Multiple sequence alignment - TraesCS1B01G233500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G233500 chr1B 100.000 4742 0 0 1 4742 419200194 419204935 0.000000e+00 8757.0
1 TraesCS1B01G233500 chr1B 94.000 100 6 0 53 152 12731330 12731429 8.220000e-33 152.0
2 TraesCS1B01G233500 chr1D 94.200 2362 94 15 661 2998 309565163 309567505 0.000000e+00 3563.0
3 TraesCS1B01G233500 chr1D 91.263 1671 119 14 2955 4611 309567554 309569211 0.000000e+00 2252.0
4 TraesCS1B01G233500 chr1D 90.909 66 2 3 4681 4742 406665073 406665008 8.460000e-13 86.1
5 TraesCS1B01G233500 chr1D 91.803 61 3 2 4683 4742 29891904 29891845 3.040000e-12 84.2
6 TraesCS1B01G233500 chr1D 91.803 61 2 2 4685 4742 59868033 59867973 1.090000e-11 82.4
7 TraesCS1B01G233500 chr1A 92.567 2314 94 20 680 2956 389061253 389063525 0.000000e+00 3249.0
8 TraesCS1B01G233500 chr1A 95.032 946 38 3 2955 3893 389063589 389064532 0.000000e+00 1478.0
9 TraesCS1B01G233500 chr1A 82.656 738 79 25 3891 4611 389064613 389065318 4.060000e-170 608.0
10 TraesCS1B01G233500 chr1A 89.604 202 16 3 463 660 497234744 497234944 7.880000e-63 252.0
11 TraesCS1B01G233500 chr1A 88.670 203 18 3 463 661 554535715 554535514 4.740000e-60 243.0
12 TraesCS1B01G233500 chr1A 88.670 203 15 4 455 653 508627238 508627436 1.710000e-59 241.0
13 TraesCS1B01G233500 chr1A 87.437 199 21 4 463 660 186751656 186751461 4.770000e-55 226.0
14 TraesCS1B01G233500 chr1A 88.732 71 5 1 150 217 435393304 435393234 3.040000e-12 84.2
15 TraesCS1B01G233500 chr1A 94.340 53 3 0 4690 4742 53468841 53468789 1.090000e-11 82.4
16 TraesCS1B01G233500 chr1A 90.625 64 3 2 4682 4742 533694069 533694006 1.090000e-11 82.4
17 TraesCS1B01G233500 chr1A 93.750 48 3 0 151 198 186751707 186751660 6.580000e-09 73.1
18 TraesCS1B01G233500 chr3D 91.959 970 65 9 2007 2974 188627693 188626735 0.000000e+00 1347.0
19 TraesCS1B01G233500 chr3D 91.559 853 46 7 1075 1909 188628540 188627696 0.000000e+00 1153.0
20 TraesCS1B01G233500 chr3D 94.205 673 33 3 1649 2319 73325952 73325284 0.000000e+00 1022.0
21 TraesCS1B01G233500 chr3D 95.276 127 6 0 1075 1201 73326144 73326018 8.050000e-48 202.0
22 TraesCS1B01G233500 chr3D 96.154 52 2 0 2904 2955 188626717 188626666 8.460000e-13 86.1
23 TraesCS1B01G233500 chr7D 89.113 248 23 2 195 440 447057992 447058237 5.960000e-79 305.0
24 TraesCS1B01G233500 chr7D 95.000 100 5 0 53 152 529978190 529978091 1.770000e-34 158.0
25 TraesCS1B01G233500 chr5D 88.889 243 24 2 195 434 33663343 33663585 3.590000e-76 296.0
26 TraesCS1B01G233500 chr5D 87.649 251 26 4 188 435 482869427 482869179 2.160000e-73 287.0
27 TraesCS1B01G233500 chr5D 88.350 206 18 4 460 661 482909471 482909268 4.740000e-60 243.0
28 TraesCS1B01G233500 chr5D 88.670 203 18 3 463 660 527904474 527904676 4.740000e-60 243.0
29 TraesCS1B01G233500 chr5D 91.525 59 3 2 4686 4742 3247809 3247751 3.930000e-11 80.5
30 TraesCS1B01G233500 chr5D 91.525 59 2 2 4687 4742 128577675 128577617 1.410000e-10 78.7
31 TraesCS1B01G233500 chr5D 88.060 67 6 2 134 198 487415960 487416026 1.410000e-10 78.7
32 TraesCS1B01G233500 chr5D 91.228 57 4 1 4686 4742 435886195 435886140 5.090000e-10 76.8
33 TraesCS1B01G233500 chr5D 91.837 49 4 0 150 198 482909522 482909474 8.520000e-08 69.4
34 TraesCS1B01G233500 chr2B 88.843 242 24 2 195 433 101976714 101976955 1.290000e-75 294.0
35 TraesCS1B01G233500 chr2B 87.685 203 20 3 463 661 596089495 596089294 1.030000e-56 231.0
36 TraesCS1B01G233500 chr2B 98.113 53 1 0 4690 4742 313640749 313640801 5.050000e-15 93.5
37 TraesCS1B01G233500 chr4B 88.525 244 23 4 194 433 489644023 489644265 1.670000e-74 291.0
38 TraesCS1B01G233500 chr4B 93.269 104 6 1 49 152 574003736 574003838 8.220000e-33 152.0
39 TraesCS1B01G233500 chr4B 88.235 68 4 3 4678 4742 457410759 457410693 1.410000e-10 78.7
40 TraesCS1B01G233500 chr3B 88.477 243 24 2 195 435 423813513 423813273 1.670000e-74 291.0
41 TraesCS1B01G233500 chr3B 94.000 100 6 0 53 152 156874339 156874240 8.220000e-33 152.0
42 TraesCS1B01G233500 chr3B 93.137 102 7 0 51 152 507849165 507849064 2.960000e-32 150.0
43 TraesCS1B01G233500 chr3B 90.909 110 8 2 43 152 78656091 78655984 3.820000e-31 147.0
44 TraesCS1B01G233500 chr2D 88.066 243 26 2 193 432 10049026 10049268 7.770000e-73 285.0
45 TraesCS1B01G233500 chr2D 92.453 53 4 0 146 198 229053761 229053813 5.090000e-10 76.8
46 TraesCS1B01G233500 chr4A 86.885 244 29 3 195 435 124900657 124900900 2.170000e-68 270.0
47 TraesCS1B01G233500 chr4A 91.803 61 5 0 4682 4742 101406723 101406663 8.460000e-13 86.1
48 TraesCS1B01G233500 chr3A 86.585 246 30 2 193 435 744551710 744551465 7.820000e-68 268.0
49 TraesCS1B01G233500 chr3A 91.667 60 3 2 4684 4742 378815126 378815068 1.090000e-11 82.4
50 TraesCS1B01G233500 chr3A 93.878 49 3 0 150 198 516837679 516837727 1.830000e-09 75.0
51 TraesCS1B01G233500 chr5B 89.655 203 16 3 463 661 701596134 701596335 2.190000e-63 254.0
52 TraesCS1B01G233500 chr5B 95.000 100 5 0 53 152 45027572 45027473 1.770000e-34 158.0
53 TraesCS1B01G233500 chr5B 92.308 104 7 1 49 152 529543369 529543471 3.820000e-31 147.0
54 TraesCS1B01G233500 chr5B 98.039 51 0 1 4692 4742 554776741 554776692 2.350000e-13 87.9
55 TraesCS1B01G233500 chrUn 88.670 203 18 3 463 660 263460049 263459847 4.740000e-60 243.0
56 TraesCS1B01G233500 chrUn 90.323 62 2 3 4685 4742 3346392 3346453 1.410000e-10 78.7
57 TraesCS1B01G233500 chrUn 92.727 55 2 2 4690 4742 35125880 35125934 1.410000e-10 78.7
58 TraesCS1B01G233500 chrUn 97.778 45 1 0 4698 4742 37403315 37403271 1.410000e-10 78.7
59 TraesCS1B01G233500 chrUn 95.833 48 2 0 4695 4742 468291643 468291690 1.410000e-10 78.7
60 TraesCS1B01G233500 chrUn 94.231 52 2 1 4692 4742 471786109 471786160 1.410000e-10 78.7
61 TraesCS1B01G233500 chrUn 94.118 51 2 1 4692 4742 299168500 299168549 5.090000e-10 76.8
62 TraesCS1B01G233500 chrUn 93.750 48 3 0 4695 4742 16901633 16901680 6.580000e-09 73.1
63 TraesCS1B01G233500 chrUn 95.556 45 2 0 4698 4742 23744100 23744056 6.580000e-09 73.1
64 TraesCS1B01G233500 chrUn 90.909 55 3 2 4690 4742 35764476 35764422 6.580000e-09 73.1
65 TraesCS1B01G233500 chrUn 93.750 48 3 0 4694 4741 71536680 71536633 6.580000e-09 73.1
66 TraesCS1B01G233500 chrUn 90.909 55 3 2 4690 4742 309684556 309684610 6.580000e-09 73.1
67 TraesCS1B01G233500 chrUn 85.915 71 5 4 4677 4742 67407127 67407057 2.370000e-08 71.3
68 TraesCS1B01G233500 chr6B 89.474 114 11 1 40 152 624136238 624136125 4.950000e-30 143.0
69 TraesCS1B01G233500 chr6B 82.166 157 23 3 4464 4619 88328443 88328595 3.850000e-26 130.0
70 TraesCS1B01G233500 chr2A 93.548 62 3 1 4682 4742 654910232 654910293 1.820000e-14 91.6
71 TraesCS1B01G233500 chr5A 91.045 67 1 4 4681 4742 645994335 645994269 8.460000e-13 86.1
72 TraesCS1B01G233500 chr7B 90.769 65 3 3 4680 4742 84214280 84214217 3.040000e-12 84.2
73 TraesCS1B01G233500 chr6D 100.000 45 0 0 4698 4742 114156717 114156761 3.040000e-12 84.2
74 TraesCS1B01G233500 chr6D 100.000 45 0 0 4698 4742 380136991 380137035 3.040000e-12 84.2
75 TraesCS1B01G233500 chr6D 96.078 51 1 1 4692 4742 465044429 465044478 1.090000e-11 82.4
76 TraesCS1B01G233500 chr6D 90.323 62 3 2 4684 4742 427344945 427344884 1.410000e-10 78.7
77 TraesCS1B01G233500 chr6D 88.710 62 4 3 4684 4742 296699582 296699521 6.580000e-09 73.1
78 TraesCS1B01G233500 chr4D 100.000 45 0 0 4698 4742 379147205 379147249 3.040000e-12 84.2
79 TraesCS1B01G233500 chr4D 97.917 48 1 0 4695 4742 414221117 414221164 3.040000e-12 84.2
80 TraesCS1B01G233500 chr4D 97.917 48 1 0 4695 4742 493742362 493742409 3.040000e-12 84.2
81 TraesCS1B01G233500 chr4D 91.667 60 3 2 4684 4742 14609594 14609652 1.090000e-11 82.4
82 TraesCS1B01G233500 chr4D 96.078 51 1 1 4692 4742 398666184 398666233 1.090000e-11 82.4
83 TraesCS1B01G233500 chr4D 90.164 61 6 0 4682 4742 363923922 363923982 3.930000e-11 80.5
84 TraesCS1B01G233500 chr6A 92.857 56 4 0 4687 4742 19837610 19837555 1.090000e-11 82.4
85 TraesCS1B01G233500 chr6A 90.625 64 3 2 4682 4742 299830424 299830361 1.090000e-11 82.4
86 TraesCS1B01G233500 chr7A 89.796 49 5 0 150 198 730912469 730912421 3.960000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G233500 chr1B 419200194 419204935 4741 False 8757.000000 8757 100.0000 1 4742 1 chr1B.!!$F2 4741
1 TraesCS1B01G233500 chr1D 309565163 309569211 4048 False 2907.500000 3563 92.7315 661 4611 2 chr1D.!!$F1 3950
2 TraesCS1B01G233500 chr1A 389061253 389065318 4065 False 1778.333333 3249 90.0850 680 4611 3 chr1A.!!$F3 3931
3 TraesCS1B01G233500 chr3D 188626666 188628540 1874 True 862.033333 1347 93.2240 1075 2974 3 chr3D.!!$R2 1899
4 TraesCS1B01G233500 chr3D 73325284 73326144 860 True 612.000000 1022 94.7405 1075 2319 2 chr3D.!!$R1 1244

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
275 276 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.00 39.5 4.40 F
666 667 0.321671 TTGGCCAGCTATAGATCCGC 59.678 55.000 5.11 0.74 0.0 5.54 F
775 783 0.329261 CATTCCTGGCTCCAACTCCA 59.671 55.000 0.00 0.00 0.0 3.86 F
817 825 0.475906 GGTAGCGTACTCCTCCCCTA 59.524 60.000 0.00 0.00 0.0 3.53 F
1149 1168 0.907704 ACCTCGTATCCAAGTGCCCA 60.908 55.000 0.00 0.00 0.0 5.36 F
1942 1980 1.079825 TCCCCTCCTACTTTGGTGCTA 59.920 52.381 0.00 0.00 0.0 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1440 1478 1.135315 TGCTACGCTTGTAACTACCCG 60.135 52.381 0.00 0.00 0.00 5.28 R
2248 2288 1.409427 AGGCACTAGCACTACCGAATC 59.591 52.381 0.00 0.00 44.61 2.52 R
2389 2432 2.294233 ACATATGGCAAATCGGATGTGC 59.706 45.455 22.29 22.29 37.55 4.57 R
2480 2523 3.767673 ACAGAACTTAGTGGGCGATCTAA 59.232 43.478 0.00 0.00 0.00 2.10 R
2914 3072 1.271856 TAAGGAAGTCACGGATGCCA 58.728 50.000 0.00 0.00 0.00 4.92 R
3743 3991 0.751277 TGCATACCTTCAATGGGCGG 60.751 55.000 0.00 0.00 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.009115 AGCCCAAAAGATGTAAAAAGTACG 57.991 37.500 0.00 0.00 0.00 3.67
24 25 5.766174 AGCCCAAAAGATGTAAAAAGTACGA 59.234 36.000 0.00 0.00 0.00 3.43
