Multiple sequence alignment - TraesCS1B01G232700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G232700 chr1B 100.000 3110 0 0 1 3110 418107801 418104692 0.000000e+00 5744.0
1 TraesCS1B01G232700 chr1D 89.434 2139 112 58 847 2927 308460566 308458484 0.000000e+00 2593.0
2 TraesCS1B01G232700 chr1D 95.580 362 15 1 202 563 308460941 308460581 2.080000e-161 579.0
3 TraesCS1B01G232700 chr1D 90.957 188 11 3 2926 3110 308458443 308458259 6.660000e-62 248.0
4 TraesCS1B01G232700 chr1A 92.279 1606 65 28 837 2418 387841933 387840363 0.000000e+00 2224.0
5 TraesCS1B01G232700 chr1A 87.436 390 31 10 190 563 387842318 387841931 1.710000e-117 433.0
6 TraesCS1B01G232700 chr1A 81.982 444 24 27 2529 2927 387840241 387839809 2.990000e-85 326.0
7 TraesCS1B01G232700 chr1A 96.104 77 3 0 2448 2524 387840365 387840289 3.260000e-25 126.0
8 TraesCS1B01G232700 chr6B 99.643 280 1 0 560 839 680301076 680300797 2.140000e-141 512.0
9 TraesCS1B01G232700 chr5A 99.643 280 1 0 561 840 151259435 151259714 2.140000e-141 512.0
10 TraesCS1B01G232700 chr5A 82.759 203 20 8 1781 1983 448091108 448091295 1.920000e-37 167.0
11 TraesCS1B01G232700 chr5A 90.588 85 8 0 1497 1581 448090731 448090815 2.530000e-21 113.0
12 TraesCS1B01G232700 chr2B 99.643 280 1 0 560 839 620221272 620221551 2.140000e-141 512.0
13 TraesCS1B01G232700 chr2B 99.642 279 1 0 561 839 81319070 81318792 7.690000e-141 510.0
14 TraesCS1B01G232700 chr7B 99.642 279 1 0 561 839 388157452 388157174 7.690000e-141 510.0
15 TraesCS1B01G232700 chr2A 99.642 279 1 0 561 839 621271652 621271930 7.690000e-141 510.0
16 TraesCS1B01G232700 chr2A 99.642 279 1 0 561 839 773800401 773800679 7.690000e-141 510.0
17 TraesCS1B01G232700 chr2A 86.567 201 18 5 1781 1981 672415937 672416128 2.430000e-51 213.0
18 TraesCS1B01G232700 chr3A 98.947 285 2 1 560 844 24896945 24896662 2.770000e-140 508.0
19 TraesCS1B01G232700 chr7A 97.952 293 5 1 545 837 529331809 529331518 9.950000e-140 507.0
20 TraesCS1B01G232700 chr7A 81.119 286 46 7 1700 1984 48526185 48526463 4.040000e-54 222.0
21 TraesCS1B01G232700 chr7A 79.443 287 51 7 1699 1984 48715868 48716147 2.450000e-46 196.0
22 TraesCS1B01G232700 chr7A 84.343 198 31 0 1700 1897 48756250 48756447 8.800000e-46 195.0
23 TraesCS1B01G232700 chr4A 81.379 290 40 12 1700 1986 660654523 660654801 1.120000e-54 224.0
24 TraesCS1B01G232700 chr4A 80.634 284 49 4 1700 1983 660624975 660625252 6.750000e-52 215.0
25 TraesCS1B01G232700 chr4A 80.070 286 49 6 1700 1984 660452663 660452941 4.070000e-49 206.0
26 TraesCS1B01G232700 chr4A 85.227 88 13 0 1497 1584 56144290 56144377 1.190000e-14 91.6
27 TraesCS1B01G232700 chr7D 80.623 289 48 6 1700 1987 46711921 46711640 1.880000e-52 217.0
28 TraesCS1B01G232700 chr7D 81.967 122 19 1 1450 1571 46712127 46712009 1.970000e-17 100.0
29 TraesCS1B01G232700 chr2D 86.567 201 18 5 1781 1981 527547521 527547712 2.430000e-51 213.0
30 TraesCS1B01G232700 chr5D 82.266 203 21 7 1781 1983 344399998 344400185 8.930000e-36 161.0
31 TraesCS1B01G232700 chr5D 86.667 105 14 0 1477 1581 344399602 344399706 1.960000e-22 117.0
32 TraesCS1B01G232700 chr5B 88.542 96 11 0 1486 1581 407817609 407817514 1.960000e-22 117.0
33 TraesCS1B01G232700 chr4D 86.364 88 12 0 1497 1584 398669606 398669693 2.550000e-16 97.1
34 TraesCS1B01G232700 chr4B 85.227 88 13 0 1497 1584 491464688 491464775 1.190000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G232700 chr1B 418104692 418107801 3109 True 5744.00 5744 100.000000 1 3110 1 chr1B.!!$R1 3109
1 TraesCS1B01G232700 chr1D 308458259 308460941 2682 True 1140.00 2593 91.990333 202 3110 3 chr1D.!!$R1 2908
2 TraesCS1B01G232700 chr1A 387839809 387842318 2509 True 777.25 2224 89.450250 190 2927 4 chr1A.!!$R1 2737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.032615 AGATCGAGCAAGAGGGACCT 60.033 55.0 2.38 0.0 0.0 3.85 F
836 860 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.0 0.00 0.0 0.0 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 1742 0.534877 TGCTTCTGGTGCATCAACGT 60.535 50.0 0.00 0.00 35.31 3.99 R
2170 2227 0.038892 CAAGTTGCACCACTGGATGC 60.039 55.0 0.71 8.69 42.40 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.351276 GTGTGGAGGGCACGGAAT 59.649 61.111 0.00 0.00 0.00 3.01
21 22 1.303317 GTGTGGAGGGCACGGAATT 60.303 57.895 0.00 0.00 0.00 2.17
22 23 1.303236 TGTGGAGGGCACGGAATTG 60.303 57.895 0.00 0.00 0.00 2.32
23 24 1.303317 GTGGAGGGCACGGAATTGT 60.303 57.895 0.00 0.00 0.00 2.71
27 28 2.506231 TGGAGGGCACGGAATTGTAATA 59.494 45.455 0.00 0.00 0.00 0.98
28 29 3.139077 GGAGGGCACGGAATTGTAATAG 58.861 50.000 0.00 0.00 0.00 1.73
29 30 3.139077 GAGGGCACGGAATTGTAATAGG 58.861 50.000 0.00 0.00 0.00 2.57
30 31 2.508300 AGGGCACGGAATTGTAATAGGT 59.492 45.455 0.00 0.00 0.00 3.08
31 32 3.053917 AGGGCACGGAATTGTAATAGGTT 60.054 43.478 0.00 0.00 0.00 3.50
32 33 3.066203 GGGCACGGAATTGTAATAGGTTG 59.934 47.826 0.00 0.00 0.00 3.77
33 34 3.942748 GGCACGGAATTGTAATAGGTTGA 59.057 43.478 0.00 0.00 0.00 3.18
34 35 4.201881 GGCACGGAATTGTAATAGGTTGAC 60.202 45.833 0.00 0.00 0.00 3.18
35 36 4.634443 GCACGGAATTGTAATAGGTTGACT 59.366 41.667 0.00 0.00 0.00 3.41
36 37 5.220605 GCACGGAATTGTAATAGGTTGACTC 60.221 44.000 0.00 0.00 0.00 3.36
37 38 6.106673 CACGGAATTGTAATAGGTTGACTCT 58.893 40.000 0.00 0.00 0.00 3.24
38 39 6.255887 CACGGAATTGTAATAGGTTGACTCTC 59.744 42.308 0.00 0.00 0.00 3.20
39 40 6.154706 ACGGAATTGTAATAGGTTGACTCTCT 59.845 38.462 0.00 0.00 0.00 3.10
40 41 7.042335 CGGAATTGTAATAGGTTGACTCTCTT 58.958 38.462 0.00 0.00 0.00 2.85
41 42 7.549488 CGGAATTGTAATAGGTTGACTCTCTTT 59.451 37.037 0.00 0.00 0.00 2.52
42 43 8.884726 GGAATTGTAATAGGTTGACTCTCTTTC 58.115 37.037 0.00 0.00 0.00 2.62
43 44 9.660180 GAATTGTAATAGGTTGACTCTCTTTCT 57.340 33.333 0.00 0.00 0.00 2.52
44 45 9.660180 AATTGTAATAGGTTGACTCTCTTTCTC 57.340 33.333 0.00 0.00 0.00 2.87
45 46 6.853720 TGTAATAGGTTGACTCTCTTTCTCG 58.146 40.000 0.00 0.00 0.00 4.04
46 47 6.657966 TGTAATAGGTTGACTCTCTTTCTCGA 59.342 38.462 0.00 0.00 0.00 4.04
47 48 6.591750 AATAGGTTGACTCTCTTTCTCGAA 57.408 37.500 0.00 0.00 0.00 3.71
48 49 6.783708 ATAGGTTGACTCTCTTTCTCGAAT 57.216 37.500 0.00 0.00 0.00 3.34
49 50 5.066968 AGGTTGACTCTCTTTCTCGAATC 57.933 43.478 0.00 0.00 0.00 2.52
50 51 4.081917 AGGTTGACTCTCTTTCTCGAATCC 60.082 45.833 0.00 0.00 0.00 3.01
51 52 4.177783 GTTGACTCTCTTTCTCGAATCCC 58.822 47.826 0.00 0.00 0.00 3.85
52 53 2.761208 TGACTCTCTTTCTCGAATCCCC 59.239 50.000 0.00 0.00 0.00 4.81
53 54 2.101750 GACTCTCTTTCTCGAATCCCCC 59.898 54.545 0.00 0.00 0.00 5.40
54 55 2.292587 ACTCTCTTTCTCGAATCCCCCT 60.293 50.000 0.00 0.00 0.00 4.79
55 56 2.364002 CTCTCTTTCTCGAATCCCCCTC 59.636 54.545 0.00 0.00 0.00 4.30
56 57 1.414550 CTCTTTCTCGAATCCCCCTCC 59.585 57.143 0.00 0.00 0.00 4.30
57 58 0.470341 CTTTCTCGAATCCCCCTCCC 59.530 60.000 0.00 0.00 0.00 4.30
58 59 0.986550 TTTCTCGAATCCCCCTCCCC 60.987 60.000 0.00 0.00 0.00 4.81
59 60 2.849646 CTCGAATCCCCCTCCCCC 60.850 72.222 0.00 0.00 0.00 5.40
60 61 3.373846 TCGAATCCCCCTCCCCCT 61.374 66.667 0.00 0.00 0.00 4.79
61 62 3.171388 CGAATCCCCCTCCCCCTG 61.171 72.222 0.00 0.00 0.00 4.45
62 63 3.502875 GAATCCCCCTCCCCCTGC 61.503 72.222 0.00 0.00 0.00 4.85
67 68 4.109656 CCCCTCCCCCTGCCTACT 62.110 72.222 0.00 0.00 0.00 2.57
68 69 2.770048 CCCTCCCCCTGCCTACTG 60.770 72.222 0.00 0.00 0.00 2.74
69 70 2.041265 CCTCCCCCTGCCTACTGT 59.959 66.667 0.00 0.00 0.00 3.55
70 71 1.313475 CCTCCCCCTGCCTACTGTA 59.687 63.158 0.00 0.00 0.00 2.74
71 72 0.104934 CCTCCCCCTGCCTACTGTAT 60.105 60.000 0.00 0.00 0.00 2.29
72 73 1.343069 CTCCCCCTGCCTACTGTATC 58.657 60.000 0.00 0.00 0.00 2.24
73 74 0.105142 TCCCCCTGCCTACTGTATCC 60.105 60.000 0.00 0.00 0.00 2.59
74 75 0.104934 CCCCCTGCCTACTGTATCCT 60.105 60.000 0.00 0.00 0.00 3.24
75 76 1.695989 CCCCCTGCCTACTGTATCCTT 60.696 57.143 0.00 0.00 0.00 3.36
76 77 2.127708 CCCCTGCCTACTGTATCCTTT 58.872 52.381 0.00 0.00 0.00 3.11
77 78 2.509964 CCCCTGCCTACTGTATCCTTTT 59.490 50.000 0.00 0.00 0.00 2.27
78 79 3.433740 CCCCTGCCTACTGTATCCTTTTC 60.434 52.174 0.00 0.00 0.00 2.29
79 80 3.456277 CCCTGCCTACTGTATCCTTTTCT 59.544 47.826 0.00 0.00 0.00 2.52
80 81 4.443598 CCCTGCCTACTGTATCCTTTTCTC 60.444 50.000 0.00 0.00 0.00 2.87
81 82 4.443598 CCTGCCTACTGTATCCTTTTCTCC 60.444 50.000 0.00 0.00 0.00 3.71
82 83 4.362677 TGCCTACTGTATCCTTTTCTCCT 58.637 43.478 0.00 0.00 0.00 3.69
