Multiple sequence alignment - TraesCS1B01G236500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G236500 chr1B 100.000 5163 0 0 1 5163 423638463 423643625 0.000000e+00 9535.0
1 TraesCS1B01G236500 chr1B 90.865 208 16 3 3376 3581 423641456 423641662 5.090000e-70 276.0
2 TraesCS1B01G236500 chr1B 90.865 208 16 3 2994 3200 423641838 423642043 5.090000e-70 276.0
3 TraesCS1B01G236500 chr1B 92.857 168 12 0 715 882 225584940 225584773 1.440000e-60 244.0
4 TraesCS1B01G236500 chr1B 89.944 179 15 2 3325 3503 423641614 423641789 1.450000e-55 228.0
5 TraesCS1B01G236500 chr1B 89.944 179 15 2 3152 3327 423641787 423641965 1.450000e-55 228.0
6 TraesCS1B01G236500 chr1B 86.154 130 14 4 3201 3327 423641455 423641583 2.510000e-28 137.0
7 TraesCS1B01G236500 chr1B 86.154 130 14 4 2993 3121 423641663 423641789 2.510000e-28 137.0
8 TraesCS1B01G236500 chr1B 89.130 92 10 0 1727 1818 614972628 614972537 1.170000e-21 115.0
9 TraesCS1B01G236500 chr1B 84.259 108 11 4 4830 4931 12755252 12755359 3.290000e-17 100.0
10 TraesCS1B01G236500 chr1D 92.595 1418 67 18 1925 3327 313293229 313294623 0.000000e+00 2002.0
11 TraesCS1B01G236500 chr1D 96.530 778 21 4 952 1728 313292386 313293158 0.000000e+00 1282.0
12 TraesCS1B01G236500 chr1D 92.065 857 47 11 3645 4494 313295262 313296104 0.000000e+00 1186.0
13 TraesCS1B01G236500 chr1D 94.055 656 30 7 2997 3647 313294499 313295150 0.000000e+00 987.0
14 TraesCS1B01G236500 chr1D 88.803 259 20 4 3325 3581 313294448 313294699 5.020000e-80 309.0
15 TraesCS1B01G236500 chr1D 97.222 180 4 1 4985 5163 313296385 313296564 2.340000e-78 303.0
16 TraesCS1B01G236500 chr1D 92.308 208 10 3 3376 3581 313294290 313294493 1.820000e-74 291.0
17 TraesCS1B01G236500 chr1D 91.304 207 18 0 2992 3198 313294875 313295081 3.040000e-72 283.0
18 TraesCS1B01G236500 chr1D 91.061 179 13 2 3152 3327 313294826 313295004 6.680000e-59 239.0
19 TraesCS1B01G236500 chr1D 87.778 180 16 3 3325 3503 313294654 313294828 6.780000e-49 206.0
20 TraesCS1B01G236500 chr1D 93.407 91 3 3 1822 1909 313293157 313293247 1.170000e-26 132.0
21 TraesCS1B01G236500 chr1A 91.271 1031 65 12 3376 4394 393458247 393459264 0.000000e+00 1382.0
22 TraesCS1B01G236500 chr1A 90.347 1036 69 21 891 1909 393456186 393457207 0.000000e+00 1330.0
23 TraesCS1B01G236500 chr1A 92.141 878 43 9 1925 2778 393457189 393458064 0.000000e+00 1216.0
24 TraesCS1B01G236500 chr1A 81.684 748 95 25 3459 4202 504954861 504954152 7.450000e-163 584.0
25 TraesCS1B01G236500 chr1A 81.283 748 98 25 3459 4202 504953952 504953243 7.500000e-158 568.0
26 TraesCS1B01G236500 chr1A 89.810 422 38 4 2779 3200 393458037 393458453 2.120000e-148 536.0
27 TraesCS1B01G236500 chr1A 87.705 244 20 8 4924 5158 393461308 393461550 5.090000e-70 276.0
28 TraesCS1B01G236500 chr1A 90.698 129 9 2 3202 3327 393458246 393458374 8.890000e-38 169.0
29 TraesCS1B01G236500 chr1A 91.743 109 8 1 4386 4494 393460512 393460619 3.220000e-32 150.0
30 TraesCS1B01G236500 chr7B 92.797 708 42 6 1 703 340522357 340523060 0.000000e+00 1016.0
31 TraesCS1B01G236500 chr7B 90.986 710 55 6 1 704 713636854 713636148 0.000000e+00 948.0
32 TraesCS1B01G236500 chr7B 90.678 708 58 5 1 703 180425902 180425198 0.000000e+00 935.0
33 TraesCS1B01G236500 chr7B 92.814 167 12 0 716 882 119792584 119792418 5.170000e-60 243.0
34 TraesCS1B01G236500 chr7B 91.765 170 9 1 4544 4708 516791760 516791929 1.120000e-56 231.0
35 TraesCS1B01G236500 chr7B 91.667 84 7 0 1735 1818 686649766 686649683 3.270000e-22 117.0
36 TraesCS1B01G236500 chr7B 89.011 91 10 0 1727 1817 475661916 475661826 4.230000e-21 113.0
37 TraesCS1B01G236500 chr3B 89.747 712 51 10 1 704 658499990 658500687 0.000000e+00 891.0
38 TraesCS1B01G236500 chr3B 86.787 719 77 13 1 707 663472145 663471433 0.000000e+00 785.0
39 TraesCS1B01G236500 chr3B 93.865 163 10 0 715 877 78846718 78846880 3.990000e-61 246.0
40 TraesCS1B01G236500 chr3B 93.373 166 11 0 715 880 800931848 800931683 3.990000e-61 246.0
41 TraesCS1B01G236500 chr3B 92.216 167 8 1 4543 4704 684066214 684066048 1.120000e-56 231.0
42 TraesCS1B01G236500 chr5B 90.014 691 54 10 25 703 681525710 681526397 0.000000e+00 880.0
43 TraesCS1B01G236500 chr5B 88.462 728 54 8 1 703 697419211 697419933 0.000000e+00 852.0
44 TraesCS1B01G236500 chr5D 89.185 712 64 8 1 703 424082297 424081590 0.000000e+00 876.0
45 TraesCS1B01G236500 chr5D 80.299 1005 125 41 3459 4457 439553331 439554268 0.000000e+00 691.0
46 TraesCS1B01G236500 chr5D 91.228 171 10 1 4543 4708 498722073 498721903 1.450000e-55 228.0
47 TraesCS1B01G236500 chr5D 89.130 92 10 0 1727 1818 134782206 134782115 1.170000e-21 115.0
48 TraesCS1B01G236500 chr3D 87.587 717 69 14 1 703 579780543 579781253 0.000000e+00 813.0
49 TraesCS1B01G236500 chr3D 87.413 715 73 10 1 703 307095573 307094864 0.000000e+00 806.0
50 TraesCS1B01G236500 chr3D 92.814 167 12 0 714 880 563963105 563962939 5.170000e-60 243.0
51 TraesCS1B01G236500 chr3D 92.169 166 8 1 4544 4704 486424952 486424787 4.020000e-56 230.0
52 TraesCS1B01G236500 chr3D 91.667 168 9 1 4542 4704 612710150 612709983 1.450000e-55 228.0
53 TraesCS1B01G236500 chr3D 91.667 84 7 0 1726 1809 360046460 360046543 3.270000e-22 117.0
54 TraesCS1B01G236500 chr2A 80.378 1004 127 38 3459 4457 406993964 406994902 0.000000e+00 699.0
55 TraesCS1B01G236500 chr2A 80.378 1004 125 41 3459 4457 407122465 407123401 0.000000e+00 697.0
56 TraesCS1B01G236500 chr2A 90.164 183 16 2 711 892 117850289 117850108 2.400000e-58 237.0
57 TraesCS1B01G236500 chr4B 88.328 317 30 5 3459 3773 128943922 128943611 1.760000e-99 374.0
58 TraesCS1B01G236500 chr4B 91.667 84 7 0 1735 1818 6014273 6014356 3.270000e-22 117.0
59 TraesCS1B01G236500 chr2B 88.291 316 28 8 3459 3770 39149294 39149604 2.270000e-98 370.0
60 TraesCS1B01G236500 chr2B 90.811 185 15 2 712 895 638523007 638522824 3.990000e-61 246.0
61 TraesCS1B01G236500 chr2B 91.228 171 10 1 4547 4712 797534656 797534826 1.450000e-55 228.0
62 TraesCS1B01G236500 chr2B 89.706 68 2 2 1 63 493660406 493660339 1.190000e-11 82.4
63 TraesCS1B01G236500 chr6B 93.452 168 11 0 716 883 152213160 152212993 3.090000e-62 250.0
64 TraesCS1B01G236500 chr6B 82.432 148 22 4 1925 2071 480655577 480655721 5.430000e-25 126.0
65 TraesCS1B01G236500 chr7D 92.353 170 13 0 711 880 66835091 66834922 5.170000e-60 243.0
66 TraesCS1B01G236500 chr7D 88.649 185 14 3 4532 4709 604139164 604139348 8.700000e-53 219.0
67 TraesCS1B01G236500 chr7D 88.043 92 11 0 1727 1818 395073766 395073675 5.470000e-20 110.0
68 TraesCS1B01G236500 chrUn 93.865 163 5 1 4547 4704 115107902 115108064 1.860000e-59 241.0
69 TraesCS1B01G236500 chr4D 92.262 168 8 1 4542 4704 468208811 468208644 3.110000e-57 233.0
70 TraesCS1B01G236500 chr6D 91.667 84 7 0 1727 1810 355436700 355436617 3.270000e-22 117.0
71 TraesCS1B01G236500 chr4A 91.667 84 7 0 1735 1818 577472480 577472563 3.270000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G236500 chr1B 423638463 423643625 5162 False 1545.285714 9535 90.560857 1 5163 7 chr1B.!!$F2 5162
1 TraesCS1B01G236500 chr1D 313292386 313296564 4178 False 656.363636 2002 92.466182 952 5163 11 chr1D.!!$F1 4211
2 TraesCS1B01G236500 chr1A 393456186 393461550 5364 False 722.714286 1382 90.530714 891 5158 7 chr1A.!!$F1 4267
3 TraesCS1B01G236500 chr1A 504953243 504954861 1618 True 576.000000 584 81.483500 3459 4202 2 chr1A.!!$R1 743
4 TraesCS1B01G236500 chr7B 340522357 340523060 703 False 1016.000000 1016 92.797000 1 703 1 chr7B.!!$F1 702
5 TraesCS1B01G236500 chr7B 713636148 713636854 706 True 948.000000 948 90.986000 1 704 1 chr7B.!!$R5 703
6 TraesCS1B01G236500 chr7B 180425198 180425902 704 True 935.000000 935 90.678000 1 703 1 chr7B.!!$R2 702
7 TraesCS1B01G236500 chr3B 658499990 658500687 697 False 891.000000 891 89.747000 1 704 1 chr3B.!!$F2 703
8 TraesCS1B01G236500 chr3B 663471433 663472145 712 True 785.000000 785 86.787000 1 707 1 chr3B.!!$R1 706
9 TraesCS1B01G236500 chr5B 681525710 681526397 687 False 880.000000 880 90.014000 25 703 1 chr5B.!!$F1 678
10 TraesCS1B01G236500 chr5B 697419211 697419933 722 False 852.000000 852 88.462000 1 703 1 chr5B.!!$F2 702
11 TraesCS1B01G236500 chr5D 424081590 424082297 707 True 876.000000 876 89.185000 1 703 1 chr5D.!!$R2 702
12 TraesCS1B01G236500 chr5D 439553331 439554268 937 False 691.000000 691 80.299000 3459 4457 1 chr5D.!!$F1 998
13 TraesCS1B01G236500 chr3D 579780543 579781253 710 False 813.000000 813 87.587000 1 703 1 chr3D.!!$F2 702
14 TraesCS1B01G236500 chr3D 307094864 307095573 709 True 806.000000 806 87.413000 1 703 1 chr3D.!!$R1 702
15 TraesCS1B01G236500 chr2A 406993964 406994902 938 False 699.000000 699 80.378000 3459 4457 1 chr2A.!!$F1 998
16 TraesCS1B01G236500 chr2A 407122465 407123401 936 False 697.000000 697 80.378000 3459 4457 1 chr2A.!!$F2 998