25 26 6.433093 AGCCCAAAAGATGTAAAAAGTACGAT 59.567 34.615 0.00 0.00 0.00 3.73
26 27 6.526674 GCCCAAAAGATGTAAAAAGTACGATG 59.473 38.462 0.00 0.00 0.00 3.84
27 28 7.574217 GCCCAAAAGATGTAAAAAGTACGATGA 60.574 37.037 0.00 0.00 0.00 2.92
28 29 8.293867 CCCAAAAGATGTAAAAAGTACGATGAA 58.706 33.333 0.00 0.00 0.00 2.57
29 30 9.329913 CCAAAAGATGTAAAAAGTACGATGAAG 57.670 33.333 0.00 0.00 0.00 3.02
30 31 9.878599 CAAAAGATGTAAAAAGTACGATGAAGT 57.121 29.630 0.00 0.00 0.00 3.01
78 79 8.780846 TTTTTACATGGTAATACGTGTCTCAT 57.219 30.769 0.00 0.00 40.76 2.90
79 80 8.780846 TTTTACATGGTAATACGTGTCTCATT 57.219 30.769 0.00 0.00 40.76 2.57
80 81 8.780846 TTTACATGGTAATACGTGTCTCATTT 57.219 30.769 0.00 0.00 40.76 2.32
81 82 9.872721 TTTACATGGTAATACGTGTCTCATTTA 57.127 29.630 0.00 0.00 40.76 1.40
94 95 9.862371 ACGTGTCTCATTTATATCATAAGGATC 57.138 33.333 0.00 0.00 37.44 3.36
95 96 9.860898 CGTGTCTCATTTATATCATAAGGATCA 57.139 33.333 0.00 0.00 37.44 2.92
110 111 9.271921 TCATAAGGATCATAGTATAAGCCATGT 57.728 33.333 0.00 0.00 0.00 3.21
113 114 8.435931 AAGGATCATAGTATAAGCCATGTACA 57.564 34.615 0.00 0.00 0.00 2.90
114 115 8.435931 AGGATCATAGTATAAGCCATGTACAA 57.564 34.615 0.00 0.00 0.00 2.41
115 116 8.880244 AGGATCATAGTATAAGCCATGTACAAA 58.120 33.333 0.00 0.00 0.00 2.83
116 117 8.936864 GGATCATAGTATAAGCCATGTACAAAC 58.063 37.037 0.00 0.00 0.00 2.93
117 118 8.848474 ATCATAGTATAAGCCATGTACAAACC 57.152 34.615 0.00 0.00 0.00 3.27
118 119 6.926826 TCATAGTATAAGCCATGTACAAACCG 59.073 38.462 0.00 0.00 0.00 4.44
119 120 5.347620 AGTATAAGCCATGTACAAACCGA 57.652 39.130 0.00 0.00 0.00 4.69
120 121 5.114081 AGTATAAGCCATGTACAAACCGAC 58.886 41.667 0.00 0.00 0.00 4.79
121 122 1.530323 AAGCCATGTACAAACCGACC 58.470 50.000 0.00 0.00 0.00 4.79
122 123 0.690762 AGCCATGTACAAACCGACCT 59.309 50.000 0.00 0.00 0.00 3.85
123 124 0.802494 GCCATGTACAAACCGACCTG 59.198 55.000 0.00 0.00 0.00 4.00
124 125 1.609580 GCCATGTACAAACCGACCTGA 60.610 52.381 0.00 0.00 0.00 3.86
125 126 2.073816 CCATGTACAAACCGACCTGAC 58.926 52.381 0.00 0.00 0.00 3.51
126 127 2.549134 CCATGTACAAACCGACCTGACA 60.549 50.000 0.00 0.00 0.00 3.58
127 128 2.983907 TGTACAAACCGACCTGACAA 57.016 45.000 0.00 0.00 0.00 3.18
128 129 3.263489 TGTACAAACCGACCTGACAAA 57.737 42.857 0.00 0.00 0.00 2.83
129 130 3.607741 TGTACAAACCGACCTGACAAAA 58.392 40.909 0.00 0.00 0.00 2.44
130 131 3.374678 TGTACAAACCGACCTGACAAAAC 59.625 43.478 0.00 0.00 0.00 2.43
131 132 2.718563 ACAAACCGACCTGACAAAACT 58.281 42.857 0.00 0.00 0.00 2.66
132 133 2.422127 ACAAACCGACCTGACAAAACTG 59.578 45.455 0.00 0.00 0.00 3.16
133 134 2.680841 CAAACCGACCTGACAAAACTGA 59.319 45.455 0.00 0.00 0.00 3.41
134 135 2.702592 ACCGACCTGACAAAACTGAA 57.297 45.000 0.00 0.00 0.00 3.02
135 136 2.993937 ACCGACCTGACAAAACTGAAA 58.006 42.857 0.00 0.00 0.00 2.69
136 137 3.349022 ACCGACCTGACAAAACTGAAAA 58.651 40.909 0.00 0.00 0.00 2.29
137 138 3.377172 ACCGACCTGACAAAACTGAAAAG 59.623 43.478 0.00 0.00 0.00 2.27
138 139 3.625764 CCGACCTGACAAAACTGAAAAGA 59.374 43.478 0.00 0.00 0.00 2.52
139 140 4.495844 CCGACCTGACAAAACTGAAAAGAC 60.496 45.833 0.00 0.00 0.00 3.01
140 141 4.094294 CGACCTGACAAAACTGAAAAGACA 59.906 41.667 0.00 0.00 0.00 3.41
141 142 5.391523 CGACCTGACAAAACTGAAAAGACAA 60.392 40.000 0.00 0.00 0.00 3.18
142 143 5.709966 ACCTGACAAAACTGAAAAGACAAC 58.290 37.500 0.00 0.00 0.00 3.32
143 144 5.242838 ACCTGACAAAACTGAAAAGACAACA 59.757 36.000 0.00 0.00 0.00 3.33
144 145 6.155827 CCTGACAAAACTGAAAAGACAACAA 58.844 36.000 0.00 0.00 0.00 2.83
145 146 6.644592 CCTGACAAAACTGAAAAGACAACAAA 59.355 34.615 0.00 0.00 0.00 2.83
146 147 7.170658 CCTGACAAAACTGAAAAGACAACAAAA 59.829 33.333 0.00 0.00 0.00 2.44
147 148 7.846485 TGACAAAACTGAAAAGACAACAAAAC 58.154 30.769 0.00 0.00 0.00 2.43
148 149 6.872608 ACAAAACTGAAAAGACAACAAAACG 58.127 32.000 0.00 0.00 0.00 3.60
149 150 5.509605 AAACTGAAAAGACAACAAAACGC 57.490 34.783 0.00 0.00 0.00 4.84
150 151 4.434713 ACTGAAAAGACAACAAAACGCT 57.565 36.364 0.00 0.00 0.00 5.07
151 152 5.554822 ACTGAAAAGACAACAAAACGCTA 57.445 34.783 0.00 0.00 0.00 4.26
152 153 5.329493 ACTGAAAAGACAACAAAACGCTAC 58.671 37.500 0.00 0.00 0.00 3.58
153 154 5.106475 ACTGAAAAGACAACAAAACGCTACA 60.106 36.000 0.00 0.00 0.00 2.74
154 155 5.700846 TGAAAAGACAACAAAACGCTACAA 58.299 33.333 0.00 0.00 0.00 2.41
155 156 6.150318 TGAAAAGACAACAAAACGCTACAAA 58.850 32.000 0.00 0.00 0.00 2.83
156 157 6.641314 TGAAAAGACAACAAAACGCTACAAAA 59.359 30.769 0.00 0.00 0.00 2.44
157 158 6.626199 AAAGACAACAAAACGCTACAAAAG 57.374 33.333 0.00 0.00 0.00 2.27
158 159 5.305139 AGACAACAAAACGCTACAAAAGT 57.695 34.783 0.00 0.00 0.00 2.66
159 160 6.425577 AGACAACAAAACGCTACAAAAGTA 57.574 33.333 0.00 0.00 0.00 2.24
160 161 7.023197 AGACAACAAAACGCTACAAAAGTAT 57.977 32.000 0.00 0.00 0.00 2.12
161 162 6.910433 AGACAACAAAACGCTACAAAAGTATG 59.090 34.615 0.00 0.00 0.00 2.39
162 163 5.457473 ACAACAAAACGCTACAAAAGTATGC 59.543 36.000 0.00 0.00 0.00 3.14
163 164 5.176407 ACAAAACGCTACAAAAGTATGCA 57.824 34.783 0.00 0.00 0.00 3.96
164 165 5.768317 ACAAAACGCTACAAAAGTATGCAT 58.232 33.333 3.79 3.79 0.00 3.96
165 166 5.629020 ACAAAACGCTACAAAAGTATGCATG 59.371 36.000 10.16 0.00 0.00 4.06
166 167 3.405170 ACGCTACAAAAGTATGCATGC 57.595 42.857 11.82 11.82 0.00 4.06
167 168 2.746904 ACGCTACAAAAGTATGCATGCA 59.253 40.909 25.04 25.04 0.00 3.96
168 169 3.378112 ACGCTACAAAAGTATGCATGCAT 59.622 39.130 33.92 33.92 40.19 3.96
169 170 4.142403 ACGCTACAAAAGTATGCATGCATT 60.142 37.500 36.23 18.54 37.82 3.56
170 171 5.065859 ACGCTACAAAAGTATGCATGCATTA 59.934 36.000 36.23 19.80 37.82 1.90
171 172 5.396362 CGCTACAAAAGTATGCATGCATTAC 59.604 40.000 36.23 27.85 37.82 1.89
172 173 6.264832 GCTACAAAAGTATGCATGCATTACA 58.735 36.000 36.23 17.76 37.82 2.41
173 174 6.751425 GCTACAAAAGTATGCATGCATTACAA 59.249 34.615 36.23 17.38 37.82 2.41
174 175 7.275341 GCTACAAAAGTATGCATGCATTACAAA 59.725 33.333 36.23 16.98 37.82 2.83
175 176 7.959689 ACAAAAGTATGCATGCATTACAAAA 57.040 28.000 36.23 16.22 37.82 2.44
176 177 8.550710 ACAAAAGTATGCATGCATTACAAAAT 57.449 26.923 36.23 16.06 37.82 1.82
177 178 9.001542 ACAAAAGTATGCATGCATTACAAAATT 57.998 25.926 36.23 20.83 37.82 1.82
185 186 8.543862 TGCATGCATTACAAAATTATTGAACA 57.456 26.923 18.46 0.00 0.00 3.18
186 187 9.163899 TGCATGCATTACAAAATTATTGAACAT 57.836 25.926 18.46 0.00 0.00 2.71
203 204 7.598759 TTGAACATATTAGAGTACTCCCTCC 57.401 40.000 19.38 0.00 31.53 4.30
204 205 6.679542 TGAACATATTAGAGTACTCCCTCCA 58.320 40.000 19.38 1.96 31.53 3.86
205 206 7.306013 TGAACATATTAGAGTACTCCCTCCAT 58.694 38.462 19.38 7.10 31.53 3.41
206 207 7.789831 TGAACATATTAGAGTACTCCCTCCATT 59.210 37.037 19.38 6.39 31.53 3.16
207 208 7.784470 ACATATTAGAGTACTCCCTCCATTC 57.216 40.000 19.38 0.00 31.53 2.67
208 209 6.726764 ACATATTAGAGTACTCCCTCCATTCC 59.273 42.308 19.38 0.00 31.53 3.01
209 210 4.620086 TTAGAGTACTCCCTCCATTCCA 57.380 45.455 19.38 0.00 31.53 3.53
210 211 3.491766 AGAGTACTCCCTCCATTCCAA 57.508 47.619 19.38 0.00 31.53 3.53
211 212 3.803340 AGAGTACTCCCTCCATTCCAAA 58.197 45.455 19.38 0.00 31.53 3.28
212 213 4.175962 AGAGTACTCCCTCCATTCCAAAA 58.824 43.478 19.38 0.00 31.53 2.44
213 214 4.790790 AGAGTACTCCCTCCATTCCAAAAT 59.209 41.667 19.38 0.00 31.53 1.82
214 215 5.970640 AGAGTACTCCCTCCATTCCAAAATA 59.029 40.000 19.38 0.00 31.53 1.40
215 216 6.621514 AGAGTACTCCCTCCATTCCAAAATAT 59.378 38.462 19.38 0.00 31.53 1.28
216 217 7.794683 AGAGTACTCCCTCCATTCCAAAATATA 59.205 37.037 19.38 0.00 31.53 0.86
217 218 7.978925 AGTACTCCCTCCATTCCAAAATATAG 58.021 38.462 0.00 0.00 0.00 1.31
218 219 6.848562 ACTCCCTCCATTCCAAAATATAGT 57.151 37.500 0.00 0.00 0.00 2.12
219 220 6.605119 ACTCCCTCCATTCCAAAATATAGTG 58.395 40.000 0.00 0.00 0.00 2.74
220 221 5.385198 TCCCTCCATTCCAAAATATAGTGC 58.615 41.667 0.00 0.00 0.00 4.40
221 222 5.103728 TCCCTCCATTCCAAAATATAGTGCA 60.104 40.000 0.00 0.00 0.00 4.57
222 223 5.598005 CCCTCCATTCCAAAATATAGTGCAA 59.402 40.000 0.00 0.00 0.00 4.08
223 224 6.239120 CCCTCCATTCCAAAATATAGTGCAAG 60.239 42.308 0.00 0.00 0.00 4.01
224 225 6.147864 TCCATTCCAAAATATAGTGCAAGC 57.852 37.500 0.00 0.00 0.00 4.01
225 226 4.977963 CCATTCCAAAATATAGTGCAAGCG 59.022 41.667 0.00 0.00 0.00 4.68
226 227 3.691049 TCCAAAATATAGTGCAAGCGC 57.309 42.857 0.00 0.00 39.24 5.92
227 228 3.278574 TCCAAAATATAGTGCAAGCGCT 58.721 40.909 2.64 2.64 39.64 5.92
228 229 3.694072 TCCAAAATATAGTGCAAGCGCTT 59.306 39.130 18.98 18.98 39.64 4.68
229 230 4.037690 CCAAAATATAGTGCAAGCGCTTC 58.962 43.478 22.21 15.53 39.64 3.86
230 231 4.201950 CCAAAATATAGTGCAAGCGCTTCT 60.202 41.667 22.21 17.12 39.64 2.85
231 232 5.335127 CAAAATATAGTGCAAGCGCTTCTT 58.665 37.500 22.21 8.51 39.64 2.52
238 239 4.703703 AAGCGCTTCTTGAGGTCC 57.296 55.556 18.98 0.00 32.79 4.46
239 240 1.754745 AAGCGCTTCTTGAGGTCCA 59.245 52.632 18.98 0.00 32.79 4.02
240 241 0.108585 AAGCGCTTCTTGAGGTCCAA 59.891 50.000 18.98 0.00 32.79 3.53
241 242 0.603975 AGCGCTTCTTGAGGTCCAAC 60.604 55.000 2.64 0.00 0.00 3.77
242 243 0.603975 GCGCTTCTTGAGGTCCAACT 60.604 55.000 0.00 0.00 0.00 3.16
243 244 1.884235 CGCTTCTTGAGGTCCAACTT 58.116 50.000 0.00 0.00 0.00 2.66
244 245 2.222027 CGCTTCTTGAGGTCCAACTTT 58.778 47.619 0.00 0.00 0.00 2.66
245 246 3.399330 CGCTTCTTGAGGTCCAACTTTA 58.601 45.455 0.00 0.00 0.00 1.85
246 247 3.813166 CGCTTCTTGAGGTCCAACTTTAA 59.187 43.478 0.00 0.00 0.00 1.52
247 248 4.319549 CGCTTCTTGAGGTCCAACTTTAAC 60.320 45.833 0.00 0.00 0.00 2.01
248 249 4.023107 GCTTCTTGAGGTCCAACTTTAACC 60.023 45.833 0.00 0.00 0.00 2.85
249 250 4.781775 TCTTGAGGTCCAACTTTAACCA 57.218 40.909 0.00 0.00 35.43 3.67
250 251 5.319043 TCTTGAGGTCCAACTTTAACCAT 57.681 39.130 0.00 0.00 35.43 3.55
251 252 6.442541 TCTTGAGGTCCAACTTTAACCATA 57.557 37.500 0.00 0.00 35.43 2.74
252 253 6.843752 TCTTGAGGTCCAACTTTAACCATAA 58.156 36.000 0.00 0.00 35.43 1.90
253 254 7.291566 TCTTGAGGTCCAACTTTAACCATAAA 58.708 34.615 0.00 0.00 35.43 1.40
254 255 7.947890 TCTTGAGGTCCAACTTTAACCATAAAT 59.052 33.333 0.00 0.00 35.43 1.40
255 256 8.485578 TTGAGGTCCAACTTTAACCATAAATT 57.514 30.769 0.00 0.00 35.43 1.82
