Multiple sequence alignment - TraesCS1B01G236200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G236200 chr1B 100.000 4685 0 0 1 4685 423563003 423558319 0.000000e+00 8652.0
1 TraesCS1B01G236200 chr1B 77.966 531 97 13 1 516 671461326 671460801 9.790000e-82 315.0
2 TraesCS1B01G236200 chr1B 78.400 500 94 12 1 493 566986990 566987482 3.520000e-81 313.0
3 TraesCS1B01G236200 chr1B 89.394 66 4 3 4604 4668 157762549 157762486 3.890000e-11 80.5
4 TraesCS1B01G236200 chr1D 95.365 2999 107 18 1039 4018 313203988 313201003 0.000000e+00 4739.0
5 TraesCS1B01G236200 chr1D 85.319 361 46 6 1 357 313205262 313204905 2.660000e-97 366.0
6 TraesCS1B01G236200 chr1D 97.423 194 4 1 4016 4209 313200909 313200717 3.490000e-86 329.0
7 TraesCS1B01G236200 chr1D 79.058 382 39 23 529 871 313204790 313204411 1.700000e-54 224.0
8 TraesCS1B01G236200 chr1D 91.525 59 4 1 1839 1896 75855242 75855184 3.890000e-11 80.5
9 TraesCS1B01G236200 chr1A 95.616 2281 78 12 1942 4206 392746424 392744150 0.000000e+00 3639.0
10 TraesCS1B01G236200 chr1A 93.808 856 30 10 1123 1956 392747376 392746522 0.000000e+00 1266.0
11 TraesCS1B01G236200 chr1A 82.133 750 90 24 1 726 392748950 392748221 1.870000e-168 603.0
12 TraesCS1B01G236200 chr1A 97.345 226 4 2 775 999 392747841 392747617 2.640000e-102 383.0
13 TraesCS1B01G236200 chr1A 90.741 54 4 1 1844 1896 93369197 93369250 2.340000e-08 71.3
14 TraesCS1B01G236200 chr1A 90.741 54 4 1 1844 1896 560439223 560439170 2.340000e-08 71.3
15 TraesCS1B01G236200 chr7D 79.048 525 94 10 1 513 102957371 102957891 3.470000e-91 346.0
16 TraesCS1B01G236200 chr7D 87.719 57 6 1 1844 1899 262997350 262997406 1.090000e-06 65.8
17 TraesCS1B01G236200 chr6D 78.400 500 94 12 1 493 16968017 16968509 3.520000e-81 313.0
18 TraesCS1B01G236200 chr6D 91.525 59 4 1 1839 1896 469369936 469369878 3.890000e-11 80.5
19 TraesCS1B01G236200 chr4B 77.953 508 94 16 1 497 637369596 637369096 7.620000e-78 302.0
20 TraesCS1B01G236200 chr4B 85.393 89 9 4 4579 4665 64294510 64294596 6.460000e-14 89.8
21 TraesCS1B01G236200 chr4B 81.132 106 20 0 4365 4470 293452974 293452869 8.350000e-13 86.1
22 TraesCS1B01G236200 chr3B 77.712 507 97 15 1 497 70456943 70457443 3.540000e-76 296.0
23 TraesCS1B01G236200 chr3B 77.800 500 98 11 1 493 735075137 735075630 3.540000e-76 296.0
24 TraesCS1B01G236200 chr3B 79.208 303 47 11 4365 4665 32067579 32067867 3.700000e-46 196.0
25 TraesCS1B01G236200 chr3B 81.944 144 20 6 4349 4491 432639838 432639976 2.960000e-22 117.0
26 TraesCS1B01G236200 chr3B 80.690 145 23 1 4366 4510 630742139 630742000 1.780000e-19 108.0
27 TraesCS1B01G236200 chr3B 94.545 55 2 1 4614 4668 157365073 157365020 3.000000e-12 84.2
28 TraesCS1B01G236200 chr2B 82.759 145 18 7 4349 4491 186774745 186774606 6.370000e-24 122.0
29 TraesCS1B01G236200 chr2B 84.884 86 9 4 4579 4662 248491149 248491232 3.000000e-12 84.2
30 TraesCS1B01G236200 chr2B 87.879 66 5 3 4604 4668 788706044 788705981 1.810000e-09 75.0
31 TraesCS1B01G236200 chr4A 87.671 73 7 2 4438 4510 315853590 315853520 3.000000e-12 84.2
32 TraesCS1B01G236200 chr4A 92.727 55 3 1 4614 4668 276131347 276131294 1.400000e-10 78.7
33 TraesCS1B01G236200 chr6B 82.609 92 14 2 4578 4668 17186265 17186175 3.890000e-11 80.5
34 TraesCS1B01G236200 chr7B 91.071 56 3 2 4608 4662 561972961 561973015 1.810000e-09 75.0
35 TraesCS1B01G236200 chr2D 89.831 59 5 1 1839 1896 131306065 131306007 1.810000e-09 75.0
36 TraesCS1B01G236200 chr5D 90.741 54 4 1 1844 1896 329429289 329429236 2.340000e-08 71.3
37 TraesCS1B01G236200 chr3D 90.741 54 4 1 1844 1896 373806744 373806691 2.340000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G236200 chr1B 423558319 423563003 4684 True 8652.00 8652 100.00000 1 4685 1 chr1B.!!$R2 4684
1 TraesCS1B01G236200 chr1B 671460801 671461326 525 True 315.00 315 77.96600 1 516 1 chr1B.!!$R3 515
2 TraesCS1B01G236200 chr1D 313200717 313205262 4545 True 1414.50 4739 89.29125 1 4209 4 chr1D.!!$R2 4208
3 TraesCS1B01G236200 chr1A 392744150 392748950 4800 True 1472.75 3639 92.22550 1 4206 4 chr1A.!!$R2 4205
4 TraesCS1B01G236200 chr7D 102957371 102957891 520 False 346.00 346 79.04800 1 513 1 chr7D.!!$F1 512
5 TraesCS1B01G236200 chr4B 637369096 637369596 500 True 302.00 302 77.95300 1 497 1 chr4B.!!$R2 496
6 TraesCS1B01G236200 chr3B 70456943 70457443 500 False 296.00 296 77.71200 1 497 1 chr3B.!!$F2 496


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 454 0.038021 TGTATGAAGCTTGCTGGCCA 59.962 50.0 2.10 4.71 0.00 5.36 F
899 1297 0.255890 CCATCACCATCCCGTTTCCT 59.744 55.0 0.00 0.00 0.00 3.36 F
1901 2629 1.226746 CCGGATCGAAAACCCTATGC 58.773 55.0 0.00 0.00 0.00 3.14 F
3120 3976 0.028505 GCATGCGCAACATCGAGAAT 59.971 50.0 17.11 0.00 36.64 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 2186 1.799548 GCCTTCTCGACGAGGCTAAAG 60.800 57.143 23.92 18.34 43.58 1.85 R
2635 3488 2.161609 CCAAACCCAAACATAGTCGCTC 59.838 50.000 0.00 0.00 0.00 5.03 R
3169 4025 0.035881 TCACTGCTGCCTTCCTGAAG 59.964 55.000 0.00 0.00 38.14 3.02 R
4314 5266 0.031857 TGCATTTGAAGTTGGCCACG 59.968 50.000 3.88 0.00 0.00 4.94 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 55 1.206371 GCCATGCATTTGCTTCTCCTT 59.794 47.619 10.09 0.00 42.66 3.36
73 77 2.289819 TGCGTGTAGGTTCCCTTTTAGG 60.290 50.000 0.00 0.00 34.61 2.69
98 102 3.636764 CCAGGTTTACCTTTGTTGAGCTT 59.363 43.478 0.00 0.00 46.09 3.74
101 105 5.531287 CAGGTTTACCTTTGTTGAGCTTAGT 59.469 40.000 0.00 0.00 46.09 2.24
124 128 0.890542 GCATGTTGGTGGTGCTCTGA 60.891 55.000 0.00 0.00 36.02 3.27
161 166 2.215196 ACAATGCGTCGGTTTTACACT 58.785 42.857 0.00 0.00 0.00 3.55
193 198 1.112113 TGAGGGTCTGTATCTTCCGC 58.888 55.000 0.00 0.00 0.00 5.54
211 216 2.501128 CGGATCGGTGCCTCATGT 59.499 61.111 0.00 0.00 0.00 3.21
252 258 1.681486 CCTTTCGGAGAGGAGGAGGC 61.681 65.000 8.88 0.00 42.06 4.70
264 270 1.035139 GAGGAGGCCGTAACCGAATA 58.965 55.000 0.00 0.00 35.63 1.75
269 275 1.144496 GCCGTAACCGAATAGGCCA 59.856 57.895 5.01 0.00 46.52 5.36
283 289 3.455469 GCCAGAGCCCATGCAACC 61.455 66.667 0.00 0.00 41.13 3.77
340 347 1.076044 AAGGCCTTGCTGGTGTGTT 60.076 52.632 19.73 0.00 38.35 3.32
343 350 1.675720 GGCCTTGCTGGTGTGTTTGT 61.676 55.000 0.00 0.00 38.35 2.83
393 400 6.697019 GCTTCATTGACTTCAAGCTGTTTTTA 59.303 34.615 0.00 0.00 39.47 1.52
407 415 5.877564 AGCTGTTTTTATGCCTTAGACTCTC 59.122 40.000 0.00 0.00 0.00 3.20
411 419 7.175104 TGTTTTTATGCCTTAGACTCTCCATT 58.825 34.615 0.00 0.00 0.00 3.16
440 450 4.002982 TGTAGGTTGTATGAAGCTTGCTG 58.997 43.478 2.10 0.00 0.00 4.41
444 454 0.038021 TGTATGAAGCTTGCTGGCCA 59.962 50.000 2.10 4.71 0.00 5.36
513 532 6.747414 TGTAAGTATGATGTAATCCTGGCT 57.253 37.500 0.00 0.00 44.73 4.75
584 618 3.669939 CCCCCTAATCCATTCAACACT 57.330 47.619 0.00 0.00 0.00 3.55
586 620 3.309121 CCCCCTAATCCATTCAACACTGT 60.309 47.826 0.00 0.00 0.00 3.55
596 630 4.330250 CATTCAACACTGTGGAGATCCTT 58.670 43.478 13.09 0.00 36.82 3.36
600 634 1.186200 CACTGTGGAGATCCTTCGGA 58.814 55.000 0.00 0.00 36.82 4.55
609 643 2.879646 GAGATCCTTCGGACATACGAGT 59.120 50.000 0.00 0.00 44.47 4.18
616 650 4.202080 CCTTCGGACATACGAGTAATTCCA 60.202 45.833 11.63 0.97 44.47 3.53
627 661 5.103000 ACGAGTAATTCCATCTTCTTCACG 58.897 41.667 0.00 0.00 0.00 4.35
639 697 8.668353 TCCATCTTCTTCACGATGAAAATAAAG 58.332 33.333 0.00 0.00 39.43 1.85
647 706 7.025485 TCACGATGAAAATAAAGCATGCATA 57.975 32.000 21.98 12.98 0.00 3.14
648 707 7.650890 TCACGATGAAAATAAAGCATGCATAT 58.349 30.769 21.98 14.75 0.00 1.78
649 708 8.136800 TCACGATGAAAATAAAGCATGCATATT 58.863 29.630 21.98 19.53 0.00 1.28
650 709 8.757789 CACGATGAAAATAAAGCATGCATATTT 58.242 29.630 24.46 24.46 32.20 1.40
651 710 9.316730 ACGATGAAAATAAAGCATGCATATTTT 57.683 25.926 32.39 32.39 40.22 1.82
722 781 3.904136 ATTGTGCTCTCAAGTTTTCGG 57.096 42.857 0.00 0.00 0.00 4.30
733 1096 6.782150 TCTCAAGTTTTCGGAAAAGAAAGAC 58.218 36.000 15.75 4.59 40.66 3.01
734 1097 6.598064 TCTCAAGTTTTCGGAAAAGAAAGACT 59.402 34.615 15.75 6.77 40.66 3.24
757 1120 9.092876 GACTGAAAGAGATAAATGAACACTAGG 57.907 37.037 0.00 0.00 37.43 3.02
758 1121 8.043710 ACTGAAAGAGATAAATGAACACTAGGG 58.956 37.037 0.00 0.00 37.43 3.53
764 1127 9.454859 AGAGATAAATGAACACTAGGGAAAAAG 57.545 33.333 0.00 0.00 0.00 2.27
765 1128 9.232473 GAGATAAATGAACACTAGGGAAAAAGT 57.768 33.333 0.00 0.00 0.00 2.66
