAAACTCGCG 58.632 40.909 0.00 0.00 32.42 5.87
5234 5707 5.461737 TCAATGAACCATTTTTCAAACTCGC 59.538 36.000 0.00 0.00 38.95 5.03
5235 5708 7.409661 CGATCAATGAACCATTTTTCAAACTCG 60.410 37.037 0.00 0.00 38.95 4.18
5236 5709 7.382218 ACGATCAATGAACCATTTTTCAAACTC 59.618 33.333 0.00 0.00 38.95 3.01
5237 5710 7.169645 CACGATCAATGAACCATTTTTCAAACT 59.830 33.333 0.00 0.00 38.95 2.66
5238 5711 7.168972 TCACGATCAATGAACCATTTTTCAAAC 59.831 33.333 0.00 0.00 38.95 2.93
5239 5712 7.205992 TCACGATCAATGAACCATTTTTCAAA 58.794 30.769 0.00 0.00 38.95 2.69
5240 5713 6.743110 TCACGATCAATGAACCATTTTTCAA 58.257 32.000 0.00 0.00 38.95 2.69
5241 5714 6.324561 TCACGATCAATGAACCATTTTTCA 57.675 33.333 0.00 0.00 39.79 2.69
5242 5715 7.636259 TTTCACGATCAATGAACCATTTTTC 57.364 32.000 8.54 0.00 35.82 2.29
5243 5716 7.925483 TCTTTTCACGATCAATGAACCATTTTT 59.075 29.630 8.54 0.00 35.82 1.94
5244 5717 7.432869 TCTTTTCACGATCAATGAACCATTTT 58.567 30.769 8.54 0.00 35.82 1.82
5245 5718 6.980593 TCTTTTCACGATCAATGAACCATTT 58.019 32.000 8.54 0.00 35.82 2.32
5246 5719 6.573664 TCTTTTCACGATCAATGAACCATT 57.426 33.333 8.54 0.00 35.82 3.16
5247 5720 6.207417 ACTTCTTTTCACGATCAATGAACCAT 59.793 34.615 8.54 0.00 35.82 3.55
5248 5721 5.530915 ACTTCTTTTCACGATCAATGAACCA 59.469 36.000 8.54 0.16 35.82 3.67
5249 5722 6.002062 ACTTCTTTTCACGATCAATGAACC 57.998 37.500 8.54 0.00 35.82 3.62
5250 5723 7.132213 TGAACTTCTTTTCACGATCAATGAAC 58.868 34.615 8.54 0.00 35.82 3.18
5251 5724 7.258022 TGAACTTCTTTTCACGATCAATGAA 57.742 32.000 5.49 5.49 34.27 2.57
5252 5725 6.859420 TGAACTTCTTTTCACGATCAATGA 57.141 33.333 0.00 0.00 30.29 2.57
5253 5726 7.300320 TGATGAACTTCTTTTCACGATCAATG 58.700 34.615 0.00 0.00 38.31 2.82
5254 5727 7.439157 TGATGAACTTCTTTTCACGATCAAT 57.561 32.000 0.00 0.00 38.31 2.57
5255 5728 6.859420 TGATGAACTTCTTTTCACGATCAA 57.141 33.333 0.00 0.00 38.31 2.57
5256 5729 6.859420 TTGATGAACTTCTTTTCACGATCA 57.141 33.333 0.00 0.00 38.31 2.92
5257 5730 9.994432 ATAATTGATGAACTTCTTTTCACGATC 57.006 29.630 0.00 0.00 38.31 3.69
5258 5731 9.778993 CATAATTGATGAACTTCTTTTCACGAT 57.221 29.630 0.00 0.00 38.31 3.73
5259 5732 8.998377 TCATAATTGATGAACTTCTTTTCACGA 58.002 29.630 0.00 0.00 41.80 4.35
5374 5847 9.934190 GTAACCGTTGAACTTACTAAAATTCAA 57.066 29.630 0.00 0.00 38.42 2.69
5375 5848 9.107177 TGTAACCGTTGAACTTACTAAAATTCA 57.893 29.630 8.35 0.00 0.00 2.57