256 257 8.485578 TGAGGTCCAACTTTAACCATAAATTT 57.514 30.769 0.00 0.00 35.43 1.82
257 258 9.589461 TGAGGTCCAACTTTAACCATAAATTTA 57.411 29.630 0.00 0.00 35.43 1.40
260 261 9.426837 GGTCCAACTTTAACCATAAATTTAACC 57.573 33.333 1.21 0.00 30.46 2.85
261 262 9.984190 GTCCAACTTTAACCATAAATTTAACCA 57.016 29.630 1.21 0.00 30.88 3.67
266 267 9.902196 ACTTTAACCATAAATTTAACCAACGAG 57.098 29.630 1.21 0.01 30.88 4.18
268 269 9.896263 TTTAACCATAAATTTAACCAACGAGAC 57.104 29.630 1.21 0.00 0.00 3.36
269 270 6.505044 ACCATAAATTTAACCAACGAGACC 57.495 37.500 1.21 0.00 0.00 3.85
270 271 5.122711 ACCATAAATTTAACCAACGAGACCG 59.877 40.000 1.21 0.00 42.50 4.79
271 272 5.352016 CCATAAATTTAACCAACGAGACCGA 59.648 40.000 1.21 0.00 39.50 4.69
272 273 4.737353 AAATTTAACCAACGAGACCGAC 57.263 40.909 0.00 0.00 39.50 4.79
273 274 3.672767 ATTTAACCAACGAGACCGACT 57.327 42.857 0.00 0.00 39.50 4.18
274 275 2.427232 TTAACCAACGAGACCGACTG 57.573 50.000 0.00 0.00 39.50 3.51
275 276 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.00 39.50 4.40
276 277 2.805353 CCAACGAGACCGACTGCG 60.805 66.667 0.00 0.00 39.50 5.18
286 287 2.736995 CGACTGCGGCGGAAGAAA 60.737 61.111 17.15 0.00 0.00 2.52
287 288 2.314647 CGACTGCGGCGGAAGAAAA 61.315 57.895 17.15 0.00 0.00 2.29
288 289 1.837538 CGACTGCGGCGGAAGAAAAA 61.838 55.000 17.15 0.00 0.00 1.94
340 341 9.730420 ATACGAATTCACTGGTATAAATTTTGC 57.270 29.630 6.22 0.00 0.00 3.68
341 342 7.826690 ACGAATTCACTGGTATAAATTTTGCT 58.173 30.769 6.22 0.00 0.00 3.91
342 343 8.303876 ACGAATTCACTGGTATAAATTTTGCTT 58.696 29.630 6.22 0.00 0.00 3.91
343 344 8.798153 CGAATTCACTGGTATAAATTTTGCTTC 58.202 33.333 6.22 0.00 0.00 3.86
344 345 9.860898 GAATTCACTGGTATAAATTTTGCTTCT 57.139 29.630 0.00 0.00 0.00 2.85
345 346 9.643693 AATTCACTGGTATAAATTTTGCTTCTG 57.356 29.630 0.00 0.00 0.00 3.02
346 347 7.759489 TCACTGGTATAAATTTTGCTTCTGT 57.241 32.000 0.00 0.00 0.00 3.41
347 348 7.816640 TCACTGGTATAAATTTTGCTTCTGTC 58.183 34.615 0.00 0.00 0.00 3.51
348 349 6.742718 CACTGGTATAAATTTTGCTTCTGTCG 59.257 38.462 0.00 0.00 0.00 4.35
349 350 5.636837 TGGTATAAATTTTGCTTCTGTCGC 58.363 37.500 0.00 0.00 0.00 5.19
350 351 5.182190 TGGTATAAATTTTGCTTCTGTCGCA 59.818 36.000 0.00 0.00 35.22 5.10
351 352 5.739161 GGTATAAATTTTGCTTCTGTCGCAG 59.261 40.000 0.00 1.02 38.80 5.18
352 353 3.715628 AAATTTTGCTTCTGTCGCAGT 57.284 38.095 6.72 0.00 38.80 4.40
353 354 2.977405 ATTTTGCTTCTGTCGCAGTC 57.023 45.000 6.72 0.42 38.80 3.51
354 355 0.581529 TTTTGCTTCTGTCGCAGTCG 59.418 50.000 6.72 1.89 38.80 4.18
355 356 1.221466 TTTGCTTCTGTCGCAGTCGG 61.221 55.000 6.72 1.44 38.80 4.79
356 357 3.482783 GCTTCTGTCGCAGTCGGC 61.483 66.667 6.72 6.34 41.43 5.54
357 358 2.811317 CTTCTGTCGCAGTCGGCC 60.811 66.667 0.00 0.00 40.09 6.13
358 359 3.288308 CTTCTGTCGCAGTCGGCCT 62.288 63.158 0.00 0.00 40.09 5.19
359 360 2.771763 CTTCTGTCGCAGTCGGCCTT 62.772 60.000 0.00 0.00 40.09 4.35
360 361 3.114616 CTGTCGCAGTCGGCCTTG 61.115 66.667 0.00 0.00 40.09 3.61
361 362 3.865929 CTGTCGCAGTCGGCCTTGT 62.866 63.158 0.00 0.00 40.09 3.16
362 363 2.665185 GTCGCAGTCGGCCTTGTT 60.665 61.111 0.00 0.00 40.31 2.83
363 364 2.664851 TCGCAGTCGGCCTTGTTG 60.665 61.111 0.00 0.00 40.31 3.33
364 365 3.726517 CGCAGTCGGCCTTGTTGG 61.727 66.667 0.00 0.00 40.31 3.77
365 366 2.594592 GCAGTCGGCCTTGTTGGT 60.595 61.111 0.00 0.00 38.35 3.67
366 367 2.193536 GCAGTCGGCCTTGTTGGTT 61.194 57.895 0.00 0.00 38.35 3.67
367 368 0.887387 GCAGTCGGCCTTGTTGGTTA 60.887 55.000 0.00 0.00 38.35 2.85
368 369 1.600023 CAGTCGGCCTTGTTGGTTAA 58.400 50.000 0.00 0.00 38.35 2.01
369 370 1.950909 CAGTCGGCCTTGTTGGTTAAA 59.049 47.619 0.00 0.00 38.35 1.52
370 371 2.556622 CAGTCGGCCTTGTTGGTTAAAT 59.443 45.455 0.00 0.00 38.35 1.40
371 372 3.005367 CAGTCGGCCTTGTTGGTTAAATT 59.995 43.478 0.00 0.00 38.35 1.82
372 373 3.639561 AGTCGGCCTTGTTGGTTAAATTT 59.360 39.130 0.00 0.00 38.35 1.82
373 374 4.828387 AGTCGGCCTTGTTGGTTAAATTTA 59.172 37.500 0.00 0.00 38.35 1.40
374 375 5.479027 AGTCGGCCTTGTTGGTTAAATTTAT 59.521 36.000 0.00 0.00 38.35 1.40
375 376 5.575218 GTCGGCCTTGTTGGTTAAATTTATG 59.425 40.000 0.00 0.00 38.35 1.90
376 377 4.867608 CGGCCTTGTTGGTTAAATTTATGG 59.132 41.667 0.00 0.00 38.35 2.74
377 378 5.567823 CGGCCTTGTTGGTTAAATTTATGGT 60.568 40.000 0.00 0.00 38.35 3.55
378 379 5.872617 GGCCTTGTTGGTTAAATTTATGGTC 59.127 40.000 0.00 0.00 38.35 4.02
379 380 6.459923 GCCTTGTTGGTTAAATTTATGGTCA 58.540 36.000 0.00 0.00 38.35 4.02
380 381 6.931840 GCCTTGTTGGTTAAATTTATGGTCAA 59.068 34.615 0.00 0.00 38.35 3.18
381 382 7.442666 GCCTTGTTGGTTAAATTTATGGTCAAA 59.557 33.333 0.00 0.00 38.35 2.69
382 383 8.987890 CCTTGTTGGTTAAATTTATGGTCAAAG 58.012 33.333 0.00 1.10 0.00 2.77
383 384 9.541143 CTTGTTGGTTAAATTTATGGTCAAAGT 57.459 29.630 0.00 0.00 0.00 2.66
384 385 9.892130 TTGTTGGTTAAATTTATGGTCAAAGTT 57.108 25.926 0.00 0.00 31.36 2.66
385 386 9.319143 TGTTGGTTAAATTTATGGTCAAAGTTG 57.681 29.630 0.00 0.00 29.44 3.16
386 387 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
388 389 9.757227 TGGTTAAATTTATGGTCAAAGTTGAAG 57.243 29.630 0.00 0.00 39.21 3.02
389 390 8.708742 GGTTAAATTTATGGTCAAAGTTGAAGC 58.291 33.333 0.00 0.00 39.21 3.86
390 391 9.255304 GTTAAATTTATGGTCAAAGTTGAAGCA 57.745 29.630 0.00 0.00 39.21 3.91
391 392 7.713764 AAATTTATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
392 393 4.481930 TTATGGTCAAAGTTGAAGCACG 57.518 40.909 0.00 0.00 39.21 5.34
393 394 2.031258 TGGTCAAAGTTGAAGCACGA 57.969 45.000 0.00 0.00 39.21 4.35
394 395 2.360844 TGGTCAAAGTTGAAGCACGAA 58.639 42.857 0.00 0.00 39.21 3.85
395 396 2.750166 TGGTCAAAGTTGAAGCACGAAA 59.250 40.909 0.00 0.00 39.21 3.46
396 397 3.191581 TGGTCAAAGTTGAAGCACGAAAA 59.808 39.130 0.00 0.00 39.21 2.29
397 398 4.142271 TGGTCAAAGTTGAAGCACGAAAAT 60.142 37.500 0.00 0.00 39.21 1.82
398 399 5.066634 TGGTCAAAGTTGAAGCACGAAAATA 59.933 36.000 0.00 0.00 39.21 1.40
399 400 5.625311 GGTCAAAGTTGAAGCACGAAAATAG 59.375 40.000 0.00 0.00 39.21 1.73
400 401 6.427150 GTCAAAGTTGAAGCACGAAAATAGA 58.573 36.000 0.00 0.00 39.21 1.98
401 402 6.575201 GTCAAAGTTGAAGCACGAAAATAGAG 59.425 38.462 0.00 0.00 39.21 2.43
402 403 6.481976 TCAAAGTTGAAGCACGAAAATAGAGA 59.518 34.615 0.00 0.00 33.55 3.10
403 404 6.861065 AAGTTGAAGCACGAAAATAGAGAA 57.139 33.333 0.00 0.00 0.00 2.87
404 405 6.861065 AGTTGAAGCACGAAAATAGAGAAA 57.139 33.333 0.00 0.00 0.00 2.52
405 406 7.259290 AGTTGAAGCACGAAAATAGAGAAAA 57.741 32.000 0.00 0.00 0.00 2.29
406 407 7.132863 AGTTGAAGCACGAAAATAGAGAAAAC 58.867 34.615 0.00 0.00 0.00 2.43
407 408 6.612247 TGAAGCACGAAAATAGAGAAAACA 57.388 33.333 0.00 0.00 0.00 2.83
408 409 6.427150 TGAAGCACGAAAATAGAGAAAACAC 58.573 36.000 0.00 0.00 0.00 3.32
409 410 6.260050 TGAAGCACGAAAATAGAGAAAACACT 59.740 34.615 0.00 0.00 0.00 3.55
410 411 7.439955 TGAAGCACGAAAATAGAGAAAACACTA 59.560 33.333 0.00 0.00 0.00 2.74
411 412 7.907214 AGCACGAAAATAGAGAAAACACTAT 57.093 32.000 0.00 0.00 0.00 2.12
412 413 8.997621 AGCACGAAAATAGAGAAAACACTATA 57.002 30.769 0.00 0.00 0.00 1.31
413 414 9.601217 AGCACGAAAATAGAGAAAACACTATAT 57.399 29.630 0.00 0.00 0.00 0.86
423 424 8.040716 AGAGAAAACACTATATTTTGGAACGG 57.959 34.615 0.00 0.00 29.44 4.44
424 425 7.881232 AGAGAAAACACTATATTTTGGAACGGA 59.119 33.333 0.00 0.00 29.44 4.69
425 426 8.040716 AGAAAACACTATATTTTGGAACGGAG 57.959 34.615 0.00 0.00 29.44 4.63
426 427 6.753107 AAACACTATATTTTGGAACGGAGG 57.247 37.500 0.00 0.00 0.00 4.30
427 428 4.777463 ACACTATATTTTGGAACGGAGGG 58.223 43.478 0.00 0.00 0.00 4.30
428 429 4.472108 ACACTATATTTTGGAACGGAGGGA 59.528 41.667 0.00 0.00 0.00 4.20
429 430 5.057149 CACTATATTTTGGAACGGAGGGAG 58.943 45.833 0.00 0.00 0.00 4.30
430 431 4.720273 ACTATATTTTGGAACGGAGGGAGT 59.280 41.667 0.00 0.00 0.00 3.85
431 432 5.901276 ACTATATTTTGGAACGGAGGGAGTA 59.099 40.000 0.00 0.00 0.00 2.59
432 433 5.906772 ATATTTTGGAACGGAGGGAGTAT 57.093 39.130 0.00 0.00 0.00 2.12
433 434 4.586306 ATTTTGGAACGGAGGGAGTATT 57.414 40.909 0.00 0.00 0.00 1.89
434 435 5.703730 ATTTTGGAACGGAGGGAGTATTA 57.296 39.130 0.00 0.00 0.00 0.98
435 436 4.748277 TTTGGAACGGAGGGAGTATTAG 57.252 45.455 0.00 0.00 0.00 1.73
436 437 2.674420 TGGAACGGAGGGAGTATTAGG 58.326 52.381 0.00 0.00 0.00 2.69
437 438 2.023695 TGGAACGGAGGGAGTATTAGGT 60.024 50.000 0.00 0.00 0.00 3.08
438 439 3.205056 TGGAACGGAGGGAGTATTAGGTA 59.795 47.826 0.00 0.00 0.00 3.08
439 440 4.140853 TGGAACGGAGGGAGTATTAGGTAT 60.141 45.833 0.00 0.00 0.00 2.73
440 441 4.837298 GGAACGGAGGGAGTATTAGGTATT 59.163 45.833 0.00 0.00 0.00 1.89
441 442 5.306419 GGAACGGAGGGAGTATTAGGTATTT 59.694 44.000 0.00 0.00 0.00 1.40
442 443 6.494835 GGAACGGAGGGAGTATTAGGTATTTA 59.505 42.308 0.00 0.00 0.00 1.40
443 444 7.179872 GGAACGGAGGGAGTATTAGGTATTTAT 59.820 40.741 0.00 0.00 0.00 1.40
444 445 9.247861 GAACGGAGGGAGTATTAGGTATTTATA 57.752 37.037 0.00 0.00 0.00 0.98
445 446 9.779951 AACGGAGGGAGTATTAGGTATTTATAT 57.220 33.333 0.00 0.00 0.00 0.86
517 518 8.206516 TCAAAATAAAAATAAACGAGTCGTGC 57.793 30.769 20.68 0.00 39.99 5.34
518 519 7.324135 TCAAAATAAAAATAAACGAGTCGTGCC 59.676 33.333 20.68 0.00 39.99 5.01
519 520 2.867456 AAAATAAACGAGTCGTGCCG 57.133 45.000 20.68 0.00 39.99 5.69
520 521 1.787012 AAATAAACGAGTCGTGCCGT 58.213 45.000 20.68 7.75 39.99 5.68
521 522 1.065358 AATAAACGAGTCGTGCCGTG 58.935 50.000 20.68 0.00 39.99 4.94
522 523 1.349259 ATAAACGAGTCGTGCCGTGC 61.349 55.000 20.68 0.00 39.99 5.34
523 524 2.680693 TAAACGAGTCGTGCCGTGCA 62.681 55.000 20.68 0.00 39.99 4.57
568 569 3.463585 GGCATGGCCCATGGTGTG 61.464 66.667 24.64 0.93 44.06 3.82
569 570 4.151582 GCATGGCCCATGGTGTGC 62.152 66.667 24.64 8.23 41.64 4.57
570 571 3.463585 CATGGCCCATGGTGTGCC 61.464 66.667 20.36 20.36 45.56 5.01
604 605 4.404098 CCGTTTAGCCAGGGCCGT 62.404 66.667 6.70 0.00 43.17 5.68
605 606 3.124921 CGTTTAGCCAGGGCCGTG 61.125 66.667 18.72 18.72 43.17 4.94
606 607 3.440415 GTTTAGCCAGGGCCGTGC 61.440 66.667 20.20 14.79 43.17 5.34
618 619 4.118995 CCGTGCCGTGCCGTACTA 62.119 66.667 0.00 0.00 0.00 1.82