83 84 4.406003 TGCCTACTGTATCCTTTTCTCCTC 59.594 45.833 0.00 0.00 0.00 3.71
84 85 4.202274 GCCTACTGTATCCTTTTCTCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
85 86 4.345547 CCTACTGTATCCTTTTCTCCTCCC 59.654 50.000 0.00 0.00 0.00 4.30
86 87 2.766828 ACTGTATCCTTTTCTCCTCCCG 59.233 50.000 0.00 0.00 0.00 5.14
87 88 3.031736 CTGTATCCTTTTCTCCTCCCGA 58.968 50.000 0.00 0.00 0.00 5.14
88 89 3.643792 CTGTATCCTTTTCTCCTCCCGAT 59.356 47.826 0.00 0.00 0.00 4.18
89 90 3.641906 TGTATCCTTTTCTCCTCCCGATC 59.358 47.826 0.00 0.00 0.00 3.69
90 91 1.497161 TCCTTTTCTCCTCCCGATCC 58.503 55.000 0.00 0.00 0.00 3.36
91 92 0.470341 CCTTTTCTCCTCCCGATCCC 59.530 60.000 0.00 0.00 0.00 3.85
92 93 0.470341 CTTTTCTCCTCCCGATCCCC 59.530 60.000 0.00 0.00 0.00 4.81
93 94 0.044244 TTTTCTCCTCCCGATCCCCT 59.956 55.000 0.00 0.00 0.00 4.79
94 95 0.044244 TTTCTCCTCCCGATCCCCTT 59.956 55.000 0.00 0.00 0.00 3.95
95 96 0.044244 TTCTCCTCCCGATCCCCTTT 59.956 55.000 0.00 0.00 0.00 3.11
96 97 0.398664 TCTCCTCCCGATCCCCTTTC 60.399 60.000 0.00 0.00 0.00 2.62
97 98 0.399233 CTCCTCCCGATCCCCTTTCT 60.399 60.000 0.00 0.00 0.00 2.52
98 99 0.938945 TCCTCCCGATCCCCTTTCTA 59.061 55.000 0.00 0.00 0.00 2.10
99 100 1.049402 CCTCCCGATCCCCTTTCTAC 58.951 60.000 0.00 0.00 0.00 2.59
100 101 1.413227 CCTCCCGATCCCCTTTCTACT 60.413 57.143 0.00 0.00 0.00 2.57
101 102 1.964933 CTCCCGATCCCCTTTCTACTC 59.035 57.143 0.00 0.00 0.00 2.59
102 103 1.574339 TCCCGATCCCCTTTCTACTCT 59.426 52.381 0.00 0.00 0.00 3.24
103 104 1.689273 CCCGATCCCCTTTCTACTCTG 59.311 57.143 0.00 0.00 0.00 3.35
104 105 1.689273 CCGATCCCCTTTCTACTCTGG 59.311 57.143 0.00 0.00 0.00 3.86
105 106 2.667470 CGATCCCCTTTCTACTCTGGA 58.333 52.381 0.00 0.00 0.00 3.86
106 107 3.031736 CGATCCCCTTTCTACTCTGGAA 58.968 50.000 0.00 0.00 0.00 3.53
107 108 3.181474 CGATCCCCTTTCTACTCTGGAAC 60.181 52.174 0.00 0.00 0.00 3.62
108 109 2.547990 TCCCCTTTCTACTCTGGAACC 58.452 52.381 0.00 0.00 0.00 3.62
109 110 1.560146 CCCCTTTCTACTCTGGAACCC 59.440 57.143 0.00 0.00 0.00 4.11
110 111 2.552367 CCCTTTCTACTCTGGAACCCT 58.448 52.381 0.00 0.00 0.00 4.34
111 112 3.568109 CCCCTTTCTACTCTGGAACCCTA 60.568 52.174 0.00 0.00 0.00 3.53
112 113 3.707102 CCCTTTCTACTCTGGAACCCTAG 59.293 52.174 0.00 0.00 0.00 3.02
113 114 3.133183 CCTTTCTACTCTGGAACCCTAGC 59.867 52.174 0.00 0.00 0.00 3.42
114 115 3.759815 TTCTACTCTGGAACCCTAGCT 57.240 47.619 0.00 0.00 0.00 3.32
115 116 4.875578 TTCTACTCTGGAACCCTAGCTA 57.124 45.455 0.00 0.00 0.00 3.32
116 117 4.167652 TCTACTCTGGAACCCTAGCTAC 57.832 50.000 0.00 0.00 0.00 3.58
117 118 2.162264 ACTCTGGAACCCTAGCTACC 57.838 55.000 0.00 0.00 0.00 3.18
118 119 1.361543 ACTCTGGAACCCTAGCTACCA 59.638 52.381 0.00 0.00 0.00 3.25
119 120 2.225547 ACTCTGGAACCCTAGCTACCAA 60.226 50.000 2.05 0.00 0.00 3.67
120 121 3.041946 CTCTGGAACCCTAGCTACCAAT 58.958 50.000 2.05 0.00 0.00 3.16
121 122 3.456277 CTCTGGAACCCTAGCTACCAATT 59.544 47.826 2.05 0.00 0.00 2.32
122 123 3.850173 TCTGGAACCCTAGCTACCAATTT 59.150 43.478 2.05 0.00 0.00 1.82
123 124 4.080526 TCTGGAACCCTAGCTACCAATTTC 60.081 45.833 2.05 0.00 0.00 2.17
124 125 3.053917 TGGAACCCTAGCTACCAATTTCC 60.054 47.826 0.00 3.53 33.29 3.13
125 126 3.552875 GAACCCTAGCTACCAATTTCCC 58.447 50.000 0.00 0.00 0.00 3.97
126 127 1.850998 ACCCTAGCTACCAATTTCCCC 59.149 52.381 0.00 0.00 0.00 4.81
127 128 2.136026 CCCTAGCTACCAATTTCCCCT 58.864 52.381 0.00 0.00 0.00 4.79
128 129 2.158608 CCCTAGCTACCAATTTCCCCTG 60.159 54.545 0.00 0.00 0.00 4.45
129 130 2.509964 CCTAGCTACCAATTTCCCCTGT 59.490 50.000 0.00 0.00 0.00 4.00
130 131 3.714798 CCTAGCTACCAATTTCCCCTGTA 59.285 47.826 0.00 0.00 0.00 2.74
131 132 4.351111 CCTAGCTACCAATTTCCCCTGTAT 59.649 45.833 0.00 0.00 0.00 2.29
132 133 4.439253 AGCTACCAATTTCCCCTGTATC 57.561 45.455 0.00 0.00 0.00 2.24
133 134 3.139077 GCTACCAATTTCCCCTGTATCG 58.861 50.000 0.00 0.00 0.00 2.92
134 135 2.052782 ACCAATTTCCCCTGTATCGC 57.947 50.000 0.00 0.00 0.00 4.58
135 136 1.318576 CCAATTTCCCCTGTATCGCC 58.681 55.000 0.00 0.00 0.00 5.54
136 137 1.409521 CCAATTTCCCCTGTATCGCCA 60.410 52.381 0.00 0.00 0.00 5.69
137 138 2.586425 CAATTTCCCCTGTATCGCCAT 58.414 47.619 0.00 0.00 0.00 4.40
138 139 3.497763 CCAATTTCCCCTGTATCGCCATA 60.498 47.826 0.00 0.00 0.00 2.74
139 140 4.141287 CAATTTCCCCTGTATCGCCATAA 58.859 43.478 0.00 0.00 0.00 1.90
140 141 4.657814 ATTTCCCCTGTATCGCCATAAT 57.342 40.909 0.00 0.00 0.00 1.28
141 142 4.447138 TTTCCCCTGTATCGCCATAATT 57.553 40.909 0.00 0.00 0.00 1.40
142 143 3.417069 TCCCCTGTATCGCCATAATTG 57.583 47.619 0.00 0.00 0.00 2.32
143 144 2.976185 TCCCCTGTATCGCCATAATTGA 59.024 45.455 0.00 0.00 0.00 2.57
144 145 3.007940 TCCCCTGTATCGCCATAATTGAG 59.992 47.826 0.00 0.00 0.00 3.02
145 146 3.244561 CCCCTGTATCGCCATAATTGAGT 60.245 47.826 0.00 0.00 0.00 3.41
146 147 4.020573 CCCCTGTATCGCCATAATTGAGTA 60.021 45.833 0.00 0.00 0.00 2.59
147 148 5.171476 CCCTGTATCGCCATAATTGAGTAG 58.829 45.833 0.00 0.00 0.00 2.57
148 149 5.047306 CCCTGTATCGCCATAATTGAGTAGA 60.047 44.000 0.00 0.00 0.00 2.59
149 150 6.351371 CCCTGTATCGCCATAATTGAGTAGAT 60.351 42.308 0.00 0.00 0.00 1.98
150 151 6.754209 CCTGTATCGCCATAATTGAGTAGATC 59.246 42.308 0.00 0.00 0.00 2.75
151 152 6.322491 TGTATCGCCATAATTGAGTAGATCG 58.678 40.000 0.00 0.00 0.00 3.69
152 153 5.644977 ATCGCCATAATTGAGTAGATCGA 57.355 39.130 0.00 0.00 0.00 3.59
153 154 5.048153 TCGCCATAATTGAGTAGATCGAG 57.952 43.478 0.00 0.00 0.00 4.04
154 155 3.610242 CGCCATAATTGAGTAGATCGAGC 59.390 47.826 0.00 0.00 0.00 5.03
155 156 4.560128 GCCATAATTGAGTAGATCGAGCA 58.440 43.478 2.38 0.00 0.00 4.26
156 157 4.991056 GCCATAATTGAGTAGATCGAGCAA 59.009 41.667 2.38 0.00 0.00 3.91
157 158 5.119898 GCCATAATTGAGTAGATCGAGCAAG 59.880 44.000 2.38 0.00 0.00 4.01
158 159 6.450545 CCATAATTGAGTAGATCGAGCAAGA 58.549 40.000 2.38 0.00 0.00 3.02
159 160 6.585702 CCATAATTGAGTAGATCGAGCAAGAG 59.414 42.308 2.38 0.00 0.00 2.85
160 161 4.582701 ATTGAGTAGATCGAGCAAGAGG 57.417 45.455 2.38 0.00 0.00 3.69
161 162 2.302260 TGAGTAGATCGAGCAAGAGGG 58.698 52.381 2.38 0.00 0.00 4.30
162 163 2.092375 TGAGTAGATCGAGCAAGAGGGA 60.092 50.000 2.38 0.00 0.00 4.20
163 164 2.292292 GAGTAGATCGAGCAAGAGGGAC 59.708 54.545 2.38 0.00 0.00 4.46
164 165 1.338655 GTAGATCGAGCAAGAGGGACC 59.661 57.143 2.38 0.00 0.00 4.46
165 166 0.032615 AGATCGAGCAAGAGGGACCT 60.033 55.000 2.38 0.00 0.00 3.85
166 167 1.215673 AGATCGAGCAAGAGGGACCTA 59.784 52.381 2.38 0.00 0.00 3.08
167 168 2.032620 GATCGAGCAAGAGGGACCTAA 58.967 52.381 0.00 0.00 0.00 2.69
168 169 1.183549 TCGAGCAAGAGGGACCTAAC 58.816 55.000 0.00 0.00 0.00 2.34
169 170 0.895530 CGAGCAAGAGGGACCTAACA 59.104 55.000 0.00 0.00 0.00 2.41
170 171 1.275291 CGAGCAAGAGGGACCTAACAA 59.725 52.381 0.00 0.00 0.00 2.83
171 172 2.093447 CGAGCAAGAGGGACCTAACAAT 60.093 50.000 0.00 0.00 0.00 2.71
172 173 3.536570 GAGCAAGAGGGACCTAACAATC 58.463 50.000 0.00 0.00 0.00 2.67
173 174 3.185455 AGCAAGAGGGACCTAACAATCT 58.815 45.455 0.00 0.00 0.00 2.40
174 175 4.362677 AGCAAGAGGGACCTAACAATCTA 58.637 43.478 0.00 0.00 0.00 1.98
175 176 4.162509 AGCAAGAGGGACCTAACAATCTAC 59.837 45.833 0.00 0.00 0.00 2.59
176 177 4.162509 GCAAGAGGGACCTAACAATCTACT 59.837 45.833 0.00 0.00 0.00 2.57
177 178 5.665459 CAAGAGGGACCTAACAATCTACTG 58.335 45.833 0.00 0.00 0.00 2.74
178 179 3.707102 AGAGGGACCTAACAATCTACTGC 59.293 47.826 0.00 0.00 0.00 4.40
179 180 3.450904 AGGGACCTAACAATCTACTGCA 58.549 45.455 0.00 0.00 0.00 4.41
180 181 4.040755 AGGGACCTAACAATCTACTGCAT 58.959 43.478 0.00 0.00 0.00 3.96
181 182 4.475016 AGGGACCTAACAATCTACTGCATT 59.525 41.667 0.00 0.00 0.00 3.56
182 183 5.044846 AGGGACCTAACAATCTACTGCATTT 60.045 40.000 0.00 0.00 0.00 2.32
183 184 5.652452 GGGACCTAACAATCTACTGCATTTT 59.348 40.000 0.00 0.00 0.00 1.82
184 185 6.826741 GGGACCTAACAATCTACTGCATTTTA 59.173 38.462 0.00 0.00 0.00 1.52
185 186 7.338449 GGGACCTAACAATCTACTGCATTTTAA 59.662 37.037 0.00 0.00 0.00 1.52
186 187 8.398665 GGACCTAACAATCTACTGCATTTTAAG 58.601 37.037 0.00 0.00 0.00 1.85
187 188 8.863872 ACCTAACAATCTACTGCATTTTAAGT 57.136 30.769 0.00 0.00 0.00 2.24
188 189 9.297037 ACCTAACAATCTACTGCATTTTAAGTT 57.703 29.630 0.00 0.00 0.00 2.66
248 249 5.980715 AGATTCGTGCAAATAAAACGGTTTT 59.019 32.000 21.20 21.20 37.87 2.43
258 259 7.736880 GCAAATAAAACGGTTTTAAACGGATTC 59.263 33.333 24.89 9.35 38.48 2.52
339 340 0.396811 GGGTATCACCATCGGGGAAG 59.603 60.000 0.84 0.00 39.25 3.46