5376 5849 9.934190 TTGTAACCGTTGAACTTACTAAAATTC 57.066 29.630 8.35 0.00 0.00 2.17
5443 5916 6.593770 ACTTTCTCCAAATTTGCGAACTTTTT 59.406 30.769 12.92 0.00 0.00 1.94
5444 5917 6.106003 ACTTTCTCCAAATTTGCGAACTTTT 58.894 32.000 12.92 0.40 0.00 2.27
5445 5918 5.660460 ACTTTCTCCAAATTTGCGAACTTT 58.340 33.333 12.92 2.43 0.00 2.66
5446 5919 5.262588 ACTTTCTCCAAATTTGCGAACTT 57.737 34.783 12.92 4.50 0.00 2.66
5447 5920 4.918810 ACTTTCTCCAAATTTGCGAACT 57.081 36.364 12.92 3.24 0.00 3.01
5448 5921 5.040635 TGAACTTTCTCCAAATTTGCGAAC 58.959 37.500 12.92 6.33 0.00 3.95
5449 5922 5.040635 GTGAACTTTCTCCAAATTTGCGAA 58.959 37.500 12.92 13.42 0.00 4.70
5450 5923 4.097135 TGTGAACTTTCTCCAAATTTGCGA 59.903 37.500 12.92 10.30 0.00 5.10
5451 5924 4.207019 GTGTGAACTTTCTCCAAATTTGCG 59.793 41.667 12.92 6.50 0.00 4.85
5452 5925 5.108517 TGTGTGAACTTTCTCCAAATTTGC 58.891 37.500 12.92 0.00 0.00 3.68
5453 5926 6.237542 CGTTGTGTGAACTTTCTCCAAATTTG 60.238 38.462 11.40 11.40 0.00 2.32
5454 5927 5.804979 CGTTGTGTGAACTTTCTCCAAATTT 59.195 36.000 0.00 0.00 0.00 1.82
5455 5928 5.105917 ACGTTGTGTGAACTTTCTCCAAATT 60.106 36.000 0.00 0.00 0.00 1.82
5456 5929 4.398044 ACGTTGTGTGAACTTTCTCCAAAT 59.602 37.500 0.00 0.00 0.00 2.32
5457 5930 3.754323 ACGTTGTGTGAACTTTCTCCAAA 59.246 39.130 0.00 0.00 0.00 3.28
5458 5931 3.340034 ACGTTGTGTGAACTTTCTCCAA 58.660 40.909 0.00 0.00 0.00 3.53
5459 5932 2.980568 ACGTTGTGTGAACTTTCTCCA 58.019 42.857 0.00 0.00 0.00 3.86
5460 5933 4.807304 TCTTACGTTGTGTGAACTTTCTCC 59.193 41.667 0.00 0.00 0.00 3.71
5461 5934 5.961395 TCTTACGTTGTGTGAACTTTCTC 57.039 39.130 0.00 0.00 0.00 2.87
5462 5935 6.730960 TTTCTTACGTTGTGTGAACTTTCT 57.269 33.333 0.00 0.00 0.00 2.52
5463 5936 7.964545 ATTTTCTTACGTTGTGTGAACTTTC 57.035 32.000 0.00 0.00 0.00 2.62
5464 5937 9.843334 TTTATTTTCTTACGTTGTGTGAACTTT 57.157 25.926 0.00 0.00 0.00 2.66
5465 5938 9.843334 TTTTATTTTCTTACGTTGTGTGAACTT 57.157 25.926 0.00 0.00 0.00 2.66
5466 5939 9.843334 TTTTTATTTTCTTACGTTGTGTGAACT 57.157 25.926 0.00 0.00 0.00 3.01
5489 5962 9.989869 TTTCTTGTCTTTTTCGTTTTTGTTTTT 57.010 22.222 0.00 0.00 0.00 1.94
5490 5963 9.644993 CTTTCTTGTCTTTTTCGTTTTTGTTTT 57.355 25.926 0.00 0.00 0.00 2.43
5491 5964 8.279800 CCTTTCTTGTCTTTTTCGTTTTTGTTT 58.720 29.630 0.00 0.00 0.00 2.83