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 791 0.109132 CGGCTCCAGGAATTTGCAAC 60.109 55.000 0.0 0.0 0.0 4.17 F
1744 1804 0.037975 GTACTCGCCCCGTCTCAAAA 60.038 55.000 0.0 0.0 0.0 2.44 F
2662 2764 1.076332 GTATTGCACTCGTTCGGCTT 58.924 50.000 0.0 0.0 0.0 4.35 F
4040 4475 1.002792 GGACGGAACAGAAACAGCAAC 60.003 52.381 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2390 2466 0.102300 TGTCCATAGTGACATCCGCG 59.898 55.0 0.0 0.0 40.22 6.46 R
3052 3361 0.182775 ACCTACGCCCCAATTCCATC 59.817 55.0 0.0 0.0 0.00 3.51 R
4069 4504 0.322816 TCGCCCTCTACCGTGTTACT 60.323 55.0 0.0 0.0 0.00 2.24 R
4887 6941 0.035152 TCGCAGGCAGAAATGGATGT 60.035 50.0 0.0 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 125 6.588204 TGTCAACCTATGTATCCAACCATAC 58.412 40.000 0.00 0.00 0.00 2.39
146 161 9.705103 ATAAAATAAACTAAACTAGGGTTCCCC 57.295 33.333 4.02 0.00 45.90 4.81
160 175 3.135712 GGGTTCCCCAAATCAAACAAACT 59.864 43.478 0.00 0.00 44.65 2.66
259 291 6.749036 TTCTATGGATAGAAAGAAGGGGAC 57.251 41.667 6.63 0.00 44.07 4.46
320 352 2.159156 CCACGGACCAAATCGTCAGATA 60.159 50.000 0.00 0.00 37.53 1.98
367 400 2.042843 GGGAGAGGAGGAAGCCGA 60.043 66.667 0.00 0.00 0.00 5.54
413 454 0.856982 AACAAATGGGTGAGGTGGGA 59.143 50.000 0.00 0.00 0.00 4.37
446 488 1.202580 GGCGACTGGCATCTAAGTCAT 60.203 52.381 4.93 0.00 46.16 3.06
504 554 2.052690 GTGGTGCCTAGCTCGGAGA 61.053 63.158 8.81 0.00 0.00 3.71
706 758 4.834357 AAAATTGTCAATTTTGCCTGCC 57.166 36.364 27.61 0.00 46.30 4.85
707 759 2.477845 ATTGTCAATTTTGCCTGCCC 57.522 45.000 0.00 0.00 0.00 5.36
708 760 1.422531 TTGTCAATTTTGCCTGCCCT 58.577 45.000 0.00 0.00 0.00 5.19
709 761 2.300956 TGTCAATTTTGCCTGCCCTA 57.699 45.000 0.00 0.00 0.00 3.53
710 762 2.603021 TGTCAATTTTGCCTGCCCTAA 58.397 42.857 0.00 0.00 0.00 2.69
711 763 2.298729 TGTCAATTTTGCCTGCCCTAAC 59.701 45.455 0.00 0.00 0.00 2.34
712 764 1.543802 TCAATTTTGCCTGCCCTAACG 59.456 47.619 0.00 0.00 0.00 3.18
713 765 0.894835 AATTTTGCCTGCCCTAACGG 59.105 50.000 0.00 0.00 0.00 4.44
734 786 2.763215 TGGCGGCTCCAGGAATTT 59.237 55.556 11.43 0.00 40.72 1.82
735 787 1.678635 TGGCGGCTCCAGGAATTTG 60.679 57.895 11.43 0.00 40.72 2.32
736 788 2.491621 GCGGCTCCAGGAATTTGC 59.508 61.111 0.00 0.00 0.00 3.68
737 789 2.342650 GCGGCTCCAGGAATTTGCA 61.343 57.895 1.09 0.00 0.00 4.08
738 790 1.876497 GCGGCTCCAGGAATTTGCAA 61.876 55.000 0.00 0.00 0.00 4.08
739 791 0.109132 CGGCTCCAGGAATTTGCAAC 60.109 55.000 0.00 0.00 0.00 4.17
740 792 0.247460 GGCTCCAGGAATTTGCAACC 59.753 55.000 0.00 0.00 0.00 3.77
741 793 0.109132 GCTCCAGGAATTTGCAACCG 60.109 55.000 0.00 0.00 0.00 4.44
742 794 0.527565 CTCCAGGAATTTGCAACCGG 59.472 55.000 0.00 0.00 0.00 5.28
743 795 0.111446 TCCAGGAATTTGCAACCGGA 59.889 50.000 9.46 6.37 0.00 5.14
744 796 1.185315 CCAGGAATTTGCAACCGGAT 58.815 50.000 9.46 0.00 0.00 4.18
745 797 2.025793 TCCAGGAATTTGCAACCGGATA 60.026 45.455 9.46 0.00 0.00 2.59
746 798 2.958355 CCAGGAATTTGCAACCGGATAT 59.042 45.455 9.46 0.00 0.00 1.63
747 799 3.384467 CCAGGAATTTGCAACCGGATATT 59.616 43.478 9.46 0.00 0.00 1.28
748 800 4.499696 CCAGGAATTTGCAACCGGATATTC 60.500 45.833 9.46 4.64 32.57 1.75
749 801 4.097741 CAGGAATTTGCAACCGGATATTCA 59.902 41.667 9.46 0.00 34.20 2.57
750 802 4.895297 AGGAATTTGCAACCGGATATTCAT 59.105 37.500 9.46 9.99 34.20 2.57
751 803 5.010012 AGGAATTTGCAACCGGATATTCATC 59.990 40.000 9.46 0.00 34.20 2.92
752 804 5.010012 GGAATTTGCAACCGGATATTCATCT 59.990 40.000 9.46 0.00 34.20 2.90
753 805 4.898829 TTTGCAACCGGATATTCATCTG 57.101 40.909 9.46 0.00 37.30 2.90
754 806 3.558931 TGCAACCGGATATTCATCTGT 57.441 42.857 9.46 0.00 36.00 3.41
755 807 4.681074 TGCAACCGGATATTCATCTGTA 57.319 40.909 9.46 0.00 36.00 2.74
756 808 5.227569 TGCAACCGGATATTCATCTGTAT 57.772 39.130 9.46 0.00 36.00 2.29
757 809 5.620206 TGCAACCGGATATTCATCTGTATT 58.380 37.500 9.46 0.00 36.00 1.89
758 810 5.700832 TGCAACCGGATATTCATCTGTATTC 59.299 40.000 9.46 0.00 36.00 1.75
759 811 5.700832 GCAACCGGATATTCATCTGTATTCA 59.299 40.000 9.46 0.00 36.00 2.57
760 812 6.372659 GCAACCGGATATTCATCTGTATTCAT 59.627 38.462 9.46 0.00 36.00 2.57
761 813 7.094634 GCAACCGGATATTCATCTGTATTCATT 60.095 37.037 9.46 0.00 36.00 2.57
762 814 8.786898 CAACCGGATATTCATCTGTATTCATTT 58.213 33.333 9.46 0.00 36.00 2.32
763 815 8.924511 ACCGGATATTCATCTGTATTCATTTT 57.075 30.769 9.46 0.00 36.00 1.82
764 816 8.786898 ACCGGATATTCATCTGTATTCATTTTG 58.213 33.333 9.46 0.00 36.00 2.44
765 817 7.752239 CCGGATATTCATCTGTATTCATTTTGC 59.248 37.037 0.00 0.00 36.00 3.68
766 818 7.752239 CGGATATTCATCTGTATTCATTTTGCC 59.248 37.037 0.00 0.00 33.48 4.52
767 819 8.579006 GGATATTCATCTGTATTCATTTTGCCA 58.421 33.333 0.00 0.00 0.00 4.92
768 820 9.970395 GATATTCATCTGTATTCATTTTGCCAA 57.030 29.630 0.00 0.00 0.00 4.52
771 823 9.675464 ATTCATCTGTATTCATTTTGCCAAAAT 57.325 25.926 9.57 9.57 41.57 1.82
772 824 8.706492 TCATCTGTATTCATTTTGCCAAAATC 57.294 30.769 12.34 2.49 38.97 2.17
773 825 8.312564 TCATCTGTATTCATTTTGCCAAAATCA 58.687 29.630 12.34 6.72 38.97 2.57
774 826 9.104965 CATCTGTATTCATTTTGCCAAAATCAT 57.895 29.630 12.34 10.04 38.97 2.45
775 827 9.675464 ATCTGTATTCATTTTGCCAAAATCATT 57.325 25.926 12.34 0.00 38.97 2.57
776 828 8.937884 TCTGTATTCATTTTGCCAAAATCATTG 58.062 29.630 12.34 3.89 38.97 2.82
777 829 8.618702 TGTATTCATTTTGCCAAAATCATTGT 57.381 26.923 12.34 1.36 38.97 2.71
778 830 9.064706 TGTATTCATTTTGCCAAAATCATTGTT 57.935 25.926 12.34 0.22 38.97 2.83
779 831 9.332301 GTATTCATTTTGCCAAAATCATTGTTG 57.668 29.630 12.34 2.15 38.97 3.33
780 832 6.939132 TCATTTTGCCAAAATCATTGTTGT 57.061 29.167 12.34 0.00 38.97 3.32
781 833 7.330900 TCATTTTGCCAAAATCATTGTTGTT 57.669 28.000 12.34 0.00 38.97 2.83
782 834 7.769220 TCATTTTGCCAAAATCATTGTTGTTT 58.231 26.923 12.34 0.00 38.97 2.83
783 835 8.248945 TCATTTTGCCAAAATCATTGTTGTTTT 58.751 25.926 12.34 0.00 38.97 2.43
784 836 8.870879 CATTTTGCCAAAATCATTGTTGTTTTT 58.129 25.926 12.34 0.00 38.97 1.94
785 837 8.458212 TTTTGCCAAAATCATTGTTGTTTTTC 57.542 26.923 0.00 0.00 34.20 2.29
786 838 6.748333 TGCCAAAATCATTGTTGTTTTTCA 57.252 29.167 0.00 0.00 34.20 2.69
787 839 7.149569 TGCCAAAATCATTGTTGTTTTTCAA 57.850 28.000 0.00 0.00 34.20 2.69
788 840 7.596494 TGCCAAAATCATTGTTGTTTTTCAAA 58.404 26.923 0.00 0.00 37.81 2.69
789 841 8.084073 TGCCAAAATCATTGTTGTTTTTCAAAA 58.916 25.926 0.00 0.00 37.81 2.44
790 842 8.919661 GCCAAAATCATTGTTGTTTTTCAAAAA 58.080 25.926 0.00 0.00 37.61 1.94
816 868 9.868277 ATTGTAACTCTTTTGTCAAAATCAACA 57.132 25.926 11.09 8.77 0.00 3.33
817 869 8.682128 TGTAACTCTTTTGTCAAAATCAACAC 57.318 30.769 11.09 7.86 0.00 3.32
818 870 8.519526 TGTAACTCTTTTGTCAAAATCAACACT 58.480 29.630 11.09 0.00 0.00 3.55
819 871 7.816945 AACTCTTTTGTCAAAATCAACACTG 57.183 32.000 11.09 0.00 0.00 3.66
820 872 6.924111 ACTCTTTTGTCAAAATCAACACTGT 58.076 32.000 11.09 0.61 0.00 3.55
821 873 7.378181 ACTCTTTTGTCAAAATCAACACTGTT 58.622 30.769 11.09 0.00 0.00 3.16
822 874 7.872483 ACTCTTTTGTCAAAATCAACACTGTTT 59.128 29.630 11.09 0.00 0.00 2.83
823 875 8.600449 TCTTTTGTCAAAATCAACACTGTTTT 57.400 26.923 11.09 0.00 0.00 2.43
824 876 8.494347 TCTTTTGTCAAAATCAACACTGTTTTG 58.506 29.630 11.09 0.29 41.69 2.44
825 877 7.721286 TTTGTCAAAATCAACACTGTTTTGT 57.279 28.000 6.58 0.00 41.30 2.83
826 878 8.818141 TTTGTCAAAATCAACACTGTTTTGTA 57.182 26.923 6.58 0.00 41.30 2.41
827 879 8.818141 TTGTCAAAATCAACACTGTTTTGTAA 57.182 26.923 6.58 4.79 41.30 2.41
828 880 8.818141 TGTCAAAATCAACACTGTTTTGTAAA 57.182 26.923 6.58 0.00 41.30 2.01
829 881 9.261180 TGTCAAAATCAACACTGTTTTGTAAAA 57.739 25.926 6.58 0.00 41.30 1.52
835 887 7.499438 TCAACACTGTTTTGTAAAAATCACG 57.501 32.000 6.58 0.00 0.00 4.35
836 888 6.528423 TCAACACTGTTTTGTAAAAATCACGG 59.472 34.615 6.58 0.00 0.00 4.94
837 889 5.344884 ACACTGTTTTGTAAAAATCACGGG 58.655 37.500 0.00 0.00 0.00 5.28
838 890 5.105675 ACACTGTTTTGTAAAAATCACGGGT 60.106 36.000 0.00 0.00 0.00 5.28
839 891 5.231147 CACTGTTTTGTAAAAATCACGGGTG 59.769 40.000 0.00 0.00 0.00 4.61
840 892 5.105675 ACTGTTTTGTAAAAATCACGGGTGT 60.106 36.000 0.00 0.00 0.00 4.16
841 893 5.721232 TGTTTTGTAAAAATCACGGGTGTT 58.279 33.333 0.00 0.00 0.00 3.32
842 894 5.805994 TGTTTTGTAAAAATCACGGGTGTTC 59.194 36.000 0.00 0.00 0.00 3.18
843 895 5.578005 TTTGTAAAAATCACGGGTGTTCA 57.422 34.783 0.00 0.00 0.00 3.18
844 896 4.555348 TGTAAAAATCACGGGTGTTCAC 57.445 40.909 0.00 0.00 0.00 3.18
845 897 3.945921 TGTAAAAATCACGGGTGTTCACA 59.054 39.130 5.32 0.00 0.00 3.58
846 898 4.580995 TGTAAAAATCACGGGTGTTCACAT 59.419 37.500 5.32 0.00 0.00 3.21
847 899 3.641437 AAAATCACGGGTGTTCACATG 57.359 42.857 5.32 0.00 0.00 3.21
848 900 2.559698 AATCACGGGTGTTCACATGA 57.440 45.000 0.00 5.92 0.00 3.07
849 901 2.559698 ATCACGGGTGTTCACATGAA 57.440 45.000 0.00 0.00 0.00 2.57
850 902 1.877637 TCACGGGTGTTCACATGAAG 58.122 50.000 0.00 0.00 34.27 3.02