499 523 1.004745 TGACCAGCTTTCTCCATTCCC 59.995 52.381 0.00 0.00 0.00 3.97
536 560 7.545615 CCCACAAATTAAACTATTCTTGCTTCC 59.454 37.037 0.00 0.00 0.00 3.46
537 561 7.273381 CCACAAATTAAACTATTCTTGCTTCCG 59.727 37.037 0.00 0.00 0.00 4.30
539 563 8.573035 ACAAATTAAACTATTCTTGCTTCCGAA 58.427 29.630 0.00 0.00 0.00 4.30
561 585 6.761242 CGAACTCAATCACCACTCCATAATTA 59.239 38.462 0.00 0.00 0.00 1.40
562 586 7.279981 CGAACTCAATCACCACTCCATAATTAA 59.720 37.037 0.00 0.00 0.00 1.40
563 587 8.511604 AACTCAATCACCACTCCATAATTAAG 57.488 34.615 0.00 0.00 0.00 1.85
564 588 7.056635 ACTCAATCACCACTCCATAATTAAGG 58.943 38.462 0.00 0.00 0.00 2.69
565 589 5.827797 TCAATCACCACTCCATAATTAAGGC 59.172 40.000 1.68 0.00 0.00 4.35
566 590 5.653255 ATCACCACTCCATAATTAAGGCT 57.347 39.130 1.68 0.00 0.00 4.58
567 591 4.780815 TCACCACTCCATAATTAAGGCTG 58.219 43.478 1.68 0.57 0.00 4.85
568 592 3.885297 CACCACTCCATAATTAAGGCTGG 59.115 47.826 16.15 16.15 0.00 4.85
569 593 3.527665 ACCACTCCATAATTAAGGCTGGT 59.472 43.478 17.07 17.07 33.36 4.00
570 594 4.137543 CCACTCCATAATTAAGGCTGGTC 58.862 47.826 12.09 0.00 0.00 4.02
571 595 4.385199 CCACTCCATAATTAAGGCTGGTCA 60.385 45.833 12.09 0.00 0.00 4.02
572 596 5.380043 CACTCCATAATTAAGGCTGGTCAT 58.620 41.667 1.68 0.00 0.00 3.06
573 597 6.465751 CCACTCCATAATTAAGGCTGGTCATA 60.466 42.308 12.09 0.00 0.00 2.15
574 598 6.652481 CACTCCATAATTAAGGCTGGTCATAG 59.348 42.308 1.68 0.00 0.00 2.23
575 599 6.330250 ACTCCATAATTAAGGCTGGTCATAGT 59.670 38.462 1.68 0.00 0.00 2.12
576 600 6.533730 TCCATAATTAAGGCTGGTCATAGTG 58.466 40.000 1.68 0.00 0.00 2.74
577 601 5.707298 CCATAATTAAGGCTGGTCATAGTGG 59.293 44.000 0.00 0.00 0.00 4.00
578 602 3.864789 ATTAAGGCTGGTCATAGTGGG 57.135 47.619 0.00 0.00 0.00 4.61
579 603 1.507140 TAAGGCTGGTCATAGTGGGG 58.493 55.000 0.00 0.00 0.00 4.96
580 604 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
581 605 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
582 606 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
583 607 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
584 608 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
585 609 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
586 610 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
587 611 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
588 612 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
589 613 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
590 614 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
591 615 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
592 616 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
593 617 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
594 618 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
595 619 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
596 620 6.649041 AGTGGGGAGTAACTTAGACTAGTA 57.351 41.667 0.00 0.00 0.00 1.82
597 621 7.037342 AGTGGGGAGTAACTTAGACTAGTAA 57.963 40.000 0.00 0.00 0.00 2.24
598 622 6.889177 AGTGGGGAGTAACTTAGACTAGTAAC 59.111 42.308 0.00 0.00 0.00 2.50
599 623 6.660949 GTGGGGAGTAACTTAGACTAGTAACA 59.339 42.308 0.00 0.00 0.00 2.41
600 624 7.341512 GTGGGGAGTAACTTAGACTAGTAACAT 59.658 40.741 0.00 0.00 0.00 2.71
601 625 8.560039 TGGGGAGTAACTTAGACTAGTAACATA 58.440 37.037 0.00 0.00 0.00 2.29
602 626 8.845227 GGGGAGTAACTTAGACTAGTAACATAC 58.155 40.741 0.00 0.00 0.00 2.39
603 627 9.401058 GGGAGTAACTTAGACTAGTAACATACA 57.599 37.037 0.00 0.00 0.00 2.29
632 656 9.964354 TGTTACTAGTCTATGTTACTACCTTCA 57.036 33.333 0.00 0.00 0.00 3.02
638 662 8.466617 AGTCTATGTTACTACCTTCATAGTGG 57.533 38.462 0.00 0.00 40.01 4.00
639 663 7.506261 AGTCTATGTTACTACCTTCATAGTGGG 59.494 40.741 0.00 0.00 40.01 4.61
640 664 7.287235 GTCTATGTTACTACCTTCATAGTGGGT 59.713 40.741 0.00 0.00 40.01 4.51
641 665 8.505246 TCTATGTTACTACCTTCATAGTGGGTA 58.495 37.037 0.00 0.00 40.01 3.69
646 670 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
647 671 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
648 672 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
649 673 5.525484 ACCTTCATAGTGGGTAGTGTCATA 58.475 41.667 0.00 0.00 0.00 2.15
650 674 5.598830 ACCTTCATAGTGGGTAGTGTCATAG 59.401 44.000 0.00 0.00 0.00 2.23
651 675 5.011125 CCTTCATAGTGGGTAGTGTCATAGG 59.989 48.000 0.00 0.00 0.00 2.57
652 676 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
653 677 6.270219 TCATAGTGGGTAGTGTCATAGGTA 57.730 41.667 0.00 0.00 0.00 3.08
654 678 6.860034 TCATAGTGGGTAGTGTCATAGGTAT 58.140 40.000 0.00 0.00 0.00 2.73
655 679 6.719829 TCATAGTGGGTAGTGTCATAGGTATG 59.280 42.308 0.00 0.00 35.04 2.39
656 680 4.223953 AGTGGGTAGTGTCATAGGTATGG 58.776 47.826 0.00 0.00 34.50 2.74
657 681 3.965347 GTGGGTAGTGTCATAGGTATGGT 59.035 47.826 0.00 0.00 34.50 3.55
658 682 5.103387 AGTGGGTAGTGTCATAGGTATGGTA 60.103 44.000 0.00 0.00 34.50 3.25
659 683 5.599656 GTGGGTAGTGTCATAGGTATGGTAA 59.400 44.000 0.00 0.00 34.50 2.85
660 684 5.599656 TGGGTAGTGTCATAGGTATGGTAAC 59.400 44.000 0.00 0.00 34.50 2.50
679 703 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
680 704 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
681 705 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
689 713 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
690 714 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
691 715 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
692 716 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
693 717 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
704 728 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
705 729 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
706 730 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
707 731 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
708 732 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
709 733 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
710 734 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
711 735 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
712 736 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
713 737 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
714 738 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
715 739 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
716 740 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
717 741 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
718 742 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
719 743 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
720 744 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
721 745 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
722 746 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
723 747 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
724 748 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
725 749 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
754 778 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
755 779 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
756 780 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
757 781 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
758 782 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
759 783 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
760 784 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
761 785 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
762 786 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
763 787 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
764 788 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
765 789 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
766 790 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
767 791 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
768 792 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
769 793 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
770 794 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
771 795 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
772 796 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
773 797 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
774 798 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
775 799 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