5492 5965 7.095397 CCCTTTCTTGTCTTTTTCGTTTTTGTT 60.095 33.333 0.00 0.00 0.00 2.83
5493 5966 6.367695 CCCTTTCTTGTCTTTTTCGTTTTTGT 59.632 34.615 0.00 0.00 0.00 2.83
5494 5967 6.588373 TCCCTTTCTTGTCTTTTTCGTTTTTG 59.412 34.615 0.00 0.00 0.00 2.44
5495 5968 6.693466 TCCCTTTCTTGTCTTTTTCGTTTTT 58.307 32.000 0.00 0.00 0.00 1.94
5496 5969 6.275494 TCCCTTTCTTGTCTTTTTCGTTTT 57.725 33.333 0.00 0.00 0.00 2.43
5497 5970 5.907866 TCCCTTTCTTGTCTTTTTCGTTT 57.092 34.783 0.00 0.00 0.00 3.60
5498 5971 5.907866 TTCCCTTTCTTGTCTTTTTCGTT 57.092 34.783 0.00 0.00 0.00 3.85
5499 5972 5.907866 TTTCCCTTTCTTGTCTTTTTCGT 57.092 34.783 0.00 0.00 0.00 3.85
5500 5973 7.770801 ATTTTTCCCTTTCTTGTCTTTTTCG 57.229 32.000 0.00 0.00 0.00 3.46
5505 5978 9.599866 CACTTTTATTTTTCCCTTTCTTGTCTT 57.400 29.630 0.00 0.00 0.00 3.01
5506 5979 8.977412 TCACTTTTATTTTTCCCTTTCTTGTCT 58.023 29.630 0.00 0.00 0.00 3.41
5507 5980 9.594478 TTCACTTTTATTTTTCCCTTTCTTGTC 57.406 29.630 0.00 0.00 0.00 3.18
5508 5981 9.599866 CTTCACTTTTATTTTTCCCTTTCTTGT 57.400 29.630 0.00 0.00 0.00 3.16
5509 5982 9.045223 CCTTCACTTTTATTTTTCCCTTTCTTG 57.955 33.333 0.00 0.00 0.00 3.02
5510 5983 8.988060 TCCTTCACTTTTATTTTTCCCTTTCTT 58.012 29.630 0.00 0.00 0.00 2.52
5511 5984 8.547481 TCCTTCACTTTTATTTTTCCCTTTCT 57.453 30.769 0.00 0.00 0.00 2.52
5512 5985 8.638873 TCTCCTTCACTTTTATTTTTCCCTTTC 58.361 33.333 0.00 0.00 0.00 2.62
5513 5986 8.547481 TCTCCTTCACTTTTATTTTTCCCTTT 57.453 30.769 0.00 0.00 0.00 3.11
5514 5987 8.547481 TTCTCCTTCACTTTTATTTTTCCCTT 57.453 30.769 0.00 0.00 0.00 3.95
5515 5988 8.547481 TTTCTCCTTCACTTTTATTTTTCCCT 57.453 30.769 0.00 0.00 0.00 4.20
5516 5989 9.607988 TTTTTCTCCTTCACTTTTATTTTTCCC 57.392 29.630 0.00 0.00 0.00 3.97
5524 5997 9.869757 CTTTTTCCTTTTTCTCCTTCACTTTTA 57.130 29.630 0.00 0.00 0.00 1.52
5525 5998 8.593679 TCTTTTTCCTTTTTCTCCTTCACTTTT 58.406 29.630 0.00 0.00 0.00 2.27
5526 5999 8.134202 TCTTTTTCCTTTTTCTCCTTCACTTT 57.866 30.769 0.00 0.00 0.00 2.66
5527 6000 7.718334 TCTTTTTCCTTTTTCTCCTTCACTT 57.282 32.000 0.00 0.00 0.00 3.16
5528 6001 7.718334 TTCTTTTTCCTTTTTCTCCTTCACT 57.282 32.000 0.00 0.00 0.00 3.41
5529 6002 8.771920 TTTTCTTTTTCCTTTTTCTCCTTCAC 57.228 30.769 0.00 0.00 0.00 3.18
5555 6028 9.884636 CTTTTTCCTTTTTCTCCTTTCCTTTTA 57.115 29.630 0.00 0.00 0.00 1.52
5556 6029 8.602424 TCTTTTTCCTTTTTCTCCTTTCCTTTT 58.398 29.630 0.00 0.00 0.00 2.27