851 903 1.414550 TCACGGGTGTTCACATGAAGA 59.585 47.619 0.00 0.00 34.27 2.87
852 904 1.531149 CACGGGTGTTCACATGAAGAC 59.469 52.381 12.28 12.28 44.61 3.01
857 909 3.795561 GTGTTCACATGAAGACCGAAG 57.204 47.619 10.08 0.00 40.99 3.79
858 910 3.390135 GTGTTCACATGAAGACCGAAGA 58.610 45.455 10.08 0.00 40.99 2.87
859 911 3.807622 GTGTTCACATGAAGACCGAAGAA 59.192 43.478 10.08 0.00 40.99 2.52
860 912 4.452455 GTGTTCACATGAAGACCGAAGAAT 59.548 41.667 10.08 0.00 40.99 2.40
861 913 5.637810 GTGTTCACATGAAGACCGAAGAATA 59.362 40.000 10.08 0.00 40.99 1.75
862 914 5.637810 TGTTCACATGAAGACCGAAGAATAC 59.362 40.000 0.00 0.00 34.27 1.89
863 915 4.755411 TCACATGAAGACCGAAGAATACC 58.245 43.478 0.00 0.00 0.00 2.73
864 916 3.871594 CACATGAAGACCGAAGAATACCC 59.128 47.826 0.00 0.00 0.00 3.69
865 917 3.118371 ACATGAAGACCGAAGAATACCCC 60.118 47.826 0.00 0.00 0.00 4.95
866 918 2.829023 TGAAGACCGAAGAATACCCCT 58.171 47.619 0.00 0.00 0.00 4.79
867 919 3.985127 TGAAGACCGAAGAATACCCCTA 58.015 45.455 0.00 0.00 0.00 3.53
868 920 3.958798 TGAAGACCGAAGAATACCCCTAG 59.041 47.826 0.00 0.00 0.00 3.02
869 921 2.317973 AGACCGAAGAATACCCCTAGC 58.682 52.381 0.00 0.00 0.00 3.42
870 922 2.037144 GACCGAAGAATACCCCTAGCA 58.963 52.381 0.00 0.00 0.00 3.49
871 923 1.761198 ACCGAAGAATACCCCTAGCAC 59.239 52.381 0.00 0.00 0.00 4.40
872 924 1.269621 CCGAAGAATACCCCTAGCACG 60.270 57.143 0.00 0.00 0.00 5.34
873 925 1.269621 CGAAGAATACCCCTAGCACGG 60.270 57.143 0.00 0.00 0.00 4.94
874 926 0.468648 AAGAATACCCCTAGCACGGC 59.531 55.000 0.00 0.00 0.00 5.68
875 927 1.070957 GAATACCCCTAGCACGGCC 59.929 63.158 0.00 0.00 0.00 6.13
876 928 2.393144 GAATACCCCTAGCACGGCCC 62.393 65.000 0.00 0.00 0.00 5.80
903 955 2.406616 CGGCAGGGTGGCAATACAC 61.407 63.158 0.00 0.00 43.94 2.90
904 956 1.304052 GGCAGGGTGGCAATACACA 60.304 57.895 0.00 0.00 43.14 3.72
911 963 2.577490 TGGCAATACACATGGCACC 58.423 52.632 0.00 0.00 46.85 5.01
930 982 1.685765 ATGTCGGCTGTAGGCAGGA 60.686 57.895 6.26 0.00 42.78 3.86
985 1037 3.771479 GGAAGCCCTTGGATTGAAATCTT 59.229 43.478 3.21 0.00 35.73 2.40
1033 1085 2.409870 CGAATTGTGCTCCAGCCCC 61.410 63.158 0.00 0.00 41.18 5.80
1034 1086 2.037847 AATTGTGCTCCAGCCCCC 59.962 61.111 0.00 0.00 41.18 5.40
1035 1087 2.786512 GAATTGTGCTCCAGCCCCCA 62.787 60.000 0.00 0.00 41.18 4.96
1036 1088 2.793317 AATTGTGCTCCAGCCCCCAG 62.793 60.000 0.00 0.00 41.18 4.45
1066 1124 3.388913 CTCCTTTTCCCCCTCACTCTAT 58.611 50.000 0.00 0.00 0.00 1.98
1141 1200 2.041081 TCAACCCAGATCGGAAACCAAT 59.959 45.455 5.32 0.00 36.56 3.16
1155 1214 3.585990 CAATCCGCCGCCATGTCC 61.586 66.667 0.00 0.00 0.00 4.02
1216 1275 2.043953 AGGCCGGGCTGAATTTCC 60.044 61.111 32.33 5.10 0.00 3.13
1220 1279 1.948721 GCCGGGCTGAATTTCCCAAG 61.949 60.000 12.87 4.12 42.75 3.61
1229 1288 2.721906 TGAATTTCCCAAGTTCCTCCCT 59.278 45.455 0.00 0.00 0.00 4.20
1255 1314 3.170360 GGTTGACGAATCCCCCTTC 57.830 57.895 0.00 0.00 0.00 3.46
1633 1692 2.930385 ATCTGTTCCGGGCATCTGCG 62.930 60.000 0.00 0.00 43.26 5.18
1724 1784 0.104855 TGTTGCGGATAGGCTAGCTG 59.895 55.000 15.72 14.18 0.00 4.24
1731 1791 1.813786 GGATAGGCTAGCTGGTACTCG 59.186 57.143 15.72 0.00 0.00 4.18
1732 1792 1.200484 GATAGGCTAGCTGGTACTCGC 59.800 57.143 15.72 0.00 0.00 5.03
1733 1793 0.822532 TAGGCTAGCTGGTACTCGCC 60.823 60.000 15.72 7.36 46.27 5.54
1736 1796 2.831742 TAGCTGGTACTCGCCCCG 60.832 66.667 0.00 0.00 0.00 5.73
1738 1798 4.509737 GCTGGTACTCGCCCCGTC 62.510 72.222 0.00 0.00 0.00 4.79
1739 1799 2.754658 CTGGTACTCGCCCCGTCT 60.755 66.667 0.00 0.00 0.00 4.18
1744 1804 0.037975 GTACTCGCCCCGTCTCAAAA 60.038 55.000 0.00 0.00 0.00 2.44
1747 1807 1.276989 ACTCGCCCCGTCTCAAAATAA 59.723 47.619 0.00 0.00 0.00 1.40
1748 1808 1.933853 CTCGCCCCGTCTCAAAATAAG 59.066 52.381 0.00 0.00 0.00 1.73
1749 1809 1.276989 TCGCCCCGTCTCAAAATAAGT 59.723 47.619 0.00 0.00 0.00 2.24
1752 1812 2.418976 GCCCCGTCTCAAAATAAGTGTC 59.581 50.000 0.00 0.00 0.00 3.67
1753 1813 3.868754 GCCCCGTCTCAAAATAAGTGTCT 60.869 47.826 0.00 0.00 0.00 3.41
1757 1817 4.092091 CCGTCTCAAAATAAGTGTCTCAGC 59.908 45.833 0.00 0.00 0.00 4.26
1758 1818 4.926238 CGTCTCAAAATAAGTGTCTCAGCT 59.074 41.667 0.00 0.00 0.00 4.24
1759 1819 5.406780 CGTCTCAAAATAAGTGTCTCAGCTT 59.593 40.000 0.00 0.00 0.00 3.74
1761 1821 7.116376 CGTCTCAAAATAAGTGTCTCAGCTTTA 59.884 37.037 0.00 0.00 0.00 1.85
1762 1822 8.940952 GTCTCAAAATAAGTGTCTCAGCTTTAT 58.059 33.333 0.00 0.00 0.00 1.40
1765 1825 9.944376 TCAAAATAAGTGTCTCAGCTTTATACT 57.056 29.630 0.00 0.00 0.00 2.12
1771 1831 7.948034 AGTGTCTCAGCTTTATACTAACTCT 57.052 36.000 0.00 0.00 0.00 3.24
1772 1832 9.463902 AAGTGTCTCAGCTTTATACTAACTCTA 57.536 33.333 0.00 0.00 0.00 2.43
1773 1833 9.116067 AGTGTCTCAGCTTTATACTAACTCTAG 57.884 37.037 0.00 0.00 0.00 2.43
1774 1834 8.895737 GTGTCTCAGCTTTATACTAACTCTAGT 58.104 37.037 0.00 0.00 41.43 2.57
1810 1880 8.706322 ATTAAGGTTGAGACACTTATTTTGGT 57.294 30.769 0.00 0.00 0.00 3.67
1813 1883 6.838382 AGGTTGAGACACTTATTTTGGTACT 58.162 36.000 0.00 0.00 0.00 2.73
1818 1888 6.042781 TGAGACACTTATTTTGGTACTGAGGT 59.957 38.462 0.00 0.00 0.00 3.85
1819 1889 6.231211 AGACACTTATTTTGGTACTGAGGTG 58.769 40.000 0.00 0.00 0.00 4.00
1820 1890 5.937111 ACACTTATTTTGGTACTGAGGTGT 58.063 37.500 0.00 0.00 0.00 4.16
1864 1936 4.496341 CGTGATGCGCTTCCTCATTAATTT 60.496 41.667 19.40 0.00 0.00 1.82
1888 1961 7.615582 TGAAATGAGTATGTTTCCTCATGAC 57.384 36.000 3.15 2.41 45.32 3.06
1891 1964 4.104086 TGAGTATGTTTCCTCATGACCCT 58.896 43.478 0.00 0.00 32.93 4.34
1892 1965 4.162320 TGAGTATGTTTCCTCATGACCCTC 59.838 45.833 0.00 0.00 32.93 4.30
1893 1966 4.104086 AGTATGTTTCCTCATGACCCTCA 58.896 43.478 0.00 0.00 0.00 3.86
1894 1967 4.536090 AGTATGTTTCCTCATGACCCTCAA 59.464 41.667 0.00 0.00 0.00 3.02
1895 1968 3.423539 TGTTTCCTCATGACCCTCAAG 57.576 47.619 0.00 0.00 0.00 3.02
1896 1969 2.978978 TGTTTCCTCATGACCCTCAAGA 59.021 45.455 0.00 0.00 0.00 3.02
1897 1970 3.394274 TGTTTCCTCATGACCCTCAAGAA 59.606 43.478 0.00 0.00 0.00 2.52
1898 1971 4.141274 TGTTTCCTCATGACCCTCAAGAAA 60.141 41.667 0.00 0.00 0.00 2.52
1899 1972 3.988976 TCCTCATGACCCTCAAGAAAG 57.011 47.619 0.00 0.00 0.00 2.62
1900 1973 3.251484 TCCTCATGACCCTCAAGAAAGT 58.749 45.455 0.00 0.00 0.00 2.66
1901 1974 3.652869 TCCTCATGACCCTCAAGAAAGTT 59.347 43.478 0.00 0.00 0.00 2.66
1902 1975 4.844085 TCCTCATGACCCTCAAGAAAGTTA 59.156 41.667 0.00 0.00 0.00 2.24
1903 1976 5.046304 TCCTCATGACCCTCAAGAAAGTTAG 60.046 44.000 0.00 0.00 0.00 2.34
1904 1977 5.046304 CCTCATGACCCTCAAGAAAGTTAGA 60.046 44.000 0.00 0.00 0.00 2.10
1905 1978 6.352565 CCTCATGACCCTCAAGAAAGTTAGAT 60.353 42.308 0.00 0.00 0.00 1.98
1906 1979 7.020827 TCATGACCCTCAAGAAAGTTAGATT 57.979 36.000 0.00 0.00 0.00 2.40
1907 1980 7.106239 TCATGACCCTCAAGAAAGTTAGATTC 58.894 38.462 0.00 0.00 0.00 2.52
1908 1981 6.688073 TGACCCTCAAGAAAGTTAGATTCT 57.312 37.500 0.00 0.00 38.75 2.40
1909 1982 7.079451 TGACCCTCAAGAAAGTTAGATTCTT 57.921 36.000 0.00 0.00 45.50 2.52
1910 1983 7.518188 TGACCCTCAAGAAAGTTAGATTCTTT 58.482 34.615 0.00 0.00 42.85 2.52
1911 1984 7.998964 TGACCCTCAAGAAAGTTAGATTCTTTT 59.001 33.333 0.00 0.00 42.85 2.27
1912 1985 8.768501 ACCCTCAAGAAAGTTAGATTCTTTTT 57.231 30.769 0.00 0.00 42.85 1.94
1948 2021 5.940470 TCAAAGAAAGTTAGATTCTGCTCCC 59.060 40.000 0.00 0.00 37.22 4.30
1979 2052 6.712095 TCAGTTTGTCTGTTGATTGATTAGCT 59.288 34.615 0.00 0.00 43.97 3.32
2037 2111 5.172205 GTTCAGTTGCAACCTTAAAACCAA 58.828 37.500 25.62 3.27 0.00 3.67
2278 2354 7.549842 TGATTTCAAACCATTCCATTAATGCTG 59.450 33.333 10.11 6.88 43.18 4.41
2397 2473 1.368641 TTCAATGTCTTCCGCGGATG 58.631 50.000 31.56 30.55 0.00 3.51
2443 2521 1.215423 ACTGGAAGGAAACTGGCAACT 59.785 47.619 0.00 0.00 42.68 3.16
2472 2550 2.361610 CATGCAGTGGTGGGTCCC 60.362 66.667 0.00 0.00 34.77 4.46
2495 2573 4.691860 AATGTTCAAGATGTGCTGTAGC 57.308 40.909 0.00 0.00 42.50 3.58
2566 2649 9.877178 CAGTTATTCAAGACTTCTACCAGTTAT 57.123 33.333 0.00 0.00 0.00 1.89
2659 2761 4.914312 TTTAAGTATTGCACTCGTTCGG 57.086 40.909 0.00 0.00 36.04 4.30
2662 2764 1.076332 GTATTGCACTCGTTCGGCTT 58.924 50.000 0.00 0.00 0.00 4.35
2681 2783 4.978580 GGCTTTTTGTGATTGTTGAGAGAC 59.021 41.667 0.00 0.00 0.00 3.36
2820 2923 1.729881 GCCGATCTTCCATGTTGGC 59.270 57.895 0.00 0.00 37.47 4.52
2930 3033 9.731819 TGAGTATTCACTAAAATCTGTATCGTC 57.268 33.333 0.00 0.00 34.21 4.20
2942 3045 4.421058 TCTGTATCGTCAATCGTCCTTTG 58.579 43.478 0.00 0.00 40.80 2.77
2943 3046 4.157105 TCTGTATCGTCAATCGTCCTTTGA 59.843 41.667 0.00 0.00 40.80 2.69
2986 3089 3.242969 CCAAATGATGCCATCTCTGTTCG 60.243 47.826 6.21 0.00 31.40 3.95
2989 3092 1.216122 GATGCCATCTCTGTTCGAGC 58.784 55.000 0.00 0.00 39.70 5.03
2995 3098 2.069273 CATCTCTGTTCGAGCGGTTTT 58.931 47.619 8.03 0.00 39.70 2.43
3026 3129 1.610522 GCTGGACTCTGTTTGCACAAT 59.389 47.619 0.00 0.00 30.36 2.71