619 620 2.877582 CGTGCCGTGCCGTACTAC 60.878 66.667 0.00 0.00 0.00 2.73
620 621 2.507769 GTGCCGTGCCGTACTACC 60.508 66.667 0.00 0.00 0.00 3.18
621 622 4.118995 TGCCGTGCCGTACTACCG 62.119 66.667 0.00 0.00 0.00 4.02
646 647 4.388499 CCAGTTAGCACGGCCCGT 62.388 66.667 1.02 1.02 42.36 5.28
647 648 2.358247 CAGTTAGCACGGCCCGTT 60.358 61.111 5.76 0.00 38.32 4.44
648 649 1.964373 CAGTTAGCACGGCCCGTTT 60.964 57.895 5.76 0.00 38.32 3.60
649 650 1.964373 AGTTAGCACGGCCCGTTTG 60.964 57.895 5.76 0.00 38.32 2.93
650 651 2.670251 TTAGCACGGCCCGTTTGG 60.670 61.111 5.76 0.00 38.32 3.28
666 667 0.321671 TTGGCCAGCTATAGATCCGC 59.678 55.000 5.11 0.74 0.00 5.54
675 676 2.035321 GCTATAGATCCGCTATCCAGCC 59.965 54.545 3.21 0.00 45.64 4.85
743 751 2.776526 AGCCTGACCCACCCAACA 60.777 61.111 0.00 0.00 0.00 3.33
752 760 2.506957 CCACCCAACAAGGCAACCC 61.507 63.158 0.00 0.00 35.39 4.11
758 766 1.120795 CAACAAGGCAACCCCCACAT 61.121 55.000 0.00 0.00 37.17 3.21
762 770 1.739608 AAGGCAACCCCCACATTCCT 61.740 55.000 0.00 0.00 37.17 3.36
775 783 0.329261 CATTCCTGGCTCCAACTCCA 59.671 55.000 0.00 0.00 0.00 3.86
814 822 2.192187 CCGGTAGCGTACTCCTCCC 61.192 68.421 13.99 0.00 0.00 4.30
816 824 1.229643 GGTAGCGTACTCCTCCCCT 59.770 63.158 0.00 0.00 0.00 4.79
817 825 0.475906 GGTAGCGTACTCCTCCCCTA 59.524 60.000 0.00 0.00 0.00 3.53
821 829 2.108970 AGCGTACTCCTCCCCTAAAAG 58.891 52.381 0.00 0.00 0.00 2.27
913 921 2.331265 GCTGGAGGCAAACGAAACT 58.669 52.632 0.00 0.00 41.35 2.66
978 992 2.027625 CCGTCGACAGGAAGCAACC 61.028 63.158 17.16 0.00 0.00 3.77
982 1001 1.118965 TCGACAGGAAGCAACCAGGA 61.119 55.000 0.00 0.00 0.00 3.86
1149 1168 0.907704 ACCTCGTATCCAAGTGCCCA 60.908 55.000 0.00 0.00 0.00 5.36
1440 1478 5.547465 TCATTGTTATCCCCATGTATCGAC 58.453 41.667 0.00 0.00 0.00 4.20
1454 1492 2.573941 ATCGACGGGTAGTTACAAGC 57.426 50.000 0.00 0.00 0.00 4.01
1573 1611 1.809547 GTCCTGGCTTCAGAAAAGCTC 59.190 52.381 9.40 1.56 42.62 4.09
1617 1655 6.464222 TGTTCTTATTACAAGTGGACTCCTG 58.536 40.000 0.00 0.00 0.00 3.86
1629 1667 3.057245 GTGGACTCCTGAATTTGCTTTCC 60.057 47.826 0.00 0.00 0.00 3.13
1785 1823 3.047796 CAGTGTCAATGCTGCTTTGTTC 58.952 45.455 22.54 17.72 0.00 3.18
1942 1980 1.079825 TCCCCTCCTACTTTGGTGCTA 59.920 52.381 0.00 0.00 0.00 3.49
2010 2048 5.954153 ATGAAGACACAGGAGATCATTCT 57.046 39.130 0.00 0.00 33.88 2.40
2022 2060 3.378512 AGATCATTCTACAGTGAGGCCA 58.621 45.455 5.01 0.00 0.00 5.36
2023 2061 3.972638 AGATCATTCTACAGTGAGGCCAT 59.027 43.478 5.01 0.00 0.00 4.40
2024 2062 3.548745 TCATTCTACAGTGAGGCCATG 57.451 47.619 5.01 0.00 0.00 3.66
2068 2108 2.378038 AGCAAGGCTGACAAAGTTCAA 58.622 42.857 0.00 0.00 37.57 2.69
2100 2140 3.667960 CGATTCCTGTTTTGCCTTTCTCG 60.668 47.826 0.00 0.00 0.00 4.04
2216 2256 6.647067 GCATCACGTAAGCTCCTTTATCTTAT 59.353 38.462 0.00 0.00 45.62 1.73
2260 2300 6.979238 ACTCTTTTGTATAGATTCGGTAGTGC 59.021 38.462 0.00 0.00 0.00 4.40
2292 2332 7.442969 CCTAGTTGTTTGATTGGTGTGTAGTTA 59.557 37.037 0.00 0.00 0.00 2.24
2302 2342 8.809066 TGATTGGTGTGTAGTTATGTACTAGTT 58.191 33.333 0.00 0.00 39.98 2.24
2308 2348 7.699812 GTGTGTAGTTATGTACTAGTTGTAGCC 59.300 40.741 0.00 0.00 39.98 3.93
2383 2426 2.009774 GCGCAGTGAGTTATGGTTCAT 58.990 47.619 0.30 0.00 0.00 2.57
2389 2432 5.448225 GCAGTGAGTTATGGTTCATGTGATG 60.448 44.000 0.00 0.00 0.00 3.07
2409 2452 2.293955 TGCACATCCGATTTGCCATATG 59.706 45.455 15.30 0.00 35.26 1.78
2477 2520 6.767902 TGAAGGATTACCATAGTTCATTGCTC 59.232 38.462 0.00 0.00 38.94 4.26
2480 2523 7.293073 AGGATTACCATAGTTCATTGCTCAAT 58.707 34.615 0.00 0.00 38.94 2.57
2494 2537 2.698274 TGCTCAATTAGATCGCCCACTA 59.302 45.455 0.00 0.00 0.00 2.74
2524 2567 9.157104 TCTGTTTGCTTTGTCGTATCATTATTA 57.843 29.630 0.00 0.00 0.00 0.98
2894 2964 7.960738 GTCAAGTGAAATACGCAAATAGCTAAA 59.039 33.333 0.00 0.00 42.61 1.85
2914 3072 9.686683 AGCTAAATTATTCCACATCAGTAAGTT 57.313 29.630 0.00 0.00 0.00 2.66
2976 3224 2.578021 ACTTGGCCTCCAGTGTCATATT 59.422 45.455 3.32 0.00 33.81 1.28
3030 3278 4.491676 AGCGTGCTTTAGAAAATACTCGA 58.508 39.130 0.00 0.00 0.00 4.04
3083 3331 7.224949 GGTATAGTGTTCCAGAATTTCTGCTAC 59.775 40.741 19.04 17.38 42.98 3.58
3100 3348 4.265893 TGCTACCTTTCAATATTTCGGCA 58.734 39.130 0.00 0.00 0.00 5.69
3144 3392 1.621107 CGGTTCTGTTTCATGCATGC 58.379 50.000 22.25 11.82 0.00 4.06
3155 3403 4.625972 TTCATGCATGCTGTGTTATCTG 57.374 40.909 22.25 0.00 0.00 2.90
3228 3476 6.829811 TGTGAATCATGATAAGCCAATGAAGA 59.170 34.615 9.04 0.00 0.00 2.87
3271 3519 7.989416 TTCCTTAATAGTAGGTTTGTGGTTG 57.011 36.000 0.00 0.00 34.29 3.77
3307 3555 1.742268 GCCTTCAAATGGCTGTCTCTC 59.258 52.381 0.00 0.00 46.38 3.20
3311 3559 1.002430 TCAAATGGCTGTCTCTCGCTT 59.998 47.619 0.00 0.00 0.00 4.68
3375 3623 0.832983 ATTGGCATTGTGGTGGTGCT 60.833 50.000 0.00 0.00 38.83 4.40
3423 3671 3.366396 ACAGGTGACTATCGAAGACCAT 58.634 45.455 0.00 0.00 38.13 3.55
3453 3701 2.167398 TAGTGGGACAGCACGCTTCC 62.167 60.000 10.15 10.15 41.80 3.46
3598 3846 2.374504 CCATCCATGGTAGAAGGCAGAT 59.625 50.000 12.58 0.00 43.05 2.90
3600 3848 1.688735 TCCATGGTAGAAGGCAGATCG 59.311 52.381 12.58 0.00 0.00 3.69
3714 3962 8.884323 ACCATTGAGTATGATTACACTATGGAT 58.116 33.333 21.09 9.84 36.26 3.41
3743 3991 1.401905 GGGCAGTACAAGCACATAAGC 59.598 52.381 11.68 0.00 34.91 3.09
3797 4059 1.330213 CACATGACACGCACACTGAAA 59.670 47.619 0.00 0.00 0.00 2.69
3808 4070 4.811024 ACGCACACTGAAATCATATGGTAG 59.189 41.667 2.13 0.00 0.00 3.18
3905 4249 9.569122 AACTGTATAACTACATCAGGTTGTTTT 57.431 29.630 0.00 0.00 41.64 2.43
3957 4301 8.225107 TCAAAGCTGTATAACGTATGTTGTTTC 58.775 33.333 10.68 2.34 39.12 2.78
3962 4306 9.245962 GCTGTATAACGTATGTTGTTTCTAGAT 57.754 33.333 10.68 0.00 39.12 1.98
4029 4373 0.321996 GCTGAAACTCCCGAGAAGGT 59.678 55.000 0.00 0.00 38.74 3.50
4030 4374 1.941668 GCTGAAACTCCCGAGAAGGTG 60.942 57.143 0.00 0.00 38.74 4.00
4036 4380 1.228894 TCCCGAGAAGGTGAGCTGT 60.229 57.895 0.00 0.00 38.74 4.40
4041 4385 1.998315 CGAGAAGGTGAGCTGTTCATG 59.002 52.381 0.00 0.00 38.29 3.07
4105 4457 0.391395 TCCGTGTGTGTTGGTTCGTT 60.391 50.000 0.00 0.00 0.00 3.85
4155 4507 2.105006 TGCTCTGCAGGAAGATTGTC 57.895 50.000 15.13 0.00 33.32 3.18
4177 4529 2.233922 CTGATTGGTCCTCTTACGGTGT 59.766 50.000 0.00 0.00 0.00 4.16
4178 4530 2.028476 TGATTGGTCCTCTTACGGTGTG 60.028 50.000 0.00 0.00 0.00 3.82
4180 4532 0.470456 TGGTCCTCTTACGGTGTGGT 60.470 55.000 0.00 0.00 0.00 4.16
4192 4544 3.064416 TGTGGTGCCGCACTGATA 58.936 55.556 22.41 6.01 34.40 2.15
4193 4545 1.601703 TGTGGTGCCGCACTGATAT 59.398 52.632 22.41 0.00 34.40 1.63
4214 4566 2.159430 TGACATTTGTGATTCTTCGCCG 59.841 45.455 0.00 0.00 0.00 6.46
4230 4582 5.234329 TCTTCGCCGACAAATCTGAATTATC 59.766 40.000 0.00 0.00 0.00 1.75
4235 4587 6.456853 CGCCGACAAATCTGAATTATCTTGAA 60.457 38.462 0.00 0.00 0.00 2.69
4236 4588 7.420800 GCCGACAAATCTGAATTATCTTGAAT 58.579 34.615 0.00 0.00 0.00 2.57
4237 4589 7.589221 GCCGACAAATCTGAATTATCTTGAATC 59.411 37.037 0.00 0.00 0.00 2.52
4238 4590 8.834465 CCGACAAATCTGAATTATCTTGAATCT 58.166 33.333 0.00 0.00 0.00 2.40
4256 4608 9.102757 CTTGAATCTTGAAAATCGAAGGATAGA 57.897 33.333 0.00 0.00 31.01 1.98
4257 4609 9.618890 TTGAATCTTGAAAATCGAAGGATAGAT 57.381 29.630 0.00 0.00 31.01 1.98
4268 4620 9.640952 AAATCGAAGGATAGATAAAAATTCCCA 57.359 29.630 0.00 0.00 31.01 4.37
4291 4643 6.210796 CACACTGACATGACATTTGTGATTT 58.789 36.000 23.57 4.10 36.57 2.17
4303 4655 5.523188 ACATTTGTGATTTGTTTGCGTTCAT 59.477 32.000 0.00 0.00 0.00 2.57
4309 4661 6.526325 TGTGATTTGTTTGCGTTCATATTAGC 59.474 34.615 0.00 0.00 0.00 3.09
4312 4664 6.494893 TTTGTTTGCGTTCATATTAGCTCT 57.505 33.333 0.00 0.00 0.00 4.09
4316 4668 2.103094 TGCGTTCATATTAGCTCTGCCT 59.897 45.455 0.00 0.00 0.00 4.75
4332 4684 2.234661 CTGCCTGGTCTTCAGTCATACA 59.765 50.000 0.00 0.00 41.83 2.29
4341 4693 6.437477 TGGTCTTCAGTCATACACTCATACTT 59.563 38.462 0.00 0.00 30.26 2.24
4346 4698 5.480422 TCAGTCATACACTCATACTTGGTGT 59.520 40.000 0.00 0.00 44.75 4.16
4365 4717 4.868171 GGTGTTTTGAAAACCTGAAAGTCC 59.132 41.667 17.21 4.62 0.00 3.85
4366 4718 5.474825 GTGTTTTGAAAACCTGAAAGTCCA 58.525 37.500 17.21 0.00 0.00 4.02
4379 4731 2.124277 AAGTCCATTCGTTTAGGGCC 57.876 50.000 0.00 0.00 0.00 5.80
4387 4739 0.611714 TCGTTTAGGGCCTCTCCAAC 59.388 55.000 10.74 8.52 36.21 3.77
4396 4748 3.003173 CTCTCCAACGCCCCCTCA 61.003 66.667 0.00 0.00 0.00 3.86
4397 4749 2.528127 TCTCCAACGCCCCCTCAA 60.528 61.111 0.00 0.00 0.00 3.02
4400 4752 1.524008 CTCCAACGCCCCCTCAAAAC 61.524 60.000 0.00 0.00 0.00 2.43
4401 4753 1.530655 CCAACGCCCCCTCAAAACT 60.531 57.895 0.00 0.00 0.00 2.66
4410 4764 2.896685 CCCCCTCAAAACTTGCACATTA 59.103 45.455 0.00 0.00 0.00 1.90
4417 4771 6.146021 CCTCAAAACTTGCACATTATTTGTCC 59.854 38.462 0.00 0.00 36.00 4.02
4419 4773 3.216147 ACTTGCACATTATTTGTCCGC 57.784 42.857 0.00 0.00 36.00 5.54
4420 4774 2.819608 ACTTGCACATTATTTGTCCGCT 59.180 40.909 0.00 0.00 36.00 5.52
4434 4788 2.213499 GTCCGCTGACATGAATAAGGG 58.787 52.381 0.00 0.00 41.37 3.95
4438 4792 2.742856 CGCTGACATGAATAAGGGAGCA 60.743 50.000 0.00 0.00 0.00 4.26
4443 4797 2.846206 ACATGAATAAGGGAGCAGGTCA 59.154 45.455 0.00 0.00 0.00 4.02
4445 4799 4.660303 ACATGAATAAGGGAGCAGGTCATA 59.340 41.667 0.00 0.00 0.00 2.15
4453 4807 2.438021 GGGAGCAGGTCATACAACCATA 59.562 50.000 1.20 0.00 42.12 2.74
4470 4824 2.618045 CCATATCCCCTAAATGTCCGCC 60.618 54.545 0.00 0.00 0.00 6.13
4474 4828 0.033503 CCCCTAAATGTCCGCCCTTT 60.034 55.000 0.00 0.00 0.00 3.11
4498 4852 8.691661 TTTTTCCATCTTAAGTCTGCTTACTT 57.308 30.769 1.63 8.89 42.31 2.24
4499 4853 9.787435 TTTTTCCATCTTAAGTCTGCTTACTTA 57.213 29.630 1.63 7.21 40.20 2.24
4500 4854 9.787435 TTTTCCATCTTAAGTCTGCTTACTTAA 57.213 29.630 17.58 17.58 45.26 1.85
4501 4855 9.787435 TTTCCATCTTAAGTCTGCTTACTTAAA 57.213 29.630 18.54 12.80 46.15 1.52
4503 4857 9.436957 TCCATCTTAAGTCTGCTTACTTAAAAG 57.563 33.333 18.54 13.00 46.15 2.27
4504 4858 8.669243 CCATCTTAAGTCTGCTTACTTAAAAGG 58.331 37.037 18.54 16.34 46.15 3.11
4530 4889 8.915057 ATATCATACCAAATCTTTGAGGAGTG 57.085 34.615 4.25 0.00 40.55 3.51