776 800 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
777 801 5.824624 CCTCATTAACTACTTGCCACATCAT 59.175 40.000 0.00 0.00 0.00 2.45
778 802 6.017605 CCTCATTAACTACTTGCCACATCATC 60.018 42.308 0.00 0.00 0.00 2.92
779 803 6.413892 TCATTAACTACTTGCCACATCATCA 58.586 36.000 0.00 0.00 0.00 3.07
780 804 7.056006 TCATTAACTACTTGCCACATCATCAT 58.944 34.615 0.00 0.00 0.00 2.45
781 805 7.557358 TCATTAACTACTTGCCACATCATCATT 59.443 33.333 0.00 0.00 0.00 2.57
782 806 7.701539 TTAACTACTTGCCACATCATCATTT 57.298 32.000 0.00 0.00 0.00 2.32
783 807 6.594788 AACTACTTGCCACATCATCATTTT 57.405 33.333 0.00 0.00 0.00 1.82
784 808 6.594788 ACTACTTGCCACATCATCATTTTT 57.405 33.333 0.00 0.00 0.00 1.94
785 809 6.392354 ACTACTTGCCACATCATCATTTTTG 58.608 36.000 0.00 0.00 0.00 2.44
786 810 3.998341 ACTTGCCACATCATCATTTTTGC 59.002 39.130 0.00 0.00 0.00 3.68
787 811 3.965379 TGCCACATCATCATTTTTGCT 57.035 38.095 0.00 0.00 0.00 3.91
788 812 4.274602 TGCCACATCATCATTTTTGCTT 57.725 36.364 0.00 0.00 0.00 3.91
789 813 5.402997 TGCCACATCATCATTTTTGCTTA 57.597 34.783 0.00 0.00 0.00 3.09
790 814 5.979993 TGCCACATCATCATTTTTGCTTAT 58.020 33.333 0.00 0.00 0.00 1.73
791 815 5.813157 TGCCACATCATCATTTTTGCTTATG 59.187 36.000 0.00 0.00 0.00 1.90
792 816 5.813672 GCCACATCATCATTTTTGCTTATGT 59.186 36.000 0.00 0.00 0.00 2.29
793 817 6.237996 GCCACATCATCATTTTTGCTTATGTG 60.238 38.462 0.00 0.00 41.50 3.21
794 818 7.229228 CACATCATCATTTTTGCTTATGTGG 57.771 36.000 0.00 0.00 39.34 4.17
795 819 5.813672 ACATCATCATTTTTGCTTATGTGGC 59.186 36.000 0.00 0.00 0.00 5.01
796 820 5.402997 TCATCATTTTTGCTTATGTGGCA 57.597 34.783 0.00 0.00 37.97 4.92
797 821 5.979993 TCATCATTTTTGCTTATGTGGCAT 58.020 33.333 0.00 0.00 39.54 4.40
798 822 6.044046 TCATCATTTTTGCTTATGTGGCATC 58.956 36.000 0.00 0.00 39.54 3.91
799 823 5.664294 TCATTTTTGCTTATGTGGCATCT 57.336 34.783 0.00 0.00 39.54 2.90
800 824 6.772360 TCATTTTTGCTTATGTGGCATCTA 57.228 33.333 0.00 0.00 39.54 1.98
801 825 7.350744 TCATTTTTGCTTATGTGGCATCTAT 57.649 32.000 0.00 0.00 39.54 1.98
802 826 7.204604 TCATTTTTGCTTATGTGGCATCTATG 58.795 34.615 0.00 0.00 39.54 2.23
803 827 6.528537 TTTTTGCTTATGTGGCATCTATGT 57.471 33.333 0.00 0.00 39.54 2.29
804 828 6.528537 TTTTGCTTATGTGGCATCTATGTT 57.471 33.333 0.00 0.00 39.54 2.71
805 829 7.637631 TTTTGCTTATGTGGCATCTATGTTA 57.362 32.000 0.00 0.00 39.54 2.41
806 830 6.618287 TTGCTTATGTGGCATCTATGTTAC 57.382 37.500 0.00 0.00 39.54 2.50
807 831 5.928976 TGCTTATGTGGCATCTATGTTACT 58.071 37.500 0.00 0.00 34.56 2.24
808 832 7.061566 TGCTTATGTGGCATCTATGTTACTA 57.938 36.000 0.00 0.00 34.56 1.82
809 833 6.929049 TGCTTATGTGGCATCTATGTTACTAC 59.071 38.462 0.00 0.00 34.56 2.73
810 834 6.369065 GCTTATGTGGCATCTATGTTACTACC 59.631 42.308 0.00 0.00 0.00 3.18
811 835 7.612065 TTATGTGGCATCTATGTTACTACCT 57.388 36.000 0.00 0.00 0.00 3.08
812 836 8.715190 TTATGTGGCATCTATGTTACTACCTA 57.285 34.615 0.00 0.00 0.00 3.08
813 837 7.798710 ATGTGGCATCTATGTTACTACCTAT 57.201 36.000 0.00 0.00 0.00 2.57
814 838 6.993079 TGTGGCATCTATGTTACTACCTATG 58.007 40.000 0.00 0.00 0.00 2.23
815 839 6.553476 TGTGGCATCTATGTTACTACCTATGT 59.447 38.462 0.00 0.00 0.00 2.29
816 840 7.070696 TGTGGCATCTATGTTACTACCTATGTT 59.929 37.037 0.00 0.00 0.00 2.71
817 841 8.582437 GTGGCATCTATGTTACTACCTATGTTA 58.418 37.037 0.00 0.00 0.00 2.41
818 842 8.582437 TGGCATCTATGTTACTACCTATGTTAC 58.418 37.037 0.00 0.00 0.00 2.50
819 843 8.804204 GGCATCTATGTTACTACCTATGTTACT 58.196 37.037 0.00 0.00 0.00 2.24
820 844 9.843334 GCATCTATGTTACTACCTATGTTACTC 57.157 37.037 0.00 0.00 0.00 2.59
822 846 8.930846 TCTATGTTACTACCTATGTTACTCCC 57.069 38.462 0.00 0.00 0.00 4.30
823 847 8.505246 TCTATGTTACTACCTATGTTACTCCCA 58.495 37.037 0.00 0.00 0.00 4.37
824 848 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
825 849 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
826 850 7.642186 TGTTACTACCTATGTTACTCCCACTA 58.358 38.462 0.00 0.00 0.00 2.74
827 851 8.284435 TGTTACTACCTATGTTACTCCCACTAT 58.716 37.037 0.00 0.00 0.00 2.12
828 852 8.574737 GTTACTACCTATGTTACTCCCACTATG 58.425 40.741 0.00 0.00 0.00 2.23
829 853 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
830 854 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
831 855 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
832 856 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
833 857 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
834 858 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
835 859 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
836 860 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
894 924 1.077169 CTCTTTAAAAGCCCACCCCCT 59.923 52.381 0.00 0.00 0.00 4.79
897 927 2.144859 TTAAAAGCCCACCCCCTCCG 62.145 60.000 0.00 0.00 0.00 4.63
927 961 0.250295 CACAATCCACGGTCACCAGT 60.250 55.000 0.00 0.00 0.00 4.00
964 998 3.304559 CGTACGTAGCTACTGTTACTCGT 59.695 47.826 21.20 13.53 0.00 4.18
1092 1126 1.515020 GCTCAGTCTCGGCATGTCT 59.485 57.895 0.00 0.00 0.00 3.41
1107 1141 0.250424 TGTCTGGTACGACGTCTCCA 60.250 55.000 14.70 19.03 35.36 3.86
1299 1345 2.879907 GGGATCGACGTCAACCGA 59.120 61.111 17.16 8.03 40.70 4.69
1672 1718 7.008941 CCAATATTTCTTCTTCCATCCATCCT 58.991 38.462 0.00 0.00 0.00 3.24
1679 1734 7.211897 TCTTCTTCCATCCATCCTAATTTGA 57.788 36.000 0.00 0.00 0.00 2.69
1687 1742 7.453439 TCCATCCATCCTAATTTGATCTACGTA 59.547 37.037 0.00 0.00 0.00 3.57
1696 1751 5.637104 ATTTGATCTACGTACGTTGATGC 57.363 39.130 37.49 28.83 39.80 3.91
1698 1753 3.431856 TGATCTACGTACGTTGATGCAC 58.568 45.455 37.49 26.73 39.80 4.57
2116 2171 2.915349 CCCAGAGGTCATGATGAACTG 58.085 52.381 19.14 16.05 45.99 3.16
2133 2188 4.923281 TGAACTGATTAGTGTGTCATGTCG 59.077 41.667 0.00 0.00 37.19 4.35
2136 2191 4.237724 CTGATTAGTGTGTCATGTCGTGT 58.762 43.478 0.00 0.00 0.00 4.49
2137 2192 4.234574 TGATTAGTGTGTCATGTCGTGTC 58.765 43.478 0.00 0.00 0.00 3.67
2138 2193 3.719173 TTAGTGTGTCATGTCGTGTCA 57.281 42.857 0.00 0.00 0.00 3.58
2170 2227 6.090088 GTCATGTGTTAGTGTTGAGAGCTTAG 59.910 42.308 0.00 0.00 0.00 2.18
2184 2241 0.677731 GCTTAGCATCCAGTGGTGCA 60.678 55.000 27.53 16.41 43.63 4.57
2205 2262 6.870965 GTGCAACTTGATGGAGTATCTATAGG 59.129 42.308 0.00 0.00 35.97 2.57
2206 2263 6.782494 TGCAACTTGATGGAGTATCTATAGGA 59.218 38.462 0.00 0.00 35.97 2.94
2207 2264 7.290014 TGCAACTTGATGGAGTATCTATAGGAA 59.710 37.037 0.00 0.00 35.97 3.36
2208 2265 7.816995 GCAACTTGATGGAGTATCTATAGGAAG 59.183 40.741 0.00 0.00 35.97 3.46
2209 2266 9.083422 CAACTTGATGGAGTATCTATAGGAAGA 57.917 37.037 0.00 0.00 35.97 2.87
2210 2267 9.661954 AACTTGATGGAGTATCTATAGGAAGAA 57.338 33.333 0.00 0.00 35.97 2.52
2211 2268 9.084533 ACTTGATGGAGTATCTATAGGAAGAAC 57.915 37.037 0.00 0.00 35.97 3.01
2212 2269 9.308000 CTTGATGGAGTATCTATAGGAAGAACT 57.692 37.037 0.00 0.00 35.97 3.01
2242 2299 5.712917 ACAGGCATAGTAACTAGGATAGCTC 59.287 44.000 0.00 0.00 44.39 4.09
2259 2320 1.654602 GCTCGCGAAAGAGAAGTAACC 59.345 52.381 11.33 0.00 40.10 2.85
2292 2353 9.362151 AGGATCCTGTTTTCTTTTGTTTATACA 57.638 29.630 15.29 0.00 0.00 2.29
2293 2354 9.626045 GGATCCTGTTTTCTTTTGTTTATACAG 57.374 33.333 3.84 0.00 35.28 2.74
2430 2494 3.379372 GCATACAAATCAGCTCACCATGT 59.621 43.478 0.00 0.00 0.00 3.21
2436 2500 4.558226 AATCAGCTCACCATGTCTTGTA 57.442 40.909 0.00 0.00 0.00 2.41
2437 2501 3.319137 TCAGCTCACCATGTCTTGTAC 57.681 47.619 0.00 0.00 0.00 2.90
2439 2503 3.324846 TCAGCTCACCATGTCTTGTACTT 59.675 43.478 0.00 0.00 0.00 2.24
2441 2505 3.580458 AGCTCACCATGTCTTGTACTTCT 59.420 43.478 0.00 0.00 0.00 2.85
2442 2506 4.772624 AGCTCACCATGTCTTGTACTTCTA 59.227 41.667 0.00 0.00 0.00 2.10
2443 2507 4.865365 GCTCACCATGTCTTGTACTTCTAC 59.135 45.833 0.00 0.00 0.00 2.59
2445 2509 5.779922 TCACCATGTCTTGTACTTCTACAC 58.220 41.667 0.00 0.00 32.28 2.90
2446 2510 4.621460 CACCATGTCTTGTACTTCTACACG 59.379 45.833 0.00 0.00 32.28 4.49
2490 2575 2.806244 ACGAGTGAGGCATGTGTTTTAC 59.194 45.455 0.00 0.00 0.00 2.01
2496 2581 3.072330 TGAGGCATGTGTTTTACCTCTGA 59.928 43.478 12.63 0.00 45.86 3.27
2497 2582 3.679389 AGGCATGTGTTTTACCTCTGAG 58.321 45.455 0.00 0.00 0.00 3.35
2526 2613 8.461222 TCAATGGCTGATCTGTTTTGTTTATAG 58.539 33.333 1.27 0.00 0.00 1.31
2527 2614 7.944729 ATGGCTGATCTGTTTTGTTTATAGT 57.055 32.000 1.27 0.00 0.00 2.12
2534 2621 9.772973 TGATCTGTTTTGTTTATAGTACACACT 57.227 29.630 0.00 0.00 38.91 3.55