5557 6030 8.146053 TCTTTTTCCTTTTTCTCCTTTCCTTT 57.854 30.769 0.00 0.00 0.00 3.11
5558 6031 7.733773 TCTTTTTCCTTTTTCTCCTTTCCTT 57.266 32.000 0.00 0.00 0.00 3.36
5559 6032 7.733773 TTCTTTTTCCTTTTTCTCCTTTCCT 57.266 32.000 0.00 0.00 0.00 3.36
5560 6033 8.786826 TTTTCTTTTTCCTTTTTCTCCTTTCC 57.213 30.769 0.00 0.00 0.00 3.13
5561 6034 9.653287 TCTTTTCTTTTTCCTTTTTCTCCTTTC 57.347 29.630 0.00 0.00 0.00 2.62
5564 6037 9.658799 CTTTCTTTTCTTTTTCCTTTTTCTCCT 57.341 29.630 0.00 0.00 0.00 3.69
5565 6038 9.653287 TCTTTCTTTTCTTTTTCCTTTTTCTCC 57.347 29.630 0.00 0.00 0.00 3.71
5573 6046 8.690884 CCTCTTCTTCTTTCTTTTCTTTTTCCT 58.309 33.333 0.00 0.00 0.00 3.36
5574 6047 8.687242 TCCTCTTCTTCTTTCTTTTCTTTTTCC 58.313 33.333 0.00 0.00 0.00 3.13
5577 6050 8.690884 CCTTCCTCTTCTTCTTTCTTTTCTTTT 58.309 33.333 0.00 0.00 0.00 2.27
5578 6051 8.055790 TCCTTCCTCTTCTTCTTTCTTTTCTTT 58.944 33.333 0.00 0.00 0.00 2.52
5579 6052 7.578203 TCCTTCCTCTTCTTCTTTCTTTTCTT 58.422 34.615 0.00 0.00 0.00 2.52
5580 6053 7.142995 TCCTTCCTCTTCTTCTTTCTTTTCT 57.857 36.000 0.00 0.00 0.00 2.52
5581 6054 7.809546 TTCCTTCCTCTTCTTCTTTCTTTTC 57.190 36.000 0.00 0.00 0.00 2.29
5582 6055 7.286546 CCTTTCCTTCCTCTTCTTCTTTCTTTT 59.713 37.037 0.00 0.00 0.00 2.27
5583 6056 6.775142 CCTTTCCTTCCTCTTCTTCTTTCTTT 59.225 38.462 0.00 0.00 0.00 2.52
5584 6057 6.303054 CCTTTCCTTCCTCTTCTTCTTTCTT 58.697 40.000 0.00 0.00 0.00 2.52
5585 6058 5.222027 CCCTTTCCTTCCTCTTCTTCTTTCT 60.222 44.000 0.00 0.00 0.00 2.52
5586 6059 5.007034 CCCTTTCCTTCCTCTTCTTCTTTC 58.993 45.833 0.00 0.00 0.00 2.62
5587 6060 4.665483 TCCCTTTCCTTCCTCTTCTTCTTT 59.335 41.667 0.00 0.00 0.00 2.52
5588 6061 4.243643 TCCCTTTCCTTCCTCTTCTTCTT 58.756 43.478 0.00 0.00 0.00 2.52
5589 6062 3.843619 CTCCCTTTCCTTCCTCTTCTTCT 59.156 47.826 0.00 0.00 0.00 2.85
5590 6063 3.621214 GCTCCCTTTCCTTCCTCTTCTTC 60.621 52.174 0.00 0.00 0.00 2.87
5591 6064 2.307392 GCTCCCTTTCCTTCCTCTTCTT 59.693 50.000 0.00 0.00 0.00 2.52
5592 6065 1.912731 GCTCCCTTTCCTTCCTCTTCT 59.087 52.381 0.00 0.00 0.00 2.85
5593 6066 1.630878 TGCTCCCTTTCCTTCCTCTTC 59.369 52.381 0.00 0.00 0.00 2.87
5594 6067 1.632920 CTGCTCCCTTTCCTTCCTCTT 59.367 52.381 0.00 0.00 0.00 2.85
5595 6068 1.284313 CTGCTCCCTTTCCTTCCTCT 58.716 55.000 0.00 0.00 0.00 3.69