4531 4890 6.373005 TCATACCAAATCTTTGAGGAGTGA 57.627 37.500 4.25 0.01 40.55 3.41
4533 4892 7.230747 TCATACCAAATCTTTGAGGAGTGAAA 58.769 34.615 4.25 0.00 40.55 2.69
4554 4913 9.855021 GTGAAAATATTAAAATGTGGCAGTAGT 57.145 29.630 0.00 0.00 0.00 2.73
4566 4925 6.067263 TGTGGCAGTAGTTCAAATGTAAAC 57.933 37.500 0.00 0.00 0.00 2.01
4620 4980 9.573133 AAATAGTTCAAACTTGAAGTCAACTTG 57.427 29.630 17.20 10.52 45.13 3.16
4621 4981 6.575162 AGTTCAAACTTGAAGTCAACTTGT 57.425 33.333 5.13 0.00 45.13 3.16
4622 4982 6.381801 AGTTCAAACTTGAAGTCAACTTGTG 58.618 36.000 5.13 0.00 45.13 3.33
4623 4983 4.732784 TCAAACTTGAAGTCAACTTGTGC 58.267 39.130 0.00 0.00 36.11 4.57
4624 4984 3.405170 AACTTGAAGTCAACTTGTGCG 57.595 42.857 0.00 0.00 36.11 5.34
4625 4985 2.627945 ACTTGAAGTCAACTTGTGCGA 58.372 42.857 0.00 0.00 36.11 5.10
4626 4986 3.206150 ACTTGAAGTCAACTTGTGCGAT 58.794 40.909 0.00 0.00 36.11 4.58
4627 4987 4.377021 ACTTGAAGTCAACTTGTGCGATA 58.623 39.130 0.00 0.00 36.11 2.92
4628 4988 4.997395 ACTTGAAGTCAACTTGTGCGATAT 59.003 37.500 0.00 0.00 36.11 1.63
4629 4989 5.120830 ACTTGAAGTCAACTTGTGCGATATC 59.879 40.000 0.00 0.00 36.11 1.63
4630 4990 3.612423 TGAAGTCAACTTGTGCGATATCG 59.388 43.478 20.79 20.79 38.21 2.92
4631 4991 3.232213 AGTCAACTTGTGCGATATCGT 57.768 42.857 24.99 2.35 42.22 3.73
4632 4992 4.365899 AGTCAACTTGTGCGATATCGTA 57.634 40.909 24.99 19.06 42.22 3.43
4642 5002 5.652744 GTGCGATATCGTACCAAATCTTT 57.347 39.130 29.18 0.00 46.64 2.52
4643 5003 5.432157 GTGCGATATCGTACCAAATCTTTG 58.568 41.667 29.18 0.00 46.64 2.77
4644 5004 5.233476 GTGCGATATCGTACCAAATCTTTGA 59.767 40.000 29.18 0.00 46.64 2.69
4645 5005 5.462068 TGCGATATCGTACCAAATCTTTGAG 59.538 40.000 24.99 0.00 39.94 3.02
4646 5006 5.690409 GCGATATCGTACCAAATCTTTGAGA 59.310 40.000 24.99 0.00 39.94 3.27
4647 5007 6.200286 GCGATATCGTACCAAATCTTTGAGAA 59.800 38.462 24.99 0.00 39.94 2.87
4648 5008 7.567771 GCGATATCGTACCAAATCTTTGAGAAG 60.568 40.741 24.99 0.00 39.94 2.85
4649 5009 7.435488 CGATATCGTACCAAATCTTTGAGAAGT 59.565 37.037 17.06 0.00 36.04 3.01
4650 5010 6.727824 ATCGTACCAAATCTTTGAGAAGTG 57.272 37.500 4.25 0.00 40.55 3.16
4651 5011 5.849510 TCGTACCAAATCTTTGAGAAGTGA 58.150 37.500 4.25 0.00 40.55 3.41
4652 5012 6.285224 TCGTACCAAATCTTTGAGAAGTGAA 58.715 36.000 4.25 0.00 40.55 3.18
4653 5013 6.764085 TCGTACCAAATCTTTGAGAAGTGAAA 59.236 34.615 4.25 0.00 40.55 2.69
4654 5014 7.281324 TCGTACCAAATCTTTGAGAAGTGAAAA 59.719 33.333 4.25 0.00 40.55 2.29
4655 5015 8.076178 CGTACCAAATCTTTGAGAAGTGAAAAT 58.924 33.333 4.25 0.00 40.55 1.82
4656 5016 9.185192 GTACCAAATCTTTGAGAAGTGAAAATG 57.815 33.333 4.25 0.00 40.55 2.32
4657 5017 7.785033 ACCAAATCTTTGAGAAGTGAAAATGT 58.215 30.769 4.25 0.00 40.55 2.71
4658 5018 8.260114 ACCAAATCTTTGAGAAGTGAAAATGTT 58.740 29.630 4.25 0.00 40.55 2.71
4659 5019 9.748708 CCAAATCTTTGAGAAGTGAAAATGTTA 57.251 29.630 4.25 0.00 40.55 2.41
4665 5025 9.853921 CTTTGAGAAGTGAAAATGTTAAAATGC 57.146 29.630 0.00 0.00 0.00 3.56
4666 5026 7.621832 TGAGAAGTGAAAATGTTAAAATGCG 57.378 32.000 0.00 0.00 0.00 4.73
4667 5027 6.640499 TGAGAAGTGAAAATGTTAAAATGCGG 59.360 34.615 0.00 0.00 0.00 5.69
4668 5028 5.405269 AGAAGTGAAAATGTTAAAATGCGGC 59.595 36.000 0.00 0.00 0.00 6.53
4669 5029 4.626042 AGTGAAAATGTTAAAATGCGGCA 58.374 34.783 4.58 4.58 0.00 5.69
4670 5030 5.053145 AGTGAAAATGTTAAAATGCGGCAA 58.947 33.333 6.82 0.00 0.00 4.52
4671 5031 5.700373 AGTGAAAATGTTAAAATGCGGCAAT 59.300 32.000 6.82 0.00 0.00 3.56
4672 5032 6.870965 AGTGAAAATGTTAAAATGCGGCAATA 59.129 30.769 6.82 0.00 0.00 1.90
4673 5033 7.063308 AGTGAAAATGTTAAAATGCGGCAATAG 59.937 33.333 6.82 0.00 0.00 1.73
4674 5034 6.870965 TGAAAATGTTAAAATGCGGCAATAGT 59.129 30.769 6.82 0.00 0.00 2.12
4675 5035 7.386299 TGAAAATGTTAAAATGCGGCAATAGTT 59.614 29.630 6.82 1.42 0.00 2.24
4676 5036 6.885735 AATGTTAAAATGCGGCAATAGTTC 57.114 33.333 6.82 0.00 0.00 3.01
4677 5037 5.378292 TGTTAAAATGCGGCAATAGTTCA 57.622 34.783 6.82 0.41 0.00 3.18
4678 5038 5.773575 TGTTAAAATGCGGCAATAGTTCAA 58.226 33.333 6.82 0.00 0.00 2.69
4679 5039 6.216569 TGTTAAAATGCGGCAATAGTTCAAA 58.783 32.000 6.82 0.00 0.00 2.69
4680 5040 6.870965 TGTTAAAATGCGGCAATAGTTCAAAT 59.129 30.769 6.82 0.00 0.00 2.32
4681 5041 5.783100 AAAATGCGGCAATAGTTCAAATG 57.217 34.783 6.82 0.00 0.00 2.32
4682 5042 4.454728 AATGCGGCAATAGTTCAAATGT 57.545 36.364 6.82 0.00 0.00 2.71
4683 5043 5.574891 AATGCGGCAATAGTTCAAATGTA 57.425 34.783 6.82 0.00 0.00 2.29
4684 5044 5.574891 ATGCGGCAATAGTTCAAATGTAA 57.425 34.783 6.82 0.00 0.00 2.41
4685 5045 5.378292 TGCGGCAATAGTTCAAATGTAAA 57.622 34.783 0.00 0.00 0.00 2.01
4686 5046 5.960113 TGCGGCAATAGTTCAAATGTAAAT 58.040 33.333 0.00 0.00 0.00 1.40
4687 5047 7.089770 TGCGGCAATAGTTCAAATGTAAATA 57.910 32.000 0.00 0.00 0.00 1.40
4688 5048 7.711846 TGCGGCAATAGTTCAAATGTAAATAT 58.288 30.769 0.00 0.00 0.00 1.28
4689 5049 8.194104 TGCGGCAATAGTTCAAATGTAAATATT 58.806 29.630 0.00 0.00 29.75 1.28
4690 5050 9.672086 GCGGCAATAGTTCAAATGTAAATATTA 57.328 29.630 0.00 0.00 28.97 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.766174 TCGTACTTTTTACATCTTTTGGGCT 59.234 36.000 0.00 0.00 0.00 5.19
1 2 6.004408 TCGTACTTTTTACATCTTTTGGGC 57.996 37.500 0.00 0.00 0.00 5.36
2 3 7.812648 TCATCGTACTTTTTACATCTTTTGGG 58.187 34.615 0.00 0.00 0.00 4.12
3 4 9.329913 CTTCATCGTACTTTTTACATCTTTTGG 57.670 33.333 0.00 0.00 0.00 3.28
4 5 9.878599 ACTTCATCGTACTTTTTACATCTTTTG 57.121 29.630 0.00 0.00 0.00 2.44
53 54 8.780846 ATGAGACACGTATTACCATGTAAAAA 57.219 30.769 0.00 0.00 0.00 1.94
54 55 8.780846 AATGAGACACGTATTACCATGTAAAA 57.219 30.769 0.00 0.00 0.00 1.52
55 56 8.780846 AAATGAGACACGTATTACCATGTAAA 57.219 30.769 0.00 0.00 0.00 2.01
68 69 9.862371 GATCCTTATGATATAAATGAGACACGT 57.138 33.333 0.00 0.00 32.41 4.49
69 70 9.860898 TGATCCTTATGATATAAATGAGACACG 57.139 33.333 0.00 0.00 32.41 4.49
84 85 9.271921 ACATGGCTTATACTATGATCCTTATGA 57.728 33.333 0.00 0.00 0.00 2.15
87 88 9.541884 TGTACATGGCTTATACTATGATCCTTA 57.458 33.333 0.00 0.00 0.00 2.69
88 89 8.435931 TGTACATGGCTTATACTATGATCCTT 57.564 34.615 0.00 0.00 0.00 3.36
89 90 8.435931 TTGTACATGGCTTATACTATGATCCT 57.564 34.615 0.00 0.00 0.00 3.24
90 91 8.936864 GTTTGTACATGGCTTATACTATGATCC 58.063 37.037 0.00 0.00 0.00 3.36
91 92 8.936864 GGTTTGTACATGGCTTATACTATGATC 58.063 37.037 0.00 0.00 0.00 2.92
92 93 7.602644 CGGTTTGTACATGGCTTATACTATGAT 59.397 37.037 0.00 0.00 0.00 2.45
93 94 6.926826 CGGTTTGTACATGGCTTATACTATGA 59.073 38.462 0.00 0.00 0.00 2.15
94 95 6.926826 TCGGTTTGTACATGGCTTATACTATG 59.073 38.462 0.00 0.00 0.00 2.23
95 96 6.927381 GTCGGTTTGTACATGGCTTATACTAT 59.073 38.462 0.00 0.00 0.00 2.12
96 97 6.275335 GTCGGTTTGTACATGGCTTATACTA 58.725 40.000 0.00 0.00 0.00 1.82
97 98 5.114081 GTCGGTTTGTACATGGCTTATACT 58.886 41.667 0.00 0.00 0.00 2.12
98 99 4.271776 GGTCGGTTTGTACATGGCTTATAC 59.728 45.833 0.00 0.00 0.00 1.47
99 100 4.162698 AGGTCGGTTTGTACATGGCTTATA 59.837 41.667 0.00 0.00 0.00 0.98
100 101 3.054655 AGGTCGGTTTGTACATGGCTTAT 60.055 43.478 0.00 0.00 0.00 1.73
101 102 2.303600 AGGTCGGTTTGTACATGGCTTA 59.696 45.455 0.00 0.00 0.00 3.09
102 103 1.073284 AGGTCGGTTTGTACATGGCTT 59.927 47.619 0.00 0.00 0.00 4.35
103 104 0.690762 AGGTCGGTTTGTACATGGCT 59.309 50.000 0.00 0.00 0.00 4.75
104 105 0.802494 CAGGTCGGTTTGTACATGGC 59.198 55.000 0.00 0.00 0.00 4.40
105 106 2.073816 GTCAGGTCGGTTTGTACATGG 58.926 52.381 0.00 0.00 0.00 3.66
106 107 2.761559 TGTCAGGTCGGTTTGTACATG 58.238 47.619 0.00 0.00 0.00 3.21
107 108 3.478857 TTGTCAGGTCGGTTTGTACAT 57.521 42.857 0.00 0.00 0.00 2.29
108 109 2.983907 TTGTCAGGTCGGTTTGTACA 57.016 45.000 0.00 0.00 0.00 2.90
109 110 3.624410 AGTTTTGTCAGGTCGGTTTGTAC 59.376 43.478 0.00 0.00 0.00 2.90
110 111 3.623960 CAGTTTTGTCAGGTCGGTTTGTA 59.376 43.478 0.00 0.00 0.00 2.41
111 112 2.422127 CAGTTTTGTCAGGTCGGTTTGT 59.578 45.455 0.00 0.00 0.00 2.83
112 113 2.680841 TCAGTTTTGTCAGGTCGGTTTG 59.319 45.455 0.00 0.00 0.00 2.93
113 114 2.993937 TCAGTTTTGTCAGGTCGGTTT 58.006 42.857 0.00 0.00 0.00 3.27
114 115 2.702592 TCAGTTTTGTCAGGTCGGTT 57.297 45.000 0.00 0.00 0.00 4.44
115 116 2.702592 TTCAGTTTTGTCAGGTCGGT 57.297 45.000 0.00 0.00 0.00 4.69
116 117 3.625764 TCTTTTCAGTTTTGTCAGGTCGG 59.374 43.478 0.00 0.00 0.00 4.79
117 118 4.094294 TGTCTTTTCAGTTTTGTCAGGTCG 59.906 41.667 0.00 0.00 0.00 4.79
118 119 5.560966 TGTCTTTTCAGTTTTGTCAGGTC 57.439 39.130 0.00 0.00 0.00 3.85
119 120 5.242838 TGTTGTCTTTTCAGTTTTGTCAGGT 59.757 36.000 0.00 0.00 0.00 4.00
120 121 5.708948 TGTTGTCTTTTCAGTTTTGTCAGG 58.291 37.500 0.00 0.00 0.00 3.86
121 122 7.636259 TTTGTTGTCTTTTCAGTTTTGTCAG 57.364 32.000 0.00 0.00 0.00 3.51
122 123 7.306283 CGTTTTGTTGTCTTTTCAGTTTTGTCA 60.306 33.333 0.00 0.00 0.00 3.58
123 124 7.001347 CGTTTTGTTGTCTTTTCAGTTTTGTC 58.999 34.615 0.00 0.00 0.00 3.18
124 125 6.563196 GCGTTTTGTTGTCTTTTCAGTTTTGT 60.563 34.615 0.00 0.00 0.00 2.83
125 126 5.783169 GCGTTTTGTTGTCTTTTCAGTTTTG 59.217 36.000 0.00 0.00 0.00 2.44
126 127 5.694458 AGCGTTTTGTTGTCTTTTCAGTTTT 59.306 32.000 0.00 0.00 0.00 2.43
127 128 5.227152 AGCGTTTTGTTGTCTTTTCAGTTT 58.773 33.333 0.00 0.00 0.00 2.66
128 129 4.805219 AGCGTTTTGTTGTCTTTTCAGTT 58.195 34.783 0.00 0.00 0.00 3.16
129 130 4.434713 AGCGTTTTGTTGTCTTTTCAGT 57.565 36.364 0.00 0.00 0.00 3.41
130 131 5.328691 TGTAGCGTTTTGTTGTCTTTTCAG 58.671 37.500 0.00 0.00 0.00 3.02
131 132 5.298197 TGTAGCGTTTTGTTGTCTTTTCA 57.702 34.783 0.00 0.00 0.00 2.69
132 133 6.620253 TTTGTAGCGTTTTGTTGTCTTTTC 57.380 33.333 0.00 0.00 0.00 2.29
133 134 6.643360 ACTTTTGTAGCGTTTTGTTGTCTTTT 59.357 30.769 0.00 0.00 0.00 2.27
134 135 6.153756 ACTTTTGTAGCGTTTTGTTGTCTTT 58.846 32.000 0.00 0.00 0.00 2.52
135 136 5.705902 ACTTTTGTAGCGTTTTGTTGTCTT 58.294 33.333 0.00 0.00 0.00 3.01
136 137 5.305139 ACTTTTGTAGCGTTTTGTTGTCT 57.695 34.783 0.00 0.00 0.00 3.41
137 138 6.344702 GCATACTTTTGTAGCGTTTTGTTGTC 60.345 38.462 0.00 0.00 38.44 3.18
138 139 5.457473 GCATACTTTTGTAGCGTTTTGTTGT 59.543 36.000 0.00 0.00 38.44 3.32
139 140 5.457148 TGCATACTTTTGTAGCGTTTTGTTG 59.543 36.000 0.00 0.00 38.44 3.33