3027 3130 2.035066 GCTGGACTCTGTTTGCACAATT 59.965 45.455 0.00 0.00 30.36 2.32
3066 3375 3.636300 TCAATAAAGATGGAATTGGGGCG 59.364 43.478 0.00 0.00 32.63 6.13
3131 3440 9.855021 AATTACAACAATAGGCTAATTGAACAC 57.145 29.630 18.11 0.00 38.84 3.32
3178 3487 5.394224 CGAAGGAGCTTAGGAATCAGTGTTA 60.394 44.000 0.00 0.00 0.00 2.41
3179 3488 6.374417 AAGGAGCTTAGGAATCAGTGTTAA 57.626 37.500 0.00 0.00 0.00 2.01
3180 3489 5.735766 AGGAGCTTAGGAATCAGTGTTAAC 58.264 41.667 0.00 0.00 0.00 2.01
3237 3546 1.955778 TGGACTCTGTTTGCACAATGG 59.044 47.619 0.00 0.00 30.36 3.16
3271 3580 7.336679 TCTTGATTTCGATAAAATTGGAGCTGA 59.663 33.333 0.00 0.00 37.70 4.26
3285 3595 3.118261 TGGAGCTGAGGCATAGGTTTAAG 60.118 47.826 0.00 0.00 41.70 1.85
3364 3675 3.132925 TCCGTGTTAACTGTAAACTGGC 58.867 45.455 7.22 0.00 0.00 4.85
3367 3678 3.606153 CGTGTTAACTGTAAACTGGCTGC 60.606 47.826 7.22 0.00 0.00 5.25
3374 3685 3.191371 ACTGTAAACTGGCTGCTTATTGC 59.809 43.478 0.00 0.00 43.25 3.56
3556 3868 4.065321 CGAAGGAGCTTATGAATCAGGT 57.935 45.455 0.00 0.00 0.00 4.00
3558 3870 4.509600 CGAAGGAGCTTATGAATCAGGTTC 59.490 45.833 0.00 0.00 37.35 3.62
3627 3941 1.676635 CTGGTCCACAGGTGCATGG 60.677 63.158 0.00 0.00 43.70 3.66
3736 4164 4.188462 CCACCTTTATGTCGAATGTGCTA 58.812 43.478 0.00 0.00 0.00 3.49
3830 4258 4.752101 GCTATCGTTATGTGCTTTCTCCAT 59.248 41.667 0.00 0.00 0.00 3.41
3831 4259 5.333645 GCTATCGTTATGTGCTTTCTCCATG 60.334 44.000 0.00 0.00 0.00 3.66
3869 4302 5.124645 ACCAAACATTTGTTGCATGACAAT 58.875 33.333 4.85 0.00 41.27 2.71
3870 4303 5.589452 ACCAAACATTTGTTGCATGACAATT 59.411 32.000 4.85 0.00 41.27 2.32
3871 4304 6.095160 ACCAAACATTTGTTGCATGACAATTT 59.905 30.769 4.85 1.16 41.27 1.82
3872 4305 6.973474 CCAAACATTTGTTGCATGACAATTTT 59.027 30.769 4.85 3.43 41.27 1.82
3944 4379 1.604604 ACCTCAAACGGGTGTGATTG 58.395 50.000 0.00 0.00 35.51 2.67
4040 4475 1.002792 GGACGGAACAGAAACAGCAAC 60.003 52.381 0.00 0.00 0.00 4.17
4069 4504 5.665812 ACACAGCTTCTTATTCCCCATACTA 59.334 40.000 0.00 0.00 0.00 1.82
4172 4607 0.747255 GGAGTCCTGATCGCAAGCTA 59.253 55.000 0.41 0.00 37.18 3.32
4175 4610 2.034878 AGTCCTGATCGCAAGCTATGA 58.965 47.619 0.00 0.00 37.18 2.15
4203 4638 1.883084 GTTATCGGTGCCTGAGCGG 60.883 63.158 0.00 0.00 45.85 5.52
4277 4713 0.389166 GTTGCCTCGAGTCCTCTGTG 60.389 60.000 12.31 0.00 0.00 3.66
4339 4776 3.244078 TGGCCGTCCTGTATAGCTAATTG 60.244 47.826 0.00 0.00 0.00 2.32
4340 4777 3.006537 GGCCGTCCTGTATAGCTAATTGA 59.993 47.826 0.00 0.00 0.00 2.57
4341 4778 3.988517 GCCGTCCTGTATAGCTAATTGAC 59.011 47.826 0.00 0.17 0.00 3.18
4342 4779 4.262079 GCCGTCCTGTATAGCTAATTGACT 60.262 45.833 0.00 0.00 0.00 3.41
4343 4780 5.048224 GCCGTCCTGTATAGCTAATTGACTA 60.048 44.000 0.00 0.00 0.00 2.59
4344 4781 6.516194 GCCGTCCTGTATAGCTAATTGACTAA 60.516 42.308 0.00 0.00 0.00 2.24
4345 4782 7.603651 CCGTCCTGTATAGCTAATTGACTAAT 58.396 38.462 0.00 0.00 0.00 1.73
4346 4783 8.088981 CCGTCCTGTATAGCTAATTGACTAATT 58.911 37.037 0.00 0.00 39.69 1.40
4370 4810 7.786046 TCCTTCCAGTAAGTAATACAGTTCA 57.214 36.000 0.00 0.00 36.94 3.18
4376 4816 8.598916 TCCAGTAAGTAATACAGTTCATTCCAA 58.401 33.333 0.00 0.00 36.94 3.53
4381 4821 5.642063 AGTAATACAGTTCATTCCAACACCG 59.358 40.000 0.00 0.00 0.00 4.94
4404 6100 5.548406 GAGTTATTTGGTCTGGTGTGTAGT 58.452 41.667 0.00 0.00 0.00 2.73
4435 6386 3.879295 CTGCTGTGTTACCATATCCCTTG 59.121 47.826 0.00 0.00 0.00 3.61
4461 6412 3.992406 TGGATCTGCCAGGGGATC 58.008 61.111 0.00 0.00 43.33 3.36
4510 6486 3.084039 TGGTCATCACAAAGAAGATGCC 58.916 45.455 0.00 0.00 41.02 4.40
4513 6489 3.624861 GTCATCACAAAGAAGATGCCGAT 59.375 43.478 0.00 0.00 41.02 4.18
4517 6493 3.055458 TCACAAAGAAGATGCCGATACCA 60.055 43.478 0.00 0.00 0.00 3.25
4518 6494 3.063997 CACAAAGAAGATGCCGATACCAC 59.936 47.826 0.00 0.00 0.00 4.16
4522 6498 2.146342 GAAGATGCCGATACCACCATG 58.854 52.381 0.00 0.00 0.00 3.66
4530 6506 1.599071 CGATACCACCATGCACACATC 59.401 52.381 0.00 0.00 32.87 3.06
4569 6596 7.706674 TCTACTCCCTCCGTTCCTAAATATAT 58.293 38.462 0.00 0.00 0.00 0.86
4570 6597 8.175431 TCTACTCCCTCCGTTCCTAAATATATT 58.825 37.037 0.00 0.00 0.00 1.28
4571 6598 7.005709 ACTCCCTCCGTTCCTAAATATATTG 57.994 40.000 0.00 0.00 0.00 1.90
4572 6599 6.557633 ACTCCCTCCGTTCCTAAATATATTGT 59.442 38.462 0.00 0.00 0.00 2.71
4573 6600 7.731688 ACTCCCTCCGTTCCTAAATATATTGTA 59.268 37.037 0.00 0.00 0.00 2.41
4574 6601 8.130671 TCCCTCCGTTCCTAAATATATTGTAG 57.869 38.462 0.00 3.80 0.00 2.74
4575 6602 7.951806 TCCCTCCGTTCCTAAATATATTGTAGA 59.048 37.037 0.00 0.00 0.00 2.59
4577 6604 9.021807 CCTCCGTTCCTAAATATATTGTAGAGA 57.978 37.037 0.00 1.95 0.00 3.10
4593 6620 7.437713 TTGTAGAGATTCCACTATGAACCAT 57.562 36.000 0.00 0.00 0.00 3.55
4594 6621 6.820335 TGTAGAGATTCCACTATGAACCATG 58.180 40.000 0.00 0.00 0.00 3.66
4595 6622 5.965033 AGAGATTCCACTATGAACCATGT 57.035 39.130 0.00 0.00 0.00 3.21
4596 6623 7.563556 TGTAGAGATTCCACTATGAACCATGTA 59.436 37.037 0.00 0.00 0.00 2.29
4597 6624 6.821388 AGAGATTCCACTATGAACCATGTAC 58.179 40.000 0.00 0.00 0.00 2.90
4598 6625 5.601662 AGATTCCACTATGAACCATGTACG 58.398 41.667 0.00 0.00 0.00 3.67
4599 6626 3.812156 TCCACTATGAACCATGTACGG 57.188 47.619 0.00 0.00 0.00 4.02
4602 6629 4.058124 CCACTATGAACCATGTACGGATG 58.942 47.826 0.00 0.00 0.00 3.51
4603 6630 4.442893 CCACTATGAACCATGTACGGATGT 60.443 45.833 0.00 0.00 0.00 3.06
4605 6632 6.455647 CACTATGAACCATGTACGGATGTAT 58.544 40.000 0.00 0.00 32.11 2.29
4608 6635 9.470399 ACTATGAACCATGTACGGATGTATATA 57.530 33.333 0.00 0.00 31.44 0.86
4609 6636 9.952188 CTATGAACCATGTACGGATGTATATAG 57.048 37.037 0.00 0.00 31.44 1.31
4614 6641 5.915196 CCATGTACGGATGTATATAGATGCG 59.085 44.000 25.46 25.46 44.23 4.73
4623 6677 9.563898 CGGATGTATATAGATGCGTTTTAAGTA 57.436 33.333 20.95 0.00 36.36 2.24
4645 6699 8.985315 AGTATAGATTCATTCATTTTGCTCCA 57.015 30.769 0.00 0.00 0.00 3.86
4655 6709 6.942532 TTCATTTTGCTCCATATGTAGTCC 57.057 37.500 1.24 0.00 0.00 3.85
4656 6710 6.000246 TCATTTTGCTCCATATGTAGTCCA 58.000 37.500 1.24 0.00 0.00 4.02
4657 6711 5.822519 TCATTTTGCTCCATATGTAGTCCAC 59.177 40.000 1.24 0.00 0.00 4.02
4658 6712 3.838244 TTGCTCCATATGTAGTCCACC 57.162 47.619 1.24 0.00 0.00 4.61
4659 6713 3.046283 TGCTCCATATGTAGTCCACCT 57.954 47.619 1.24 0.00 0.00 4.00
4660 6714 4.193240 TGCTCCATATGTAGTCCACCTA 57.807 45.455 1.24 0.00 0.00 3.08
4663 6717 4.021894 GCTCCATATGTAGTCCACCTAGTG 60.022 50.000 1.24 0.00 0.00 2.74
4682 6736 6.383147 CCTAGTGGAATCCCTACAAAGACTTA 59.617 42.308 0.00 0.00 34.57 2.24
4694 6748 9.257651 CCCTACAAAGACTTATATTTAGGAACG 57.742 37.037 0.00 0.00 0.00 3.95
4719 6773 3.136626 GGGAGTACATGTTCCTTATGCCT 59.863 47.826 14.77 0.00 33.85 4.75
4733 6787 4.398988 CCTTATGCCTTGTACAATGCAAGA 59.601 41.667 32.73 23.61 43.23 3.02
4740 6794 4.409570 CTTGTACAATGCAAGATGCTCAC 58.590 43.478 9.13 0.00 45.31 3.51
4746 6800 0.321346 TGCAAGATGCTCACGGAAGA 59.679 50.000 3.78 0.00 45.31 2.87
4766 6820 9.787532 CGGAAGATGCTTTAAGAAATAAATCAA 57.212 29.630 0.00 0.00 34.35 2.57
4789 6843 7.232534 TCAATTTTTCCATAAGTACCAGTGCTT 59.767 33.333 6.39 6.39 38.94 3.91
4797 6851 8.322828 TCCATAAGTACCAGTGCTTATTTTGTA 58.677 33.333 15.73 1.69 42.94 2.41
4798 6852 8.395633 CCATAAGTACCAGTGCTTATTTTGTAC 58.604 37.037 15.73 0.00 42.94 2.90
4799 6853 6.812879 AAGTACCAGTGCTTATTTTGTACC 57.187 37.500 0.00 0.00 33.77 3.34
4800 6854 5.250982 AGTACCAGTGCTTATTTTGTACCC 58.749 41.667 0.00 0.00 0.00 3.69
4802 6856 3.075432 ACCAGTGCTTATTTTGTACCCCT 59.925 43.478 0.00 0.00 0.00 4.79
4803 6857 3.694566 CCAGTGCTTATTTTGTACCCCTC 59.305 47.826 0.00 0.00 0.00 4.30
4805 6859 2.681344 GTGCTTATTTTGTACCCCTCCG 59.319 50.000 0.00 0.00 0.00 4.63
4809 6863 2.502142 ATTTTGTACCCCTCCGTTCC 57.498 50.000 0.00 0.00 0.00 3.62
4811 6865 1.138568 TTTGTACCCCTCCGTTCCAA 58.861 50.000 0.00 0.00 0.00 3.53
4812 6866 1.138568 TTGTACCCCTCCGTTCCAAA 58.861 50.000 0.00 0.00 0.00 3.28
4813 6867 1.364269 TGTACCCCTCCGTTCCAAAT 58.636 50.000 0.00 0.00 0.00 2.32
4814 6868 1.706305 TGTACCCCTCCGTTCCAAATT 59.294 47.619 0.00 0.00 0.00 1.82
4815 6869 2.911636 TGTACCCCTCCGTTCCAAATTA 59.088 45.455 0.00 0.00 0.00 1.40
4816 6870 2.502142 ACCCCTCCGTTCCAAATTAC 57.498 50.000 0.00 0.00 0.00 1.89
4817 6871 1.990327 ACCCCTCCGTTCCAAATTACT 59.010 47.619 0.00 0.00 0.00 2.24
4818 6872 2.377531 ACCCCTCCGTTCCAAATTACTT 59.622 45.455 0.00 0.00 0.00 2.24
4820 6874 3.418047 CCCTCCGTTCCAAATTACTTGT 58.582 45.455 0.00 0.00 32.65 3.16
4821 6875 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
4822 6876 4.069304 CCTCCGTTCCAAATTACTTGTCA 58.931 43.478 0.00 0.00 32.65 3.58
4823 6877 4.517453 CCTCCGTTCCAAATTACTTGTCAA 59.483 41.667 0.00 0.00 32.65 3.18
4824 6878 5.009210 CCTCCGTTCCAAATTACTTGTCAAA 59.991 40.000 0.00 0.00 32.65 2.69
4825 6879 6.294508 CCTCCGTTCCAAATTACTTGTCAAAT 60.295 38.462 0.00 0.00 32.65 2.32
4827 6881 6.920758 TCCGTTCCAAATTACTTGTCAAATTG 59.079 34.615 0.00 0.00 32.65 2.32