2544 2674 7.654520 TGTTTATAGTACACACTCTGTTCAACC 59.345 37.037 0.00 0.00 36.14 3.77
2558 2688 0.759959 TCAACCGTGGAAGCTTACCA 59.240 50.000 6.13 9.74 34.84 3.25
2609 2745 8.099537 CCTCTGGTCAGATATTTTGCTGTATAT 58.900 37.037 0.75 0.00 36.76 0.86
2711 2879 9.298250 TCCTATGCTATACGATATTAATCTCCC 57.702 37.037 0.00 0.00 0.00 4.30
2722 2893 2.288961 TAATCTCCCAAGCGTTCGTC 57.711 50.000 0.00 0.00 0.00 4.20
2732 2903 1.134226 AGCGTTCGTCCTTAACAACG 58.866 50.000 0.00 0.00 41.31 4.10
2733 2904 0.854705 GCGTTCGTCCTTAACAACGT 59.145 50.000 5.11 0.00 40.89 3.99
2784 2955 1.886886 AAGCGTACACGTCCCAAAAT 58.113 45.000 3.44 0.00 42.22 1.82
2788 2959 1.662122 CGTACACGTCCCAAAATAGGC 59.338 52.381 0.00 0.00 34.11 3.93
2810 2986 1.680522 GAGAGCAGAGAATCCGGCCA 61.681 60.000 2.24 0.00 36.68 5.36
2811 2987 1.227497 GAGCAGAGAATCCGGCCAG 60.227 63.158 2.24 0.00 36.68 4.85
2827 3003 2.083002 GCCAGGCAGAAAAGAGAAGAG 58.917 52.381 6.55 0.00 0.00 2.85
2832 3008 5.303971 CAGGCAGAAAAGAGAAGAGAAGAA 58.696 41.667 0.00 0.00 0.00 2.52
2833 3009 5.762218 CAGGCAGAAAAGAGAAGAGAAGAAA 59.238 40.000 0.00 0.00 0.00 2.52
2834 3010 6.261826 CAGGCAGAAAAGAGAAGAGAAGAAAA 59.738 38.462 0.00 0.00 0.00 2.29
2835 3011 6.486320 AGGCAGAAAAGAGAAGAGAAGAAAAG 59.514 38.462 0.00 0.00 0.00 2.27
2836 3012 6.484977 GGCAGAAAAGAGAAGAGAAGAAAAGA 59.515 38.462 0.00 0.00 0.00 2.52
2837 3013 7.174772 GGCAGAAAAGAGAAGAGAAGAAAAGAT 59.825 37.037 0.00 0.00 0.00 2.40
2838 3014 8.016801 GCAGAAAAGAGAAGAGAAGAAAAGATG 58.983 37.037 0.00 0.00 0.00 2.90
2839 3015 9.270640 CAGAAAAGAGAAGAGAAGAAAAGATGA 57.729 33.333 0.00 0.00 0.00 2.92
2840 3016 9.492973 AGAAAAGAGAAGAGAAGAAAAGATGAG 57.507 33.333 0.00 0.00 0.00 2.90
2841 3017 9.487790 GAAAAGAGAAGAGAAGAAAAGATGAGA 57.512 33.333 0.00 0.00 0.00 3.27
2870 3046 0.609406 GGCCAAGGAAAGTCCACTCC 60.609 60.000 0.00 0.00 39.61 3.85
2929 3148 2.436646 GTCGCCCATCACACCTGG 60.437 66.667 0.00 0.00 0.00 4.45
2948 3167 4.263506 CCTGGTCTCCAATTACTTTCACCT 60.264 45.833 0.00 0.00 30.80 4.00
2966 3185 9.703892 CTTTCACCTCATCTTATTATACTCCAG 57.296 37.037 0.00 0.00 0.00 3.86
2997 3219 7.560368 ACTGGTAAGTACGAGTGTATAGTAGT 58.440 38.462 5.45 0.00 42.46 2.73
2998 3220 8.696374 ACTGGTAAGTACGAGTGTATAGTAGTA 58.304 37.037 5.45 0.00 42.46 1.82
3082 3304 1.440938 CGATTAATTTGCGGCCGGGA 61.441 55.000 29.38 5.90 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.764637 AATTCCGTGCCCTCCACACC 62.765 60.000 0.00 0.00 44.91 4.16
3 4 1.303317 AATTCCGTGCCCTCCACAC 60.303 57.895 0.00 0.00 44.91 3.82
4 5 1.303236 CAATTCCGTGCCCTCCACA 60.303 57.895 0.00 0.00 44.91 4.17
5 6 0.035820 TACAATTCCGTGCCCTCCAC 60.036 55.000 0.00 0.00 41.15 4.02
6 7 0.693622 TTACAATTCCGTGCCCTCCA 59.306 50.000 0.00 0.00 0.00 3.86
7 8 2.052782 ATTACAATTCCGTGCCCTCC 57.947 50.000 0.00 0.00 0.00 4.30
8 9 3.139077 CCTATTACAATTCCGTGCCCTC 58.861 50.000 0.00 0.00 0.00 4.30
11 12 3.942748 TCAACCTATTACAATTCCGTGCC 59.057 43.478 0.00 0.00 0.00 5.01
13 14 6.106673 AGAGTCAACCTATTACAATTCCGTG 58.893 40.000 0.00 0.00 0.00 4.94
14 15 6.154706 AGAGAGTCAACCTATTACAATTCCGT 59.845 38.462 0.00 0.00 0.00 4.69
15 16 6.574350 AGAGAGTCAACCTATTACAATTCCG 58.426 40.000 0.00 0.00 0.00 4.30
16 17 8.794335 AAAGAGAGTCAACCTATTACAATTCC 57.206 34.615 0.00 0.00 0.00 3.01
17 18 9.660180 AGAAAGAGAGTCAACCTATTACAATTC 57.340 33.333 0.00 0.00 0.00 2.17
18 19 9.660180 GAGAAAGAGAGTCAACCTATTACAATT 57.340 33.333 0.00 0.00 0.00 2.32
20 21 7.176165 TCGAGAAAGAGAGTCAACCTATTACAA 59.824 37.037 0.00 0.00 0.00 2.41
21 22 6.657966 TCGAGAAAGAGAGTCAACCTATTACA 59.342 38.462 0.00 0.00 0.00 2.41
22 23 7.086230 TCGAGAAAGAGAGTCAACCTATTAC 57.914 40.000 0.00 0.00 0.00 1.89
23 24 7.698506 TTCGAGAAAGAGAGTCAACCTATTA 57.301 36.000 0.00 0.00 0.00 0.98
27 28 4.081917 GGATTCGAGAAAGAGAGTCAACCT 60.082 45.833 0.00 0.00 0.00 3.50
28 29 4.177783 GGATTCGAGAAAGAGAGTCAACC 58.822 47.826 0.00 0.00 0.00 3.77
29 30 4.177783 GGGATTCGAGAAAGAGAGTCAAC 58.822 47.826 0.00 0.00 0.00 3.18
30 31 3.195825 GGGGATTCGAGAAAGAGAGTCAA 59.804 47.826 0.00 0.00 0.00 3.18
31 32 2.761208 GGGGATTCGAGAAAGAGAGTCA 59.239 50.000 0.00 0.00 0.00 3.41
32 33 2.101750 GGGGGATTCGAGAAAGAGAGTC 59.898 54.545 0.00 0.00 0.00 3.36
33 34 2.112190 GGGGGATTCGAGAAAGAGAGT 58.888 52.381 0.00 0.00 0.00 3.24
34 35 2.364002 GAGGGGGATTCGAGAAAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
35 36 2.389715 GAGGGGGATTCGAGAAAGAGA 58.610 52.381 0.00 0.00 0.00 3.10
36 37 1.414550 GGAGGGGGATTCGAGAAAGAG 59.585 57.143 0.00 0.00 0.00 2.85
37 38 1.497161 GGAGGGGGATTCGAGAAAGA 58.503 55.000 0.00 0.00 0.00 2.52
38 39 0.470341 GGGAGGGGGATTCGAGAAAG 59.530 60.000 0.00 0.00 0.00 2.62
39 40 0.986550 GGGGAGGGGGATTCGAGAAA 60.987 60.000 0.00 0.00 0.00 2.52
40 41 1.384082 GGGGAGGGGGATTCGAGAA 60.384 63.158 0.00 0.00 0.00 2.87
41 42 2.285868 GGGGAGGGGGATTCGAGA 59.714 66.667 0.00 0.00 0.00 4.04
42 43 2.849646 GGGGGAGGGGGATTCGAG 60.850 72.222 0.00 0.00 0.00 4.04
43 44 3.373846 AGGGGGAGGGGGATTCGA 61.374 66.667 0.00 0.00 0.00 3.71
44 45 3.171388 CAGGGGGAGGGGGATTCG 61.171 72.222 0.00 0.00 0.00 3.34
45 46 3.502875 GCAGGGGGAGGGGGATTC 61.503 72.222 0.00 0.00 0.00 2.52
50 51 4.109656 AGTAGGCAGGGGGAGGGG 62.110 72.222 0.00 0.00 0.00 4.79
51 52 2.252012 TACAGTAGGCAGGGGGAGGG 62.252 65.000 0.00 0.00 0.00 4.30
52 53 0.104934 ATACAGTAGGCAGGGGGAGG 60.105 60.000 0.00 0.00 0.00 4.30
53 54 1.343069 GATACAGTAGGCAGGGGGAG 58.657 60.000 0.00 0.00 0.00 4.30
54 55 0.105142 GGATACAGTAGGCAGGGGGA 60.105 60.000 0.00 0.00 0.00 4.81
55 56 0.104934 AGGATACAGTAGGCAGGGGG 60.105 60.000 0.00 0.00 41.41 5.40
56 57 1.807814 AAGGATACAGTAGGCAGGGG 58.192 55.000 0.00 0.00 41.41 4.79
57 58 3.456277 AGAAAAGGATACAGTAGGCAGGG 59.544 47.826 0.00 0.00 41.41 4.45
58 59 4.443598 GGAGAAAAGGATACAGTAGGCAGG 60.444 50.000 0.00 0.00 41.41 4.85
59 60 4.407296 AGGAGAAAAGGATACAGTAGGCAG 59.593 45.833 0.00 0.00 41.41 4.85
60 61 4.362677 AGGAGAAAAGGATACAGTAGGCA 58.637 43.478 0.00 0.00 41.41 4.75
61 62 4.202274 GGAGGAGAAAAGGATACAGTAGGC 60.202 50.000 0.00 0.00 41.41 3.93
62 63 4.345547 GGGAGGAGAAAAGGATACAGTAGG 59.654 50.000 0.00 0.00 41.41 3.18
63 64 4.038162 CGGGAGGAGAAAAGGATACAGTAG 59.962 50.000 0.00 0.00 41.41 2.57
64 65 3.958798 CGGGAGGAGAAAAGGATACAGTA 59.041 47.826 0.00 0.00 41.41 2.74
65 66 2.766828 CGGGAGGAGAAAAGGATACAGT 59.233 50.000 0.00 0.00 41.41 3.55
66 67 3.031736 TCGGGAGGAGAAAAGGATACAG 58.968 50.000 0.00 0.00 41.41 2.74
67 68 3.110293 TCGGGAGGAGAAAAGGATACA 57.890 47.619 0.00 0.00 41.41 2.29
68 69 3.007074 GGATCGGGAGGAGAAAAGGATAC 59.993 52.174 0.00 0.00 0.00 2.24
69 70 3.240302 GGATCGGGAGGAGAAAAGGATA 58.760 50.000 0.00 0.00 0.00 2.59
70 71 2.050918 GGATCGGGAGGAGAAAAGGAT 58.949 52.381 0.00 0.00 0.00 3.24
71 72 1.497161 GGATCGGGAGGAGAAAAGGA 58.503 55.000 0.00 0.00 0.00 3.36
72 73 0.470341 GGGATCGGGAGGAGAAAAGG 59.530 60.000 0.00 0.00 0.00 3.11
73 74 0.470341 GGGGATCGGGAGGAGAAAAG 59.530 60.000 0.00 0.00 0.00 2.27
74 75 0.044244 AGGGGATCGGGAGGAGAAAA 59.956 55.000 0.00 0.00 0.00 2.29
75 76 0.044244 AAGGGGATCGGGAGGAGAAA 59.956 55.000 0.00 0.00 0.00 2.52
76 77 0.044244 AAAGGGGATCGGGAGGAGAA 59.956 55.000 0.00 0.00 0.00 2.87
77 78 0.398664 GAAAGGGGATCGGGAGGAGA 60.399 60.000 0.00 0.00 0.00 3.71
78 79 0.399233 AGAAAGGGGATCGGGAGGAG 60.399 60.000 0.00 0.00 0.00 3.69
79 80 0.938945 TAGAAAGGGGATCGGGAGGA 59.061 55.000 0.00 0.00 0.00 3.71
80 81 1.049402 GTAGAAAGGGGATCGGGAGG 58.951 60.000 0.00 0.00 0.00 4.30
81 82 1.964933 GAGTAGAAAGGGGATCGGGAG 59.035 57.143 0.00 0.00 0.00 4.30
82 83 1.574339 AGAGTAGAAAGGGGATCGGGA 59.426 52.381 0.00 0.00 0.00 5.14
83 84 1.689273 CAGAGTAGAAAGGGGATCGGG 59.311 57.143 0.00 0.00 0.00 5.14
84 85 1.689273 CCAGAGTAGAAAGGGGATCGG 59.311 57.143 0.00 0.00 0.00 4.18
85 86 2.667470 TCCAGAGTAGAAAGGGGATCG 58.333 52.381 0.00 0.00 0.00 3.69
86 87 3.134985 GGTTCCAGAGTAGAAAGGGGATC 59.865 52.174 0.00 0.00 0.00 3.36
87 88 3.116174 GGTTCCAGAGTAGAAAGGGGAT 58.884 50.000 0.00 0.00 0.00 3.85
88 89 2.547990 GGTTCCAGAGTAGAAAGGGGA 58.452 52.381 0.00 0.00 0.00 4.81
89 90 1.560146 GGGTTCCAGAGTAGAAAGGGG 59.440 57.143 0.00 0.00 0.00 4.79
90 91 2.552367 AGGGTTCCAGAGTAGAAAGGG 58.448 52.381 0.00 0.00 0.00 3.95
91 92 3.133183 GCTAGGGTTCCAGAGTAGAAAGG 59.867 52.174 0.00 0.00 0.00 3.11
92 93 4.027437 AGCTAGGGTTCCAGAGTAGAAAG 58.973 47.826 0.00 0.00 0.00 2.62
93 94 4.062490 AGCTAGGGTTCCAGAGTAGAAA 57.938 45.455 0.00 0.00 0.00 2.52