140 141 5.583495 TGCATACTTTTGTAGCGTTTTGTT 58.417 33.333 0.00 0.00 38.44 2.83
141 142 5.176407 TGCATACTTTTGTAGCGTTTTGT 57.824 34.783 0.00 0.00 38.44 2.83
142 143 5.443170 GCATGCATACTTTTGTAGCGTTTTG 60.443 40.000 14.21 0.00 38.44 2.44
143 144 4.621034 GCATGCATACTTTTGTAGCGTTTT 59.379 37.500 14.21 0.00 38.44 2.43
144 145 4.165779 GCATGCATACTTTTGTAGCGTTT 58.834 39.130 14.21 0.00 38.44 3.60
145 146 3.190327 TGCATGCATACTTTTGTAGCGTT 59.810 39.130 18.46 0.00 38.44 4.84
146 147 2.746904 TGCATGCATACTTTTGTAGCGT 59.253 40.909 18.46 0.00 38.44 5.07
147 148 3.403613 TGCATGCATACTTTTGTAGCG 57.596 42.857 18.46 0.00 38.44 4.26
148 149 6.264832 TGTAATGCATGCATACTTTTGTAGC 58.735 36.000 32.36 13.77 38.44 3.58
149 150 8.686397 TTTGTAATGCATGCATACTTTTGTAG 57.314 30.769 32.36 0.00 38.44 2.74
150 151 9.650539 ATTTTGTAATGCATGCATACTTTTGTA 57.349 25.926 32.36 16.65 39.50 2.41
151 152 7.959689 TTTTGTAATGCATGCATACTTTTGT 57.040 28.000 32.36 17.69 35.31 2.83
159 160 9.163899 TGTTCAATAATTTTGTAATGCATGCAT 57.836 25.926 27.46 27.46 38.46 3.96
160 161 8.543862 TGTTCAATAATTTTGTAATGCATGCA 57.456 26.923 25.04 25.04 0.00 3.96
177 178 9.310449 GGAGGGAGTACTCTAATATGTTCAATA 57.690 37.037 21.88 0.00 37.63 1.90
178 179 7.789831 TGGAGGGAGTACTCTAATATGTTCAAT 59.210 37.037 21.88 0.00 37.63 2.57
179 180 7.130099 TGGAGGGAGTACTCTAATATGTTCAA 58.870 38.462 21.88 0.87 37.63 2.69
180 181 6.679542 TGGAGGGAGTACTCTAATATGTTCA 58.320 40.000 21.88 6.45 37.63 3.18
181 182 7.784470 ATGGAGGGAGTACTCTAATATGTTC 57.216 40.000 21.88 8.35 37.63 3.18
182 183 7.235812 GGAATGGAGGGAGTACTCTAATATGTT 59.764 40.741 21.88 9.53 37.63 2.71
183 184 6.726764 GGAATGGAGGGAGTACTCTAATATGT 59.273 42.308 21.88 4.08 37.63 2.29
184 185 6.726299 TGGAATGGAGGGAGTACTCTAATATG 59.274 42.308 21.88 0.00 37.63 1.78
185 186 6.875469 TGGAATGGAGGGAGTACTCTAATAT 58.125 40.000 21.88 8.25 37.63 1.28
186 187 6.289482 TGGAATGGAGGGAGTACTCTAATA 57.711 41.667 21.88 6.38 37.63 0.98
187 188 5.157770 TGGAATGGAGGGAGTACTCTAAT 57.842 43.478 21.88 8.59 37.63 1.73
188 189 4.620086 TGGAATGGAGGGAGTACTCTAA 57.380 45.455 21.88 4.67 37.63 2.10
189 190 4.620086 TTGGAATGGAGGGAGTACTCTA 57.380 45.455 21.88 5.06 37.63 2.43
190 191 3.491766 TTGGAATGGAGGGAGTACTCT 57.508 47.619 21.88 3.41 37.63 3.24
191 192 4.569719 TTTTGGAATGGAGGGAGTACTC 57.430 45.455 14.87 14.87 36.76 2.59
192 193 6.848562 ATATTTTGGAATGGAGGGAGTACT 57.151 37.500 0.00 0.00 0.00 2.73
193 194 7.661847 CACTATATTTTGGAATGGAGGGAGTAC 59.338 40.741 0.00 0.00 0.00 2.73
194 195 7.691791 GCACTATATTTTGGAATGGAGGGAGTA 60.692 40.741 0.00 0.00 0.00 2.59
195 196 6.605119 CACTATATTTTGGAATGGAGGGAGT 58.395 40.000 0.00 0.00 0.00 3.85
196 197 5.474876 GCACTATATTTTGGAATGGAGGGAG 59.525 44.000 0.00 0.00 0.00 4.30
197 198 5.103728 TGCACTATATTTTGGAATGGAGGGA 60.104 40.000 0.00 0.00 0.00 4.20
198 199 5.139727 TGCACTATATTTTGGAATGGAGGG 58.860 41.667 0.00 0.00 0.00 4.30
199 200 6.713762 TTGCACTATATTTTGGAATGGAGG 57.286 37.500 0.00 0.00 0.00 4.30
200 201 6.211515 GCTTGCACTATATTTTGGAATGGAG 58.788 40.000 0.00 0.00 0.00 3.86
201 202 5.221028 CGCTTGCACTATATTTTGGAATGGA 60.221 40.000 0.00 0.00 0.00 3.41
202 203 4.977963 CGCTTGCACTATATTTTGGAATGG 59.022 41.667 0.00 0.00 0.00 3.16
203 204 4.442073 GCGCTTGCACTATATTTTGGAATG 59.558 41.667 0.00 0.00 38.92 2.67
204 205 4.339247 AGCGCTTGCACTATATTTTGGAAT 59.661 37.500 2.64 0.00 42.66 3.01
205 206 3.694072 AGCGCTTGCACTATATTTTGGAA 59.306 39.130 2.64 0.00 42.66 3.53
206 207 3.278574 AGCGCTTGCACTATATTTTGGA 58.721 40.909 2.64 0.00 42.66 3.53
207 208 3.698029 AGCGCTTGCACTATATTTTGG 57.302 42.857 2.64 0.00 42.66 3.28
208 209 4.913376 AGAAGCGCTTGCACTATATTTTG 58.087 39.130 30.47 0.00 42.66 2.44
209 210 5.335127 CAAGAAGCGCTTGCACTATATTTT 58.665 37.500 30.47 0.00 46.67 1.82
210 211 4.913376 CAAGAAGCGCTTGCACTATATTT 58.087 39.130 30.47 0.00 46.67 1.40
211 212 4.542662 CAAGAAGCGCTTGCACTATATT 57.457 40.909 30.47 1.46 46.67 1.28
221 222 0.108585 TTGGACCTCAAGAAGCGCTT 59.891 50.000 25.35 25.35 37.29 4.68
222 223 0.603975 GTTGGACCTCAAGAAGCGCT 60.604 55.000 2.64 2.64 35.80 5.92
223 224 0.603975 AGTTGGACCTCAAGAAGCGC 60.604 55.000 0.00 0.00 35.80 5.92
224 225 1.884235 AAGTTGGACCTCAAGAAGCG 58.116 50.000 0.00 0.00 35.80 4.68
225 226 4.023107 GGTTAAAGTTGGACCTCAAGAAGC 60.023 45.833 0.00 0.00 35.80 3.86
226 227 5.130350 TGGTTAAAGTTGGACCTCAAGAAG 58.870 41.667 8.80 0.00 35.80 2.85
227 228 5.118729 TGGTTAAAGTTGGACCTCAAGAA 57.881 39.130 8.80 0.00 35.80 2.52
228 229 4.781775 TGGTTAAAGTTGGACCTCAAGA 57.218 40.909 8.80 0.00 35.80 3.02
229 230 7.519032 TTTATGGTTAAAGTTGGACCTCAAG 57.481 36.000 8.80 0.00 35.80 3.02
230 231 8.485578 AATTTATGGTTAAAGTTGGACCTCAA 57.514 30.769 8.80 1.93 34.52 3.02
231 232 8.485578 AAATTTATGGTTAAAGTTGGACCTCA 57.514 30.769 8.80 0.00 35.08 3.86
234 235 9.426837 GGTTAAATTTATGGTTAAAGTTGGACC 57.573 33.333 0.00 1.82 36.56 4.46
235 236 9.984190 TGGTTAAATTTATGGTTAAAGTTGGAC 57.016 29.630 0.00 2.05 36.56 4.02
240 241 9.902196 CTCGTTGGTTAAATTTATGGTTAAAGT 57.098 29.630 0.00 0.00 31.07 2.66
242 243 9.896263 GTCTCGTTGGTTAAATTTATGGTTAAA 57.104 29.630 0.00 0.00 0.00 1.52
243 244 8.513774 GGTCTCGTTGGTTAAATTTATGGTTAA 58.486 33.333 0.00 0.00 0.00 2.01
244 245 7.148440 CGGTCTCGTTGGTTAAATTTATGGTTA 60.148 37.037 0.00 0.00 0.00 2.85
245 246 6.348704 CGGTCTCGTTGGTTAAATTTATGGTT 60.349 38.462 0.00 0.00 0.00 3.67
246 247 5.122711 CGGTCTCGTTGGTTAAATTTATGGT 59.877 40.000 0.00 0.00 0.00 3.55
247 248 5.352016 TCGGTCTCGTTGGTTAAATTTATGG 59.648 40.000 0.00 0.00 37.69 2.74
248 249 6.091713 AGTCGGTCTCGTTGGTTAAATTTATG 59.908 38.462 0.00 0.00 37.69 1.90
249 250 6.091713 CAGTCGGTCTCGTTGGTTAAATTTAT 59.908 38.462 0.00 0.00 37.69 1.40
250 251 5.406175 CAGTCGGTCTCGTTGGTTAAATTTA 59.594 40.000 0.00 0.00 37.69 1.40
251 252 4.212636 CAGTCGGTCTCGTTGGTTAAATTT 59.787 41.667 0.00 0.00 37.69 1.82
252 253 3.744426 CAGTCGGTCTCGTTGGTTAAATT 59.256 43.478 0.00 0.00 37.69 1.82
253 254 3.323243 CAGTCGGTCTCGTTGGTTAAAT 58.677 45.455 0.00 0.00 37.69 1.40
254 255 2.746269 CAGTCGGTCTCGTTGGTTAAA 58.254 47.619 0.00 0.00 37.69 1.52
255 256 1.603678 GCAGTCGGTCTCGTTGGTTAA 60.604 52.381 0.00 0.00 37.69 2.01
256 257 0.038892 GCAGTCGGTCTCGTTGGTTA 60.039 55.000 0.00 0.00 37.69 2.85
257 258 1.300697 GCAGTCGGTCTCGTTGGTT 60.301 57.895 0.00 0.00 37.69 3.67
258 259 2.338984 GCAGTCGGTCTCGTTGGT 59.661 61.111 0.00 0.00 37.69 3.67
259 260 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
269 270 1.837538 TTTTTCTTCCGCCGCAGTCG 61.838 55.000 0.00 0.00 0.00 4.18
270 271 1.946267 TTTTTCTTCCGCCGCAGTC 59.054 52.632 0.00 0.00 0.00 3.51
271 272 4.150994 TTTTTCTTCCGCCGCAGT 57.849 50.000 0.00 0.00 0.00 4.40
314 315 9.730420 GCAAAATTTATACCAGTGAATTCGTAT 57.270 29.630 0.04 5.16 0.00 3.06
315 316 8.952278 AGCAAAATTTATACCAGTGAATTCGTA 58.048 29.630 0.04 0.00 0.00 3.43
316 317 7.826690 AGCAAAATTTATACCAGTGAATTCGT 58.173 30.769 0.04 0.00 0.00 3.85
317 318 8.687824 AAGCAAAATTTATACCAGTGAATTCG 57.312 30.769 0.04 0.00 0.00 3.34
318 319 9.860898 AGAAGCAAAATTTATACCAGTGAATTC 57.139 29.630 0.00 0.00 0.00 2.17
319 320 9.643693 CAGAAGCAAAATTTATACCAGTGAATT 57.356 29.630 0.00 0.00 0.00 2.17
320 321 8.806146 ACAGAAGCAAAATTTATACCAGTGAAT 58.194 29.630 0.00 0.00 0.00 2.57
321 322 8.177119 ACAGAAGCAAAATTTATACCAGTGAA 57.823 30.769 0.00 0.00 0.00 3.18
322 323 7.360861 CGACAGAAGCAAAATTTATACCAGTGA 60.361 37.037 0.00 0.00 0.00 3.41
323 324 6.742718 CGACAGAAGCAAAATTTATACCAGTG 59.257 38.462 0.00 0.00 0.00 3.66
324 325 6.622896 GCGACAGAAGCAAAATTTATACCAGT 60.623 38.462 0.00 0.00 34.19 4.00
325 326 5.739161 GCGACAGAAGCAAAATTTATACCAG 59.261 40.000 0.00 0.00 34.19 4.00
326 327 5.182190 TGCGACAGAAGCAAAATTTATACCA 59.818 36.000 0.00 0.00 42.18 3.25
327 328 5.636837 TGCGACAGAAGCAAAATTTATACC 58.363 37.500 0.00 0.00 42.18 2.73
328 329 6.314784 ACTGCGACAGAAGCAAAATTTATAC 58.685 36.000 12.77 0.00 44.67 1.47
329 330 6.494893 ACTGCGACAGAAGCAAAATTTATA 57.505 33.333 12.77 0.00 44.67 0.98
330 331 5.376854 ACTGCGACAGAAGCAAAATTTAT 57.623 34.783 12.77 0.00 44.67 1.40
331 332 4.610456 CGACTGCGACAGAAGCAAAATTTA 60.610 41.667 12.77 0.00 44.67 1.40
332 333 3.632189 GACTGCGACAGAAGCAAAATTT 58.368 40.909 12.77 0.00 44.67 1.82
333 334 2.349817 CGACTGCGACAGAAGCAAAATT 60.350 45.455 12.77 0.00 44.67 1.82
334 335 1.195448 CGACTGCGACAGAAGCAAAAT 59.805 47.619 12.77 0.00 44.67 1.82
335 336 0.581529 CGACTGCGACAGAAGCAAAA 59.418 50.000 12.77 0.00 44.67 2.44
336 337 1.221466 CCGACTGCGACAGAAGCAAA 61.221 55.000 12.77 0.00 44.67 3.68
337 338 1.664649 CCGACTGCGACAGAAGCAA 60.665 57.895 12.77 0.00 44.67 3.91
338 339 2.049156 CCGACTGCGACAGAAGCA 60.049 61.111 12.77 0.00 42.99 3.91
339 340 3.482783 GCCGACTGCGACAGAAGC 61.483 66.667 12.77 8.57 40.82 3.86
340 341 2.771763 AAGGCCGACTGCGACAGAAG 62.772 60.000 12.77 6.60 42.61 2.85
341 342 2.867855 AAGGCCGACTGCGACAGAA 61.868 57.895 12.77 0.00 42.61 3.02
342 343 3.303135 AAGGCCGACTGCGACAGA 61.303 61.111 12.77 0.00 42.61 3.41
343 344 3.114616 CAAGGCCGACTGCGACAG 61.115 66.667 0.00 5.47 42.61 3.51
344 345 3.454587 AACAAGGCCGACTGCGACA 62.455 57.895 0.00 0.00 42.61 4.35
345 346 2.665185 AACAAGGCCGACTGCGAC 60.665 61.111 0.00 0.00 42.61 5.19
346 347 2.664851 CAACAAGGCCGACTGCGA 60.665 61.111 0.00 0.00 42.61 5.10
347 348 3.726517 CCAACAAGGCCGACTGCG 61.727 66.667 0.00 0.00 42.61 5.18
348 349 0.887387 TAACCAACAAGGCCGACTGC 60.887 55.000 0.00 0.00 43.14 4.40
349 350 1.600023 TTAACCAACAAGGCCGACTG 58.400 50.000 0.00 0.00 43.14 3.51
350 351 2.351706 TTTAACCAACAAGGCCGACT 57.648 45.000 0.00 0.00 43.14 4.18
351 352 3.653539 AATTTAACCAACAAGGCCGAC 57.346 42.857 0.00 0.00 43.14 4.79
352 353 5.336849 CCATAAATTTAACCAACAAGGCCGA 60.337 40.000 1.21 0.00 43.14 5.54
353 354 4.867608 CCATAAATTTAACCAACAAGGCCG 59.132 41.667 1.21 0.00 43.14 6.13
354 355 5.800296 ACCATAAATTTAACCAACAAGGCC 58.200 37.500 1.21 0.00 43.14 5.19
355 356 6.459923 TGACCATAAATTTAACCAACAAGGC 58.540 36.000 1.21 0.00 43.14 4.35