767 1130 5.941948 AATGAACACTAGGGAAAAAGTCG 57.058 39.130 0.00 0.00 0.00 4.18
770 1133 5.054477 TGAACACTAGGGAAAAAGTCGAAG 58.946 41.667 0.00 0.00 0.00 3.79
772 1135 5.032327 ACACTAGGGAAAAAGTCGAAGTT 57.968 39.130 0.00 0.00 0.00 2.66
773 1136 6.165700 ACACTAGGGAAAAAGTCGAAGTTA 57.834 37.500 0.00 0.00 0.00 2.24
874 1272 1.268692 CCCACGCATTCATTCATTCCG 60.269 52.381 0.00 0.00 0.00 4.30
881 1279 4.552767 CGCATTCATTCATTCCGAGTTACC 60.553 45.833 0.00 0.00 0.00 2.85
899 1297 0.255890 CCATCACCATCCCGTTTCCT 59.744 55.000 0.00 0.00 0.00 3.36
1650 2357 5.304686 TCGCCTGGAAGATTATGGTAATT 57.695 39.130 0.00 0.00 34.07 1.40
1658 2365 6.321181 TGGAAGATTATGGTAATTGGCTTCAC 59.679 38.462 0.00 0.00 33.92 3.18
1660 2367 5.140454 AGATTATGGTAATTGGCTTCACCC 58.860 41.667 0.00 0.00 37.83 4.61
1718 2425 6.477688 GTGCTTGCTTGTACCTATCGTTTATA 59.522 38.462 0.00 0.00 0.00 0.98
1757 2472 8.262601 TGAGGCCTCTTAATTGTTCATATCTA 57.737 34.615 32.28 3.38 0.00 1.98
1794 2510 2.097110 TATCCTGGCTACGGTTGGAT 57.903 50.000 0.00 0.00 40.26 3.41
1848 2568 5.631481 GCTCCCCACCTAAACATCTCATTTA 60.631 44.000 0.00 0.00 0.00 1.40
1849 2569 6.395780 TCCCCACCTAAACATCTCATTTAA 57.604 37.500 0.00 0.00 0.00 1.52
1899 2627 3.538591 GAAACCGGATCGAAAACCCTAT 58.461 45.455 9.46 0.00 0.00 2.57
1901 2629 1.226746 CCGGATCGAAAACCCTATGC 58.773 55.000 0.00 0.00 0.00 3.14
1913 2641 2.738743 ACCCTATGCTTGGAAATGGTG 58.261 47.619 0.00 0.00 0.00 4.17
1924 2653 8.303780 TGCTTGGAAATGGTGATTTCATATTA 57.696 30.769 9.18 0.00 46.52 0.98
1956 2797 6.272822 ACCTATTGAAAACCAATCTTCAGC 57.727 37.500 0.00 0.00 43.96 4.26
1963 2804 3.347077 AACCAATCTTCAGCTCTGGAG 57.653 47.619 0.00 0.00 37.55 3.86
1967 2808 4.077822 CCAATCTTCAGCTCTGGAGTTTT 58.922 43.478 5.18 0.00 37.47 2.43
1978 2819 4.574013 GCTCTGGAGTTTTACATGATCTGG 59.426 45.833 0.00 0.00 0.00 3.86
2150 2991 7.041721 TGCTTGTAGATTTATTCATCTCGTGT 58.958 34.615 0.00 0.00 35.08 4.49
2153 2994 9.254133 CTTGTAGATTTATTCATCTCGTGTCAT 57.746 33.333 0.00 0.00 35.08 3.06
2163 3008 7.525688 TTCATCTCGTGTCATGTTCTTATTC 57.474 36.000 0.00 0.00 0.00 1.75
2168 3013 7.132863 TCTCGTGTCATGTTCTTATTCTATCG 58.867 38.462 0.00 0.00 0.00 2.92
2170 3015 7.922837 TCGTGTCATGTTCTTATTCTATCGTA 58.077 34.615 0.00 0.00 0.00 3.43
2260 3106 2.094442 CCATGCTGATCACATGTTTGCA 60.094 45.455 24.22 17.14 42.74 4.08
2356 3202 2.363306 TCAGTTGCAAATCACCACCT 57.637 45.000 0.00 0.00 0.00 4.00
2399 3245 8.432013 ACTATTATCATATGAAGAAGCACCACA 58.568 33.333 9.99 0.00 0.00 4.17
2463 3310 7.865385 TCATTTATTTGTTCTGTACTTGCCAAC 59.135 33.333 0.00 0.00 0.00 3.77
2471 3318 5.689383 TCTGTACTTGCCAACTGATTTTC 57.311 39.130 0.00 0.00 0.00 2.29
2568 3419 6.335777 ACATTTTGATACCGGAGTAGTACAC 58.664 40.000 9.46 0.00 0.00 2.90
2573 3424 5.012239 TGATACCGGAGTAGTACACAGTTT 58.988 41.667 9.46 0.00 0.00 2.66
2578 3429 3.994392 CGGAGTAGTACACAGTTTGCATT 59.006 43.478 2.52 0.00 0.00 3.56
2579 3430 4.451096 CGGAGTAGTACACAGTTTGCATTT 59.549 41.667 2.52 0.00 0.00 2.32
2631 3484 9.421399 TGGTATGATGAGTCTCTAGTATTTCAA 57.579 33.333 0.65 0.00 0.00 2.69
2641 3494 7.489757 AGTCTCTAGTATTTCAAAATGAGCGAC 59.510 37.037 0.00 4.40 0.00 5.19
2649 3502 7.801547 ATTTCAAAATGAGCGACTATGTTTG 57.198 32.000 0.00 0.00 0.00 2.93
2672 3525 5.885912 TGGGTTTGGATAGCTTTGAACTATC 59.114 40.000 0.00 2.80 43.47 2.08
2683 3536 4.094294 GCTTTGAACTATCGTATTGGTGCA 59.906 41.667 0.00 0.00 0.00 4.57
2684 3537 5.220854 GCTTTGAACTATCGTATTGGTGCAT 60.221 40.000 0.00 0.00 0.00 3.96
2685 3538 6.018262 GCTTTGAACTATCGTATTGGTGCATA 60.018 38.462 0.00 0.00 0.00 3.14
2730 3583 8.244802 TGCAGTGATTTCTACTAGAAGTCTTAC 58.755 37.037 17.60 11.02 40.37 2.34
2735 3588 9.842775 TGATTTCTACTAGAAGTCTTACGGATA 57.157 33.333 17.60 0.00 40.37 2.59
2805 3658 6.017440 TGTGTGATAACTTTAAGCACTCAACC 60.017 38.462 0.00 0.00 32.27 3.77
2806 3659 5.472137 TGTGATAACTTTAAGCACTCAACCC 59.528 40.000 0.00 0.00 0.00 4.11
2807 3660 5.705905 GTGATAACTTTAAGCACTCAACCCT 59.294 40.000 0.00 0.00 0.00 4.34
2808 3661 6.877322 GTGATAACTTTAAGCACTCAACCCTA 59.123 38.462 0.00 0.00 0.00 3.53
2854 3709 4.159321 TGCTCTTTCTGTCTCTGATACCAG 59.841 45.833 0.00 0.00 41.74 4.00
2874 3729 6.799827 ACCAGTCTCATATATCTTAGCTCCT 58.200 40.000 0.00 0.00 0.00 3.69
2952 3808 6.860080 AGATGCTGTTAAATTGGTCATTGAG 58.140 36.000 0.00 0.00 0.00 3.02
2967 3823 4.453819 GTCATTGAGTTCAAAGAGAGTGGG 59.546 45.833 0.00 0.00 39.55 4.61
2982 3838 2.038557 GAGTGGGCTGAAACCTGAAGTA 59.961 50.000 0.00 0.00 0.00 2.24
3051 3907 3.829886 TTCTCAAAGGCATTGCGTAAG 57.170 42.857 3.99 3.58 38.98 2.34
3094 3950 2.613691 GCTCAATTGCCAAACTGGATG 58.386 47.619 0.00 0.00 40.96 3.51
3120 3976 0.028505 GCATGCGCAACATCGAGAAT 59.971 50.000 17.11 0.00 36.64 2.40
3169 4025 5.408299 GGTGTTCTTTTATCAAATTGGGCAC 59.592 40.000 0.00 0.00 0.00 5.01
3499 4355 1.915614 GCGGATGCTTGATATGGGCG 61.916 60.000 0.00 0.00 38.39 6.13
3651 4507 4.393990 TGCGTCCTATATCTGTATGTACGG 59.606 45.833 0.00 0.00 0.00 4.02
3757 4613 4.161565 TGGCTTCGATTAGGTGTAGAATGT 59.838 41.667 0.00 0.00 0.00 2.71
4042 4994 6.308282 CCTCAGTTGTCTTCGTAATCTTGTAC 59.692 42.308 0.00 0.00 0.00 2.90
4072 5024 5.532406 CCTTCTCTGTTTTTGTTGATCCTGA 59.468 40.000 0.00 0.00 0.00 3.86
4076 5028 6.016860 TCTCTGTTTTTGTTGATCCTGATGTG 60.017 38.462 0.00 0.00 0.00 3.21
4209 5161 1.134371 GGGTAGGAATCTGACTGGCAC 60.134 57.143 0.00 0.00 0.00 5.01
4210 5162 1.555075 GGTAGGAATCTGACTGGCACA 59.445 52.381 0.00 0.00 0.00 4.57
4211 5163 2.171448 GGTAGGAATCTGACTGGCACAT 59.829 50.000 0.00 0.00 38.20 3.21
4212 5164 2.414994 AGGAATCTGACTGGCACATG 57.585 50.000 0.00 0.00 38.20 3.21
4213 5165 1.064906 AGGAATCTGACTGGCACATGG 60.065 52.381 0.00 0.00 38.20 3.66
4214 5166 1.386533 GAATCTGACTGGCACATGGG 58.613 55.000 0.00 0.00 38.20 4.00
4215 5167 0.700564 AATCTGACTGGCACATGGGT 59.299 50.000 0.00 0.00 38.20 4.51
4229 5181 4.591321 ACATGGGTGAAATGTATCTGGT 57.409 40.909 0.00 0.00 36.50 4.00
4230 5182 4.272489 ACATGGGTGAAATGTATCTGGTG 58.728 43.478 0.00 0.00 36.50 4.17
4231 5183 2.722094 TGGGTGAAATGTATCTGGTGC 58.278 47.619 0.00 0.00 0.00 5.01
4232 5184 2.308570 TGGGTGAAATGTATCTGGTGCT 59.691 45.455 0.00 0.00 0.00 4.40
4233 5185 3.245229 TGGGTGAAATGTATCTGGTGCTT 60.245 43.478 0.00 0.00 0.00 3.91
4234 5186 3.378427 GGGTGAAATGTATCTGGTGCTTC 59.622 47.826 0.00 0.00 0.00 3.86
4235 5187 3.378427 GGTGAAATGTATCTGGTGCTTCC 59.622 47.826 0.00 0.00 0.00 3.46
4236 5188 4.265073 GTGAAATGTATCTGGTGCTTCCT 58.735 43.478 0.80 0.00 37.07 3.36
4237 5189 4.333926 GTGAAATGTATCTGGTGCTTCCTC 59.666 45.833 0.80 0.00 37.07 3.71
4238 5190 3.567478 AATGTATCTGGTGCTTCCTCC 57.433 47.619 0.80 0.00 37.07 4.30
4239 5191 2.254152 TGTATCTGGTGCTTCCTCCT 57.746 50.000 0.80 0.00 37.07 3.69
4240 5192 3.398318 TGTATCTGGTGCTTCCTCCTA 57.602 47.619 0.80 0.00 37.07 2.94
4241 5193 3.719871 TGTATCTGGTGCTTCCTCCTAA 58.280 45.455 0.80 0.00 37.07 2.69
4242 5194 4.101114 TGTATCTGGTGCTTCCTCCTAAA 58.899 43.478 0.80 0.00 37.07 1.85
4243 5195 4.534500 TGTATCTGGTGCTTCCTCCTAAAA 59.466 41.667 0.80 0.00 37.07 1.52
4244 5196 4.657814 ATCTGGTGCTTCCTCCTAAAAA 57.342 40.909 0.80 0.00 37.07 1.94
4245 5197 3.751518 TCTGGTGCTTCCTCCTAAAAAC 58.248 45.455 0.80 0.00 37.07 2.43
4246 5198 3.137544 TCTGGTGCTTCCTCCTAAAAACA 59.862 43.478 0.80 0.00 37.07 2.83
4247 5199 4.082125 CTGGTGCTTCCTCCTAAAAACAT 58.918 43.478 0.80 0.00 37.07 2.71
4248 5200 3.826157 TGGTGCTTCCTCCTAAAAACATG 59.174 43.478 0.00 0.00 37.07 3.21
4249 5201 4.079253 GGTGCTTCCTCCTAAAAACATGA 58.921 43.478 0.00 0.00 0.00 3.07
4250 5202 4.706962 GGTGCTTCCTCCTAAAAACATGAT 59.293 41.667 0.00 0.00 0.00 2.45
4251 5203 5.885912 GGTGCTTCCTCCTAAAAACATGATA 59.114 40.000 0.00 0.00 0.00 2.15
4252 5204 6.183360 GGTGCTTCCTCCTAAAAACATGATAC 60.183 42.308 0.00 0.00 0.00 2.24
4253 5205 5.584649 TGCTTCCTCCTAAAAACATGATACG 59.415 40.000 0.00 0.00 0.00 3.06
4254 5206 5.815740 GCTTCCTCCTAAAAACATGATACGA 59.184 40.000 0.00 0.00 0.00 3.43
4255 5207 6.018669 GCTTCCTCCTAAAAACATGATACGAG 60.019 42.308 0.00 0.00 0.00 4.18
4256 5208 6.540438 TCCTCCTAAAAACATGATACGAGT 57.460 37.500 0.00 0.00 0.00 4.18
4257 5209 6.338146 TCCTCCTAAAAACATGATACGAGTG 58.662 40.000 0.00 0.00 0.00 3.51
4258 5210 6.070995 TCCTCCTAAAAACATGATACGAGTGT 60.071 38.462 0.00 0.00 0.00 3.55
4259 5211 6.594159 CCTCCTAAAAACATGATACGAGTGTT 59.406 38.462 0.00 0.00 37.66 3.32
4260 5212 7.201530 CCTCCTAAAAACATGATACGAGTGTTC 60.202 40.741 0.00 0.00 35.19 3.18