4828 6882 6.920758 CCGTTCCAAATTACTTGTCAAATTGA 59.079 34.615 0.00 0.00 32.65 2.57
4830 6884 8.427012 CGTTCCAAATTACTTGTCAAATTGATG 58.573 33.333 0.00 0.00 32.65 3.07
4831 6885 7.887996 TCCAAATTACTTGTCAAATTGATGC 57.112 32.000 0.00 0.00 32.65 3.91
4832 6886 6.873076 TCCAAATTACTTGTCAAATTGATGCC 59.127 34.615 0.00 0.00 32.65 4.40
4833 6887 6.092533 CCAAATTACTTGTCAAATTGATGCCC 59.907 38.462 0.00 0.00 32.65 5.36
4834 6888 4.799564 TTACTTGTCAAATTGATGCCCC 57.200 40.909 0.00 0.00 0.00 5.80
4835 6889 1.545582 ACTTGTCAAATTGATGCCCCG 59.454 47.619 0.00 0.00 0.00 5.73
4836 6890 1.818060 CTTGTCAAATTGATGCCCCGA 59.182 47.619 0.00 0.00 0.00 5.14
4839 6893 2.830923 TGTCAAATTGATGCCCCGAATT 59.169 40.909 0.00 0.00 0.00 2.17
4841 6895 4.142271 TGTCAAATTGATGCCCCGAATTAC 60.142 41.667 0.00 0.00 0.00 1.89
4842 6896 4.097892 GTCAAATTGATGCCCCGAATTACT 59.902 41.667 0.00 0.00 0.00 2.24
4843 6897 4.709397 TCAAATTGATGCCCCGAATTACTT 59.291 37.500 0.00 0.00 0.00 2.24
4844 6898 4.654091 AATTGATGCCCCGAATTACTTG 57.346 40.909 0.00 0.00 0.00 3.16
4845 6899 2.799126 TGATGCCCCGAATTACTTGT 57.201 45.000 0.00 0.00 0.00 3.16
4847 6901 1.676006 GATGCCCCGAATTACTTGTGG 59.324 52.381 0.00 0.00 0.00 4.17
4848 6902 0.963355 TGCCCCGAATTACTTGTGGC 60.963 55.000 0.00 0.00 37.90 5.01
4849 6903 0.963355 GCCCCGAATTACTTGTGGCA 60.963 55.000 0.00 0.00 37.36 4.92
4851 6905 1.889829 CCCCGAATTACTTGTGGCAAA 59.110 47.619 0.00 0.00 0.00 3.68
4852 6906 2.297597 CCCCGAATTACTTGTGGCAAAA 59.702 45.455 0.00 0.00 0.00 2.44
4854 6908 4.562552 CCCCGAATTACTTGTGGCAAAAAT 60.563 41.667 0.00 0.00 0.00 1.82
4856 6910 4.388469 CCGAATTACTTGTGGCAAAAATGG 59.612 41.667 0.00 0.00 0.00 3.16
4858 6912 5.868801 CGAATTACTTGTGGCAAAAATGGAT 59.131 36.000 0.00 0.00 0.00 3.41
4860 6914 7.706179 CGAATTACTTGTGGCAAAAATGGATAT 59.294 33.333 0.00 0.00 0.00 1.63
4865 6919 8.995027 ACTTGTGGCAAAAATGGATATATCTA 57.005 30.769 12.42 6.97 0.00 1.98
4867 6921 9.288576 CTTGTGGCAAAAATGGATATATCTAGA 57.711 33.333 12.42 0.00 0.00 2.43
4868 6922 8.621532 TGTGGCAAAAATGGATATATCTAGAC 57.378 34.615 12.42 0.00 0.00 2.59
4869 6923 7.387673 TGTGGCAAAAATGGATATATCTAGACG 59.612 37.037 12.42 0.00 0.00 4.18
4871 6925 8.154203 TGGCAAAAATGGATATATCTAGACGAA 58.846 33.333 12.42 0.00 0.00 3.85
4872 6926 8.999431 GGCAAAAATGGATATATCTAGACGAAA 58.001 33.333 12.42 0.00 0.00 3.46
4901 6955 7.573968 AGTTCTAAATACATCCATTTCTGCC 57.426 36.000 0.00 0.00 30.84 4.85
4903 6957 7.284034 AGTTCTAAATACATCCATTTCTGCCTG 59.716 37.037 0.00 0.00 30.84 4.85
4904 6958 4.660789 AAATACATCCATTTCTGCCTGC 57.339 40.909 0.00 0.00 0.00 4.85
4905 6959 1.667236 TACATCCATTTCTGCCTGCG 58.333 50.000 0.00 0.00 0.00 5.18
4906 6960 0.035152 ACATCCATTTCTGCCTGCGA 60.035 50.000 0.00 0.00 0.00 5.10
4911 6965 2.092968 TCCATTTCTGCCTGCGATAAGT 60.093 45.455 0.00 0.00 0.00 2.24
4913 6967 3.876914 CCATTTCTGCCTGCGATAAGTAA 59.123 43.478 0.00 0.00 0.00 2.24
4914 6968 4.516698 CCATTTCTGCCTGCGATAAGTAAT 59.483 41.667 0.00 0.00 0.00 1.89
4916 6970 5.734855 TTTCTGCCTGCGATAAGTAATTC 57.265 39.130 0.00 0.00 0.00 2.17
4918 6972 2.476619 CTGCCTGCGATAAGTAATTCGG 59.523 50.000 0.00 0.00 35.93 4.30
4919 6973 1.798813 GCCTGCGATAAGTAATTCGGG 59.201 52.381 0.00 0.00 35.93 5.14
4920 6974 2.547218 GCCTGCGATAAGTAATTCGGGA 60.547 50.000 0.00 0.00 35.93 5.14
4921 6975 3.057734 CCTGCGATAAGTAATTCGGGAC 58.942 50.000 0.00 0.00 35.93 4.46
4922 6976 3.491964 CCTGCGATAAGTAATTCGGGACA 60.492 47.826 0.00 0.00 35.93 4.02
4923 6977 3.713288 TGCGATAAGTAATTCGGGACAG 58.287 45.455 0.00 0.00 35.93 3.51
4931 6985 0.905357 AATTCGGGACAGAGGGAGTG 59.095 55.000 0.00 0.00 0.00 3.51
4943 7254 3.069586 CAGAGGGAGTGTGTGTTAGAACA 59.930 47.826 0.00 0.00 36.38 3.18
4973 7284 2.242452 GTTCTGGGCCCTTCTCCTATTT 59.758 50.000 25.70 0.00 0.00 1.40
4977 7288 0.535328 GGCCCTTCTCCTATTTCGGC 60.535 60.000 0.00 0.00 0.00 5.54
4978 7289 0.470341 GCCCTTCTCCTATTTCGGCT 59.530 55.000 0.00 0.00 32.09 5.52
4979 7290 1.134068 GCCCTTCTCCTATTTCGGCTT 60.134 52.381 0.00 0.00 32.09 4.35
4980 7291 2.684038 GCCCTTCTCCTATTTCGGCTTT 60.684 50.000 0.00 0.00 32.09 3.51
4982 7293 3.628032 CCCTTCTCCTATTTCGGCTTTTC 59.372 47.826 0.00 0.00 0.00 2.29
4983 7294 3.628032 CCTTCTCCTATTTCGGCTTTTCC 59.372 47.826 0.00 0.00 0.00 3.13
5003 7315 8.725405 TTTTCCCCTGTTCAAAAGAAAAATAC 57.275 30.769 0.00 0.00 32.09 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 61 8.218488 GGAAAGGATATTTGTATGAAGTAGGGT 58.782 37.037 0.00 0.00 0.00 4.34
50 62 8.217799 TGGAAAGGATATTTGTATGAAGTAGGG 58.782 37.037 0.00 0.00 0.00 3.53
70 83 8.960591 AGGTTGACATGTTATTTCTATGGAAAG 58.039 33.333 10.20 0.00 43.52 2.62
160 175 7.801104 TGAATCTTGCATGTATTAGAACCCTA 58.199 34.615 0.00 0.00 0.00 3.53
259 291 2.487625 CCTAGAAGGTACTCTCCTCCGG 60.488 59.091 0.00 0.00 38.49 5.14
320 352 1.855599 CCCCTCTCCCAAATCCTTCAT 59.144 52.381 0.00 0.00 0.00 2.57
367 400 2.372040 TTACAGAACAGTGGCGCCGT 62.372 55.000 23.90 11.27 0.00 5.68
375 409 3.709653 TGTTCCAGGAGTTACAGAACAGT 59.290 43.478 0.00 0.00 41.25 3.55
430 471 3.452264 TGCACTATGACTTAGATGCCAGT 59.548 43.478 14.49 0.00 35.68 4.00
446 488 2.900273 CCCTTAGGCGCTGCACTA 59.100 61.111 7.64 0.00 0.00 2.74
490 540 3.518998 GCGTCTCCGAGCTAGGCA 61.519 66.667 8.21 0.00 35.63 4.75
504 554 4.569180 ACCCAAGCAGTGCAGCGT 62.569 61.111 19.20 4.96 40.15 5.07
532 583 3.320879 CTGTCCATCGTGGCAGCCT 62.321 63.158 14.15 0.00 37.47 4.58
543 594 2.260869 GCGTTGCACACCTGTCCAT 61.261 57.895 0.00 0.00 0.00 3.41
607 658 0.589223 TAACCTTTTTGAGTGGCGCG 59.411 50.000 0.00 0.00 0.00 6.86
707 759 4.760047 AGCCGCCACTGCCGTTAG 62.760 66.667 0.00 0.00 0.00 2.34
708 760 4.752879 GAGCCGCCACTGCCGTTA 62.753 66.667 0.00 0.00 0.00 3.18
714 766 2.826777 AATTCCTGGAGCCGCCACTG 62.827 60.000 0.00 0.00 43.33 3.66
715 767 2.142292 AAATTCCTGGAGCCGCCACT 62.142 55.000 0.00 0.00 43.33 4.00
716 768 1.678970 AAATTCCTGGAGCCGCCAC 60.679 57.895 0.00 0.00 43.33 5.01
717 769 1.678635 CAAATTCCTGGAGCCGCCA 60.679 57.895 0.00 0.00 46.96 5.69
718 770 3.068729 GCAAATTCCTGGAGCCGCC 62.069 63.158 0.00 0.00 37.10 6.13
719 771 1.876497 TTGCAAATTCCTGGAGCCGC 61.876 55.000 0.00 0.00 0.00 6.53
720 772 0.109132 GTTGCAAATTCCTGGAGCCG 60.109 55.000 0.00 0.00 0.00 5.52
721 773 0.247460 GGTTGCAAATTCCTGGAGCC 59.753 55.000 0.00 0.00 31.24 4.70
722 774 0.109132 CGGTTGCAAATTCCTGGAGC 60.109 55.000 0.00 0.00 0.00 4.70
723 775 0.527565 CCGGTTGCAAATTCCTGGAG 59.472 55.000 0.00 0.00 0.00 3.86
724 776 0.111446 TCCGGTTGCAAATTCCTGGA 59.889 50.000 10.50 10.50 0.00 3.86
725 777 1.185315 ATCCGGTTGCAAATTCCTGG 58.815 50.000 0.00 3.17 0.00 4.45
726 778 4.097741 TGAATATCCGGTTGCAAATTCCTG 59.902 41.667 13.88 3.89 0.00 3.86
727 779 4.277476 TGAATATCCGGTTGCAAATTCCT 58.723 39.130 13.88 0.00 0.00 3.36
728 780 4.647424 TGAATATCCGGTTGCAAATTCC 57.353 40.909 13.88 5.82 0.00 3.01
729 781 5.916883 CAGATGAATATCCGGTTGCAAATTC 59.083 40.000 0.00 6.52 33.64 2.17
730 782 5.360714 ACAGATGAATATCCGGTTGCAAATT 59.639 36.000 0.00 0.00 33.64 1.82
731 783 4.889409 ACAGATGAATATCCGGTTGCAAAT 59.111 37.500 0.00 0.00 33.64 2.32
732 784 4.269183 ACAGATGAATATCCGGTTGCAAA 58.731 39.130 0.00 0.00 33.64 3.68
733 785 3.884895 ACAGATGAATATCCGGTTGCAA 58.115 40.909 0.00 0.00 33.64 4.08
734 786 3.558931 ACAGATGAATATCCGGTTGCA 57.441 42.857 0.00 0.00 33.64 4.08
735 787 5.700832 TGAATACAGATGAATATCCGGTTGC 59.299 40.000 0.00 0.00 33.64 4.17
736 788 7.912056 ATGAATACAGATGAATATCCGGTTG 57.088 36.000 0.00 0.00 33.64 3.77
737 789 8.924511 AAATGAATACAGATGAATATCCGGTT 57.075 30.769 0.00 0.00 33.64 4.44
738 790 8.786898 CAAAATGAATACAGATGAATATCCGGT 58.213 33.333 0.00 0.00 33.64 5.28
739 791 7.752239 GCAAAATGAATACAGATGAATATCCGG 59.248 37.037 0.00 0.00 33.64 5.14
740 792 7.752239 GGCAAAATGAATACAGATGAATATCCG 59.248 37.037 0.00 0.00 33.64 4.18
741 793 8.579006 TGGCAAAATGAATACAGATGAATATCC 58.421 33.333 0.00 0.00 33.64 2.59
742 794 9.970395 TTGGCAAAATGAATACAGATGAATATC 57.030 29.630 0.00 0.00 0.00 1.63
745 797 9.675464 ATTTTGGCAAAATGAATACAGATGAAT 57.325 25.926 31.36 7.77 39.50 2.57
746 798 9.153721 GATTTTGGCAAAATGAATACAGATGAA 57.846 29.630 35.49 7.53 40.97 2.57
747 799 8.312564 TGATTTTGGCAAAATGAATACAGATGA 58.687 29.630 35.49 8.16 40.97 2.92
748 800 8.481974 TGATTTTGGCAAAATGAATACAGATG 57.518 30.769 35.49 0.00 40.97 2.90
749 801 9.675464 AATGATTTTGGCAAAATGAATACAGAT 57.325 25.926 35.49 19.03 40.97 2.90
750 802 8.937884 CAATGATTTTGGCAAAATGAATACAGA 58.062 29.630 35.49 9.30 40.97 3.41
751 803 8.723311 ACAATGATTTTGGCAAAATGAATACAG 58.277 29.630 35.49 22.76 40.97 2.74
752 804 8.618702 ACAATGATTTTGGCAAAATGAATACA 57.381 26.923 35.49 26.89 40.97 2.29
753 805 9.332301 CAACAATGATTTTGGCAAAATGAATAC 57.668 29.630 35.49 23.04 40.97 1.89
754 806 9.064706 ACAACAATGATTTTGGCAAAATGAATA 57.935 25.926 35.49 21.22 40.97 1.75