356 357 8.894768 TTTGACCATAAATTTAACCAACAAGG 57.105 30.769 1.21 0.00 45.67 3.61
357 358 9.541143 ACTTTGACCATAAATTTAACCAACAAG 57.459 29.630 1.21 4.46 0.00 3.16
358 359 9.892130 AACTTTGACCATAAATTTAACCAACAA 57.108 25.926 1.21 3.68 0.00 2.83
359 360 9.319143 CAACTTTGACCATAAATTTAACCAACA 57.681 29.630 1.21 0.00 0.00 3.33
360 361 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
362 363 9.757227 CTTCAACTTTGACCATAAATTTAACCA 57.243 29.630 1.21 0.00 36.83 3.67
363 364 8.708742 GCTTCAACTTTGACCATAAATTTAACC 58.291 33.333 1.21 0.00 36.83 2.85
364 365 9.255304 TGCTTCAACTTTGACCATAAATTTAAC 57.745 29.630 1.21 0.00 36.83 2.01
365 366 9.255304 GTGCTTCAACTTTGACCATAAATTTAA 57.745 29.630 1.21 0.00 36.83 1.52
366 367 7.593273 CGTGCTTCAACTTTGACCATAAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
367 368 6.420604 CGTGCTTCAACTTTGACCATAAATTT 59.579 34.615 0.00 0.00 36.83 1.82
368 369 5.920273 CGTGCTTCAACTTTGACCATAAATT 59.080 36.000 0.00 0.00 36.83 1.82
369 370 5.240623 TCGTGCTTCAACTTTGACCATAAAT 59.759 36.000 0.00 0.00 36.83 1.40
370 371 4.576873 TCGTGCTTCAACTTTGACCATAAA 59.423 37.500 0.00 0.00 36.83 1.40
371 372 4.130857 TCGTGCTTCAACTTTGACCATAA 58.869 39.130 0.00 0.00 36.83 1.90
372 373 3.734463 TCGTGCTTCAACTTTGACCATA 58.266 40.909 0.00 0.00 36.83 2.74
373 374 2.571212 TCGTGCTTCAACTTTGACCAT 58.429 42.857 0.00 0.00 36.83 3.55
374 375 2.031258 TCGTGCTTCAACTTTGACCA 57.969 45.000 0.00 0.00 36.83 4.02
375 376 3.414549 TTTCGTGCTTCAACTTTGACC 57.585 42.857 0.00 0.00 36.83 4.02
376 377 6.427150 TCTATTTTCGTGCTTCAACTTTGAC 58.573 36.000 0.00 0.00 36.83 3.18
377 378 6.481976 TCTCTATTTTCGTGCTTCAACTTTGA 59.518 34.615 0.00 0.00 34.92 2.69
378 379 6.658831 TCTCTATTTTCGTGCTTCAACTTTG 58.341 36.000 0.00 0.00 0.00 2.77
379 380 6.861065 TCTCTATTTTCGTGCTTCAACTTT 57.139 33.333 0.00 0.00 0.00 2.66
380 381 6.861065 TTCTCTATTTTCGTGCTTCAACTT 57.139 33.333 0.00 0.00 0.00 2.66
381 382 6.861065 TTTCTCTATTTTCGTGCTTCAACT 57.139 33.333 0.00 0.00 0.00 3.16
382 383 6.910433 TGTTTTCTCTATTTTCGTGCTTCAAC 59.090 34.615 0.00 0.00 0.00 3.18
383 384 6.910433 GTGTTTTCTCTATTTTCGTGCTTCAA 59.090 34.615 0.00 0.00 0.00 2.69
384 385 6.260050 AGTGTTTTCTCTATTTTCGTGCTTCA 59.740 34.615 0.00 0.00 0.00 3.02
385 386 6.659776 AGTGTTTTCTCTATTTTCGTGCTTC 58.340 36.000 0.00 0.00 0.00 3.86
386 387 6.619801 AGTGTTTTCTCTATTTTCGTGCTT 57.380 33.333 0.00 0.00 0.00 3.91
387 388 7.907214 ATAGTGTTTTCTCTATTTTCGTGCT 57.093 32.000 0.00 0.00 34.27 4.40
397 398 9.158233 CCGTTCCAAAATATAGTGTTTTCTCTA 57.842 33.333 0.00 0.00 0.00 2.43
398 399 7.881232 TCCGTTCCAAAATATAGTGTTTTCTCT 59.119 33.333 0.00 0.00 0.00 3.10
399 400 8.036273 TCCGTTCCAAAATATAGTGTTTTCTC 57.964 34.615 0.00 0.00 0.00 2.87
400 401 7.120726 CCTCCGTTCCAAAATATAGTGTTTTCT 59.879 37.037 0.00 0.00 0.00 2.52
401 402 7.248437 CCTCCGTTCCAAAATATAGTGTTTTC 58.752 38.462 0.00 0.00 0.00 2.29
402 403 6.152154 CCCTCCGTTCCAAAATATAGTGTTTT 59.848 38.462 0.00 0.00 0.00 2.43
403 404 5.650703 CCCTCCGTTCCAAAATATAGTGTTT 59.349 40.000 0.00 0.00 0.00 2.83
404 405 5.045432 TCCCTCCGTTCCAAAATATAGTGTT 60.045 40.000 0.00 0.00 0.00 3.32
405 406 4.472108 TCCCTCCGTTCCAAAATATAGTGT 59.528 41.667 0.00 0.00 0.00 3.55
406 407 5.031066 TCCCTCCGTTCCAAAATATAGTG 57.969 43.478 0.00 0.00 0.00 2.74
407 408 4.720273 ACTCCCTCCGTTCCAAAATATAGT 59.280 41.667 0.00 0.00 0.00 2.12
408 409 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
409 410 7.383156 AATACTCCCTCCGTTCCAAAATATA 57.617 36.000 0.00 0.00 0.00 0.86
410 411 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
411 412 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
412 413 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
413 414 4.080751 CCTAATACTCCCTCCGTTCCAAAA 60.081 45.833 0.00 0.00 0.00 2.44
414 415 3.453353 CCTAATACTCCCTCCGTTCCAAA 59.547 47.826 0.00 0.00 0.00 3.28
415 416 3.036091 CCTAATACTCCCTCCGTTCCAA 58.964 50.000 0.00 0.00 0.00 3.53
416 417 2.023695 ACCTAATACTCCCTCCGTTCCA 60.024 50.000 0.00 0.00 0.00 3.53
417 418 2.675583 ACCTAATACTCCCTCCGTTCC 58.324 52.381 0.00 0.00 0.00 3.62
418 419 6.416631 AAATACCTAATACTCCCTCCGTTC 57.583 41.667 0.00 0.00 0.00 3.95
419 420 9.779951 ATATAAATACCTAATACTCCCTCCGTT 57.220 33.333 0.00 0.00 0.00 4.44
491 492 8.683774 GCACGACTCGTTTATTTTTATTTTGAA 58.316 29.630 0.00 0.00 38.32 2.69
492 493 7.324135 GGCACGACTCGTTTATTTTTATTTTGA 59.676 33.333 0.00 0.00 38.32 2.69
493 494 7.433979 GGCACGACTCGTTTATTTTTATTTTG 58.566 34.615 0.00 0.00 38.32 2.44
494 495 7.557036 GGCACGACTCGTTTATTTTTATTTT 57.443 32.000 0.00 0.00 38.32 1.82
539 540 4.517934 CATGCCTGGGCCTGGAGG 62.518 72.222 31.46 18.34 41.09 4.30
552 553 4.151582 GCACACCATGGGCCATGC 62.152 66.667 35.99 24.90 41.97 4.06
587 588 4.404098 ACGGCCCTGGCTAAACGG 62.404 66.667 8.29 0.00 41.60 4.44
588 589 3.124921 CACGGCCCTGGCTAAACG 61.125 66.667 8.29 5.60 41.60 3.60
589 590 3.440415 GCACGGCCCTGGCTAAAC 61.440 66.667 8.29 0.00 41.60 2.01
590 591 4.733542 GGCACGGCCCTGGCTAAA 62.734 66.667 19.05 0.00 44.06 1.85
629 630 3.894547 AACGGGCCGTGCTAACTGG 62.895 63.158 34.87 0.00 39.99 4.00
630 631 1.964373 AAACGGGCCGTGCTAACTG 60.964 57.895 34.87 0.00 39.99 3.16
631 632 1.964373 CAAACGGGCCGTGCTAACT 60.964 57.895 34.87 13.44 39.99 2.24
632 633 2.559330 CAAACGGGCCGTGCTAAC 59.441 61.111 34.87 0.00 39.99 2.34
633 634 2.670251 CCAAACGGGCCGTGCTAA 60.670 61.111 34.87 0.00 39.99 3.09
642 643 0.468226 TCTATAGCTGGCCAAACGGG 59.532 55.000 7.01 0.00 40.85 5.28
643 644 2.417719 GATCTATAGCTGGCCAAACGG 58.582 52.381 7.01 0.00 0.00 4.44
644 645 2.417719 GGATCTATAGCTGGCCAAACG 58.582 52.381 7.01 0.00 0.00 3.60
645 646 2.417719 CGGATCTATAGCTGGCCAAAC 58.582 52.381 7.01 1.16 0.00 2.93
646 647 1.270839 GCGGATCTATAGCTGGCCAAA 60.271 52.381 7.01 0.00 0.00 3.28
647 648 0.321671 GCGGATCTATAGCTGGCCAA 59.678 55.000 7.01 0.00 0.00 4.52
648 649 0.542938 AGCGGATCTATAGCTGGCCA 60.543 55.000 4.71 4.71 40.07 5.36
649 650 1.475403 TAGCGGATCTATAGCTGGCC 58.525 55.000 0.00 0.00 41.80 5.36
650 651 2.035321 GGATAGCGGATCTATAGCTGGC 59.965 54.545 0.00 0.00 41.80 4.85
651 652 3.291584 TGGATAGCGGATCTATAGCTGG 58.708 50.000 0.00 0.00 41.80 4.85
652 653 3.243367 GCTGGATAGCGGATCTATAGCTG 60.243 52.174 0.00 0.00 41.80 4.24
653 654 2.955660 GCTGGATAGCGGATCTATAGCT 59.044 50.000 0.00 0.00 40.67 3.32
654 655 3.363341 GCTGGATAGCGGATCTATAGC 57.637 52.381 0.00 6.16 40.67 2.97
666 667 0.962489 CGTAGGTCTGGGCTGGATAG 59.038 60.000 0.00 0.00 0.00 2.08
675 676 0.663688 CAGATCCGACGTAGGTCTGG 59.336 60.000 25.33 14.67 41.16 3.86
743 751 1.229177 GGAATGTGGGGGTTGCCTT 60.229 57.895 0.00 0.00 0.00 4.35
752 760 0.967380 GTTGGAGCCAGGAATGTGGG 60.967 60.000 0.00 0.00 38.14 4.61
758 766 0.110486 GTTGGAGTTGGAGCCAGGAA 59.890 55.000 0.00 0.00 35.23 3.36
762 770 0.321564 CGATGTTGGAGTTGGAGCCA 60.322 55.000 0.00 0.00 0.00 4.75
775 783 0.306533 GTTGGAACACGCACGATGTT 59.693 50.000 9.60 9.60 42.95 2.71
814 822 1.450025 GCCACCGGAGTTCTTTTAGG 58.550 55.000 9.46 0.00 0.00 2.69
816 824 0.393820 ACGCCACCGGAGTTCTTTTA 59.606 50.000 9.46 0.00 39.22 1.52
817 825 0.393820 TACGCCACCGGAGTTCTTTT 59.606 50.000 9.46 0.00 36.95 2.27
821 829 0.179153 GTAGTACGCCACCGGAGTTC 60.179 60.000 9.46 0.39 36.95 3.01
898 906 1.157585 GAGGAGTTTCGTTTGCCTCC 58.842 55.000 0.00 0.00 43.14 4.30
913 921 2.693017 GCAGGAGGAGGAGGAGGA 59.307 66.667 0.00 0.00 0.00 3.71
915 923 2.445654 GGGCAGGAGGAGGAGGAG 60.446 72.222 0.00 0.00 0.00 3.69
1006 1025 2.159170 GCTCGTAGACCTTCTGCTTCAT 60.159 50.000 0.00 0.00 0.00 2.57
1149 1168 3.168528 ACGCACCAGGACCAGGTT 61.169 61.111 5.68 0.00 37.23 3.50
1440 1478 1.135315 TGCTACGCTTGTAACTACCCG 60.135 52.381 0.00 0.00 0.00 5.28
1454 1492 3.062639 CCTAGACAAACATGCTTGCTACG 59.937 47.826 8.75 3.00 0.00 3.51
1461 1499 6.039047 CAGAAATATGCCTAGACAAACATGCT 59.961 38.462 0.00 0.00 0.00 3.79
1573 1611 7.765307 AGAACAATATAATGAGCAACCAACTG 58.235 34.615 0.00 0.00 0.00 3.16
1617 1655 3.062042 CACTGCCAAGGAAAGCAAATTC 58.938 45.455 0.00 0.00 38.82 2.17
1785 1823 2.483876 CCCATACAATCCGCAGTGTAG 58.516 52.381 0.00 0.00 36.55 2.74
1942 1980 2.026449 CCTCCTCATCTGGCTTTTCACT 60.026 50.000 0.00 0.00 0.00 3.41
2010 2048 2.092968 GGTTCATCATGGCCTCACTGTA 60.093 50.000 3.32 0.00 0.00 2.74
2023 2061 9.662947 CTTAGCATATCAATGATAGGTTCATCA 57.337 33.333 15.11 0.00 44.51 3.07
2024 2062 8.610896 GCTTAGCATATCAATGATAGGTTCATC 58.389 37.037 15.11 0.18 44.51 2.92
2068 2108 5.746721 GCAAAACAGGAATCGTTAACAGTTT 59.253 36.000 6.39 0.61 0.00 2.66
2100 2140 1.840635 AGGGGTAGCCTGAAATGAGAC 59.159 52.381 11.48 0.00 0.00 3.36
2189 2229 3.887621 AAAGGAGCTTACGTGATGCTA 57.112 42.857 10.82 0.00 38.62 3.49
2241 2281 6.514541 GCACTAGCACTACCGAATCTATACAA 60.515 42.308 0.00 0.00 41.58 2.41
2248 2288 1.409427 AGGCACTAGCACTACCGAATC 59.591 52.381 0.00 0.00 44.61 2.52
2302 2342 3.056393 ACTTACGCATAGTTGTGGCTACA 60.056 43.478 0.00 0.00 37.69 2.74
2308 2348 5.545658 ATTTCCACTTACGCATAGTTGTG 57.454 39.130 0.00 0.00 39.33 3.33
2365 2408 4.002982 TCACATGAACCATAACTCACTGC 58.997 43.478 0.00 0.00 0.00 4.40
2369 2412 4.395854 GTGCATCACATGAACCATAACTCA 59.604 41.667 0.00 0.00 32.36 3.41
2389 2432 2.294233 ACATATGGCAAATCGGATGTGC 59.706 45.455 22.29 22.29 37.55 4.57
2477 2520 5.235186 CAGAACTTAGTGGGCGATCTAATTG 59.765 44.000 0.00 0.00 0.00 2.32
2480 2523 3.767673 ACAGAACTTAGTGGGCGATCTAA 59.232 43.478 0.00 0.00 0.00 2.10
2494 2537 5.295787 TGATACGACAAAGCAAACAGAACTT 59.704 36.000 0.00 0.00 0.00 2.66
2663 2706 5.853282 GCAAGCAAGACAACAATAACTACAG 59.147 40.000 0.00 0.00 0.00 2.74
2894 2964 6.186957 TGCCAACTTACTGATGTGGAATAAT 58.813 36.000 0.00 0.00 0.00 1.28
2914 3072 1.271856 TAAGGAAGTCACGGATGCCA 58.728 50.000 0.00 0.00 0.00 4.92
2958 3116 4.227300 AGTTTAATATGACACTGGAGGCCA 59.773 41.667 5.01 0.00 0.00 5.36
2976 3224 5.938710 TCGTTGGGTTAATATGCACAGTTTA 59.061 36.000 0.00 0.00 0.00 2.01
2998 3246 3.248029 AGCACGCTTTCTGCTTCG 58.752 55.556 0.00 0.00 42.54 3.79
3083 3331 7.264373 ACTCTAATGCCGAAATATTGAAAGG 57.736 36.000 0.00 0.00 0.00 3.11
3100 3348 7.657761 CGCAAAACCTAATATCTGGACTCTAAT 59.342 37.037 1.50 0.00 0.00 1.73