4261 5213 7.156000 TCCTAAAAACATGATACGAGTGTTCA 58.844 34.615 0.00 0.00 35.19 3.18
4262 5214 7.117236 TCCTAAAAACATGATACGAGTGTTCAC 59.883 37.037 0.00 0.00 35.19 3.18
4263 5215 4.903638 AAACATGATACGAGTGTTCACG 57.096 40.909 0.00 0.00 35.19 4.35
4264 5216 2.876091 ACATGATACGAGTGTTCACGG 58.124 47.619 0.00 0.00 32.37 4.94
4265 5217 2.193447 CATGATACGAGTGTTCACGGG 58.807 52.381 0.00 0.00 32.37 5.28
4266 5218 1.536940 TGATACGAGTGTTCACGGGA 58.463 50.000 0.00 0.00 32.37 5.14
4267 5219 1.887854 TGATACGAGTGTTCACGGGAA 59.112 47.619 0.00 0.00 32.37 3.97
4268 5220 2.094906 TGATACGAGTGTTCACGGGAAG 60.095 50.000 0.00 0.00 32.62 3.46
4269 5221 1.608055 TACGAGTGTTCACGGGAAGA 58.392 50.000 0.00 0.00 32.62 2.87
4270 5222 0.748450 ACGAGTGTTCACGGGAAGAA 59.252 50.000 0.00 0.00 32.62 2.52
4271 5223 1.343465 ACGAGTGTTCACGGGAAGAAT 59.657 47.619 0.00 0.00 32.62 2.40
4272 5224 1.993370 CGAGTGTTCACGGGAAGAATC 59.007 52.381 14.35 14.35 37.84 2.52
4273 5225 2.352814 CGAGTGTTCACGGGAAGAATCT 60.353 50.000 20.60 5.47 38.71 2.40
4274 5226 3.254892 GAGTGTTCACGGGAAGAATCTC 58.745 50.000 16.72 8.37 38.09 2.75
4275 5227 2.632996 AGTGTTCACGGGAAGAATCTCA 59.367 45.455 0.00 0.00 32.62 3.27
4276 5228 3.071023 AGTGTTCACGGGAAGAATCTCAA 59.929 43.478 0.00 0.00 32.62 3.02
4277 5229 3.433615 GTGTTCACGGGAAGAATCTCAAG 59.566 47.826 0.00 0.00 32.62 3.02
4278 5230 3.323691 TGTTCACGGGAAGAATCTCAAGA 59.676 43.478 0.00 0.00 32.62 3.02
4279 5231 4.202315 TGTTCACGGGAAGAATCTCAAGAA 60.202 41.667 0.00 0.00 32.62 2.52
4280 5232 4.617253 TCACGGGAAGAATCTCAAGAAA 57.383 40.909 0.00 0.00 0.00 2.52
4281 5233 5.165961 TCACGGGAAGAATCTCAAGAAAT 57.834 39.130 0.00 0.00 0.00 2.17
4282 5234 5.560724 TCACGGGAAGAATCTCAAGAAATT 58.439 37.500 0.00 0.00 0.00 1.82
4283 5235 6.003950 TCACGGGAAGAATCTCAAGAAATTT 58.996 36.000 0.00 0.00 0.00 1.82
4284 5236 6.072508 TCACGGGAAGAATCTCAAGAAATTTG 60.073 38.462 0.00 0.00 0.00 2.32
4285 5237 5.183904 ACGGGAAGAATCTCAAGAAATTTGG 59.816 40.000 0.00 0.00 0.00 3.28
4286 5238 5.414360 GGGAAGAATCTCAAGAAATTTGGC 58.586 41.667 0.00 0.00 0.00 4.52
4287 5239 5.047092 GGGAAGAATCTCAAGAAATTTGGCA 60.047 40.000 0.00 0.00 0.00 4.92
4288 5240 6.098017 GGAAGAATCTCAAGAAATTTGGCAG 58.902 40.000 0.00 0.00 0.00 4.85
4289 5241 5.069501 AGAATCTCAAGAAATTTGGCAGC 57.930 39.130 0.00 0.00 0.00 5.25
4290 5242 4.525487 AGAATCTCAAGAAATTTGGCAGCA 59.475 37.500 0.00 0.00 0.00 4.41
4291 5243 5.187186 AGAATCTCAAGAAATTTGGCAGCAT 59.813 36.000 0.00 0.00 0.00 3.79
4292 5244 4.877378 TCTCAAGAAATTTGGCAGCATT 57.123 36.364 0.00 0.00 0.00 3.56
4293 5245 5.217978 TCTCAAGAAATTTGGCAGCATTT 57.782 34.783 0.00 6.46 0.00 2.32
4294 5246 6.343716 TCTCAAGAAATTTGGCAGCATTTA 57.656 33.333 0.00 0.00 0.00 1.40
4295 5247 6.158598 TCTCAAGAAATTTGGCAGCATTTAC 58.841 36.000 0.00 2.83 0.00 2.01
4296 5248 6.015180 TCTCAAGAAATTTGGCAGCATTTACT 60.015 34.615 0.00 4.52 0.00 2.24
4297 5249 5.927689 TCAAGAAATTTGGCAGCATTTACTG 59.072 36.000 0.00 7.34 40.80 2.74
4298 5250 5.726980 AGAAATTTGGCAGCATTTACTGA 57.273 34.783 0.00 0.00 40.25 3.41
4299 5251 6.100404 AGAAATTTGGCAGCATTTACTGAA 57.900 33.333 0.00 0.00 40.25 3.02
4300 5252 6.523840 AGAAATTTGGCAGCATTTACTGAAA 58.476 32.000 0.00 0.00 40.25 2.69
4301 5253 6.991531 AGAAATTTGGCAGCATTTACTGAAAA 59.008 30.769 0.00 0.00 40.25 2.29
4302 5254 6.544038 AATTTGGCAGCATTTACTGAAAAC 57.456 33.333 0.00 0.00 40.25 2.43
4303 5255 4.935352 TTGGCAGCATTTACTGAAAACT 57.065 36.364 0.00 0.00 40.25 2.66
4304 5256 4.503741 TGGCAGCATTTACTGAAAACTC 57.496 40.909 0.00 0.00 40.25 3.01
4305 5257 3.888323 TGGCAGCATTTACTGAAAACTCA 59.112 39.130 0.00 0.00 40.25 3.41
4306 5258 4.340666 TGGCAGCATTTACTGAAAACTCAA 59.659 37.500 0.00 0.00 40.25 3.02
4307 5259 5.010922 TGGCAGCATTTACTGAAAACTCAAT 59.989 36.000 0.00 0.00 40.25 2.57
4308 5260 5.574443 GGCAGCATTTACTGAAAACTCAATC 59.426 40.000 0.00 0.00 40.25 2.67
4309 5261 6.385033 GCAGCATTTACTGAAAACTCAATCT 58.615 36.000 0.00 0.00 40.25 2.40
4310 5262 7.362056 GGCAGCATTTACTGAAAACTCAATCTA 60.362 37.037 0.00 0.00 40.25 1.98
4311 5263 8.023128 GCAGCATTTACTGAAAACTCAATCTAA 58.977 33.333 0.00 0.00 40.25 2.10
4318 5270 7.596749 ACTGAAAACTCAATCTAATACGTGG 57.403 36.000 0.00 0.00 0.00 4.94
4319 5271 6.092259 ACTGAAAACTCAATCTAATACGTGGC 59.908 38.462 0.00 0.00 0.00 5.01
4320 5272 5.353123 TGAAAACTCAATCTAATACGTGGCC 59.647 40.000 0.00 0.00 0.00 5.36
4321 5273 4.481368 AACTCAATCTAATACGTGGCCA 57.519 40.909 0.00 0.00 0.00 5.36
4322 5274 4.481368 ACTCAATCTAATACGTGGCCAA 57.519 40.909 7.24 0.00 0.00 4.52
4323 5275 4.189231 ACTCAATCTAATACGTGGCCAAC 58.811 43.478 7.24 0.15 0.00 3.77
4324 5276 4.081087 ACTCAATCTAATACGTGGCCAACT 60.081 41.667 7.24 0.00 0.00 3.16
4325 5277 4.839121 TCAATCTAATACGTGGCCAACTT 58.161 39.130 7.24 0.80 0.00 2.66
4326 5278 4.873827 TCAATCTAATACGTGGCCAACTTC 59.126 41.667 7.24 0.00 0.00 3.01
4327 5279 3.965379 TCTAATACGTGGCCAACTTCA 57.035 42.857 7.24 0.00 0.00 3.02
4328 5280 4.274602 TCTAATACGTGGCCAACTTCAA 57.725 40.909 7.24 0.00 0.00 2.69
4329 5281 4.643463 TCTAATACGTGGCCAACTTCAAA 58.357 39.130 7.24 0.00 0.00 2.69
4330 5282 5.250200 TCTAATACGTGGCCAACTTCAAAT 58.750 37.500 7.24 0.00 0.00 2.32
4331 5283 3.848272 ATACGTGGCCAACTTCAAATG 57.152 42.857 7.24 0.00 0.00 2.32
4332 5284 0.031994 ACGTGGCCAACTTCAAATGC 59.968 50.000 7.24 0.00 0.00 3.56
4333 5285 0.031857 CGTGGCCAACTTCAAATGCA 59.968 50.000 7.24 0.00 0.00 3.96
4334 5286 1.537776 CGTGGCCAACTTCAAATGCAA 60.538 47.619 7.24 0.00 0.00 4.08
4335 5287 2.137523 GTGGCCAACTTCAAATGCAAG 58.862 47.619 7.24 0.00 0.00 4.01
4336 5288 1.761784 TGGCCAACTTCAAATGCAAGT 59.238 42.857 0.61 0.00 35.51 3.16
4337 5289 2.170187 TGGCCAACTTCAAATGCAAGTT 59.830 40.909 0.61 0.00 43.46 2.66
4338 5290 3.205338 GGCCAACTTCAAATGCAAGTTT 58.795 40.909 0.00 0.00 41.25 2.66
4339 5291 4.141846 TGGCCAACTTCAAATGCAAGTTTA 60.142 37.500 0.61 0.00 41.25 2.01
4340 5292 4.813697 GGCCAACTTCAAATGCAAGTTTAA 59.186 37.500 0.00 0.00 41.25 1.52
4341 5293 5.469760 GGCCAACTTCAAATGCAAGTTTAAT 59.530 36.000 0.00 0.00 41.25 1.40
4342 5294 6.347644 GGCCAACTTCAAATGCAAGTTTAATC 60.348 38.462 0.00 0.00 41.25 1.75
4343 5295 6.424812 GCCAACTTCAAATGCAAGTTTAATCT 59.575 34.615 0.00 0.00 41.25 2.40
4344 5296 7.598493 GCCAACTTCAAATGCAAGTTTAATCTA 59.402 33.333 0.00 0.00 41.25 1.98
4345 5297 9.643693 CCAACTTCAAATGCAAGTTTAATCTAT 57.356 29.630 0.00 0.00 41.25 1.98
4351 5303 9.734620 TCAAATGCAAGTTTAATCTATACATGC 57.265 29.630 0.00 0.00 35.76 4.06
4352 5304 9.518906 CAAATGCAAGTTTAATCTATACATGCA 57.481 29.630 8.94 8.94 44.07 3.96
4356 5308 9.734620 TGCAAGTTTAATCTATACATGCAAATC 57.265 29.630 5.02 0.00 39.85 2.17
4357 5309 9.956720 GCAAGTTTAATCTATACATGCAAATCT 57.043 29.630 0.00 0.00 35.45 2.40
4366 5318 9.703892 ATCTATACATGCAAATCTAACTCAGAC 57.296 33.333 0.00 0.00 35.62 3.51
4367 5319 8.918116 TCTATACATGCAAATCTAACTCAGACT 58.082 33.333 0.00 0.00 35.62 3.24
4371 5323 8.206325 ACATGCAAATCTAACTCAGACTAATG 57.794 34.615 0.00 0.00 35.62 1.90
4372 5324 7.826252 ACATGCAAATCTAACTCAGACTAATGT 59.174 33.333 0.00 0.00 35.62 2.71
4373 5325 8.671921 CATGCAAATCTAACTCAGACTAATGTT 58.328 33.333 0.00 0.00 35.62 2.71
4374 5326 8.032952 TGCAAATCTAACTCAGACTAATGTTG 57.967 34.615 0.00 0.00 35.62 3.33
4375 5327 7.661437 TGCAAATCTAACTCAGACTAATGTTGT 59.339 33.333 0.00 0.00 35.62 3.32
4376 5328 8.507249 GCAAATCTAACTCAGACTAATGTTGTT 58.493 33.333 0.00 0.00 35.62 2.83
4380 5332 9.778741 ATCTAACTCAGACTAATGTTGTTTTCA 57.221 29.630 0.00 0.00 35.62 2.69
4381 5333 9.261180 TCTAACTCAGACTAATGTTGTTTTCAG 57.739 33.333 0.00 0.00 0.00 3.02
4382 5334 7.865706 AACTCAGACTAATGTTGTTTTCAGT 57.134 32.000 0.00 0.00 0.00 3.41
4383 5335 8.958119 AACTCAGACTAATGTTGTTTTCAGTA 57.042 30.769 0.00 0.00 0.00 2.74
4384 5336 8.594881 ACTCAGACTAATGTTGTTTTCAGTAG 57.405 34.615 0.00 0.00 38.75 2.57
4385 5337 8.421784 ACTCAGACTAATGTTGTTTTCAGTAGA 58.578 33.333 7.26 0.00 37.08 2.59
4386 5338 9.261180 CTCAGACTAATGTTGTTTTCAGTAGAA 57.739 33.333 7.26 0.00 37.08 2.10
4387 5339 9.042008 TCAGACTAATGTTGTTTTCAGTAGAAC 57.958 33.333 7.26 0.00 37.08 3.01
4388 5340 9.046296 CAGACTAATGTTGTTTTCAGTAGAACT 57.954 33.333 7.26 4.26 37.08 3.01
4395 5347 7.981142 TGTTGTTTTCAGTAGAACTACTTTGG 58.019 34.615 11.21 2.47 43.35 3.28
4396 5348 7.608761 TGTTGTTTTCAGTAGAACTACTTTGGT 59.391 33.333 11.21 0.00 43.35 3.67