755 807 7.942990 ACAACAATGATTTTGGCAAAATGAAT 58.057 26.923 35.49 25.87 40.97 2.57
756 808 7.330900 ACAACAATGATTTTGGCAAAATGAA 57.669 28.000 35.49 25.01 40.97 2.57
757 809 6.939132 ACAACAATGATTTTGGCAAAATGA 57.061 29.167 35.49 29.60 40.97 2.57
758 810 7.988904 AAACAACAATGATTTTGGCAAAATG 57.011 28.000 35.49 26.16 40.97 2.32
759 811 8.999220 AAAAACAACAATGATTTTGGCAAAAT 57.001 23.077 32.12 32.12 43.43 1.82
760 812 8.084073 TGAAAAACAACAATGATTTTGGCAAAA 58.916 25.926 25.94 25.94 40.36 2.44
761 813 7.596494 TGAAAAACAACAATGATTTTGGCAAA 58.404 26.923 8.93 8.93 40.36 3.68
762 814 7.149569 TGAAAAACAACAATGATTTTGGCAA 57.850 28.000 0.00 0.00 40.36 4.52
763 815 6.748333 TGAAAAACAACAATGATTTTGGCA 57.252 29.167 2.20 0.00 40.36 4.92
764 816 8.458212 TTTTGAAAAACAACAATGATTTTGGC 57.542 26.923 2.20 0.00 40.36 4.52
790 842 9.868277 TGTTGATTTTGACAAAAGAGTTACAAT 57.132 25.926 17.73 0.00 33.22 2.71
791 843 9.134734 GTGTTGATTTTGACAAAAGAGTTACAA 57.865 29.630 17.73 12.84 33.22 2.41
792 844 8.519526 AGTGTTGATTTTGACAAAAGAGTTACA 58.480 29.630 17.73 13.38 33.22 2.41
793 845 8.798153 CAGTGTTGATTTTGACAAAAGAGTTAC 58.202 33.333 17.73 13.24 33.22 2.50
794 846 8.519526 ACAGTGTTGATTTTGACAAAAGAGTTA 58.480 29.630 17.73 3.26 33.22 2.24
795 847 7.378181 ACAGTGTTGATTTTGACAAAAGAGTT 58.622 30.769 17.73 2.15 33.22 3.01
796 848 6.924111 ACAGTGTTGATTTTGACAAAAGAGT 58.076 32.000 17.73 2.50 33.22 3.24
797 849 7.816945 AACAGTGTTGATTTTGACAAAAGAG 57.183 32.000 17.73 5.18 33.22 2.85
798 850 8.494347 CAAAACAGTGTTGATTTTGACAAAAGA 58.506 29.630 17.73 5.46 43.07 2.52
799 851 8.281893 ACAAAACAGTGTTGATTTTGACAAAAG 58.718 29.630 19.92 5.36 43.07 2.27
800 852 8.147642 ACAAAACAGTGTTGATTTTGACAAAA 57.852 26.923 19.92 15.39 43.07 2.44
801 853 7.721286 ACAAAACAGTGTTGATTTTGACAAA 57.279 28.000 19.92 0.00 43.07 2.83
802 854 8.818141 TTACAAAACAGTGTTGATTTTGACAA 57.182 26.923 19.92 12.37 43.07 3.18
803 855 8.818141 TTTACAAAACAGTGTTGATTTTGACA 57.182 26.923 19.92 8.36 43.07 3.58
809 861 8.591312 CGTGATTTTTACAAAACAGTGTTGATT 58.409 29.630 9.79 0.00 32.75 2.57
810 862 7.221838 CCGTGATTTTTACAAAACAGTGTTGAT 59.778 33.333 9.79 0.00 32.75 2.57
811 863 6.528423 CCGTGATTTTTACAAAACAGTGTTGA 59.472 34.615 9.79 0.00 32.75 3.18
812 864 6.237701 CCCGTGATTTTTACAAAACAGTGTTG 60.238 38.462 9.79 1.46 32.75 3.33
813 865 5.808030 CCCGTGATTTTTACAAAACAGTGTT 59.192 36.000 1.64 1.64 32.75 3.32
814 866 5.105675 ACCCGTGATTTTTACAAAACAGTGT 60.106 36.000 0.00 0.00 35.43 3.55
815 867 5.231147 CACCCGTGATTTTTACAAAACAGTG 59.769 40.000 0.00 0.00 0.00 3.66
816 868 5.105675 ACACCCGTGATTTTTACAAAACAGT 60.106 36.000 0.96 0.00 0.00 3.55
817 869 5.344884 ACACCCGTGATTTTTACAAAACAG 58.655 37.500 0.96 0.00 0.00 3.16
818 870 5.326200 ACACCCGTGATTTTTACAAAACA 57.674 34.783 0.96 0.00 0.00 2.83
819 871 5.805994 TGAACACCCGTGATTTTTACAAAAC 59.194 36.000 0.96 0.00 0.00 2.43
820 872 5.805994 GTGAACACCCGTGATTTTTACAAAA 59.194 36.000 0.96 0.00 0.00 2.44
821 873 5.105877 TGTGAACACCCGTGATTTTTACAAA 60.106 36.000 0.96 0.00 0.00 2.83
822 874 4.398358 TGTGAACACCCGTGATTTTTACAA 59.602 37.500 0.96 0.00 0.00 2.41
823 875 3.945921 TGTGAACACCCGTGATTTTTACA 59.054 39.130 0.96 0.00 0.00 2.41
824 876 4.555348 TGTGAACACCCGTGATTTTTAC 57.445 40.909 0.96 0.00 0.00 2.01
825 877 4.822350 TCATGTGAACACCCGTGATTTTTA 59.178 37.500 0.96 0.00 0.00 1.52
826 878 3.634448 TCATGTGAACACCCGTGATTTTT 59.366 39.130 0.96 0.00 0.00 1.94
827 879 3.218453 TCATGTGAACACCCGTGATTTT 58.782 40.909 0.96 0.00 0.00 1.82
828 880 2.857483 TCATGTGAACACCCGTGATTT 58.143 42.857 0.96 0.00 0.00 2.17
829 881 2.559698 TCATGTGAACACCCGTGATT 57.440 45.000 0.96 0.00 0.00 2.57
830 882 2.038426 TCTTCATGTGAACACCCGTGAT 59.962 45.455 0.96 0.00 0.00 3.06
831 883 1.414550 TCTTCATGTGAACACCCGTGA 59.585 47.619 0.96 2.44 0.00 4.35
832 884 1.531149 GTCTTCATGTGAACACCCGTG 59.469 52.381 2.46 0.00 0.00 4.94
833 885 1.542547 GGTCTTCATGTGAACACCCGT 60.543 52.381 8.49 0.00 37.20 5.28
834 886 1.156736 GGTCTTCATGTGAACACCCG 58.843 55.000 8.49 0.00 37.20 5.28
835 887 1.156736 CGGTCTTCATGTGAACACCC 58.843 55.000 12.61 3.60 39.13 4.61
836 888 2.163818 TCGGTCTTCATGTGAACACC 57.836 50.000 9.37 9.37 39.00 4.16
837 889 3.390135 TCTTCGGTCTTCATGTGAACAC 58.610 45.455 7.15 0.00 0.00 3.32
838 890 3.744238 TCTTCGGTCTTCATGTGAACA 57.256 42.857 7.15 0.00 0.00 3.18
839 891 5.063564 GGTATTCTTCGGTCTTCATGTGAAC 59.936 44.000 0.00 0.00 0.00 3.18
840 892 5.175859 GGTATTCTTCGGTCTTCATGTGAA 58.824 41.667 0.00 0.00 0.00 3.18
841 893 4.382685 GGGTATTCTTCGGTCTTCATGTGA 60.383 45.833 0.00 0.00 0.00 3.58
842 894 3.871594 GGGTATTCTTCGGTCTTCATGTG 59.128 47.826 0.00 0.00 0.00 3.21
843 895 3.118371 GGGGTATTCTTCGGTCTTCATGT 60.118 47.826 0.00 0.00 0.00 3.21
844 896 3.134804 AGGGGTATTCTTCGGTCTTCATG 59.865 47.826 0.00 0.00 0.00 3.07
845 897 3.385115 AGGGGTATTCTTCGGTCTTCAT 58.615 45.455 0.00 0.00 0.00 2.57
846 898 2.829023 AGGGGTATTCTTCGGTCTTCA 58.171 47.619 0.00 0.00 0.00 3.02
847 899 3.243805 GCTAGGGGTATTCTTCGGTCTTC 60.244 52.174 0.00 0.00 0.00 2.87
848 900 2.699321 GCTAGGGGTATTCTTCGGTCTT 59.301 50.000 0.00 0.00 0.00 3.01
849 901 2.317973 GCTAGGGGTATTCTTCGGTCT 58.682 52.381 0.00 0.00 0.00 3.85
850 902 2.037144 TGCTAGGGGTATTCTTCGGTC 58.963 52.381 0.00 0.00 0.00 4.79
851 903 1.761198 GTGCTAGGGGTATTCTTCGGT 59.239 52.381 0.00 0.00 0.00 4.69
852 904 1.269621 CGTGCTAGGGGTATTCTTCGG 60.270 57.143 0.00 0.00 0.00 4.30
853 905 1.269621 CCGTGCTAGGGGTATTCTTCG 60.270 57.143 0.00 0.00 0.00 3.79
854 906 1.540580 GCCGTGCTAGGGGTATTCTTC 60.541 57.143 0.00 0.00 0.00 2.87
855 907 0.468648 GCCGTGCTAGGGGTATTCTT 59.531 55.000 0.00 0.00 0.00 2.52
856 908 1.408453 GGCCGTGCTAGGGGTATTCT 61.408 60.000 0.00 0.00 0.00 2.40
857 909 1.070957 GGCCGTGCTAGGGGTATTC 59.929 63.158 0.00 0.00 0.00 1.75
858 910 2.449450 GGGCCGTGCTAGGGGTATT 61.449 63.158 0.00 0.00 0.00 1.89
859 911 2.847715 GGGCCGTGCTAGGGGTAT 60.848 66.667 0.00 0.00 0.00 2.73
880 932 2.837031 ATTGCCACCCTGCCGTTAGG 62.837 60.000 0.00 0.00 41.62 2.69
881 933 0.107410 TATTGCCACCCTGCCGTTAG 60.107 55.000 0.00 0.00 0.00 2.34
882 934 0.393267 GTATTGCCACCCTGCCGTTA 60.393 55.000 0.00 0.00 0.00 3.18
883 935 1.677633 GTATTGCCACCCTGCCGTT 60.678 57.895 0.00 0.00 0.00 4.44
884 936 2.045340 GTATTGCCACCCTGCCGT 60.045 61.111 0.00 0.00 0.00 5.68
885 937 2.045438 TGTATTGCCACCCTGCCG 60.045 61.111 0.00 0.00 0.00 5.69
886 938 0.684153 ATGTGTATTGCCACCCTGCC 60.684 55.000 0.00 0.00 34.35 4.85
887 939 0.457035 CATGTGTATTGCCACCCTGC 59.543 55.000 0.00 0.00 34.35 4.85
888 940 1.105457 CCATGTGTATTGCCACCCTG 58.895 55.000 0.00 0.00 34.35 4.45
889 941 0.684153 GCCATGTGTATTGCCACCCT 60.684 55.000 0.00 0.00 34.35 4.34
904 956 1.909459 TACAGCCGACATGGTGCCAT 61.909 55.000 0.00 0.00 41.21 4.40
911 963 1.522355 CCTGCCTACAGCCGACATG 60.522 63.158 0.00 0.00 43.02 3.21
916 968 1.153549 GTCTTCCTGCCTACAGCCG 60.154 63.158 0.00 0.00 43.02 5.52
919 971 3.450028 GCTGTCTTCCTGCCTACAG 57.550 57.895 0.00 0.00 44.05 2.74
985 1037 3.857052 CAGTCATTTTCTAGCCACCGTA 58.143 45.455 0.00 0.00 0.00 4.02
1033 1085 2.190488 AAAAGGAGGAGAGCGCCTGG 62.190 60.000 2.29 0.00 38.73 4.45
1034 1086 0.742635 GAAAAGGAGGAGAGCGCCTG 60.743 60.000 2.29 0.00 38.73 4.85
1035 1087 1.599576 GAAAAGGAGGAGAGCGCCT 59.400 57.895 2.29 0.00 42.17 5.52
1036 1088 1.450491 GGAAAAGGAGGAGAGCGCC 60.450 63.158 2.29 0.00 0.00 6.53
1037 1089 1.450491 GGGAAAAGGAGGAGAGCGC 60.450 63.158 0.00 0.00 0.00 5.92
1038 1090 1.222113 GGGGAAAAGGAGGAGAGCG 59.778 63.158 0.00 0.00 0.00 5.03
1039 1091 0.916845 AGGGGGAAAAGGAGGAGAGC 60.917 60.000 0.00 0.00 0.00 4.09
1040 1092 1.208706 GAGGGGGAAAAGGAGGAGAG 58.791 60.000 0.00 0.00 0.00 3.20
1041 1093 0.496382 TGAGGGGGAAAAGGAGGAGA 59.504 55.000 0.00 0.00 0.00 3.71
1042 1094 0.621082 GTGAGGGGGAAAAGGAGGAG 59.379 60.000 0.00 0.00 0.00 3.69
1043 1095 0.196118 AGTGAGGGGGAAAAGGAGGA 59.804 55.000 0.00 0.00 0.00 3.71
1148 1207 0.108138 GTCGTTGGAGGAGGACATGG 60.108 60.000 0.00 0.00 35.20 3.66
1155 1214 4.452733 GGGGCGTCGTTGGAGGAG 62.453 72.222 0.00 0.00 0.00 3.69
1216 1275 2.749621 CGAAATTGAGGGAGGAACTTGG 59.250 50.000 0.00 0.00 41.55 3.61
1220 1279 2.488153 CAACCGAAATTGAGGGAGGAAC 59.512 50.000 4.71 0.00 0.00 3.62
1612 1671 0.178767 CAGATGCCCGGAACAGATGA 59.821 55.000 0.73 0.00 0.00 2.92
1647 1706 2.017049 GGACGACAATGAGATTTGGGG 58.983 52.381 0.00 0.00 0.00 4.96
1724 1784 1.880819 TTTGAGACGGGGCGAGTACC 61.881 60.000 0.00 0.00 0.00 3.34
1731 1791 2.418976 GACACTTATTTTGAGACGGGGC 59.581 50.000 0.00 0.00 0.00 5.80
1732 1792 3.933332 GAGACACTTATTTTGAGACGGGG 59.067 47.826 0.00 0.00 0.00 5.73
1733 1793 4.566004 TGAGACACTTATTTTGAGACGGG 58.434 43.478 0.00 0.00 0.00 5.28
1736 1796 6.793492 AAGCTGAGACACTTATTTTGAGAC 57.207 37.500 0.00 0.00 0.00 3.36
1739 1799 9.944376 AGTATAAAGCTGAGACACTTATTTTGA 57.056 29.630 0.00 0.00 0.00 2.69