94 95 3.759815 AGCTAGGGTTCCAGAGTAGAA 57.240 47.619 0.00 0.00 0.00 2.10
95 96 3.117587 GGTAGCTAGGGTTCCAGAGTAGA 60.118 52.174 0.00 0.00 0.00 2.59
96 97 3.224269 GGTAGCTAGGGTTCCAGAGTAG 58.776 54.545 0.00 0.00 0.00 2.57
97 98 2.584031 TGGTAGCTAGGGTTCCAGAGTA 59.416 50.000 0.00 0.00 0.00 2.59
98 99 1.361543 TGGTAGCTAGGGTTCCAGAGT 59.638 52.381 0.00 0.00 0.00 3.24
99 100 2.160721 TGGTAGCTAGGGTTCCAGAG 57.839 55.000 0.00 0.00 0.00 3.35
100 101 2.634639 TTGGTAGCTAGGGTTCCAGA 57.365 50.000 0.00 0.00 0.00 3.86
101 102 3.933861 AATTGGTAGCTAGGGTTCCAG 57.066 47.619 0.00 0.00 0.00 3.86
102 103 3.053917 GGAAATTGGTAGCTAGGGTTCCA 60.054 47.826 13.09 6.39 34.66 3.53
103 104 3.552875 GGAAATTGGTAGCTAGGGTTCC 58.447 50.000 0.00 0.00 0.00 3.62
104 105 3.552875 GGGAAATTGGTAGCTAGGGTTC 58.447 50.000 0.00 0.00 0.00 3.62
105 106 2.243994 GGGGAAATTGGTAGCTAGGGTT 59.756 50.000 0.00 0.00 0.00 4.11
106 107 1.850998 GGGGAAATTGGTAGCTAGGGT 59.149 52.381 0.00 0.00 0.00 4.34
107 108 2.136026 AGGGGAAATTGGTAGCTAGGG 58.864 52.381 0.00 0.00 0.00 3.53
108 109 2.509964 ACAGGGGAAATTGGTAGCTAGG 59.490 50.000 0.00 0.00 0.00 3.02
109 110 3.933861 ACAGGGGAAATTGGTAGCTAG 57.066 47.619 0.00 0.00 0.00 3.42
110 111 4.039973 CGATACAGGGGAAATTGGTAGCTA 59.960 45.833 0.00 0.00 0.00 3.32
111 112 3.181454 CGATACAGGGGAAATTGGTAGCT 60.181 47.826 0.00 0.00 0.00 3.32
112 113 3.139077 CGATACAGGGGAAATTGGTAGC 58.861 50.000 0.00 0.00 0.00 3.58
113 114 3.139077 GCGATACAGGGGAAATTGGTAG 58.861 50.000 0.00 0.00 0.00 3.18
114 115 2.158726 GGCGATACAGGGGAAATTGGTA 60.159 50.000 0.00 0.00 0.00 3.25
115 116 1.409661 GGCGATACAGGGGAAATTGGT 60.410 52.381 0.00 0.00 0.00 3.67
116 117 1.318576 GGCGATACAGGGGAAATTGG 58.681 55.000 0.00 0.00 0.00 3.16
117 118 2.051334 TGGCGATACAGGGGAAATTG 57.949 50.000 0.00 0.00 0.00 2.32
118 119 4.447138 TTATGGCGATACAGGGGAAATT 57.553 40.909 0.00 0.00 0.00 1.82
119 120 4.657814 ATTATGGCGATACAGGGGAAAT 57.342 40.909 0.00 0.00 0.00 2.17
120 121 4.141287 CAATTATGGCGATACAGGGGAAA 58.859 43.478 0.00 0.00 0.00 3.13
121 122 3.392947 TCAATTATGGCGATACAGGGGAA 59.607 43.478 0.00 0.00 0.00 3.97
122 123 2.976185 TCAATTATGGCGATACAGGGGA 59.024 45.455 0.00 0.00 0.00 4.81
123 124 3.244561 ACTCAATTATGGCGATACAGGGG 60.245 47.826 0.00 0.00 0.00 4.79
124 125 4.008074 ACTCAATTATGGCGATACAGGG 57.992 45.455 0.00 0.00 0.00 4.45
125 126 6.025749 TCTACTCAATTATGGCGATACAGG 57.974 41.667 0.00 0.00 0.00 4.00
126 127 6.470556 CGATCTACTCAATTATGGCGATACAG 59.529 42.308 0.00 0.00 0.00 2.74
127 128 6.150474 TCGATCTACTCAATTATGGCGATACA 59.850 38.462 0.00 0.00 0.00 2.29
128 129 6.552629 TCGATCTACTCAATTATGGCGATAC 58.447 40.000 0.00 0.00 0.00 2.24
129 130 6.678164 GCTCGATCTACTCAATTATGGCGATA 60.678 42.308 0.00 0.00 0.00 2.92
130 131 5.644977 TCGATCTACTCAATTATGGCGAT 57.355 39.130 0.00 0.00 0.00 4.58
131 132 4.616143 GCTCGATCTACTCAATTATGGCGA 60.616 45.833 0.00 0.00 0.00 5.54
132 133 3.610242 GCTCGATCTACTCAATTATGGCG 59.390 47.826 0.00 0.00 0.00 5.69
133 134 4.560128 TGCTCGATCTACTCAATTATGGC 58.440 43.478 0.00 0.00 0.00 4.40
134 135 6.450545 TCTTGCTCGATCTACTCAATTATGG 58.549 40.000 0.00 0.00 0.00 2.74
135 136 6.585702 CCTCTTGCTCGATCTACTCAATTATG 59.414 42.308 0.00 0.00 0.00 1.90
136 137 6.295011 CCCTCTTGCTCGATCTACTCAATTAT 60.295 42.308 0.00 0.00 0.00 1.28
137 138 5.010112 CCCTCTTGCTCGATCTACTCAATTA 59.990 44.000 0.00 0.00 0.00 1.40
138 139 4.202202 CCCTCTTGCTCGATCTACTCAATT 60.202 45.833 0.00 0.00 0.00 2.32
139 140 3.320541 CCCTCTTGCTCGATCTACTCAAT 59.679 47.826 0.00 0.00 0.00 2.57
140 141 2.690497 CCCTCTTGCTCGATCTACTCAA 59.310 50.000 0.00 0.00 0.00 3.02
141 142 2.092375 TCCCTCTTGCTCGATCTACTCA 60.092 50.000 0.00 0.00 0.00 3.41
142 143 2.292292 GTCCCTCTTGCTCGATCTACTC 59.708 54.545 0.00 0.00 0.00 2.59
143 144 2.303175 GTCCCTCTTGCTCGATCTACT 58.697 52.381 0.00 0.00 0.00 2.57
144 145 1.338655 GGTCCCTCTTGCTCGATCTAC 59.661 57.143 0.00 0.00 0.00 2.59
145 146 1.215673 AGGTCCCTCTTGCTCGATCTA 59.784 52.381 0.00 0.00 0.00 1.98
146 147 0.032615 AGGTCCCTCTTGCTCGATCT 60.033 55.000 0.00 0.00 0.00 2.75
147 148 1.693627 TAGGTCCCTCTTGCTCGATC 58.306 55.000 0.00 0.00 0.00 3.69
148 149 1.757699 GTTAGGTCCCTCTTGCTCGAT 59.242 52.381 0.00 0.00 0.00 3.59
149 150 1.183549 GTTAGGTCCCTCTTGCTCGA 58.816 55.000 0.00 0.00 0.00 4.04
150 151 0.895530 TGTTAGGTCCCTCTTGCTCG 59.104 55.000 0.00 0.00 0.00 5.03
151 152 3.198853 AGATTGTTAGGTCCCTCTTGCTC 59.801 47.826 0.00 0.00 0.00 4.26
152 153 3.185455 AGATTGTTAGGTCCCTCTTGCT 58.815 45.455 0.00 0.00 0.00 3.91
153 154 3.636153 AGATTGTTAGGTCCCTCTTGC 57.364 47.619 0.00 0.00 0.00 4.01
154 155 5.665459 CAGTAGATTGTTAGGTCCCTCTTG 58.335 45.833 0.00 0.00 0.00 3.02
155 156 4.162509 GCAGTAGATTGTTAGGTCCCTCTT 59.837 45.833 0.00 0.00 0.00 2.85
156 157 3.707102 GCAGTAGATTGTTAGGTCCCTCT 59.293 47.826 0.00 0.00 0.00 3.69
157 158 3.451178 TGCAGTAGATTGTTAGGTCCCTC 59.549 47.826 0.00 0.00 0.00 4.30
158 159 3.450904 TGCAGTAGATTGTTAGGTCCCT 58.549 45.455 0.00 0.00 0.00 4.20
159 160 3.906720 TGCAGTAGATTGTTAGGTCCC 57.093 47.619 0.00 0.00 0.00 4.46
160 161 6.759497 AAAATGCAGTAGATTGTTAGGTCC 57.241 37.500 0.00 0.00 0.00 4.46
161 162 8.947115 ACTTAAAATGCAGTAGATTGTTAGGTC 58.053 33.333 0.00 0.00 0.00 3.85
162 163 8.863872 ACTTAAAATGCAGTAGATTGTTAGGT 57.136 30.769 0.00 0.00 0.00 3.08
210 211 5.009610 TGCACGAATCTAAAGAAGCCTTTTT 59.990 36.000 0.00 0.00 42.26 1.94
211 212 4.518970 TGCACGAATCTAAAGAAGCCTTTT 59.481 37.500 0.00 0.00 42.26 2.27
212 213 4.072131 TGCACGAATCTAAAGAAGCCTTT 58.928 39.130 0.00 0.00 44.26 3.11
213 214 3.674997 TGCACGAATCTAAAGAAGCCTT 58.325 40.909 0.00 0.00 0.00 4.35
214 215 3.334583 TGCACGAATCTAAAGAAGCCT 57.665 42.857 0.00 0.00 0.00 4.58
215 216 4.419522 TTTGCACGAATCTAAAGAAGCC 57.580 40.909 0.00 0.00 0.00 4.35
216 217 8.365938 GTTTTATTTGCACGAATCTAAAGAAGC 58.634 33.333 0.00 0.00 0.00 3.86
220 221 6.799925 ACCGTTTTATTTGCACGAATCTAAAG 59.200 34.615 0.00 0.00 35.93 1.85
248 249 2.012937 ATCAACGCCGAATCCGTTTA 57.987 45.000 0.00 0.00 45.56 2.01
258 259 3.787634 CAGATCAATCAAAATCAACGCCG 59.212 43.478 0.00 0.00 0.00 6.46
297 298 1.375140 CTGTCGGCATGTCAGTGCT 60.375 57.895 0.00 0.00 44.45 4.40
499 523 5.736951 TTAATTTGTGGGGTGGAATGAAG 57.263 39.130 0.00 0.00 0.00 3.02
536 560 2.455674 TGGAGTGGTGATTGAGTTCG 57.544 50.000 0.00 0.00 0.00 3.95
537 561 8.506168 TTAATTATGGAGTGGTGATTGAGTTC 57.494 34.615 0.00 0.00 0.00 3.01
539 563 7.056635 CCTTAATTATGGAGTGGTGATTGAGT 58.943 38.462 11.17 0.00 0.00 3.41
561 585 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
562 586 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
563 587 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
564 588 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
565 589 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
566 590 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
567 591 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
568 592 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
569 593 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
570 594 7.061688 ACTAGTCTAAGTTACTCCCCACTATG 58.938 42.308 0.00 0.00 0.00 2.23
571 595 7.223472 ACTAGTCTAAGTTACTCCCCACTAT 57.777 40.000 0.00 0.00 0.00 2.12
572 596 6.649041 ACTAGTCTAAGTTACTCCCCACTA 57.351 41.667 0.00 0.00 0.00 2.74
573 597 5.533333 ACTAGTCTAAGTTACTCCCCACT 57.467 43.478 0.00 0.00 0.00 4.00
574 598 6.660949 TGTTACTAGTCTAAGTTACTCCCCAC 59.339 42.308 0.00 0.00 31.82 4.61
575 599 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
576 600 7.894753 ATGTTACTAGTCTAAGTTACTCCCC 57.105 40.000 0.00 0.00 31.82 4.81
577 601 9.401058 TGTATGTTACTAGTCTAAGTTACTCCC 57.599 37.037 0.00 0.00 31.82 4.30
606 630 9.964354 TGAAGGTAGTAACATAGACTAGTAACA 57.036 33.333 0.00 0.00 30.08 2.41
612 636 9.570468 CCACTATGAAGGTAGTAACATAGACTA 57.430 37.037 16.37 0.00 42.41 2.59
613 637 7.506261 CCCACTATGAAGGTAGTAACATAGACT 59.494 40.741 16.37 0.00 42.41 3.24
614 638 7.287235 ACCCACTATGAAGGTAGTAACATAGAC 59.713 40.741 16.37 0.00 42.41 2.59
615 639 7.359849 ACCCACTATGAAGGTAGTAACATAGA 58.640 38.462 16.37 0.00 42.41 1.98
616 640 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
617 641 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
618 642 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
625 649 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
626 650 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