4397 5349 7.548196 TGTTTTCAGTAGAACTACTTTGGTG 57.452 36.000 11.21 2.66 43.35 4.17
4398 5350 7.107542 TGTTTTCAGTAGAACTACTTTGGTGT 58.892 34.615 11.21 0.00 43.35 4.16
4399 5351 7.608761 TGTTTTCAGTAGAACTACTTTGGTGTT 59.391 33.333 11.21 0.00 43.35 3.32
4400 5352 9.101655 GTTTTCAGTAGAACTACTTTGGTGTTA 57.898 33.333 11.21 0.00 43.35 2.41
4401 5353 9.841295 TTTTCAGTAGAACTACTTTGGTGTTAT 57.159 29.630 11.21 0.00 43.35 1.89
4402 5354 9.841295 TTTCAGTAGAACTACTTTGGTGTTATT 57.159 29.630 11.21 0.00 43.35 1.40
4403 5355 9.841295 TTCAGTAGAACTACTTTGGTGTTATTT 57.159 29.630 11.21 0.00 43.35 1.40
4404 5356 9.841295 TCAGTAGAACTACTTTGGTGTTATTTT 57.159 29.630 11.21 0.00 43.35 1.82
4441 5393 7.930513 AAAATTTCTCAGAATTGGACGAAAC 57.069 32.000 0.00 0.00 30.06 2.78
4442 5394 6.884280 AATTTCTCAGAATTGGACGAAACT 57.116 33.333 0.00 0.00 0.00 2.66
4443 5395 6.884280 ATTTCTCAGAATTGGACGAAACTT 57.116 33.333 0.00 0.00 0.00 2.66
4444 5396 6.693315 TTTCTCAGAATTGGACGAAACTTT 57.307 33.333 0.00 0.00 0.00 2.66
4445 5397 7.795482 TTTCTCAGAATTGGACGAAACTTTA 57.205 32.000 0.00 0.00 0.00 1.85
4446 5398 6.780706 TCTCAGAATTGGACGAAACTTTAC 57.219 37.500 0.00 0.00 0.00 2.01
4447 5399 5.404366 TCTCAGAATTGGACGAAACTTTACG 59.596 40.000 0.00 0.00 0.00 3.18
4448 5400 4.449743 TCAGAATTGGACGAAACTTTACGG 59.550 41.667 0.00 0.00 0.00 4.02
4449 5401 4.449743 CAGAATTGGACGAAACTTTACGGA 59.550 41.667 0.00 0.00 0.00 4.69
4450 5402 4.689345 AGAATTGGACGAAACTTTACGGAG 59.311 41.667 0.00 0.00 0.00 4.63
4451 5403 2.443887 TGGACGAAACTTTACGGAGG 57.556 50.000 0.00 0.00 0.00 4.30
4452 5404 1.688197 TGGACGAAACTTTACGGAGGT 59.312 47.619 0.00 0.00 0.00 3.85
4453 5405 2.102925 TGGACGAAACTTTACGGAGGTT 59.897 45.455 0.00 0.00 0.00 3.50
4454 5406 3.133691 GGACGAAACTTTACGGAGGTTT 58.866 45.455 0.00 1.26 36.12 3.27
4455 5407 3.561310 GGACGAAACTTTACGGAGGTTTT 59.439 43.478 0.00 0.00 34.00 2.43
4456 5408 4.035558 GGACGAAACTTTACGGAGGTTTTT 59.964 41.667 0.00 0.00 34.00 1.94
4496 5448 7.724305 AAAATACTTGAGCAAAGAAGTACGA 57.276 32.000 6.20 0.00 37.46 3.43
4497 5449 6.952935 AATACTTGAGCAAAGAAGTACGAG 57.047 37.500 6.20 0.00 37.46 4.18
4498 5450 4.585955 ACTTGAGCAAAGAAGTACGAGA 57.414 40.909 6.20 0.00 39.38 4.04
4499 5451 4.551388 ACTTGAGCAAAGAAGTACGAGAG 58.449 43.478 6.20 0.00 39.38 3.20
4500 5452 3.577649 TGAGCAAAGAAGTACGAGAGG 57.422 47.619 0.00 0.00 0.00 3.69
4501 5453 2.231478 TGAGCAAAGAAGTACGAGAGGG 59.769 50.000 0.00 0.00 0.00 4.30
4502 5454 1.550976 AGCAAAGAAGTACGAGAGGGG 59.449 52.381 0.00 0.00 0.00 4.79
4503 5455 1.405661 GCAAAGAAGTACGAGAGGGGG 60.406 57.143 0.00 0.00 0.00 5.40
4522 5474 2.658422 CCACCATGGGCAACAAGC 59.342 61.111 18.09 0.00 44.65 4.01
4540 5492 4.954970 CACAGGGCGTGCCTTGGT 62.955 66.667 24.46 11.44 46.03 3.67
4541 5493 4.954970 ACAGGGCGTGCCTTGGTG 62.955 66.667 24.46 13.00 46.03 4.17
4551 5503 4.597032 CCTTGGTGGCTTGTTGGA 57.403 55.556 0.00 0.00 0.00 3.53
4552 5504 2.344535 CCTTGGTGGCTTGTTGGAG 58.655 57.895 0.00 0.00 0.00 3.86
4553 5505 0.468029 CCTTGGTGGCTTGTTGGAGT 60.468 55.000 0.00 0.00 0.00 3.85
4554 5506 1.402787 CTTGGTGGCTTGTTGGAGTT 58.597 50.000 0.00 0.00 0.00 3.01
4555 5507 1.067516 CTTGGTGGCTTGTTGGAGTTG 59.932 52.381 0.00 0.00 0.00 3.16
4556 5508 0.033601 TGGTGGCTTGTTGGAGTTGT 60.034 50.000 0.00 0.00 0.00 3.32
4557 5509 1.111277 GGTGGCTTGTTGGAGTTGTT 58.889 50.000 0.00 0.00 0.00 2.83
4558 5510 1.202405 GGTGGCTTGTTGGAGTTGTTG 60.202 52.381 0.00 0.00 0.00 3.33
4559 5511 0.459489 TGGCTTGTTGGAGTTGTTGC 59.541 50.000 0.00 0.00 0.00 4.17
4560 5512 0.249447 GGCTTGTTGGAGTTGTTGCC 60.249 55.000 0.00 0.00 0.00 4.52
4561 5513 0.746659 GCTTGTTGGAGTTGTTGCCT 59.253 50.000 0.00 0.00 0.00 4.75
4562 5514 1.269257 GCTTGTTGGAGTTGTTGCCTC 60.269 52.381 0.00 0.00 0.00 4.70
4566 5518 4.898607 GGAGTTGTTGCCTCCACA 57.101 55.556 1.64 0.00 46.46 4.17
4567 5519 3.346426 GGAGTTGTTGCCTCCACAT 57.654 52.632 1.64 0.00 46.46 3.21
4568 5520 2.489938 GGAGTTGTTGCCTCCACATA 57.510 50.000 1.64 0.00 46.46 2.29
4569 5521 2.084546 GGAGTTGTTGCCTCCACATAC 58.915 52.381 1.64 0.00 46.46 2.39
4570 5522 2.290323 GGAGTTGTTGCCTCCACATACT 60.290 50.000 1.64 0.00 46.46 2.12
4571 5523 3.412386 GAGTTGTTGCCTCCACATACTT 58.588 45.455 0.00 0.00 0.00 2.24
4572 5524 3.412386 AGTTGTTGCCTCCACATACTTC 58.588 45.455 0.00 0.00 0.00 3.01
4573 5525 2.488153 GTTGTTGCCTCCACATACTTCC 59.512 50.000 0.00 0.00 0.00 3.46
4574 5526 1.338674 TGTTGCCTCCACATACTTCCG 60.339 52.381 0.00 0.00 0.00 4.30
4575 5527 0.251916 TTGCCTCCACATACTTCCGG 59.748 55.000 0.00 0.00 0.00 5.14
4576 5528 0.907704 TGCCTCCACATACTTCCGGT 60.908 55.000 0.00 0.00 0.00 5.28
4577 5529 0.252197 GCCTCCACATACTTCCGGTT 59.748 55.000 0.00 0.00 0.00 4.44
4578 5530 2.012051 GCCTCCACATACTTCCGGTTG 61.012 57.143 0.00 0.00 0.00 3.77
4579 5531 1.553248 CCTCCACATACTTCCGGTTGA 59.447 52.381 0.00 0.00 0.00 3.18
4580 5532 2.618053 CTCCACATACTTCCGGTTGAC 58.382 52.381 0.00 0.00 0.00 3.18
4581 5533 1.276989 TCCACATACTTCCGGTTGACC 59.723 52.381 0.00 0.00 0.00 4.02
4582 5534 1.278127 CCACATACTTCCGGTTGACCT 59.722 52.381 0.00 0.00 0.00 3.85
4583 5535 2.498481 CCACATACTTCCGGTTGACCTA 59.502 50.000 0.00 0.00 0.00 3.08
4584 5536 3.055675 CCACATACTTCCGGTTGACCTAA 60.056 47.826 0.00 0.00 0.00 2.69
4585 5537 4.383770 CCACATACTTCCGGTTGACCTAAT 60.384 45.833 0.00 0.00 0.00 1.73
4586 5538 5.183228 CACATACTTCCGGTTGACCTAATT 58.817 41.667 0.00 0.00 0.00 1.40
4587 5539 5.293569 CACATACTTCCGGTTGACCTAATTC 59.706 44.000 0.00 0.00 0.00 2.17
4588 5540 5.189145 ACATACTTCCGGTTGACCTAATTCT 59.811 40.000 0.00 0.00 0.00 2.40
4589 5541 6.381994 ACATACTTCCGGTTGACCTAATTCTA 59.618 38.462 0.00 0.00 0.00 2.10
4590 5542 5.750352 ACTTCCGGTTGACCTAATTCTAA 57.250 39.130 0.00 0.00 0.00 2.10
4591 5543 5.731591 ACTTCCGGTTGACCTAATTCTAAG 58.268 41.667 0.00 0.00 0.00 2.18
4592 5544 4.133013 TCCGGTTGACCTAATTCTAAGC 57.867 45.455 0.00 0.00 0.00 3.09
4593 5545 3.118519 TCCGGTTGACCTAATTCTAAGCC 60.119 47.826 0.00 0.00 0.00 4.35
4594 5546 3.118371 CCGGTTGACCTAATTCTAAGCCT 60.118 47.826 0.00 0.00 0.00 4.58
4595 5547 4.100498 CCGGTTGACCTAATTCTAAGCCTA 59.900 45.833 0.00 0.00 0.00 3.93
4596 5548 5.221661 CCGGTTGACCTAATTCTAAGCCTAT 60.222 44.000 0.00 0.00 0.00 2.57
4597 5549 6.014840 CCGGTTGACCTAATTCTAAGCCTATA 60.015 42.308 0.00 0.00 0.00 1.31
4598 5550 7.439381 CGGTTGACCTAATTCTAAGCCTATAA 58.561 38.462 0.00 0.00 0.00 0.98
4599 5551 7.599245 CGGTTGACCTAATTCTAAGCCTATAAG 59.401 40.741 0.00 0.00 0.00 1.73
4600 5552 8.430431 GGTTGACCTAATTCTAAGCCTATAAGT 58.570 37.037 0.00 0.00 0.00 2.24
4601 5553 9.833917 GTTGACCTAATTCTAAGCCTATAAGTT 57.166 33.333 0.00 0.00 0.00 2.66
4604 5556 9.194271 GACCTAATTCTAAGCCTATAAGTTTCG 57.806 37.037 0.00 0.00 0.00 3.46
4605 5557 8.702819 ACCTAATTCTAAGCCTATAAGTTTCGT 58.297 33.333 0.00 0.00 0.00 3.85
4606 5558 9.194271 CCTAATTCTAAGCCTATAAGTTTCGTC 57.806 37.037 0.00 0.00 0.00 4.20
4607 5559 9.968870 CTAATTCTAAGCCTATAAGTTTCGTCT 57.031 33.333 0.00 0.00 0.00 4.18
4609 5561 8.874744 ATTCTAAGCCTATAAGTTTCGTCTTC 57.125 34.615 0.00 0.00 0.00 2.87
4610 5562 6.803642 TCTAAGCCTATAAGTTTCGTCTTCC 58.196 40.000 0.00 0.00 0.00 3.46
4611 5563 4.403585 AGCCTATAAGTTTCGTCTTCCC 57.596 45.455 0.00 0.00 0.00 3.97
4612 5564 3.773119 AGCCTATAAGTTTCGTCTTCCCA 59.227 43.478 0.00 0.00 0.00 4.37
4613 5565 4.224370 AGCCTATAAGTTTCGTCTTCCCAA 59.776 41.667 0.00 0.00 0.00 4.12
4614 5566 4.571176 GCCTATAAGTTTCGTCTTCCCAAG 59.429 45.833 0.00 0.00 0.00 3.61
4615 5567 5.626116 GCCTATAAGTTTCGTCTTCCCAAGA 60.626 44.000 0.00 0.00 34.51 3.02
4616 5568 6.403878 CCTATAAGTTTCGTCTTCCCAAGAA 58.596 40.000 0.00 0.00 39.67 2.52
4617 5569 6.877322 CCTATAAGTTTCGTCTTCCCAAGAAA 59.123 38.462 0.00 0.00 39.67 2.52
4618 5570 7.389607 CCTATAAGTTTCGTCTTCCCAAGAAAA 59.610 37.037 0.00 0.00 39.67 2.29
4619 5571 5.907866 AAGTTTCGTCTTCCCAAGAAAAA 57.092 34.783 0.00 0.00 39.67 1.94
4620 5572 5.500645 AGTTTCGTCTTCCCAAGAAAAAG 57.499 39.130 0.00 0.00 39.67 2.27
4621 5573 5.190677 AGTTTCGTCTTCCCAAGAAAAAGA 58.809 37.500 0.00 0.00 39.67 2.52
4622 5574 5.650703 AGTTTCGTCTTCCCAAGAAAAAGAA 59.349 36.000 0.00 0.00 39.67 2.52
4623 5575 6.321435 AGTTTCGTCTTCCCAAGAAAAAGAAT 59.679 34.615 0.00 0.00 39.67 2.40
4624 5576 5.941948 TCGTCTTCCCAAGAAAAAGAATC 57.058 39.130 0.00 0.00 39.67 2.52
4625 5577 5.373222 TCGTCTTCCCAAGAAAAAGAATCA 58.627 37.500 0.00 0.00 39.67 2.57