1747 1807 7.948034 AGAGTTAGTATAAAGCTGAGACACT 57.052 36.000 0.00 0.00 0.00 3.55
1748 1808 8.895737 ACTAGAGTTAGTATAAAGCTGAGACAC 58.104 37.037 0.00 0.00 38.35 3.67
1784 1844 9.802039 ACCAAAATAAGTGTCTCAACCTTAATA 57.198 29.630 0.00 0.00 0.00 0.98
1785 1845 8.706322 ACCAAAATAAGTGTCTCAACCTTAAT 57.294 30.769 0.00 0.00 0.00 1.40
1789 1849 6.710744 CAGTACCAAAATAAGTGTCTCAACCT 59.289 38.462 0.00 0.00 0.00 3.50
1790 1850 6.708949 TCAGTACCAAAATAAGTGTCTCAACC 59.291 38.462 0.00 0.00 0.00 3.77
1791 1851 7.095187 CCTCAGTACCAAAATAAGTGTCTCAAC 60.095 40.741 0.00 0.00 0.00 3.18
1792 1852 6.934645 CCTCAGTACCAAAATAAGTGTCTCAA 59.065 38.462 0.00 0.00 0.00 3.02
1795 1865 6.183361 ACACCTCAGTACCAAAATAAGTGTCT 60.183 38.462 0.00 0.00 29.21 3.41
1800 1870 8.561738 ACATAACACCTCAGTACCAAAATAAG 57.438 34.615 0.00 0.00 0.00 1.73
1801 1871 8.927675 AACATAACACCTCAGTACCAAAATAA 57.072 30.769 0.00 0.00 0.00 1.40
1804 1874 7.012894 CAGAAACATAACACCTCAGTACCAAAA 59.987 37.037 0.00 0.00 0.00 2.44
1807 1877 5.305902 TCAGAAACATAACACCTCAGTACCA 59.694 40.000 0.00 0.00 0.00 3.25
1810 1880 7.178451 TCAGATCAGAAACATAACACCTCAGTA 59.822 37.037 0.00 0.00 0.00 2.74
1813 1883 6.014242 ACTCAGATCAGAAACATAACACCTCA 60.014 38.462 0.00 0.00 0.00 3.86
1818 1888 5.863935 CGACACTCAGATCAGAAACATAACA 59.136 40.000 0.00 0.00 0.00 2.41
1819 1889 5.864474 ACGACACTCAGATCAGAAACATAAC 59.136 40.000 0.00 0.00 0.00 1.89
1820 1890 5.863935 CACGACACTCAGATCAGAAACATAA 59.136 40.000 0.00 0.00 0.00 1.90
1915 1988 8.696410 AATCTAACTTTCTTTGAACGCAAAAA 57.304 26.923 0.00 0.00 42.96 1.94
1916 1989 8.188139 AGAATCTAACTTTCTTTGAACGCAAAA 58.812 29.630 0.00 0.00 42.96 2.44
1917 1990 7.643764 CAGAATCTAACTTTCTTTGAACGCAAA 59.356 33.333 0.00 0.00 41.47 3.68
1918 1991 7.132213 CAGAATCTAACTTTCTTTGAACGCAA 58.868 34.615 0.00 0.00 31.11 4.85
1919 1992 6.658831 CAGAATCTAACTTTCTTTGAACGCA 58.341 36.000 0.00 0.00 31.11 5.24
1920 1993 5.565638 GCAGAATCTAACTTTCTTTGAACGC 59.434 40.000 0.00 0.00 31.11 4.84
1921 1994 6.892691 AGCAGAATCTAACTTTCTTTGAACG 58.107 36.000 0.00 0.00 31.11 3.95
1922 1995 7.301789 GGAGCAGAATCTAACTTTCTTTGAAC 58.698 38.462 0.00 0.00 31.11 3.18
1923 1996 6.431234 GGGAGCAGAATCTAACTTTCTTTGAA 59.569 38.462 0.00 0.00 31.11 2.69
1927 2000 5.770685 AGGGAGCAGAATCTAACTTTCTT 57.229 39.130 0.00 0.00 31.11 2.52
1929 2002 6.587273 ACATAGGGAGCAGAATCTAACTTTC 58.413 40.000 0.00 0.00 0.00 2.62
1979 2052 4.657814 AGAGGGCTCAAATCAACCTTTA 57.342 40.909 0.00 0.00 0.00 1.85
2037 2111 3.897239 TGGACCAAGTCAACTTTGTGAT 58.103 40.909 4.51 0.00 32.77 3.06
2136 2211 7.867403 ACACCATATCTTTTGTTGTGAAATGAC 59.133 33.333 0.00 0.00 0.00 3.06
2278 2354 3.674997 TGAAGTGCCTGGTTTGAGATAC 58.325 45.455 0.00 0.00 0.00 2.24
2375 2451 1.737236 TCCGCGGAAGACATTGAAATG 59.263 47.619 28.99 1.45 42.10 2.32
2390 2466 0.102300 TGTCCATAGTGACATCCGCG 59.898 55.000 0.00 0.00 40.22 6.46
2443 2521 3.575506 CTGCATGGGCTGTAAAGGA 57.424 52.632 0.00 0.00 41.91 3.36
2472 2550 4.855388 GCTACAGCACATCTTGAACATTTG 59.145 41.667 0.00 0.00 41.59 2.32
2566 2649 4.496360 CATGTGTATTTGCAAATCAGGCA 58.504 39.130 27.28 20.32 40.00 4.75
2645 2746 0.951558 AAAAGCCGAACGAGTGCAAT 59.048 45.000 0.00 0.00 0.00 3.56
2659 2761 5.825507 AGTCTCTCAACAATCACAAAAAGC 58.174 37.500 0.00 0.00 0.00 3.51
2662 2764 7.572523 ATCAAGTCTCTCAACAATCACAAAA 57.427 32.000 0.00 0.00 0.00 2.44
2681 2783 5.366460 ACATGAGCTTCCTGATGTATCAAG 58.634 41.667 0.00 0.00 42.88 3.02
2729 2831 6.044046 GCAAAACATGATGAATGCAGGAATA 58.956 36.000 0.00 0.00 40.22 1.75
2730 2832 4.873827 GCAAAACATGATGAATGCAGGAAT 59.126 37.500 0.00 0.00 40.22 3.01
2930 3033 4.093556 GGCTAAGACTTCAAAGGACGATTG 59.906 45.833 0.00 0.00 0.00 2.67
2942 3045 4.237724 GCAATTTTGGTGGCTAAGACTTC 58.762 43.478 0.00 0.00 0.00 3.01
2943 3046 3.006859 GGCAATTTTGGTGGCTAAGACTT 59.993 43.478 0.00 0.00 38.46 3.01
2986 3089 4.795278 CAGCATTCAGAATTAAAACCGCTC 59.205 41.667 0.00 0.00 0.00 5.03
2989 3092 5.095490 GTCCAGCATTCAGAATTAAAACCG 58.905 41.667 0.00 0.00 0.00 4.44
2995 3098 5.426689 ACAGAGTCCAGCATTCAGAATTA 57.573 39.130 0.00 0.00 0.00 1.40
3052 3361 0.182775 ACCTACGCCCCAATTCCATC 59.817 55.000 0.00 0.00 0.00 3.51
3058 3367 2.028876 GCATTAAACCTACGCCCCAAT 58.971 47.619 0.00 0.00 0.00 3.16
3059 3368 1.465794 GCATTAAACCTACGCCCCAA 58.534 50.000 0.00 0.00 0.00 4.12
3066 3375 7.812648 TGATTTATATGGCGCATTAAACCTAC 58.187 34.615 10.83 0.00 0.00 3.18
3131 3440 4.566360 GGCCATAACATTTCCAAAATCACG 59.434 41.667 0.00 0.00 0.00 4.35
3203 3512 4.284490 ACAGAGTCCAGCATTCAGAGTTTA 59.716 41.667 0.00 0.00 0.00 2.01
3207 3516 3.331478 AACAGAGTCCAGCATTCAGAG 57.669 47.619 0.00 0.00 0.00 3.35
3211 3520 1.881973 TGCAAACAGAGTCCAGCATTC 59.118 47.619 0.00 0.00 0.00 2.67
3271 3580 0.465642 GGCGCCTTAAACCTATGCCT 60.466 55.000 22.15 0.00 38.00 4.75
3285 3595 5.175673 GCATTTTATTTAGATTCTTGGCGCC 59.824 40.000 22.73 22.73 0.00 6.53
3318 3629 0.912486 AAGCTCCTTCGGCCTATTGT 59.088 50.000 0.00 0.00 0.00 2.71
3339 3650 4.090930 CAGTTTACAGTTAACACGGATCCG 59.909 45.833 32.20 32.20 46.03 4.18
3341 3652 4.142966 GCCAGTTTACAGTTAACACGGATC 60.143 45.833 8.61 0.00 0.00 3.36
3346 3657 3.564225 AGCAGCCAGTTTACAGTTAACAC 59.436 43.478 8.61 0.00 0.00 3.32
3351 3662 4.321230 GCAATAAGCAGCCAGTTTACAGTT 60.321 41.667 0.00 0.00 44.79 3.16
3367 3678 8.192774 TCCAGCATTCAGAATTTAAGCAATAAG 58.807 33.333 6.09 0.00 0.00 1.73
3374 3685 6.373774 ACAGAGTCCAGCATTCAGAATTTAAG 59.626 38.462 0.00 0.00 0.00 1.85
3435 3746 1.639635 AACCTATGCCCCAGCTCCAG 61.640 60.000 0.00 0.00 40.80 3.86
3555 3867 4.976224 ACCAACCAGTTTACAGTTGAAC 57.024 40.909 13.93 0.00 42.76 3.18
3556 3868 7.339721 TCAATAACCAACCAGTTTACAGTTGAA 59.660 33.333 13.93 4.05 42.76 2.69
3558 3870 7.033530 TCAATAACCAACCAGTTTACAGTTG 57.966 36.000 8.15 8.15 40.42 3.16
3627 3941 5.563475 GCAGATACCACATTATCACCATTGC 60.563 44.000 0.00 0.00 31.72 3.56
3736 4164 5.481473 AGAACCAGATATGGCAAAAACACAT 59.519 36.000 6.21 0.00 0.00 3.21
3788 4216 1.930371 GCCCGCAAATGTGACAGAAAC 60.930 52.381 0.00 0.00 0.00 2.78
3830 4258 2.646175 GGTCCAGCCAGCGACTACA 61.646 63.158 0.00 0.00 37.17 2.74
3831 4259 2.184579 GGTCCAGCCAGCGACTAC 59.815 66.667 0.00 0.00 37.17 2.73
3913 4348 1.266989 GTTTGAGGTACCAGCTTGCAC 59.733 52.381 15.94 0.00 0.00 4.57
3944 4379 8.523658 AGCAAATGGATAGAAAAGTTAAAGGTC 58.476 33.333 0.00 0.00 0.00 3.85
4040 4475 3.621715 GGGAATAAGAAGCTGTGTTACCG 59.378 47.826 0.00 0.00 0.00 4.02
4069 4504 0.322816 TCGCCCTCTACCGTGTTACT 60.323 55.000 0.00 0.00 0.00 2.24
4107 4542 2.282674 CTGCACCACCACTGCCAT 60.283 61.111 0.00 0.00 33.36 4.40
4172 4607 3.817084 CACCGATAACATGGCAGAATCAT 59.183 43.478 0.00 0.00 0.00 2.45
4175 4610 1.949525 GCACCGATAACATGGCAGAAT 59.050 47.619 0.00 0.00 0.00 2.40
4203 4638 2.886124 GCTTCGCCCTCTGTACGC 60.886 66.667 0.00 0.00 0.00 4.42
4209 4644 4.067896 CAATATAATGTGCTTCGCCCTCT 58.932 43.478 0.00 0.00 0.00 3.69
4223 4658 7.292713 TGCAAGCCACATTGATCAATATAAT 57.707 32.000 20.32 4.47 31.55 1.28
4228 4663 3.792401 CATGCAAGCCACATTGATCAAT 58.208 40.909 15.36 15.36 31.55 2.57
4277 4713 9.961265 AAACAAAACACTCTTAAGCCTTAATAC 57.039 29.630 0.00 0.00 0.00 1.89
4343 4780 9.668497 GAACTGTATTACTTACTGGAAGGAATT 57.332 33.333 15.13 0.00 45.10 2.17
4345 4782 8.197592 TGAACTGTATTACTTACTGGAAGGAA 57.802 34.615 0.00 0.00 42.43 3.36
4346 4783 7.786046 TGAACTGTATTACTTACTGGAAGGA 57.214 36.000 4.37 0.00 39.74 3.36
4370 4810 4.403734 ACCAAATAACTCGGTGTTGGAAT 58.596 39.130 7.69 0.00 41.05 3.01
4376 4816 2.370849 ACCAGACCAAATAACTCGGTGT 59.629 45.455 0.00 0.00 31.63 4.16
4381 4821 5.548406 ACTACACACCAGACCAAATAACTC 58.452 41.667 0.00 0.00 0.00 3.01
4404 6100 1.410882 GTAACACAGCAGGCCCAAAAA 59.589 47.619 0.00 0.00 0.00 1.94
4461 6412 1.270414 ACCAGGGAGCCAGTGATCAG 61.270 60.000 0.00 0.00 0.00 2.90
4510 6486 1.599071 GATGTGTGCATGGTGGTATCG 59.401 52.381 0.00 0.00 35.07 2.92
4513 6489 0.695347 TGGATGTGTGCATGGTGGTA 59.305 50.000 0.00 0.00 35.07 3.25
4517 6493 2.646930 CATACTGGATGTGTGCATGGT 58.353 47.619 0.00 0.00 35.07 3.55
4530 6506 3.493350 GGGAGTAGATGTGTGCATACTGG 60.493 52.174 15.05 0.00 35.07 4.00
4569 6596 6.867519 TGGTTCATAGTGGAATCTCTACAA 57.132 37.500 0.00 0.00 29.47 2.41
4570 6597 6.384015 ACATGGTTCATAGTGGAATCTCTACA 59.616 38.462 0.00 0.00 29.47 2.74
4571 6598 6.821388 ACATGGTTCATAGTGGAATCTCTAC 58.179 40.000 0.00 0.00 0.00 2.59
4572 6599 7.255486 CGTACATGGTTCATAGTGGAATCTCTA 60.255 40.741 0.00 0.00 0.00 2.43
4573 6600 5.965033 ACATGGTTCATAGTGGAATCTCT 57.035 39.130 0.00 0.00 0.00 3.10
4574 6601 5.692204 CGTACATGGTTCATAGTGGAATCTC 59.308 44.000 0.00 0.00 0.00 2.75
4575 6602 5.453339 CCGTACATGGTTCATAGTGGAATCT 60.453 44.000 0.00 0.00 0.00 2.40
4577 6604 4.407621 TCCGTACATGGTTCATAGTGGAAT 59.592 41.667 0.00 0.00 0.00 3.01
4578 6605 3.770388 TCCGTACATGGTTCATAGTGGAA 59.230 43.478 0.00 0.00 0.00 3.53