627 651 5.011125 CCTATGACACTACCCACTATGAAGG 59.989 48.000 0.00 0.00 0.00 3.46
628 652 5.598830 ACCTATGACACTACCCACTATGAAG 59.401 44.000 0.00 0.00 0.00 3.02
629 653 5.525484 ACCTATGACACTACCCACTATGAA 58.475 41.667 0.00 0.00 0.00 2.57
630 654 5.138758 ACCTATGACACTACCCACTATGA 57.861 43.478 0.00 0.00 0.00 2.15
631 655 6.071334 CCATACCTATGACACTACCCACTATG 60.071 46.154 0.00 0.00 35.75 2.23
632 656 6.017192 CCATACCTATGACACTACCCACTAT 58.983 44.000 0.00 0.00 35.75 2.12
633 657 5.103387 ACCATACCTATGACACTACCCACTA 60.103 44.000 0.00 0.00 35.75 2.74
634 658 4.223953 CCATACCTATGACACTACCCACT 58.776 47.826 0.00 0.00 35.75 4.00
635 659 3.965347 ACCATACCTATGACACTACCCAC 59.035 47.826 0.00 0.00 35.75 4.61
636 660 4.274794 ACCATACCTATGACACTACCCA 57.725 45.455 0.00 0.00 35.75 4.51
637 661 5.599656 TGTTACCATACCTATGACACTACCC 59.400 44.000 0.00 0.00 35.75 3.69
638 662 6.720112 TGTTACCATACCTATGACACTACC 57.280 41.667 0.00 0.00 35.75 3.18
639 663 9.075678 ACTATGTTACCATACCTATGACACTAC 57.924 37.037 0.00 0.00 35.75 2.73
640 664 9.650714 AACTATGTTACCATACCTATGACACTA 57.349 33.333 0.00 0.00 35.75 2.74
641 665 8.421784 CAACTATGTTACCATACCTATGACACT 58.578 37.037 0.00 0.00 35.75 3.55
642 666 7.170998 GCAACTATGTTACCATACCTATGACAC 59.829 40.741 0.00 0.00 35.75 3.67
643 667 7.214381 GCAACTATGTTACCATACCTATGACA 58.786 38.462 0.00 0.00 35.75 3.58
644 668 6.649557 GGCAACTATGTTACCATACCTATGAC 59.350 42.308 0.00 0.00 35.75 3.06
645 669 6.765403 GGCAACTATGTTACCATACCTATGA 58.235 40.000 0.00 0.00 35.75 2.15
664 688 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
665 689 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
666 690 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
667 691 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
678 702 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
679 703 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
680 704 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
681 705 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
682 706 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
683 707 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
684 708 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
685 709 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
686 710 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
687 711 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
688 712 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
689 713 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
690 714 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
691 715 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
692 716 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
693 717 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
694 718 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
695 719 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
696 720 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
697 721 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
698 722 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
699 723 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
700 724 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
701 725 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
702 726 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
703 727 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
704 728 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
705 729 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
706 730 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
707 731 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
708 732 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
709 733 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
728 752 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
729 753 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
730 754 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
731 755 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
732 756 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
733 757 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
734 758 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
735 759 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
736 760 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
737 761 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
738 762 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
739 763 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
740 764 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
741 765 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
742 766 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
743 767 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
744 768 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
745 769 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
746 770 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
747 771 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
748 772 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
749 773 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
750 774 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
751 775 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
752 776 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
753 777 5.185454 TGATGTGGCAAGTAGTTAATGAGG 58.815 41.667 0.00 0.00 0.00 3.86
754 778 6.539826 TGATGATGTGGCAAGTAGTTAATGAG 59.460 38.462 0.00 0.00 0.00 2.90
755 779 6.413892 TGATGATGTGGCAAGTAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
756 780 6.682423 TGATGATGTGGCAAGTAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
757 781 7.886629 AATGATGATGTGGCAAGTAGTTAAT 57.113 32.000 0.00 0.00 0.00 1.40
758 782 7.701539 AAATGATGATGTGGCAAGTAGTTAA 57.298 32.000 0.00 0.00 0.00 2.01
759 783 7.701539 AAAATGATGATGTGGCAAGTAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
760 784 6.594788 AAAATGATGATGTGGCAAGTAGTT 57.405 33.333 0.00 0.00 0.00 2.24
761 785 6.392354 CAAAAATGATGATGTGGCAAGTAGT 58.608 36.000 0.00 0.00 0.00 2.73
762 786 5.290158 GCAAAAATGATGATGTGGCAAGTAG 59.710 40.000 0.00 0.00 0.00 2.57
763 787 5.047164 AGCAAAAATGATGATGTGGCAAGTA 60.047 36.000 0.00 0.00 0.00 2.24
764 788 3.998341 GCAAAAATGATGATGTGGCAAGT 59.002 39.130 0.00 0.00 0.00 3.16
765 789 4.250464 AGCAAAAATGATGATGTGGCAAG 58.750 39.130 0.00 0.00 0.00 4.01
766 790 4.274602 AGCAAAAATGATGATGTGGCAA 57.725 36.364 0.00 0.00 0.00 4.52
767 791 3.965379 AGCAAAAATGATGATGTGGCA 57.035 38.095 0.00 0.00 0.00 4.92
768 792 5.813672 ACATAAGCAAAAATGATGATGTGGC 59.186 36.000 0.00 0.00 0.00 5.01
769 793 7.229228 CACATAAGCAAAAATGATGATGTGG 57.771 36.000 14.08 0.34 39.34 4.17
770 794 6.237996 GCCACATAAGCAAAAATGATGATGTG 60.238 38.462 14.69 14.69 41.53 3.21
771 795 5.813672 GCCACATAAGCAAAAATGATGATGT 59.186 36.000 0.00 0.00 0.00 3.06
772 796 5.813157 TGCCACATAAGCAAAAATGATGATG 59.187 36.000 0.00 0.00 37.28 3.07
773 797 5.979993 TGCCACATAAGCAAAAATGATGAT 58.020 33.333 0.00 0.00 37.28 2.45
774 798 5.402997 TGCCACATAAGCAAAAATGATGA 57.597 34.783 0.00 0.00 37.28 2.92
775 799 6.046593 AGATGCCACATAAGCAAAAATGATG 58.953 36.000 0.00 0.00 44.83 3.07
776 800 6.229936 AGATGCCACATAAGCAAAAATGAT 57.770 33.333 0.00 0.00 44.83 2.45
777 801 5.664294 AGATGCCACATAAGCAAAAATGA 57.336 34.783 0.00 0.00 44.83 2.57
778 802 6.982141 ACATAGATGCCACATAAGCAAAAATG 59.018 34.615 0.00 0.00 44.83 2.32
779 803 7.116075 ACATAGATGCCACATAAGCAAAAAT 57.884 32.000 0.00 0.00 44.83 1.82
780 804 6.528537 ACATAGATGCCACATAAGCAAAAA 57.471 33.333 0.00 0.00 44.83 1.94
781 805 6.528537 AACATAGATGCCACATAAGCAAAA 57.471 33.333 0.00 0.00 44.83 2.44
782 806 6.828273 AGTAACATAGATGCCACATAAGCAAA 59.172 34.615 0.00 0.00 44.83 3.68
783 807 6.356556 AGTAACATAGATGCCACATAAGCAA 58.643 36.000 0.00 0.00 44.83 3.91
784 808 5.928976 AGTAACATAGATGCCACATAAGCA 58.071 37.500 0.00 0.00 45.94 3.91
785 809 6.369065 GGTAGTAACATAGATGCCACATAAGC 59.631 42.308 0.00 0.00 0.00 3.09
786 810 7.671302 AGGTAGTAACATAGATGCCACATAAG 58.329 38.462 0.00 0.00 0.00 1.73
787 811 7.612065 AGGTAGTAACATAGATGCCACATAA 57.388 36.000 0.00 0.00 0.00 1.90
788 812 8.749354 CATAGGTAGTAACATAGATGCCACATA 58.251 37.037 0.00 0.00 0.00 2.29