4626 5578 5.470098 TCGTCTTCCCAAGAAAAAGAATCAG 59.530 40.000 0.00 0.00 39.67 2.90
4627 5579 5.470098 CGTCTTCCCAAGAAAAAGAATCAGA 59.530 40.000 0.00 0.00 39.67 3.27
4628 5580 6.348050 CGTCTTCCCAAGAAAAAGAATCAGAG 60.348 42.308 0.00 0.00 39.67 3.35
4629 5581 6.712547 GTCTTCCCAAGAAAAAGAATCAGAGA 59.287 38.462 0.00 0.00 39.67 3.10
4630 5582 6.939163 TCTTCCCAAGAAAAAGAATCAGAGAG 59.061 38.462 0.00 0.00 33.83 3.20
4631 5583 6.439636 TCCCAAGAAAAAGAATCAGAGAGA 57.560 37.500 0.00 0.00 0.00 3.10
4632 5584 6.841601 TCCCAAGAAAAAGAATCAGAGAGAA 58.158 36.000 0.00 0.00 0.00 2.87
4633 5585 7.290061 TCCCAAGAAAAAGAATCAGAGAGAAA 58.710 34.615 0.00 0.00 0.00 2.52
4634 5586 7.446625 TCCCAAGAAAAAGAATCAGAGAGAAAG 59.553 37.037 0.00 0.00 0.00 2.62
4635 5587 7.230309 CCCAAGAAAAAGAATCAGAGAGAAAGT 59.770 37.037 0.00 0.00 0.00 2.66
4636 5588 8.628280 CCAAGAAAAAGAATCAGAGAGAAAGTT 58.372 33.333 0.00 0.00 0.00 2.66
4639 5591 8.555361 AGAAAAAGAATCAGAGAGAAAGTTTCG 58.445 33.333 9.91 0.00 34.02 3.46
4640 5592 7.793927 AAAAGAATCAGAGAGAAAGTTTCGT 57.206 32.000 9.91 1.75 34.02 3.85
4641 5593 7.414814 AAAGAATCAGAGAGAAAGTTTCGTC 57.585 36.000 9.91 10.66 34.02 4.20
4642 5594 5.157781 AGAATCAGAGAGAAAGTTTCGTCG 58.842 41.667 9.91 7.80 34.02 5.12
4643 5595 2.662700 TCAGAGAGAAAGTTTCGTCGC 58.337 47.619 9.91 9.52 34.02 5.19
4644 5596 1.383744 CAGAGAGAAAGTTTCGTCGCG 59.616 52.381 9.91 0.00 34.02 5.87
4645 5597 1.001597 AGAGAGAAAGTTTCGTCGCGT 60.002 47.619 5.77 0.00 34.02 6.01
4646 5598 1.785430 GAGAGAAAGTTTCGTCGCGTT 59.215 47.619 5.77 0.00 34.02 4.84
4647 5599 2.199236 AGAGAAAGTTTCGTCGCGTTT 58.801 42.857 5.77 0.00 34.02 3.60
4648 5600 2.606272 AGAGAAAGTTTCGTCGCGTTTT 59.394 40.909 5.77 0.00 34.02 2.43
4649 5601 3.798337 AGAGAAAGTTTCGTCGCGTTTTA 59.202 39.130 5.77 0.00 34.02 1.52
4650 5602 3.853727 AGAAAGTTTCGTCGCGTTTTAC 58.146 40.909 5.77 0.00 34.02 2.01
4651 5603 2.268700 AAGTTTCGTCGCGTTTTACG 57.731 45.000 11.36 11.36 45.88 3.18
4652 5604 1.476074 AGTTTCGTCGCGTTTTACGA 58.524 45.000 15.58 15.58 46.05 3.43
4653 5605 2.053627 AGTTTCGTCGCGTTTTACGAT 58.946 42.857 19.35 4.50 46.44 3.73
4654 5606 3.233578 AGTTTCGTCGCGTTTTACGATA 58.766 40.909 19.35 13.05 46.44 2.92
4655 5607 3.853671 AGTTTCGTCGCGTTTTACGATAT 59.146 39.130 19.35 7.70 46.44 1.63
4656 5608 3.804262 TTCGTCGCGTTTTACGATATG 57.196 42.857 19.35 0.00 46.44 1.78
4657 5609 2.110990 TCGTCGCGTTTTACGATATGG 58.889 47.619 15.58 0.00 46.05 2.74
4658 5610 2.110990 CGTCGCGTTTTACGATATGGA 58.889 47.619 12.12 0.00 46.05 3.41
4659 5611 2.150611 CGTCGCGTTTTACGATATGGAG 59.849 50.000 12.12 0.00 46.05 3.86
4660 5612 2.097541 GTCGCGTTTTACGATATGGAGC 60.098 50.000 5.77 0.00 46.05 4.70
4661 5613 1.191647 CGCGTTTTACGATATGGAGCC 59.808 52.381 0.00 0.00 46.05 4.70
4662 5614 2.206750 GCGTTTTACGATATGGAGCCA 58.793 47.619 3.04 0.00 46.05 4.75
4663 5615 2.033151 GCGTTTTACGATATGGAGCCAC 60.033 50.000 3.04 0.00 46.05 5.01
4664 5616 2.542595 CGTTTTACGATATGGAGCCACC 59.457 50.000 0.00 0.00 46.05 4.61
4665 5617 3.740141 CGTTTTACGATATGGAGCCACCT 60.740 47.826 0.00 0.00 46.05 4.00
4666 5618 3.746045 TTTACGATATGGAGCCACCTC 57.254 47.619 0.00 0.00 39.86 3.85
4675 5627 3.542046 GAGCCACCTCCTGTTCTTC 57.458 57.895 0.00 0.00 31.68 2.87
4676 5628 0.687354 GAGCCACCTCCTGTTCTTCA 59.313 55.000 0.00 0.00 31.68 3.02
4677 5629 1.280421 GAGCCACCTCCTGTTCTTCAT 59.720 52.381 0.00 0.00 31.68 2.57
4678 5630 1.280421 AGCCACCTCCTGTTCTTCATC 59.720 52.381 0.00 0.00 0.00 2.92
4679 5631 1.003580 GCCACCTCCTGTTCTTCATCA 59.996 52.381 0.00 0.00 0.00 3.07
4680 5632 2.938756 GCCACCTCCTGTTCTTCATCAG 60.939 54.545 0.00 0.00 0.00 2.90
4681 5633 2.568956 CCACCTCCTGTTCTTCATCAGA 59.431 50.000 0.00 0.00 34.02 3.27
4682 5634 3.008375 CCACCTCCTGTTCTTCATCAGAA 59.992 47.826 0.00 0.00 39.39 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.874086 CAAATGCATGGCGAGACTGATA 59.126 45.455 0.00 0.00 0.00 2.15
24 25 1.089112 CAAATGCATGGCGAGACTGA 58.911 50.000 0.00 0.00 0.00 3.41
98 102 0.476338 ACCACCAACATGCACCACTA 59.524 50.000 0.00 0.00 0.00 2.74
101 105 2.497173 GCACCACCAACATGCACCA 61.497 57.895 0.00 0.00 39.23 4.17
124 128 3.593442 TTGTCACCTGGAAGACCAAAT 57.407 42.857 17.01 0.00 46.32 2.32
161 166 1.628846 GACCCTCACCCAAGAGCTAAA 59.371 52.381 0.00 0.00 34.26 1.85
252 258 0.748450 TCTGGCCTATTCGGTTACGG 59.252 55.000 3.32 0.00 41.39 4.02
269 275 2.045926 GTCGGTTGCATGGGCTCT 60.046 61.111 0.00 0.00 41.91 4.09
283 289 3.736252 CAGGTGAGAGTAACACTTTGTCG 59.264 47.826 0.00 0.00 38.20 4.35
340 347 2.280797 GAGCAGGCCACGACACAA 60.281 61.111 5.01 0.00 0.00 3.33
343 350 4.056125 CGAGAGCAGGCCACGACA 62.056 66.667 5.01 0.00 0.00 4.35
393 400 4.400567 GCAAAAATGGAGAGTCTAAGGCAT 59.599 41.667 0.00 0.00 0.00 4.40
407 415 6.686630 TCATACAACCTACAAGCAAAAATGG 58.313 36.000 0.00 0.00 0.00 3.16
411 419 5.534654 AGCTTCATACAACCTACAAGCAAAA 59.465 36.000 4.43 0.00 38.98 2.44
513 532 4.572571 AAGCCCGGCGTTGTTCCA 62.573 61.111 6.01 0.00 0.00 3.53
516 535 3.284449 GTCAAGCCCGGCGTTGTT 61.284 61.111 6.01 0.00 0.00 2.83
564 598 3.290710 CAGTGTTGAATGGATTAGGGGG 58.709 50.000 0.00 0.00 0.00 5.40
565 599 3.696051 CACAGTGTTGAATGGATTAGGGG 59.304 47.826 0.00 0.00 0.00 4.79
596 630 4.825634 AGATGGAATTACTCGTATGTCCGA 59.174 41.667 0.00 0.00 35.22 4.55
600 634 7.707035 GTGAAGAAGATGGAATTACTCGTATGT 59.293 37.037 0.00 0.00 0.00 2.29
609 643 8.560355 TTTTCATCGTGAAGAAGATGGAATTA 57.440 30.769 5.73 0.00 40.74 1.40
616 650 8.044060 TGCTTTATTTTCATCGTGAAGAAGAT 57.956 30.769 12.98 0.00 37.70 2.40
654 713 9.635404 TCTTCTTTAGACCAAAATTAAGGACAA 57.365 29.630 3.29 0.00 0.00 3.18
655 714 9.807921 ATCTTCTTTAGACCAAAATTAAGGACA 57.192 29.630 3.29 0.00 35.19 4.02
733 1096 8.260818 TCCCTAGTGTTCATTTATCTCTTTCAG 58.739 37.037 0.00 0.00 0.00 3.02
734 1097 8.146053 TCCCTAGTGTTCATTTATCTCTTTCA 57.854 34.615 0.00 0.00 0.00 2.69
757 1120 6.471198 CACTGGTTTTAACTTCGACTTTTTCC 59.529 38.462 0.00 0.00 0.00 3.13
758 1121 6.471198 CCACTGGTTTTAACTTCGACTTTTTC 59.529 38.462 0.00 0.00 0.00 2.29
764 1127 3.002965 CCACCACTGGTTTTAACTTCGAC 59.997 47.826 0.00 0.00 31.02 4.20
765 1128 3.207778 CCACCACTGGTTTTAACTTCGA 58.792 45.455 0.00 0.00 31.02 3.71
874 1272 1.485066 ACGGGATGGTGATGGTAACTC 59.515 52.381 0.00 0.00 37.61 3.01
881 1279 2.017049 GAAGGAAACGGGATGGTGATG 58.983 52.381 0.00 0.00 0.00 3.07
1479 2186 1.799548 GCCTTCTCGACGAGGCTAAAG 60.800 57.143 23.92 18.34 43.58 1.85
1650 2357 1.856873 AGGGGAATGGGTGAAGCCA 60.857 57.895 3.28 3.28 39.65 4.75
1658 2365 2.170397 GGTAAAATTGCAGGGGAATGGG 59.830 50.000 0.00 0.00 0.00 4.00
1660 2367 2.836981 TGGGTAAAATTGCAGGGGAATG 59.163 45.455 0.00 0.00 0.00 2.67
1768 2484 2.972713 ACCGTAGCCAGGATATGAACAT 59.027 45.455 5.43 0.00 0.00 2.71
1854 2582 8.101309 TCCCTTATAAACTGGATCAATTCTCA 57.899 34.615 0.00 0.00 0.00 3.27
1886 2614 3.644966 TCCAAGCATAGGGTTTTCGAT 57.355 42.857 0.00 0.00 30.99 3.59
1889 2617 4.222810 ACCATTTCCAAGCATAGGGTTTTC 59.777 41.667 0.00 0.00 30.99 2.29
1894 2622 3.017048 TCACCATTTCCAAGCATAGGG 57.983 47.619 0.00 0.00 0.00 3.53
1899 2627 6.795144 ATATGAAATCACCATTTCCAAGCA 57.205 33.333 5.25 0.00 45.24 3.91
1924 2653 9.178758 GATTGGTTTTCAATAGGTAGTTCTGAT 57.821 33.333 0.00 0.00 45.36 2.90
1927 2656 9.232473 GAAGATTGGTTTTCAATAGGTAGTTCT 57.768 33.333 0.00 0.00 45.36 3.01
1933 2662 6.012745 AGCTGAAGATTGGTTTTCAATAGGT 58.987 36.000 0.00 0.00 45.36 3.08
1956 2797 5.982356 TCCAGATCATGTAAAACTCCAGAG 58.018 41.667 0.00 0.00 0.00 3.35
2016 2857 2.478894 CACGAAAGGTACCATCACACAC 59.521 50.000 15.94 0.00 0.00 3.82
2163 3008 8.873830 CAAAGGCATGTTATCCTAATACGATAG 58.126 37.037 0.00 0.00 35.17 2.08
2197 3043 4.002982 TGACTGAACCATGTGCTCATAAC 58.997 43.478 0.04 0.00 32.47 1.89
2420 3266 3.634397 ATGACATGACTACCCTTGGTG 57.366 47.619 0.00 0.00 36.19 4.17
2455 3302 6.128849 CCATAAAACGAAAATCAGTTGGCAAG 60.129 38.462 0.00 0.00 0.00 4.01
2463 3310 8.129211 GGATAAGGACCATAAAACGAAAATCAG 58.871 37.037 0.00 0.00 0.00 2.90
2471 3318 7.052248 AGGTTTAGGATAAGGACCATAAAACG 58.948 38.462 0.00 0.00 32.68 3.60
2556 3407 3.021269 TGCAAACTGTGTACTACTCCG 57.979 47.619 0.00 0.00 0.00 4.63
2631 3484 3.686016 ACCCAAACATAGTCGCTCATTT 58.314 40.909 0.00 0.00 0.00 2.32
2635 3488 2.161609 CCAAACCCAAACATAGTCGCTC 59.838 50.000 0.00 0.00 0.00 5.03
2641 3494 6.152661 TCAAAGCTATCCAAACCCAAACATAG 59.847 38.462 0.00 0.00 0.00 2.23
2649 3502 5.007724 CGATAGTTCAAAGCTATCCAAACCC 59.992 44.000 0.00 0.00 40.83 4.11