3144 3392 6.539826 TGAATAACAGGATGCAGATAACACAG 59.460 38.462 0.00 0.00 42.53 3.66
3155 3403 5.376854 ACACAACTTGAATAACAGGATGC 57.623 39.130 0.00 0.00 42.53 3.91
3228 3476 4.117685 GGAAACACTTACACTGAAGACGT 58.882 43.478 0.00 0.00 0.00 4.34
3244 3492 7.519927 ACCACAAACCTACTATTAAGGAAACA 58.480 34.615 0.00 0.00 37.57 2.83
3307 3555 1.004927 GCTGGATAAACTACGCAAGCG 60.005 52.381 13.50 13.50 46.03 4.68
3311 3559 3.625764 GGAAATGCTGGATAAACTACGCA 59.374 43.478 0.00 0.00 0.00 5.24
3423 3671 2.632996 CTGTCCCACTAACAAGTGAGGA 59.367 50.000 7.09 8.83 42.02 3.71
3600 3848 4.650754 TTAGATACCGGTCAAGAAGAGC 57.349 45.455 12.40 0.00 41.32 4.09
3714 3962 2.935238 GCTTGTACTGCCCAGATCGAAA 60.935 50.000 1.69 0.00 0.00 3.46
3743 3991 0.751277 TGCATACCTTCAATGGGCGG 60.751 55.000 0.00 0.00 0.00 6.13
3797 4059 7.312183 GGGGGATTCTTCATTCTACCATATGAT 60.312 40.741 3.65 0.00 31.34 2.45
3905 4249 9.249053 AGATAAATGTGTTCTCTCTCAGTCTAA 57.751 33.333 0.00 0.00 0.00 2.10
3957 4301 7.148188 GCTATCTGACCATCTCTCTCAATCTAG 60.148 44.444 0.00 0.00 0.00 2.43
3962 4306 4.583907 CAGCTATCTGACCATCTCTCTCAA 59.416 45.833 0.00 0.00 42.95 3.02
3994 4338 1.677576 TCAGCTTTTCTGCAACACCAG 59.322 47.619 0.00 0.00 42.56 4.00
4022 4366 2.289945 ACCATGAACAGCTCACCTTCTC 60.290 50.000 0.00 0.00 36.69 2.87
4029 4373 1.375908 GGCGACCATGAACAGCTCA 60.376 57.895 0.00 0.00 38.81 4.26
4030 4374 2.456119 CGGCGACCATGAACAGCTC 61.456 63.158 0.00 0.00 0.00 4.09
4036 4380 2.032799 GCAATTATTCGGCGACCATGAA 59.967 45.455 10.16 0.00 0.00 2.57
4041 4385 0.317020 GCAGCAATTATTCGGCGACC 60.317 55.000 10.16 0.00 0.00 4.79
4105 4457 9.883142 AGTTTACAATTGAAAGTTCATTTCCAA 57.117 25.926 13.59 0.00 45.74 3.53
4155 4507 1.831736 ACCGTAAGAGGACCAATCAGG 59.168 52.381 0.00 0.00 42.40 3.86
4157 4509 2.028476 CACACCGTAAGAGGACCAATCA 60.028 50.000 0.00 0.00 43.02 2.57
4162 4514 0.037605 CACCACACCGTAAGAGGACC 60.038 60.000 0.00 0.00 43.02 4.46
4177 4529 0.461870 GTCATATCAGTGCGGCACCA 60.462 55.000 28.14 16.44 34.49 4.17
4178 4530 0.461870 TGTCATATCAGTGCGGCACC 60.462 55.000 28.14 11.62 34.49 5.01
4180 4532 2.330440 AATGTCATATCAGTGCGGCA 57.670 45.000 0.00 0.00 0.00 5.69
4192 4544 3.181507 CGGCGAAGAATCACAAATGTCAT 60.182 43.478 0.00 0.00 0.00 3.06
4193 4545 2.159430 CGGCGAAGAATCACAAATGTCA 59.841 45.455 0.00 0.00 0.00 3.58
4230 4582 9.102757 TCTATCCTTCGATTTTCAAGATTCAAG 57.897 33.333 0.00 0.00 0.00 3.02
4245 4597 7.497909 GTGTGGGAATTTTTATCTATCCTTCGA 59.502 37.037 0.00 0.00 0.00 3.71
4246 4598 7.499232 AGTGTGGGAATTTTTATCTATCCTTCG 59.501 37.037 0.00 0.00 0.00 3.79
4256 4608 6.493115 TGTCATGTCAGTGTGGGAATTTTTAT 59.507 34.615 0.00 0.00 0.00 1.40
4257 4609 5.830457 TGTCATGTCAGTGTGGGAATTTTTA 59.170 36.000 0.00 0.00 0.00 1.52
4258 4610 4.648762 TGTCATGTCAGTGTGGGAATTTTT 59.351 37.500 0.00 0.00 0.00 1.94
4264 4616 3.148412 CAAATGTCATGTCAGTGTGGGA 58.852 45.455 0.00 0.00 0.00 4.37
4267 4619 4.816786 TCACAAATGTCATGTCAGTGTG 57.183 40.909 22.42 22.42 38.00 3.82
4268 4620 6.183360 ACAAATCACAAATGTCATGTCAGTGT 60.183 34.615 9.46 7.95 0.00 3.55
4291 4643 4.201812 GCAGAGCTAATATGAACGCAAACA 60.202 41.667 0.00 0.00 0.00 2.83
4303 4655 3.374764 TGAAGACCAGGCAGAGCTAATA 58.625 45.455 0.00 0.00 0.00 0.98
4316 4668 5.952347 AGTATGAGTGTATGACTGAAGACCA 59.048 40.000 0.00 0.00 33.83 4.02
4332 4684 6.379988 AGGTTTTCAAAACACCAAGTATGAGT 59.620 34.615 14.92 0.00 32.43 3.41
4341 4693 5.474825 GACTTTCAGGTTTTCAAAACACCA 58.525 37.500 14.92 0.00 32.43 4.17
4346 4698 6.039616 CGAATGGACTTTCAGGTTTTCAAAA 58.960 36.000 0.00 0.00 0.00 2.44
4365 4717 1.209504 TGGAGAGGCCCTAAACGAATG 59.790 52.381 0.00 0.00 34.97 2.67
4366 4718 1.580059 TGGAGAGGCCCTAAACGAAT 58.420 50.000 0.00 0.00 34.97 3.34
4379 4731 2.124507 TTTGAGGGGGCGTTGGAGAG 62.125 60.000 0.00 0.00 0.00 3.20
4387 4739 2.199652 TGCAAGTTTTGAGGGGGCG 61.200 57.895 0.00 0.00 0.00 6.13
4391 4743 5.990996 ACAAATAATGTGCAAGTTTTGAGGG 59.009 36.000 12.81 0.00 41.93 4.30
4392 4744 7.109006 GACAAATAATGTGCAAGTTTTGAGG 57.891 36.000 12.81 0.00 44.12 3.86
4417 4771 1.869767 GCTCCCTTATTCATGTCAGCG 59.130 52.381 0.00 0.00 0.00 5.18
4419 4773 3.118112 ACCTGCTCCCTTATTCATGTCAG 60.118 47.826 0.00 0.00 0.00 3.51
4420 4774 2.846206 ACCTGCTCCCTTATTCATGTCA 59.154 45.455 0.00 0.00 0.00 3.58
4427 4781 4.385310 GGTTGTATGACCTGCTCCCTTATT 60.385 45.833 0.00 0.00 36.73 1.40
4431 4785 0.912486 GGTTGTATGACCTGCTCCCT 59.088 55.000 0.00 0.00 36.73 4.20
4434 4788 4.319177 GGATATGGTTGTATGACCTGCTC 58.681 47.826 0.00 0.00 40.47 4.26
4438 4792 3.954662 AGGGGATATGGTTGTATGACCT 58.045 45.455 0.00 0.00 40.47 3.85
4443 4797 6.521770 CGGACATTTAGGGGATATGGTTGTAT 60.522 42.308 0.00 0.00 0.00 2.29
4445 4799 4.445735 CGGACATTTAGGGGATATGGTTGT 60.446 45.833 0.00 0.00 0.00 3.32
4453 4807 0.697854 AGGGCGGACATTTAGGGGAT 60.698 55.000 0.00 0.00 0.00 3.85
4474 4828 9.787435 TTAAGTAAGCAGACTTAAGATGGAAAA 57.213 29.630 10.09 0.00 43.62 2.29
4478 4832 8.669243 CCTTTTAAGTAAGCAGACTTAAGATGG 58.331 37.037 10.09 16.35 46.99 3.51
4479 4833 9.436957 TCCTTTTAAGTAAGCAGACTTAAGATG 57.563 33.333 10.09 8.65 46.99 2.90
4488 4842 9.998106 GGTATGATATCCTTTTAAGTAAGCAGA 57.002 33.333 0.00 0.00 0.00 4.26
4500 4854 9.359653 CCTCAAAGATTTGGTATGATATCCTTT 57.640 33.333 0.00 0.00 38.66 3.11
4501 4855 8.727149 TCCTCAAAGATTTGGTATGATATCCTT 58.273 33.333 0.00 0.00 38.66 3.36
4503 4857 8.160106 ACTCCTCAAAGATTTGGTATGATATCC 58.840 37.037 0.00 0.00 38.66 2.59
4504 4858 8.997323 CACTCCTCAAAGATTTGGTATGATATC 58.003 37.037 5.52 0.00 38.66 1.63
4509 4868 7.452880 TTTCACTCCTCAAAGATTTGGTATG 57.547 36.000 5.52 0.00 38.66 2.39
4545 4904 6.892658 ATGTTTACATTTGAACTACTGCCA 57.107 33.333 0.00 0.00 31.37 4.92
4546 4905 8.293867 TGTAATGTTTACATTTGAACTACTGCC 58.706 33.333 12.84 0.00 43.48 4.85
4547 4906 9.672086 TTGTAATGTTTACATTTGAACTACTGC 57.328 29.630 12.84 0.00 43.48 4.40
4599 4959 5.060940 GCACAAGTTGACTTCAAGTTTGAAC 59.939 40.000 10.54 3.94 44.53 3.18
4611 4971 3.232213 ACGATATCGCACAAGTTGACT 57.768 42.857 24.59 0.00 44.43 3.41
4612 4972 3.242248 GGTACGATATCGCACAAGTTGAC 59.758 47.826 25.57 6.81 44.43 3.18
4613 4973 3.119424 TGGTACGATATCGCACAAGTTGA 60.119 43.478 25.57 3.87 44.43 3.18
4614 4974 3.183754 TGGTACGATATCGCACAAGTTG 58.816 45.455 25.57 0.00 44.43 3.16
4615 4975 3.513680 TGGTACGATATCGCACAAGTT 57.486 42.857 25.57 8.76 44.43 2.66
4616 4976 3.513680 TTGGTACGATATCGCACAAGT 57.486 42.857 25.57 9.42 44.43 3.16
4617 4977 4.745125 AGATTTGGTACGATATCGCACAAG 59.255 41.667 25.57 1.57 44.43 3.16
4618 4978 4.689071 AGATTTGGTACGATATCGCACAA 58.311 39.130 25.57 22.22 44.43 3.33
4619 4979 4.316205 AGATTTGGTACGATATCGCACA 57.684 40.909 25.57 18.45 44.43 4.57
4620 4980 5.233476 TCAAAGATTTGGTACGATATCGCAC 59.767 40.000 24.59 21.30 39.68 5.34
4621 4981 5.353111 TCAAAGATTTGGTACGATATCGCA 58.647 37.500 24.59 9.78 39.68 5.10
4622 4982 5.690409 TCTCAAAGATTTGGTACGATATCGC 59.310 40.000 24.59 9.50 39.68 4.58
4623 4983 7.435488 ACTTCTCAAAGATTTGGTACGATATCG 59.565 37.037 23.18 23.18 40.81 2.92
4624 4984 8.543774 CACTTCTCAAAGATTTGGTACGATATC 58.456 37.037 5.52 0.98 38.66 1.63
4625 4985 8.258007 TCACTTCTCAAAGATTTGGTACGATAT 58.742 33.333 5.52 0.00 38.66 1.63
4626 4986 7.608153 TCACTTCTCAAAGATTTGGTACGATA 58.392 34.615 5.52 0.00 38.66 2.92
4627 4987 6.464222 TCACTTCTCAAAGATTTGGTACGAT 58.536 36.000 5.52 0.00 38.66 3.73
4628 4988 5.849510 TCACTTCTCAAAGATTTGGTACGA 58.150 37.500 5.52 0.00 38.66 3.43
4629 4989 6.539649 TTCACTTCTCAAAGATTTGGTACG 57.460 37.500 5.52 0.00 38.66 3.67
4630 4990 9.185192 CATTTTCACTTCTCAAAGATTTGGTAC 57.815 33.333 5.52 0.00 38.66 3.34
4631 4991 8.912988 ACATTTTCACTTCTCAAAGATTTGGTA 58.087 29.630 5.52 0.00 38.66 3.25
4632 4992 7.785033 ACATTTTCACTTCTCAAAGATTTGGT 58.215 30.769 5.52 0.00 38.66 3.67
4633 4993 8.652810 AACATTTTCACTTCTCAAAGATTTGG 57.347 30.769 5.52 0.00 38.66 3.28
4639 4999 9.853921 GCATTTTAACATTTTCACTTCTCAAAG 57.146 29.630 0.00 0.00 38.54 2.77
4640 5000 8.538856 CGCATTTTAACATTTTCACTTCTCAAA 58.461 29.630 0.00 0.00 0.00 2.69
4641 5001 7.168972 CCGCATTTTAACATTTTCACTTCTCAA 59.831 33.333 0.00 0.00 0.00 3.02
4642 5002 6.640499 CCGCATTTTAACATTTTCACTTCTCA 59.360 34.615 0.00 0.00 0.00 3.27
4643 5003 6.399986 GCCGCATTTTAACATTTTCACTTCTC 60.400 38.462 0.00 0.00 0.00 2.87
4644 5004 5.405269 GCCGCATTTTAACATTTTCACTTCT 59.595 36.000 0.00 0.00 0.00 2.85
4645 5005 5.176590 TGCCGCATTTTAACATTTTCACTTC 59.823 36.000 0.00 0.00 0.00 3.01
4646 5006 5.053145 TGCCGCATTTTAACATTTTCACTT 58.947 33.333 0.00 0.00 0.00 3.16
4647 5007 4.626042 TGCCGCATTTTAACATTTTCACT 58.374 34.783 0.00 0.00 0.00 3.41
4648 5008 4.981389 TGCCGCATTTTAACATTTTCAC 57.019 36.364 0.00 0.00 0.00 3.18
4649 5009 6.870965 ACTATTGCCGCATTTTAACATTTTCA 59.129 30.769 0.00 0.00 0.00 2.69
4650 5010 7.289587 ACTATTGCCGCATTTTAACATTTTC 57.710 32.000 0.00 0.00 0.00 2.29
4651 5011 7.386299 TGAACTATTGCCGCATTTTAACATTTT 59.614 29.630 0.00 0.00 0.00 1.82
4652 5012 6.870965 TGAACTATTGCCGCATTTTAACATTT 59.129 30.769 0.00 0.00 0.00 2.32
4653 5013 6.393990 TGAACTATTGCCGCATTTTAACATT 58.606 32.000 0.00 0.00 0.00 2.71
4654 5014 5.960113 TGAACTATTGCCGCATTTTAACAT 58.040 33.333 0.00 0.00 0.00 2.71
4655 5015 5.378292 TGAACTATTGCCGCATTTTAACA 57.622 34.783 0.00 0.00 0.00 2.41
4656 5016 6.698359 TTTGAACTATTGCCGCATTTTAAC 57.302 33.333 0.00 0.00 0.00 2.01
4657 5017 6.870965 ACATTTGAACTATTGCCGCATTTTAA 59.129 30.769 0.00 0.00 0.00 1.52
4658 5018 6.393990 ACATTTGAACTATTGCCGCATTTTA 58.606 32.000 0.00 0.00 0.00 1.52
4659 5019 5.237048 ACATTTGAACTATTGCCGCATTTT 58.763 33.333 0.00 0.00 0.00 1.82
4660 5020 4.819769 ACATTTGAACTATTGCCGCATTT 58.180 34.783 0.00 0.00 0.00 2.32
4661 5021 4.454728 ACATTTGAACTATTGCCGCATT 57.545 36.364 0.00 0.00 0.00 3.56
4662 5022 5.574891 TTACATTTGAACTATTGCCGCAT 57.425 34.783 0.00 0.00 0.00 4.73
4663 5023 5.378292 TTTACATTTGAACTATTGCCGCA 57.622 34.783 0.00 0.00 0.00 5.69
4664 5024 8.574196 AATATTTACATTTGAACTATTGCCGC 57.426 30.769 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.