5596 6069 0.988063 ACTGCTCCCTTTCCTTCCTC 59.012 55.000 0.00 0.00 0.00 3.71
5597 6070 1.450360 AACTGCTCCCTTTCCTTCCT 58.550 50.000 0.00 0.00 0.00 3.36
5598 6071 3.434940 TTAACTGCTCCCTTTCCTTCC 57.565 47.619 0.00 0.00 0.00 3.46
5599 6072 5.243954 ACATTTTAACTGCTCCCTTTCCTTC 59.756 40.000 0.00 0.00 0.00 3.46
5600 6073 5.147767 ACATTTTAACTGCTCCCTTTCCTT 58.852 37.500 0.00 0.00 0.00 3.36
5601 6074 4.740902 ACATTTTAACTGCTCCCTTTCCT 58.259 39.130 0.00 0.00 0.00 3.36
5602 6075 4.767409 AGACATTTTAACTGCTCCCTTTCC 59.233 41.667 0.00 0.00 0.00 3.13
5603 6076 5.335976 CCAGACATTTTAACTGCTCCCTTTC 60.336 44.000 0.00 0.00 0.00 2.62
5604 6077 4.524328 CCAGACATTTTAACTGCTCCCTTT 59.476 41.667 0.00 0.00 0.00 3.11
5605 6078 4.082125 CCAGACATTTTAACTGCTCCCTT 58.918 43.478 0.00 0.00 0.00 3.95
5606 6079 3.562176 CCCAGACATTTTAACTGCTCCCT 60.562 47.826 0.00 0.00 0.00 4.20
5607 6080 2.755103 CCCAGACATTTTAACTGCTCCC 59.245 50.000 0.00 0.00 0.00 4.30
5608 6081 3.421844 ACCCAGACATTTTAACTGCTCC 58.578 45.455 0.00 0.00 0.00 4.70
5609 6082 5.221244 ACAAACCCAGACATTTTAACTGCTC 60.221 40.000 0.00 0.00 0.00 4.26
5610 6083 4.649218 ACAAACCCAGACATTTTAACTGCT 59.351 37.500 0.00 0.00 0.00 4.24
5611 6084 4.944048 ACAAACCCAGACATTTTAACTGC 58.056 39.130 0.00 0.00 0.00 4.40
5612 6085 7.712797 ACTTACAAACCCAGACATTTTAACTG 58.287 34.615 0.00 0.00 0.00 3.16
5613 6086 7.891498 ACTTACAAACCCAGACATTTTAACT 57.109 32.000 0.00 0.00 0.00 2.24
5614 6087 8.192110 TGAACTTACAAACCCAGACATTTTAAC 58.808 33.333 0.00 0.00 0.00 2.01
5615 6088 8.294954 TGAACTTACAAACCCAGACATTTTAA 57.705 30.769 0.00 0.00 0.00 1.52
5616 6089 7.883391 TGAACTTACAAACCCAGACATTTTA 57.117 32.000 0.00 0.00 0.00 1.52
5617 6090 6.783708 TGAACTTACAAACCCAGACATTTT 57.216 33.333 0.00 0.00 0.00 1.82
5618 6091 6.976934 ATGAACTTACAAACCCAGACATTT 57.023 33.333 0.00 0.00 0.00 2.32
5619 6092 6.549364 TCAATGAACTTACAAACCCAGACATT 59.451 34.615 0.00 0.00 0.00 2.71
5620 6093 6.068010 TCAATGAACTTACAAACCCAGACAT 58.932 36.000 0.00 0.00 0.00 3.06
5621 6094 5.441500 TCAATGAACTTACAAACCCAGACA 58.558 37.500 0.00 0.00 0.00 3.41
5622 6095 6.575162 ATCAATGAACTTACAAACCCAGAC 57.425 37.500 0.00 0.00 0.00 3.51
5623 6096 7.595819 AAATCAATGAACTTACAAACCCAGA 57.404 32.000 0.00 0.00 0.00 3.86
5624 6097 8.661352 AAAAATCAATGAACTTACAAACCCAG 57.339 30.769 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.