2672 3525 8.128582 ACAGTTTGATTTATATGCACCAATACG 58.871 33.333 0.00 0.00 0.00 3.06
2685 3538 8.959548 TCACTGCATCAATACAGTTTGATTTAT 58.040 29.630 7.74 0.00 44.59 1.40
2695 3548 7.783090 AGTAGAAATCACTGCATCAATACAG 57.217 36.000 0.00 0.00 39.86 2.74
2730 3583 7.751793 GTGTGGTAAGTTGGTAAAAATTATCCG 59.248 37.037 0.00 0.00 0.00 4.18
2735 3588 7.070074 TGGATGTGTGGTAAGTTGGTAAAAATT 59.930 33.333 0.00 0.00 0.00 1.82
2745 3598 6.976934 AAAGAAATGGATGTGTGGTAAGTT 57.023 33.333 0.00 0.00 0.00 2.66
2805 3658 3.793559 ACGGTGTTTATAAGCAGCTAGG 58.206 45.455 23.34 13.78 35.81 3.02
2806 3659 4.270325 GGAACGGTGTTTATAAGCAGCTAG 59.730 45.833 23.34 14.34 35.81 3.42
2807 3660 4.186159 GGAACGGTGTTTATAAGCAGCTA 58.814 43.478 23.34 0.00 35.81 3.32
2808 3661 3.007635 GGAACGGTGTTTATAAGCAGCT 58.992 45.455 23.34 10.42 35.81 4.24
2854 3709 9.771534 AAAAACAGGAGCTAAGATATATGAGAC 57.228 33.333 0.00 0.00 0.00 3.36
2952 3808 2.550830 TCAGCCCACTCTCTTTGAAC 57.449 50.000 0.00 0.00 0.00 3.18
3000 3856 3.507622 GCTCTTTAACCAAGGCAGTCAAT 59.492 43.478 0.00 0.00 32.64 2.57
3051 3907 4.394300 CCATCCTTCACTGACAGATTCAAC 59.606 45.833 10.08 0.00 32.21 3.18
3094 3950 1.989966 ATGTTGCGCATGCTCTCAGC 61.990 55.000 12.75 11.83 43.34 4.26
3107 3963 6.304356 TGGATTGATAATTCTCGATGTTGC 57.696 37.500 0.00 0.00 0.00 4.17
3120 3976 9.545928 CCATCCCCTAATAATTTGGATTGATAA 57.454 33.333 0.00 0.00 33.60 1.75
3169 4025 0.035881 TCACTGCTGCCTTCCTGAAG 59.964 55.000 0.00 0.00 38.14 3.02
3499 4355 5.141182 TCTGTCCAGGTAATCAGGAGATAC 58.859 45.833 0.00 0.00 33.08 2.24
3651 4507 4.110482 GCATCATCCACAGCTTGAATTTC 58.890 43.478 0.00 0.00 0.00 2.17
4042 4994 3.139077 ACAAAAACAGAGAAGGGCTACG 58.861 45.455 0.00 0.00 0.00 3.51
4072 5024 5.856156 TGATTTCATGTTCAAAAGGCACAT 58.144 33.333 0.00 0.00 33.41 3.21
4076 5028 7.424227 TTCAATGATTTCATGTTCAAAAGGC 57.576 32.000 0.00 0.00 36.56 4.35
4209 5161 3.067180 GCACCAGATACATTTCACCCATG 59.933 47.826 0.00 0.00 0.00 3.66
4210 5162 3.053395 AGCACCAGATACATTTCACCCAT 60.053 43.478 0.00 0.00 0.00 4.00
4211 5163 2.308570 AGCACCAGATACATTTCACCCA 59.691 45.455 0.00 0.00 0.00 4.51
4212 5164 3.004752 AGCACCAGATACATTTCACCC 57.995 47.619 0.00 0.00 0.00 4.61
4213 5165 3.378427 GGAAGCACCAGATACATTTCACC 59.622 47.826 0.00 0.00 38.79 4.02
4214 5166 4.265073 AGGAAGCACCAGATACATTTCAC 58.735 43.478 2.96 0.00 42.04 3.18
4215 5167 4.517285 GAGGAAGCACCAGATACATTTCA 58.483 43.478 2.96 0.00 42.04 2.69
4216 5168 3.879892 GGAGGAAGCACCAGATACATTTC 59.120 47.826 2.96 0.00 42.04 2.17
4217 5169 3.525199 AGGAGGAAGCACCAGATACATTT 59.475 43.478 2.96 0.00 42.04 2.32
4218 5170 3.118531 AGGAGGAAGCACCAGATACATT 58.881 45.455 2.96 0.00 42.04 2.71
4219 5171 2.769209 AGGAGGAAGCACCAGATACAT 58.231 47.619 2.96 0.00 42.04 2.29
4220 5172 2.254152 AGGAGGAAGCACCAGATACA 57.746 50.000 2.96 0.00 42.04 2.29
4221 5173 4.755266 TTTAGGAGGAAGCACCAGATAC 57.245 45.455 2.96 0.00 42.04 2.24
4222 5174 5.013704 TGTTTTTAGGAGGAAGCACCAGATA 59.986 40.000 2.96 0.00 42.04 1.98
4223 5175 4.202567 TGTTTTTAGGAGGAAGCACCAGAT 60.203 41.667 2.96 0.00 42.04 2.90
4224 5176 3.137544 TGTTTTTAGGAGGAAGCACCAGA 59.862 43.478 2.96 0.00 42.04 3.86
4225 5177 3.486383 TGTTTTTAGGAGGAAGCACCAG 58.514 45.455 2.96 0.00 42.04 4.00
4226 5178 3.586470 TGTTTTTAGGAGGAAGCACCA 57.414 42.857 2.96 0.00 42.04 4.17
4227 5179 4.079253 TCATGTTTTTAGGAGGAAGCACC 58.921 43.478 0.00 0.00 39.35 5.01
4228 5180 5.904362 ATCATGTTTTTAGGAGGAAGCAC 57.096 39.130 0.00 0.00 0.00 4.40
4229 5181 5.584649 CGTATCATGTTTTTAGGAGGAAGCA 59.415 40.000 0.00 0.00 0.00 3.91
4230 5182 5.815740 TCGTATCATGTTTTTAGGAGGAAGC 59.184 40.000 0.00 0.00 0.00 3.86
4231 5183 7.010552 CACTCGTATCATGTTTTTAGGAGGAAG 59.989 40.741 15.11 0.00 34.02 3.46
4232 5184 6.816640 CACTCGTATCATGTTTTTAGGAGGAA 59.183 38.462 15.11 0.00 34.02 3.36
4233 5185 6.070995 ACACTCGTATCATGTTTTTAGGAGGA 60.071 38.462 15.11 0.00 34.02 3.71
4234 5186 6.106673 ACACTCGTATCATGTTTTTAGGAGG 58.893 40.000 15.11 10.08 34.02 4.30
4235 5187 7.330946 TGAACACTCGTATCATGTTTTTAGGAG 59.669 37.037 0.00 4.67 36.70 3.69
4236 5188 7.117236 GTGAACACTCGTATCATGTTTTTAGGA 59.883 37.037 0.00 0.00 36.70 2.94
4237 5189 7.234384 GTGAACACTCGTATCATGTTTTTAGG 58.766 38.462 0.00 0.00 36.70 2.69
4238 5190 6.948228 CGTGAACACTCGTATCATGTTTTTAG 59.052 38.462 3.51 0.00 36.70 1.85
4239 5191 6.128769 CCGTGAACACTCGTATCATGTTTTTA 60.129 38.462 3.51 0.00 36.70 1.52
4240 5192 5.333798 CCGTGAACACTCGTATCATGTTTTT 60.334 40.000 3.51 0.00 36.70 1.94
4241 5193 4.151689 CCGTGAACACTCGTATCATGTTTT 59.848 41.667 3.51 0.00 36.70 2.43
4242 5194 3.678072 CCGTGAACACTCGTATCATGTTT 59.322 43.478 3.51 0.00 36.70 2.83
4243 5195 3.250744 CCGTGAACACTCGTATCATGTT 58.749 45.455 3.51 0.00 39.23 2.71
4244 5196 2.416836 CCCGTGAACACTCGTATCATGT 60.417 50.000 3.51 0.00 0.00 3.21
4245 5197 2.159296 TCCCGTGAACACTCGTATCATG 60.159 50.000 3.51 0.00 0.00 3.07
4246 5198 2.097036 TCCCGTGAACACTCGTATCAT 58.903 47.619 3.51 0.00 0.00 2.45
4247 5199 1.536940 TCCCGTGAACACTCGTATCA 58.463 50.000 3.51 0.00 0.00 2.15
4248 5200 2.163010 TCTTCCCGTGAACACTCGTATC 59.837 50.000 3.51 0.00 0.00 2.24
4249 5201 2.165167 TCTTCCCGTGAACACTCGTAT 58.835 47.619 3.51 0.00 0.00 3.06
4250 5202 1.608055 TCTTCCCGTGAACACTCGTA 58.392 50.000 3.51 0.00 0.00 3.43
4251 5203 0.748450 TTCTTCCCGTGAACACTCGT 59.252 50.000 3.51 0.00 0.00 4.18
4252 5204 1.993370 GATTCTTCCCGTGAACACTCG 59.007 52.381 3.51 0.00 0.00 4.18
4253 5205 3.254892 GAGATTCTTCCCGTGAACACTC 58.745 50.000 3.51 0.00 0.00 3.51
4254 5206 2.632996 TGAGATTCTTCCCGTGAACACT 59.367 45.455 3.51 0.00 0.00 3.55
4255 5207 3.040147 TGAGATTCTTCCCGTGAACAC 57.960 47.619 0.00 0.00 0.00 3.32
4256 5208 3.323691 TCTTGAGATTCTTCCCGTGAACA 59.676 43.478 0.00 0.00 0.00 3.18
4257 5209 3.926616 TCTTGAGATTCTTCCCGTGAAC 58.073 45.455 0.00 0.00 0.00 3.18
4258 5210 4.617253 TTCTTGAGATTCTTCCCGTGAA 57.383 40.909 0.00 0.00 0.00 3.18
4259 5211 4.617253 TTTCTTGAGATTCTTCCCGTGA 57.383 40.909 0.00 0.00 0.00 4.35
4260 5212 5.886960 AATTTCTTGAGATTCTTCCCGTG 57.113 39.130 0.00 0.00 0.00 4.94
4261 5213 5.183904 CCAAATTTCTTGAGATTCTTCCCGT 59.816 40.000 0.00 0.00 0.00 5.28
4262 5214 5.644644 CCAAATTTCTTGAGATTCTTCCCG 58.355 41.667 0.00 0.00 0.00 5.14
4263 5215 5.047092 TGCCAAATTTCTTGAGATTCTTCCC 60.047 40.000 0.00 0.00 0.00 3.97
4264 5216 6.029346 TGCCAAATTTCTTGAGATTCTTCC 57.971 37.500 0.00 0.00 0.00 3.46
4265 5217 5.575995 GCTGCCAAATTTCTTGAGATTCTTC 59.424 40.000 0.00 0.00 0.00 2.87
4266 5218 5.011329 TGCTGCCAAATTTCTTGAGATTCTT 59.989 36.000 0.00 0.00 0.00 2.52
4267 5219 4.525487 TGCTGCCAAATTTCTTGAGATTCT 59.475 37.500 0.00 0.00 0.00 2.40
4268 5220 4.813027 TGCTGCCAAATTTCTTGAGATTC 58.187 39.130 0.00 0.00 0.00 2.52
4269 5221 4.877378 TGCTGCCAAATTTCTTGAGATT 57.123 36.364 0.00 0.00 0.00 2.40
4270 5222 5.416271 AATGCTGCCAAATTTCTTGAGAT 57.584 34.783 0.00 0.00 0.00 2.75
4271 5223 4.877378 AATGCTGCCAAATTTCTTGAGA 57.123 36.364 0.00 0.00 0.00 3.27
4272 5224 6.090358 CAGTAAATGCTGCCAAATTTCTTGAG 59.910 38.462 0.00 0.00 0.00 3.02
4273 5225 5.927689 CAGTAAATGCTGCCAAATTTCTTGA 59.072 36.000 0.00 0.00 0.00 3.02
4274 5226 5.927689 TCAGTAAATGCTGCCAAATTTCTTG 59.072 36.000 0.00 0.32 36.49 3.02
4275 5227 6.100404 TCAGTAAATGCTGCCAAATTTCTT 57.900 33.333 0.00 0.00 36.49 2.52
4276 5228 5.726980 TCAGTAAATGCTGCCAAATTTCT 57.273 34.783 0.00 0.00 36.49 2.52
4277 5229 6.783892 TTTCAGTAAATGCTGCCAAATTTC 57.216 33.333 0.00 0.00 36.49 2.17
4278 5230 6.767423 AGTTTTCAGTAAATGCTGCCAAATTT 59.233 30.769 0.00 0.00 36.49 1.82
4279 5231 6.290605 AGTTTTCAGTAAATGCTGCCAAATT 58.709 32.000 0.00 0.00 36.49 1.82
4280 5232 5.857268 AGTTTTCAGTAAATGCTGCCAAAT 58.143 33.333 0.00 0.00 36.49 2.32
4281 5233 5.163468 TGAGTTTTCAGTAAATGCTGCCAAA 60.163 36.000 0.00 0.00 36.49 3.28
4282 5234 4.340666 TGAGTTTTCAGTAAATGCTGCCAA 59.659 37.500 0.00 0.00 36.49 4.52
4283 5235 3.888323 TGAGTTTTCAGTAAATGCTGCCA 59.112 39.130 0.00 0.00 36.49 4.92
4284 5236 4.503741 TGAGTTTTCAGTAAATGCTGCC 57.496 40.909 0.00 0.00 36.49 4.85
4285 5237 6.385033 AGATTGAGTTTTCAGTAAATGCTGC 58.615 36.000 0.00 0.00 36.49 5.25
4292 5244 9.146984 CCACGTATTAGATTGAGTTTTCAGTAA 57.853 33.333 0.00 0.00 34.15 2.24
4293 5245 7.277098 GCCACGTATTAGATTGAGTTTTCAGTA 59.723 37.037 0.00 0.00 34.15 2.74
4294 5246 6.092259 GCCACGTATTAGATTGAGTTTTCAGT 59.908 38.462 0.00 0.00 34.15 3.41