4579 6606 3.367321 TCCGTACATGGTTCATAGTGGA 58.633 45.455 0.00 0.00 0.00 4.02
4580 6607 3.812156 TCCGTACATGGTTCATAGTGG 57.188 47.619 0.00 0.00 0.00 4.00
4583 6610 9.952188 CTATATACATCCGTACATGGTTCATAG 57.048 37.037 0.00 0.00 0.00 2.23
4585 6612 8.589701 TCTATATACATCCGTACATGGTTCAT 57.410 34.615 0.00 0.00 0.00 2.57
4590 6617 5.915196 CGCATCTATATACATCCGTACATGG 59.085 44.000 0.00 0.00 0.00 3.66
4591 6618 6.495706 ACGCATCTATATACATCCGTACATG 58.504 40.000 0.00 0.00 0.00 3.21
4593 6620 6.505044 AACGCATCTATATACATCCGTACA 57.495 37.500 0.00 0.00 0.00 2.90
4594 6621 7.807687 AAAACGCATCTATATACATCCGTAC 57.192 36.000 0.00 0.00 0.00 3.67
4595 6622 9.563898 CTTAAAACGCATCTATATACATCCGTA 57.436 33.333 0.00 0.00 0.00 4.02
4596 6623 8.086522 ACTTAAAACGCATCTATATACATCCGT 58.913 33.333 0.00 0.00 0.00 4.69
4597 6624 8.462143 ACTTAAAACGCATCTATATACATCCG 57.538 34.615 0.00 0.00 0.00 4.18
4619 6673 9.412460 TGGAGCAAAATGAATGAATCTATACTT 57.588 29.630 0.00 0.00 0.00 2.24
4632 6686 6.318648 GTGGACTACATATGGAGCAAAATGAA 59.681 38.462 15.30 0.00 0.00 2.57
4655 6709 4.469945 TCTTTGTAGGGATTCCACTAGGTG 59.530 45.833 4.80 0.00 35.89 4.00
4656 6710 4.470304 GTCTTTGTAGGGATTCCACTAGGT 59.530 45.833 4.80 0.00 35.89 3.08
4657 6711 4.717280 AGTCTTTGTAGGGATTCCACTAGG 59.283 45.833 4.80 0.00 34.83 3.02
4658 6712 5.941555 AGTCTTTGTAGGGATTCCACTAG 57.058 43.478 4.80 0.00 34.83 2.57
4659 6713 7.989947 ATAAGTCTTTGTAGGGATTCCACTA 57.010 36.000 4.80 1.21 34.83 2.74
4660 6714 6.893020 ATAAGTCTTTGTAGGGATTCCACT 57.107 37.500 4.80 2.18 34.83 4.00
4668 6722 9.257651 CGTTCCTAAATATAAGTCTTTGTAGGG 57.742 37.037 0.00 0.00 0.00 3.53
4673 6727 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
4682 6736 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
4694 6748 4.743955 GCATAAGGAACATGTACTCCCTCC 60.744 50.000 12.16 8.23 31.50 4.30
4733 6787 2.119801 AAAGCATCTTCCGTGAGCAT 57.880 45.000 0.00 0.00 0.00 3.79
4740 6794 9.787532 TTGATTTATTTCTTAAAGCATCTTCCG 57.212 29.630 0.00 0.00 43.58 4.30
4766 6820 8.823220 ATAAGCACTGGTACTTATGGAAAAAT 57.177 30.769 5.67 0.00 37.62 1.82
4789 6843 2.911636 TGGAACGGAGGGGTACAAAATA 59.088 45.455 0.00 0.00 0.00 1.40
4797 6851 1.990327 AGTAATTTGGAACGGAGGGGT 59.010 47.619 0.00 0.00 0.00 4.95
4798 6852 2.752903 CAAGTAATTTGGAACGGAGGGG 59.247 50.000 0.00 0.00 32.95 4.79
4799 6853 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
4800 6854 4.069304 TGACAAGTAATTTGGAACGGAGG 58.931 43.478 0.00 0.00 41.25 4.30
4802 6856 6.642707 ATTTGACAAGTAATTTGGAACGGA 57.357 33.333 0.00 0.00 41.25 4.69
4803 6857 6.920758 TCAATTTGACAAGTAATTTGGAACGG 59.079 34.615 0.00 0.00 41.25 4.44
4805 6859 8.223100 GCATCAATTTGACAAGTAATTTGGAAC 58.777 33.333 0.15 0.00 41.25 3.62
4809 6863 6.092533 GGGGCATCAATTTGACAAGTAATTTG 59.907 38.462 0.15 0.00 42.68 2.32
4811 6865 5.624281 CGGGGCATCAATTTGACAAGTAATT 60.624 40.000 0.15 0.00 0.00 1.40
4812 6866 4.142182 CGGGGCATCAATTTGACAAGTAAT 60.142 41.667 0.15 0.00 0.00 1.89
4813 6867 3.192422 CGGGGCATCAATTTGACAAGTAA 59.808 43.478 0.15 0.00 0.00 2.24
4814 6868 2.752354 CGGGGCATCAATTTGACAAGTA 59.248 45.455 0.15 0.00 0.00 2.24
4815 6869 1.545582 CGGGGCATCAATTTGACAAGT 59.454 47.619 0.15 0.00 0.00 3.16
4816 6870 1.818060 TCGGGGCATCAATTTGACAAG 59.182 47.619 0.15 0.00 0.00 3.16
4817 6871 1.916506 TCGGGGCATCAATTTGACAA 58.083 45.000 0.15 0.00 0.00 3.18
4818 6872 1.916506 TTCGGGGCATCAATTTGACA 58.083 45.000 0.15 0.00 0.00 3.58
4820 6874 4.277476 AGTAATTCGGGGCATCAATTTGA 58.723 39.130 0.75 0.75 0.00 2.69
4821 6875 4.654091 AGTAATTCGGGGCATCAATTTG 57.346 40.909 0.00 0.00 0.00 2.32
4822 6876 4.466015 ACAAGTAATTCGGGGCATCAATTT 59.534 37.500 0.00 0.00 0.00 1.82
4823 6877 4.023291 ACAAGTAATTCGGGGCATCAATT 58.977 39.130 0.00 0.00 0.00 2.32
4824 6878 3.381272 CACAAGTAATTCGGGGCATCAAT 59.619 43.478 0.00 0.00 0.00 2.57
4825 6879 2.752354 CACAAGTAATTCGGGGCATCAA 59.248 45.455 0.00 0.00 0.00 2.57
4827 6881 1.676006 CCACAAGTAATTCGGGGCATC 59.324 52.381 0.00 0.00 0.00 3.91
4828 6882 1.762708 CCACAAGTAATTCGGGGCAT 58.237 50.000 0.00 0.00 0.00 4.40
4830 6884 0.963355 TGCCACAAGTAATTCGGGGC 60.963 55.000 10.46 10.46 40.29 5.80
4831 6885 1.540267 TTGCCACAAGTAATTCGGGG 58.460 50.000 0.00 0.00 0.00 5.73
4832 6886 3.651803 TTTTGCCACAAGTAATTCGGG 57.348 42.857 0.00 0.00 0.00 5.14
4833 6887 4.388469 CCATTTTTGCCACAAGTAATTCGG 59.612 41.667 0.00 0.00 0.00 4.30
4834 6888 5.226396 TCCATTTTTGCCACAAGTAATTCG 58.774 37.500 0.00 0.00 0.00 3.34
4835 6889 8.947055 ATATCCATTTTTGCCACAAGTAATTC 57.053 30.769 0.00 0.00 0.00 2.17
4839 6893 8.995027 AGATATATCCATTTTTGCCACAAGTA 57.005 30.769 9.18 0.00 0.00 2.24
4841 6895 9.288576 TCTAGATATATCCATTTTTGCCACAAG 57.711 33.333 9.18 0.00 0.00 3.16
4842 6896 9.066892 GTCTAGATATATCCATTTTTGCCACAA 57.933 33.333 9.18 0.00 0.00 3.33
4843 6897 7.387673 CGTCTAGATATATCCATTTTTGCCACA 59.612 37.037 9.18 0.00 0.00 4.17
4844 6898 7.602644 TCGTCTAGATATATCCATTTTTGCCAC 59.397 37.037 9.18 0.00 0.00 5.01
4845 6899 7.676004 TCGTCTAGATATATCCATTTTTGCCA 58.324 34.615 9.18 0.00 0.00 4.92
4875 6929 9.120538 GGCAGAAATGGATGTATTTAGAACTAA 57.879 33.333 0.00 0.00 30.78 2.24
4876 6930 8.494433 AGGCAGAAATGGATGTATTTAGAACTA 58.506 33.333 0.00 0.00 30.78 2.24
4877 6931 7.284034 CAGGCAGAAATGGATGTATTTAGAACT 59.716 37.037 0.00 0.00 30.78 3.01
4878 6932 7.420800 CAGGCAGAAATGGATGTATTTAGAAC 58.579 38.462 0.00 0.00 30.78 3.01
4879 6933 6.039717 GCAGGCAGAAATGGATGTATTTAGAA 59.960 38.462 0.00 0.00 30.78 2.10
4881 6935 5.561532 CGCAGGCAGAAATGGATGTATTTAG 60.562 44.000 0.00 0.00 30.78 1.85
4883 6937 3.067180 CGCAGGCAGAAATGGATGTATTT 59.933 43.478 0.00 0.00 33.19 1.40
4884 6938 2.620115 CGCAGGCAGAAATGGATGTATT 59.380 45.455 0.00 0.00 0.00 1.89
4885 6939 2.158769 TCGCAGGCAGAAATGGATGTAT 60.159 45.455 0.00 0.00 0.00 2.29
4886 6940 1.209261 TCGCAGGCAGAAATGGATGTA 59.791 47.619 0.00 0.00 0.00 2.29
4887 6941 0.035152 TCGCAGGCAGAAATGGATGT 60.035 50.000 0.00 0.00 0.00 3.06
4888 6942 1.315690 ATCGCAGGCAGAAATGGATG 58.684 50.000 0.00 0.00 0.00 3.51
4889 6943 2.936919 TATCGCAGGCAGAAATGGAT 57.063 45.000 0.00 0.00 0.00 3.41
4890 6944 2.092968 ACTTATCGCAGGCAGAAATGGA 60.093 45.455 0.00 0.00 0.00 3.41
4891 6945 2.292267 ACTTATCGCAGGCAGAAATGG 58.708 47.619 0.00 0.00 0.00 3.16
4893 6947 5.050091 CGAATTACTTATCGCAGGCAGAAAT 60.050 40.000 0.00 0.00 31.71 2.17
4895 6949 3.802139 CGAATTACTTATCGCAGGCAGAA 59.198 43.478 0.00 0.00 31.71 3.02
4896 6950 3.381045 CGAATTACTTATCGCAGGCAGA 58.619 45.455 0.00 0.00 31.71 4.26
4897 6951 2.476619 CCGAATTACTTATCGCAGGCAG 59.523 50.000 0.00 0.00 37.73 4.85
4899 6953 1.798813 CCCGAATTACTTATCGCAGGC 59.201 52.381 0.00 0.00 37.73 4.85
4900 6954 3.057734 GTCCCGAATTACTTATCGCAGG 58.942 50.000 0.00 0.00 37.73 4.85
4901 6955 3.713288 TGTCCCGAATTACTTATCGCAG 58.287 45.455 0.00 0.00 37.73 5.18
4903 6957 3.973657 TCTGTCCCGAATTACTTATCGC 58.026 45.455 0.00 0.00 37.73 4.58
4904 6958 4.547532 CCTCTGTCCCGAATTACTTATCG 58.452 47.826 0.00 0.00 38.74 2.92
4905 6959 4.587684 TCCCTCTGTCCCGAATTACTTATC 59.412 45.833 0.00 0.00 0.00 1.75
4906 6960 4.553678 TCCCTCTGTCCCGAATTACTTAT 58.446 43.478 0.00 0.00 0.00 1.73
4911 6965 2.108168 CACTCCCTCTGTCCCGAATTA 58.892 52.381 0.00 0.00 0.00 1.40
4913 6967 0.252284 ACACTCCCTCTGTCCCGAAT 60.252 55.000 0.00 0.00 0.00 3.34
4914 6968 1.155390 ACACTCCCTCTGTCCCGAA 59.845 57.895 0.00 0.00 0.00 4.30
4916 6970 1.908793 ACACACTCCCTCTGTCCCG 60.909 63.158 0.00 0.00 0.00 5.14
4918 6972 0.759346 AACACACACTCCCTCTGTCC 59.241 55.000 0.00 0.00 0.00 4.02
4919 6973 2.891580 TCTAACACACACTCCCTCTGTC 59.108 50.000 0.00 0.00 0.00 3.51
4920 6974 2.958818 TCTAACACACACTCCCTCTGT 58.041 47.619 0.00 0.00 0.00 3.41
4921 6975 3.069586 TGTTCTAACACACACTCCCTCTG 59.930 47.826 0.00 0.00 33.17 3.35
4922 6976 3.305720 TGTTCTAACACACACTCCCTCT 58.694 45.455 0.00 0.00 33.17 3.69
4923 6977 3.069729 ACTGTTCTAACACACACTCCCTC 59.930 47.826 0.00 0.00 34.70 4.30
4931 6985 0.934496 TGCGCACTGTTCTAACACAC 59.066 50.000 5.66 0.00 34.70 3.82
4943 7254 2.980233 GCCCAGAACTTGCGCACT 60.980 61.111 11.12 0.00 30.80 4.40
4973 7284 0.183971 TTGAACAGGGGAAAAGCCGA 59.816 50.000 0.00 0.00 37.63 5.54
4977 7288 7.864108 ATTTTTCTTTTGAACAGGGGAAAAG 57.136 32.000 0.00 0.00 38.30 2.27
4978 7289 8.322091 TGTATTTTTCTTTTGAACAGGGGAAAA 58.678 29.630 0.00 0.00 38.30 2.29
4979 7290 7.852263 TGTATTTTTCTTTTGAACAGGGGAAA 58.148 30.769 0.00 0.00 38.30 3.13
4980 7291 7.425224 TGTATTTTTCTTTTGAACAGGGGAA 57.575 32.000 0.00 0.00 38.30 3.97
4982 7293 8.675705 AATTGTATTTTTCTTTTGAACAGGGG 57.324 30.769 0.00 0.00 38.30 4.79
4983 7294 8.773645 GGAATTGTATTTTTCTTTTGAACAGGG 58.226 33.333 0.00 0.00 38.30 4.45
5018 7330 4.512944 CCATGTTACCGAAGATGAATCCTG 59.487 45.833 0.00 0.00 0.00 3.86
5022 7334 6.180472 AGTTTCCATGTTACCGAAGATGAAT 58.820 36.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.