4295 5247 6.456988 GGCCACGTATTAGATTGAGTTTTCAG 60.457 42.308 0.00 0.00 34.15 3.02
4296 5248 5.353123 GGCCACGTATTAGATTGAGTTTTCA 59.647 40.000 0.00 0.00 0.00 2.69
4297 5249 5.353123 TGGCCACGTATTAGATTGAGTTTTC 59.647 40.000 0.00 0.00 0.00 2.29
4298 5250 5.250200 TGGCCACGTATTAGATTGAGTTTT 58.750 37.500 0.00 0.00 0.00 2.43
4299 5251 4.839121 TGGCCACGTATTAGATTGAGTTT 58.161 39.130 0.00 0.00 0.00 2.66
4300 5252 4.481368 TGGCCACGTATTAGATTGAGTT 57.519 40.909 0.00 0.00 0.00 3.01
4301 5253 4.081087 AGTTGGCCACGTATTAGATTGAGT 60.081 41.667 3.88 0.00 0.00 3.41
4302 5254 4.442706 AGTTGGCCACGTATTAGATTGAG 58.557 43.478 3.88 0.00 0.00 3.02
4303 5255 4.481368 AGTTGGCCACGTATTAGATTGA 57.519 40.909 3.88 0.00 0.00 2.57
4304 5256 4.634004 TGAAGTTGGCCACGTATTAGATTG 59.366 41.667 3.88 0.00 0.00 2.67
4305 5257 4.839121 TGAAGTTGGCCACGTATTAGATT 58.161 39.130 3.88 0.00 0.00 2.40
4306 5258 4.481368 TGAAGTTGGCCACGTATTAGAT 57.519 40.909 3.88 0.00 0.00 1.98
4307 5259 3.965379 TGAAGTTGGCCACGTATTAGA 57.035 42.857 3.88 0.00 0.00 2.10
4308 5260 5.331902 CATTTGAAGTTGGCCACGTATTAG 58.668 41.667 3.88 0.00 0.00 1.73
4309 5261 4.380023 GCATTTGAAGTTGGCCACGTATTA 60.380 41.667 3.88 0.00 0.00 0.98
4310 5262 3.613910 GCATTTGAAGTTGGCCACGTATT 60.614 43.478 3.88 0.00 0.00 1.89
4311 5263 2.094752 GCATTTGAAGTTGGCCACGTAT 60.095 45.455 3.88 0.00 0.00 3.06
4312 5264 1.268352 GCATTTGAAGTTGGCCACGTA 59.732 47.619 3.88 0.00 0.00 3.57
4313 5265 0.031994 GCATTTGAAGTTGGCCACGT 59.968 50.000 3.88 0.00 0.00 4.49
4314 5266 0.031857 TGCATTTGAAGTTGGCCACG 59.968 50.000 3.88 0.00 0.00 4.94
4315 5267 2.137523 CTTGCATTTGAAGTTGGCCAC 58.862 47.619 3.88 0.00 0.00 5.01
4316 5268 1.761784 ACTTGCATTTGAAGTTGGCCA 59.238 42.857 0.00 0.00 28.94 5.36
4317 5269 2.531522 ACTTGCATTTGAAGTTGGCC 57.468 45.000 0.00 0.00 28.94 5.36
4318 5270 5.982465 TTAAACTTGCATTTGAAGTTGGC 57.018 34.783 1.61 0.00 41.71 4.52
4319 5271 7.951530 AGATTAAACTTGCATTTGAAGTTGG 57.048 32.000 1.61 0.00 41.71 3.77
4325 5277 9.734620 GCATGTATAGATTAAACTTGCATTTGA 57.265 29.630 9.16 0.00 41.41 2.69
4326 5278 9.518906 TGCATGTATAGATTAAACTTGCATTTG 57.481 29.630 11.60 0.00 44.43 2.32
4330 5282 9.734620 GATTTGCATGTATAGATTAAACTTGCA 57.265 29.630 11.60 11.60 46.29 4.08
4331 5283 9.956720 AGATTTGCATGTATAGATTAAACTTGC 57.043 29.630 7.72 7.72 41.85 4.01
4340 5292 9.703892 GTCTGAGTTAGATTTGCATGTATAGAT 57.296 33.333 0.00 0.00 37.83 1.98
4341 5293 8.918116 AGTCTGAGTTAGATTTGCATGTATAGA 58.082 33.333 0.00 0.00 37.83 1.98
4345 5297 9.317936 CATTAGTCTGAGTTAGATTTGCATGTA 57.682 33.333 0.00 0.00 37.83 2.29
4346 5298 7.826252 ACATTAGTCTGAGTTAGATTTGCATGT 59.174 33.333 0.00 0.00 37.83 3.21
4347 5299 8.206325 ACATTAGTCTGAGTTAGATTTGCATG 57.794 34.615 0.00 0.00 37.83 4.06
4348 5300 8.671921 CAACATTAGTCTGAGTTAGATTTGCAT 58.328 33.333 0.00 0.00 37.83 3.96
4349 5301 7.661437 ACAACATTAGTCTGAGTTAGATTTGCA 59.339 33.333 0.00 0.00 37.83 4.08
4350 5302 8.034058 ACAACATTAGTCTGAGTTAGATTTGC 57.966 34.615 0.00 0.00 37.83 3.68
4354 5306 9.778741 TGAAAACAACATTAGTCTGAGTTAGAT 57.221 29.630 0.00 0.00 37.83 1.98
4355 5307 9.261180 CTGAAAACAACATTAGTCTGAGTTAGA 57.739 33.333 0.00 0.00 0.00 2.10
4356 5308 9.046296 ACTGAAAACAACATTAGTCTGAGTTAG 57.954 33.333 0.00 0.00 0.00 2.34
4357 5309 8.958119 ACTGAAAACAACATTAGTCTGAGTTA 57.042 30.769 0.00 0.00 0.00 2.24
4358 5310 7.865706 ACTGAAAACAACATTAGTCTGAGTT 57.134 32.000 0.00 0.00 0.00 3.01
4359 5311 8.421784 TCTACTGAAAACAACATTAGTCTGAGT 58.578 33.333 0.00 0.00 0.00 3.41
4360 5312 8.818141 TCTACTGAAAACAACATTAGTCTGAG 57.182 34.615 0.00 0.00 0.00 3.35
4361 5313 9.042008 GTTCTACTGAAAACAACATTAGTCTGA 57.958 33.333 0.00 0.00 33.52 3.27
4362 5314 9.046296 AGTTCTACTGAAAACAACATTAGTCTG 57.954 33.333 0.00 0.00 33.52 3.51
4369 5321 8.621286 CCAAAGTAGTTCTACTGAAAACAACAT 58.379 33.333 12.40 0.00 33.52 2.71
4370 5322 7.608761 ACCAAAGTAGTTCTACTGAAAACAACA 59.391 33.333 12.40 0.00 33.52 3.33
4371 5323 7.908601 CACCAAAGTAGTTCTACTGAAAACAAC 59.091 37.037 12.40 0.00 33.52 3.32
4372 5324 7.608761 ACACCAAAGTAGTTCTACTGAAAACAA 59.391 33.333 12.40 0.00 33.52 2.83
4373 5325 7.107542 ACACCAAAGTAGTTCTACTGAAAACA 58.892 34.615 12.40 0.00 33.52 2.83
4374 5326 7.549615 ACACCAAAGTAGTTCTACTGAAAAC 57.450 36.000 12.40 0.00 33.52 2.43
4375 5327 9.841295 ATAACACCAAAGTAGTTCTACTGAAAA 57.159 29.630 12.40 0.00 33.52 2.29
4376 5328 9.841295 AATAACACCAAAGTAGTTCTACTGAAA 57.159 29.630 12.40 0.00 33.52 2.69
4377 5329 9.841295 AAATAACACCAAAGTAGTTCTACTGAA 57.159 29.630 12.40 0.00 0.00 3.02
4378 5330 9.841295 AAAATAACACCAAAGTAGTTCTACTGA 57.159 29.630 12.40 0.00 0.00 3.41
4415 5367 9.626045 GTTTCGTCCAATTCTGAGAAATTTTAT 57.374 29.630 0.00 0.00 31.57 1.40
4416 5368 8.846211 AGTTTCGTCCAATTCTGAGAAATTTTA 58.154 29.630 0.00 0.00 31.57 1.52
4417 5369 7.716612 AGTTTCGTCCAATTCTGAGAAATTTT 58.283 30.769 0.00 0.00 31.57 1.82
4418 5370 7.277174 AGTTTCGTCCAATTCTGAGAAATTT 57.723 32.000 0.00 0.00 31.57 1.82
4419 5371 6.884280 AGTTTCGTCCAATTCTGAGAAATT 57.116 33.333 0.00 0.00 31.57 1.82
4420 5372 6.884280 AAGTTTCGTCCAATTCTGAGAAAT 57.116 33.333 0.00 0.00 31.57 2.17
4421 5373 6.693315 AAAGTTTCGTCCAATTCTGAGAAA 57.307 33.333 0.00 0.00 0.00 2.52
4422 5374 6.073980 CGTAAAGTTTCGTCCAATTCTGAGAA 60.074 38.462 0.00 0.00 0.00 2.87
4423 5375 5.404366 CGTAAAGTTTCGTCCAATTCTGAGA 59.596 40.000 0.00 0.00 0.00 3.27
4424 5376 5.389516 CCGTAAAGTTTCGTCCAATTCTGAG 60.390 44.000 0.00 0.00 0.00 3.35
4425 5377 4.449743 CCGTAAAGTTTCGTCCAATTCTGA 59.550 41.667 0.00 0.00 0.00 3.27
4426 5378 4.449743 TCCGTAAAGTTTCGTCCAATTCTG 59.550 41.667 0.00 0.00 0.00 3.02
4427 5379 4.634199 TCCGTAAAGTTTCGTCCAATTCT 58.366 39.130 0.00 0.00 0.00 2.40
4428 5380 4.142966 CCTCCGTAAAGTTTCGTCCAATTC 60.143 45.833 0.00 0.00 0.00 2.17
4429 5381 3.749609 CCTCCGTAAAGTTTCGTCCAATT 59.250 43.478 0.00 0.00 0.00 2.32
4430 5382 3.244318 ACCTCCGTAAAGTTTCGTCCAAT 60.244 43.478 0.00 0.00 0.00 3.16
4431 5383 2.102925 ACCTCCGTAAAGTTTCGTCCAA 59.897 45.455 0.00 0.00 0.00 3.53
4432 5384 1.688197 ACCTCCGTAAAGTTTCGTCCA 59.312 47.619 0.00 0.00 0.00 4.02
4433 5385 2.445565 ACCTCCGTAAAGTTTCGTCC 57.554 50.000 0.00 0.00 0.00 4.79
4434 5386 4.801147 AAAACCTCCGTAAAGTTTCGTC 57.199 40.909 0.00 0.00 32.73 4.20
4471 5423 8.149973 TCGTACTTCTTTGCTCAAGTATTTTT 57.850 30.769 0.00 0.00 37.42 1.94
4472 5424 7.656137 TCTCGTACTTCTTTGCTCAAGTATTTT 59.344 33.333 0.00 0.00 37.42 1.82
4473 5425 7.152645 TCTCGTACTTCTTTGCTCAAGTATTT 58.847 34.615 0.00 0.00 37.42 1.40
4474 5426 6.688578 TCTCGTACTTCTTTGCTCAAGTATT 58.311 36.000 0.00 0.00 37.42 1.89
4475 5427 6.268825 TCTCGTACTTCTTTGCTCAAGTAT 57.731 37.500 0.00 0.00 37.42 2.12
4476 5428 5.335740 CCTCTCGTACTTCTTTGCTCAAGTA 60.336 44.000 0.00 0.00 34.60 2.24
4477 5429 4.551388 CTCTCGTACTTCTTTGCTCAAGT 58.449 43.478 0.00 0.00 36.75 3.16
4478 5430 3.923461 CCTCTCGTACTTCTTTGCTCAAG 59.077 47.826 0.00 0.00 0.00 3.02
4479 5431 3.306088 CCCTCTCGTACTTCTTTGCTCAA 60.306 47.826 0.00 0.00 0.00 3.02
4480 5432 2.231478 CCCTCTCGTACTTCTTTGCTCA 59.769 50.000 0.00 0.00 0.00 4.26
4481 5433 2.417515 CCCCTCTCGTACTTCTTTGCTC 60.418 54.545 0.00 0.00 0.00 4.26
4482 5434 1.550976 CCCCTCTCGTACTTCTTTGCT 59.449 52.381 0.00 0.00 0.00 3.91
4483 5435 1.405661 CCCCCTCTCGTACTTCTTTGC 60.406 57.143 0.00 0.00 0.00 3.68
4484 5436 2.674796 CCCCCTCTCGTACTTCTTTG 57.325 55.000 0.00 0.00 0.00 2.77
4505 5457 2.658422 GCTTGTTGCCCATGGTGG 59.342 61.111 11.73 0.00 37.25 4.61
4524 5476 4.954970 CACCAAGGCACGCCCTGT 62.955 66.667 3.95 0.00 45.62 4.00
4534 5486 0.468029 ACTCCAACAAGCCACCAAGG 60.468 55.000 0.00 0.00 41.84 3.61
4535 5487 1.067516 CAACTCCAACAAGCCACCAAG 59.932 52.381 0.00 0.00 0.00 3.61
4536 5488 1.110442 CAACTCCAACAAGCCACCAA 58.890 50.000 0.00 0.00 0.00 3.67
4537 5489 0.033601 ACAACTCCAACAAGCCACCA 60.034 50.000 0.00 0.00 0.00 4.17
4538 5490 1.111277 AACAACTCCAACAAGCCACC 58.889 50.000 0.00 0.00 0.00 4.61
4539 5491 1.802508 GCAACAACTCCAACAAGCCAC 60.803 52.381 0.00 0.00 0.00 5.01
4540 5492 0.459489 GCAACAACTCCAACAAGCCA 59.541 50.000 0.00 0.00 0.00 4.75
4541 5493 0.249447 GGCAACAACTCCAACAAGCC 60.249 55.000 0.00 0.00 0.00 4.35
4542 5494 0.746659 AGGCAACAACTCCAACAAGC 59.253 50.000 0.00 0.00 41.41 4.01
4543 5495 2.781945 GAGGCAACAACTCCAACAAG 57.218 50.000 0.00 0.00 41.41 3.16
4550 5502 3.059352 AGTATGTGGAGGCAACAACTC 57.941 47.619 0.00 0.00 41.41 3.01
4551 5503 3.412386 GAAGTATGTGGAGGCAACAACT 58.588 45.455 0.00 0.00 41.41 3.16
4552 5504 2.488153 GGAAGTATGTGGAGGCAACAAC 59.512 50.000 0.00 0.00 41.41 3.32
4553 5505 2.790433 GGAAGTATGTGGAGGCAACAA 58.210 47.619 0.00 0.00 41.41 2.83
4554 5506 1.338674 CGGAAGTATGTGGAGGCAACA 60.339 52.381 0.00 0.00 41.41 3.33
4555 5507 1.369625 CGGAAGTATGTGGAGGCAAC 58.630 55.000 0.00 0.00 0.00 4.17
4556 5508 0.251916 CCGGAAGTATGTGGAGGCAA 59.748 55.000 0.00 0.00 0.00 4.52
4557 5509 0.907704 ACCGGAAGTATGTGGAGGCA 60.908 55.000 9.46 0.00 0.00 4.75
4558 5510 0.252197 AACCGGAAGTATGTGGAGGC 59.748 55.000 9.46 0.00 0.00 4.70
4559 5511 1.553248 TCAACCGGAAGTATGTGGAGG 59.447 52.381 9.46 0.00 0.00 4.30
4560 5512 2.618053 GTCAACCGGAAGTATGTGGAG 58.382 52.381 9.46 0.00 0.00 3.86
4561 5513 1.276989 GGTCAACCGGAAGTATGTGGA 59.723 52.381 9.46 0.00 0.00 4.02
4562 5514 1.278127 AGGTCAACCGGAAGTATGTGG 59.722 52.381 9.46 0.00 42.08 4.17
4563 5515 2.762535 AGGTCAACCGGAAGTATGTG 57.237 50.000 9.46 0.00 42.08 3.21
4564 5516 5.189145 AGAATTAGGTCAACCGGAAGTATGT 59.811 40.000 9.46 0.00 42.08 2.29
4565 5517 5.671493 AGAATTAGGTCAACCGGAAGTATG 58.329 41.667 9.46 0.00 42.08 2.39
4566 5518 5.952347 AGAATTAGGTCAACCGGAAGTAT 57.048 39.130 9.46 0.00 42.08 2.12
4567 5519 6.628844 GCTTAGAATTAGGTCAACCGGAAGTA 60.629 42.308 9.46 0.00 42.08 2.24
4568 5520 5.731591 CTTAGAATTAGGTCAACCGGAAGT 58.268 41.667 9.46 0.00 42.08 3.01
4569 5521 4.571176 GCTTAGAATTAGGTCAACCGGAAG 59.429 45.833 9.46 0.00 42.08 3.46
4570 5522 4.510571 GCTTAGAATTAGGTCAACCGGAA 58.489 43.478 9.46 0.00 42.08 4.30
4571 5523 3.118519 GGCTTAGAATTAGGTCAACCGGA 60.119 47.826 9.46 0.00 42.08 5.14
4572 5524 3.118371 AGGCTTAGAATTAGGTCAACCGG 60.118 47.826 0.00 0.00 42.08 5.28
4573 5525 4.138487 AGGCTTAGAATTAGGTCAACCG 57.862 45.455 0.00 0.00 42.08 4.44
4574 5526 8.430431 ACTTATAGGCTTAGAATTAGGTCAACC 58.570 37.037 0.00 0.00 0.00 3.77
4575 5527 9.833917 AACTTATAGGCTTAGAATTAGGTCAAC 57.166 33.333 0.00 0.00 0.00 3.18
4578 5530 9.194271 CGAAACTTATAGGCTTAGAATTAGGTC 57.806 37.037 0.00 0.00 0.00 3.85
4579 5531 8.702819 ACGAAACTTATAGGCTTAGAATTAGGT 58.297 33.333 0.00 0.00 0.00 3.08
4580 5532 9.194271 GACGAAACTTATAGGCTTAGAATTAGG 57.806 37.037 0.00 0.00 0.00 2.69
4581 5533 9.968870 AGACGAAACTTATAGGCTTAGAATTAG 57.031 33.333 0.00 0.00 0.00 1.73
4583 5535 9.315525 GAAGACGAAACTTATAGGCTTAGAATT 57.684 33.333 0.00 0.00 0.00 2.17
4584 5536 7.927092 GGAAGACGAAACTTATAGGCTTAGAAT 59.073 37.037 0.00 0.00 0.00 2.40
4585 5537 7.263496 GGAAGACGAAACTTATAGGCTTAGAA 58.737 38.462 0.00 0.00 0.00 2.10
4586 5538 6.183360 GGGAAGACGAAACTTATAGGCTTAGA 60.183 42.308 0.00 0.00 0.00 2.10
4587 5539 5.984323 GGGAAGACGAAACTTATAGGCTTAG 59.016 44.000 0.00 0.00 0.00 2.18
4588 5540 5.422970 TGGGAAGACGAAACTTATAGGCTTA 59.577 40.000 0.00 0.00 0.00 3.09
4589 5541 4.224370 TGGGAAGACGAAACTTATAGGCTT 59.776 41.667 0.00 0.00 0.00 4.35
4590 5542 3.773119 TGGGAAGACGAAACTTATAGGCT 59.227 43.478 0.00 0.00 0.00 4.58
4591 5543 4.133013 TGGGAAGACGAAACTTATAGGC 57.867 45.455 0.00 0.00 0.00 3.93
4592 5544 5.974108 TCTTGGGAAGACGAAACTTATAGG 58.026 41.667 0.00 0.00 31.20 2.57
4593 5545 7.900782 TTTCTTGGGAAGACGAAACTTATAG 57.099 36.000 0.00 0.00 37.23 1.31
4594 5546 8.680039 TTTTTCTTGGGAAGACGAAACTTATA 57.320 30.769 0.00 0.00 37.23 0.98
4595 5547 7.501225 TCTTTTTCTTGGGAAGACGAAACTTAT 59.499 33.333 0.00 0.00 37.23 1.73
4596 5548 6.824704 TCTTTTTCTTGGGAAGACGAAACTTA 59.175 34.615 0.00 0.00 37.23 2.24
4597 5549 5.650703 TCTTTTTCTTGGGAAGACGAAACTT 59.349 36.000 0.00 0.00 37.23 2.66
4598 5550 5.190677 TCTTTTTCTTGGGAAGACGAAACT 58.809 37.500 0.00 0.00 37.23 2.66
4599 5551 5.494632 TCTTTTTCTTGGGAAGACGAAAC 57.505 39.130 0.00 0.00 37.23 2.78
4600 5552 6.320164 TGATTCTTTTTCTTGGGAAGACGAAA 59.680 34.615 0.00 0.00 37.23 3.46
4601 5553 5.825679 TGATTCTTTTTCTTGGGAAGACGAA 59.174 36.000 0.00 0.00 37.23 3.85
4602 5554 5.373222 TGATTCTTTTTCTTGGGAAGACGA 58.627 37.500 0.00 0.00 37.23 4.20
4603 5555 5.470098 TCTGATTCTTTTTCTTGGGAAGACG 59.530 40.000 0.00 0.00 37.23 4.18
4604 5556 6.712547 TCTCTGATTCTTTTTCTTGGGAAGAC 59.287 38.462 0.00 0.00 37.23 3.01
4605 5557 6.841601 TCTCTGATTCTTTTTCTTGGGAAGA 58.158 36.000 0.00 0.00 35.26 2.87
4606 5558 6.939163 TCTCTCTGATTCTTTTTCTTGGGAAG 59.061 38.462 0.00 0.00 32.61 3.46
4607 5559 6.841601 TCTCTCTGATTCTTTTTCTTGGGAA 58.158 36.000 0.00 0.00 0.00 3.97
4608 5560 6.439636 TCTCTCTGATTCTTTTTCTTGGGA 57.560 37.500 0.00 0.00 0.00 4.37
4609 5561 7.230309 ACTTTCTCTCTGATTCTTTTTCTTGGG 59.770 37.037 0.00 0.00 0.00 4.12
4610 5562 8.164058 ACTTTCTCTCTGATTCTTTTTCTTGG 57.836 34.615 0.00 0.00 0.00 3.61
4613 5565 8.555361 CGAAACTTTCTCTCTGATTCTTTTTCT 58.445 33.333 0.12 0.00 0.00 2.52
4614 5566 8.338986 ACGAAACTTTCTCTCTGATTCTTTTTC 58.661 33.333 0.00 0.00 0.00 2.29
4615 5567 8.214721 ACGAAACTTTCTCTCTGATTCTTTTT 57.785 30.769 0.00 0.00 0.00 1.94
4616 5568 7.306866 CGACGAAACTTTCTCTCTGATTCTTTT 60.307 37.037 0.00 0.00 0.00 2.27
4617 5569 6.144724 CGACGAAACTTTCTCTCTGATTCTTT 59.855 38.462 0.00 0.00 0.00 2.52
4618 5570 5.631512 CGACGAAACTTTCTCTCTGATTCTT 59.368 40.000 0.00 0.00 0.00 2.52
4619 5571 5.157781 CGACGAAACTTTCTCTCTGATTCT 58.842 41.667 0.00 0.00 0.00 2.40
4620 5572 4.201542 GCGACGAAACTTTCTCTCTGATTC 60.202 45.833 0.00 0.00 0.00 2.52
4621 5573 3.675698 GCGACGAAACTTTCTCTCTGATT 59.324 43.478 0.00 0.00 0.00 2.57
4622 5574 3.246619 GCGACGAAACTTTCTCTCTGAT 58.753 45.455 0.00 0.00 0.00 2.90
4623 5575 2.662700 GCGACGAAACTTTCTCTCTGA 58.337 47.619 0.00 0.00 0.00 3.27
4624 5576 1.383744 CGCGACGAAACTTTCTCTCTG 59.616 52.381 0.00 0.00 0.00 3.35
4625 5577 1.001597 ACGCGACGAAACTTTCTCTCT 60.002 47.619 15.93 0.00 0.00 3.10
4626 5578 1.406447 ACGCGACGAAACTTTCTCTC 58.594 50.000 15.93 0.00 0.00 3.20
4627 5579 1.849097 AACGCGACGAAACTTTCTCT 58.151 45.000 15.93 0.00 0.00 3.10
4628 5580 2.640375 AAACGCGACGAAACTTTCTC 57.360 45.000 15.93 0.00 0.00 2.87
4629 5581 3.600011 CGTAAAACGCGACGAAACTTTCT 60.600 43.478 15.93 0.00 41.60 2.52
4630 5582 2.637858 CGTAAAACGCGACGAAACTTTC 59.362 45.455 15.93 0.00 41.60 2.62
4631 5583 2.281234 TCGTAAAACGCGACGAAACTTT 59.719 40.909 15.93 0.00 44.56 2.66
4632 5584 1.851666 TCGTAAAACGCGACGAAACTT 59.148 42.857 15.93 0.00 44.56 2.66
4633 5585 1.476074 TCGTAAAACGCGACGAAACT 58.524 45.000 15.93 0.00 44.56 2.66
4634 5586 3.975660 TCGTAAAACGCGACGAAAC 57.024 47.368 15.93 3.04 44.56 2.78
4638 5590 2.110990 TCCATATCGTAAAACGCGACG 58.889 47.619 15.93 13.16 42.21 5.12
4639 5591 2.097541 GCTCCATATCGTAAAACGCGAC 60.098 50.000 15.93 0.00 42.21 5.19
4640 5592 2.121786 GCTCCATATCGTAAAACGCGA 58.878 47.619 15.93 0.00 42.21 5.87
4641 5593 1.191647 GGCTCCATATCGTAAAACGCG 59.808 52.381 3.53 3.53 42.21 6.01
4642 5594 2.033151 GTGGCTCCATATCGTAAAACGC 60.033 50.000 0.00 0.00 42.21 4.84
4643 5595 2.542595 GGTGGCTCCATATCGTAAAACG 59.457 50.000 0.00 0.00 38.43 3.60
4644 5596 3.805207 AGGTGGCTCCATATCGTAAAAC 58.195 45.455 8.51 0.00 39.02 2.43
4645 5597 3.181458 GGAGGTGGCTCCATATCGTAAAA 60.181 47.826 8.51 0.00 42.86 1.52
4646 5598 2.367567 GGAGGTGGCTCCATATCGTAAA 59.632 50.000 8.51 0.00 42.86 2.01
4647 5599 1.968493 GGAGGTGGCTCCATATCGTAA 59.032 52.381 8.51 0.00 42.86 3.18
4648 5600 1.147191 AGGAGGTGGCTCCATATCGTA 59.853 52.381 8.51 0.00 45.66 3.43
4649 5601 0.105453 AGGAGGTGGCTCCATATCGT 60.105 55.000 8.51 0.00 45.66 3.73
4650 5602 0.319728 CAGGAGGTGGCTCCATATCG 59.680 60.000 8.51 0.00 45.66 2.92
4651 5603 1.428869 ACAGGAGGTGGCTCCATATC 58.571 55.000 8.51 0.00 45.66 1.63
4652 5604 1.771255 GAACAGGAGGTGGCTCCATAT 59.229 52.381 8.51 0.00 45.66 1.78
4653 5605 1.204146 GAACAGGAGGTGGCTCCATA 58.796 55.000 8.51 0.00 45.66 2.74
4654 5606 0.548682 AGAACAGGAGGTGGCTCCAT 60.549 55.000 8.51 0.00 45.66 3.41
4655 5607 0.768221 AAGAACAGGAGGTGGCTCCA 60.768 55.000 8.51 0.00 45.66 3.86
4656 5608 0.035915 GAAGAACAGGAGGTGGCTCC 60.036 60.000 0.00 0.00 43.65 4.70
4657 5609 0.687354 TGAAGAACAGGAGGTGGCTC 59.313 55.000 0.00 0.00 0.00 4.70
4658 5610 1.280421 GATGAAGAACAGGAGGTGGCT 59.720 52.381 0.00 0.00 0.00 4.75
4659 5611 1.003580 TGATGAAGAACAGGAGGTGGC 59.996 52.381 0.00 0.00 0.00 5.01
4660 5612 2.568956 TCTGATGAAGAACAGGAGGTGG 59.431 50.000 0.00 0.00 35.20 4.61
4661 5613 3.969287 TCTGATGAAGAACAGGAGGTG 57.031 47.619 0.00 0.00 35.20 4.00



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.