789 813 7.235606 ACATAGGTAGTAACATAGATGCCACAT 59.764 37.037 0.00 0.00 0.00 3.21
790 814 6.553476 ACATAGGTAGTAACATAGATGCCACA 59.447 38.462 0.00 0.00 0.00 4.17
791 815 6.994221 ACATAGGTAGTAACATAGATGCCAC 58.006 40.000 0.00 0.00 0.00 5.01
792 816 7.612065 AACATAGGTAGTAACATAGATGCCA 57.388 36.000 0.00 0.00 0.00 4.92
793 817 8.804204 AGTAACATAGGTAGTAACATAGATGCC 58.196 37.037 0.00 0.00 0.00 4.40
794 818 9.843334 GAGTAACATAGGTAGTAACATAGATGC 57.157 37.037 0.00 0.00 0.00 3.91
796 820 9.531158 GGGAGTAACATAGGTAGTAACATAGAT 57.469 37.037 0.00 0.00 0.00 1.98
797 821 8.505246 TGGGAGTAACATAGGTAGTAACATAGA 58.495 37.037 0.00 0.00 0.00 1.98
798 822 8.574737 GTGGGAGTAACATAGGTAGTAACATAG 58.425 40.741 0.00 0.00 0.00 2.23
799 823 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
800 824 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
801 825 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
802 826 8.574737 CATAGTGGGAGTAACATAGGTAGTAAC 58.425 40.741 0.00 0.00 0.00 2.50
803 827 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
804 828 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
805 829 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
806 830 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
807 831 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
808 832 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
809 833 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
810 834 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
811 835 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
812 836 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
813 837 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
814 838 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
815 839 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
816 840 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
817 841 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
818 842 2.088104 TAGGCTGGTCATAGTGGGAG 57.912 55.000 0.00 0.00 0.00 4.30
819 843 2.561209 TTAGGCTGGTCATAGTGGGA 57.439 50.000 0.00 0.00 0.00 4.37
820 844 2.705658 TGATTAGGCTGGTCATAGTGGG 59.294 50.000 0.00 0.00 0.00 4.61
821 845 3.805108 GCTGATTAGGCTGGTCATAGTGG 60.805 52.174 0.00 0.00 0.00 4.00
822 846 3.397482 GCTGATTAGGCTGGTCATAGTG 58.603 50.000 0.00 0.00 0.00 2.74
823 847 2.370189 GGCTGATTAGGCTGGTCATAGT 59.630 50.000 3.55 0.00 45.44 2.12
824 848 3.051081 GGCTGATTAGGCTGGTCATAG 57.949 52.381 3.55 0.00 45.44 2.23
829 853 4.911773 TCAGAGGGCTGATTAGGCTGGT 62.912 54.545 10.98 0.00 45.88 4.00
830 854 2.313719 TCAGAGGGCTGATTAGGCTGG 61.314 57.143 10.98 0.00 45.88 4.85
831 855 1.126488 TCAGAGGGCTGATTAGGCTG 58.874 55.000 10.98 2.00 45.88 4.85
832 856 3.642977 TCAGAGGGCTGATTAGGCT 57.357 52.632 10.98 0.00 45.88 4.58
894 924 0.324738 ATTGTGAGGGAGAGAGCGGA 60.325 55.000 0.00 0.00 0.00 5.54
897 927 1.134551 GTGGATTGTGAGGGAGAGAGC 60.135 57.143 0.00 0.00 0.00 4.09
899 929 1.186200 CGTGGATTGTGAGGGAGAGA 58.814 55.000 0.00 0.00 0.00 3.10
900 930 0.176680 CCGTGGATTGTGAGGGAGAG 59.823 60.000 0.00 0.00 0.00 3.20
964 998 2.491675 TCTGTCGTTCCTGCTCTCTA 57.508 50.000 0.00 0.00 0.00 2.43
975 1009 2.632996 TCTCCTTGTTGGATCTGTCGTT 59.367 45.455 0.00 0.00 45.16 3.85
1092 1126 1.239296 CCACTGGAGACGTCGTACCA 61.239 60.000 22.98 22.98 0.00 3.25
1160 1203 4.980592 TCCAGGACTGCTGCCCCA 62.981 66.667 0.00 0.00 0.00 4.96
1162 1205 1.751927 CATTCCAGGACTGCTGCCC 60.752 63.158 0.00 0.00 0.00 5.36
1163 1206 1.751927 CCATTCCAGGACTGCTGCC 60.752 63.158 0.98 0.00 0.00 4.85
1191 1234 1.683441 GGAGGAGGCCGGAAAGAAA 59.317 57.895 5.05 0.00 0.00 2.52
1672 1718 6.752815 TGCATCAACGTACGTAGATCAAATTA 59.247 34.615 23.12 0.00 0.00 1.40
1679 1734 2.164827 TGGTGCATCAACGTACGTAGAT 59.835 45.455 23.12 2.73 0.00 1.98
1687 1742 0.534877 TGCTTCTGGTGCATCAACGT 60.535 50.000 0.00 0.00 35.31 3.99
1696 1751 2.037136 CCGCCTTCTGCTTCTGGTG 61.037 63.158 0.00 0.00 38.05 4.17
1698 1753 3.130160 GCCGCCTTCTGCTTCTGG 61.130 66.667 0.00 0.00 38.05 3.86
2116 2171 4.234574 TGACACGACATGACACACTAATC 58.765 43.478 0.00 0.00 0.00 1.75
2138 2193 5.997129 TCAACACTAACACATGACATGACAT 59.003 36.000 22.19 4.76 0.00 3.06
2170 2227 0.038892 CAAGTTGCACCACTGGATGC 60.039 55.000 0.71 8.69 42.40 3.91
2184 2241 9.661954 TTCTTCCTATAGATACTCCATCAAGTT 57.338 33.333 0.00 0.00 35.96 2.66
2205 2262 5.241662 ACTATGCCTGTTCTTCAGTTCTTC 58.758 41.667 0.00 0.00 42.19 2.87
2206 2263 5.234466 ACTATGCCTGTTCTTCAGTTCTT 57.766 39.130 0.00 0.00 42.19 2.52
2207 2264 4.899352 ACTATGCCTGTTCTTCAGTTCT 57.101 40.909 0.00 0.00 42.19 3.01
2208 2265 6.166982 AGTTACTATGCCTGTTCTTCAGTTC 58.833 40.000 0.00 0.00 42.19 3.01
2209 2266 6.115448 AGTTACTATGCCTGTTCTTCAGTT 57.885 37.500 0.00 0.00 42.19 3.16
2210 2267 5.746990 AGTTACTATGCCTGTTCTTCAGT 57.253 39.130 0.00 0.00 42.19 3.41
2211 2268 6.096987 TCCTAGTTACTATGCCTGTTCTTCAG 59.903 42.308 0.00 0.00 43.27 3.02
2212 2269 5.955959 TCCTAGTTACTATGCCTGTTCTTCA 59.044 40.000 0.00 0.00 0.00 3.02
2242 2299 1.993370 CCTGGTTACTTCTCTTTCGCG 59.007 52.381 0.00 0.00 0.00 5.87
2362 2426 1.481363 TCACTTGTACACGGGACAACA 59.519 47.619 0.00 0.00 33.35 3.33
2370 2434 2.159531 CCCATTGCATCACTTGTACACG 60.160 50.000 0.00 0.00 0.00 4.49
2430 2494 7.811236 CACCTTAATTCGTGTAGAAGTACAAGA 59.189 37.037 0.00 0.00 43.35 3.02
2436 2500 6.285990 ACAACACCTTAATTCGTGTAGAAGT 58.714 36.000 6.37 2.52 42.28 3.01
2437 2501 6.645415 AGACAACACCTTAATTCGTGTAGAAG 59.355 38.462 6.37 0.00 42.28 2.85
2439 2503 6.092955 AGACAACACCTTAATTCGTGTAGA 57.907 37.500 6.37 0.00 42.28 2.59
2441 2505 6.050432 ACAAGACAACACCTTAATTCGTGTA 58.950 36.000 6.37 0.00 42.28 2.90
2442 2506 4.879545 ACAAGACAACACCTTAATTCGTGT 59.120 37.500 1.18 1.18 44.95 4.49
2443 2507 5.418310 ACAAGACAACACCTTAATTCGTG 57.582 39.130 0.00 0.00 36.04 4.35
2445 2509 5.816919 ACAACAAGACAACACCTTAATTCG 58.183 37.500 0.00 0.00 0.00 3.34
2446 2510 6.849305 CGTACAACAAGACAACACCTTAATTC 59.151 38.462 0.00 0.00 0.00 2.17
2490 2575 1.134189 TCAGCCATTGATGCTCAGAGG 60.134 52.381 0.00 0.00 36.81 3.69
2496 2581 2.730934 ACAGATCAGCCATTGATGCT 57.269 45.000 0.00 0.00 46.51 3.79
2497 2582 3.795623 AAACAGATCAGCCATTGATGC 57.204 42.857 0.00 0.00 46.51 3.91
2526 2613 2.538449 CACGGTTGAACAGAGTGTGTAC 59.462 50.000 1.76 0.00 39.03 2.90
2527 2614 2.482316 CCACGGTTGAACAGAGTGTGTA 60.482 50.000 1.76 0.00 39.03 2.90
2534 2621 0.468226 AGCTTCCACGGTTGAACAGA 59.532 50.000 1.76 0.00 0.00 3.41
2558 2688 0.617820 ACTCTCTGCATTACGGGGGT 60.618 55.000 0.00 0.00 0.00 4.95
2609 2745 8.567285 TCATTCTCACGCATCTATCTATCTTA 57.433 34.615 0.00 0.00 0.00 2.10
2610 2746 7.392953 TCTCATTCTCACGCATCTATCTATCTT 59.607 37.037 0.00 0.00 0.00 2.40
2612 2748 6.966632 GTCTCATTCTCACGCATCTATCTATC 59.033 42.308 0.00 0.00 0.00 2.08
2689 2837 7.928706 GCTTGGGAGATTAATATCGTATAGCAT 59.071 37.037 14.69 0.00 35.85 3.79
2709 2877 0.794473 GTTAAGGACGAACGCTTGGG 59.206 55.000 0.00 0.00 0.00 4.12
2711 2879 2.658224 CGTTGTTAAGGACGAACGCTTG 60.658 50.000 4.93 0.00 41.53 4.01
2722 2893 2.351350 GCATGTTCCCACGTTGTTAAGG 60.351 50.000 0.00 0.00 0.00 2.69
2732 2903 4.814234 TCTTACGAATATGCATGTTCCCAC 59.186 41.667 25.04 6.57 0.00 4.61
2733 2904 5.029807 TCTTACGAATATGCATGTTCCCA 57.970 39.130 25.04 13.46 0.00 4.37
2742 2913 7.429630 GCTTTCTTTTCCTTCTTACGAATATGC 59.570 37.037 0.00 0.00 0.00 3.14
2758 2929 2.096565 GGGACGTGTACGCTTTCTTTTC 60.097 50.000 4.67 0.00 44.43 2.29
2784 2955 2.315176 GATTCTCTGCTCTCTGGCCTA 58.685 52.381 3.32 0.00 0.00 3.93
2788 2959 0.388659 CCGGATTCTCTGCTCTCTGG 59.611 60.000 0.00 0.00 0.00 3.86
2810 2986 5.559148 TTCTTCTCTTCTCTTTTCTGCCT 57.441 39.130 0.00 0.00 0.00 4.75
2811 2987 6.484977 TCTTTTCTTCTCTTCTCTTTTCTGCC 59.515 38.462 0.00 0.00 0.00 4.85
2827 3003 3.124297 CGCACCACTCTCATCTTTTCTTC 59.876 47.826 0.00 0.00 0.00 2.87
2832 3008 1.066573 CCTCGCACCACTCTCATCTTT 60.067 52.381 0.00 0.00 0.00 2.52
2833 3009 0.534412 CCTCGCACCACTCTCATCTT 59.466 55.000 0.00 0.00 0.00 2.40
2834 3010 1.954362 GCCTCGCACCACTCTCATCT 61.954 60.000 0.00 0.00 0.00 2.90
2835 3011 1.520342 GCCTCGCACCACTCTCATC 60.520 63.158 0.00 0.00 0.00 2.92
2836 3012 2.581354 GCCTCGCACCACTCTCAT 59.419 61.111 0.00 0.00 0.00 2.90
2837 3013 3.695606 GGCCTCGCACCACTCTCA 61.696 66.667 0.00 0.00 0.00 3.27
2838 3014 3.240134 TTGGCCTCGCACCACTCTC 62.240 63.158 3.32 0.00 36.76 3.20
2839 3015 3.241530 TTGGCCTCGCACCACTCT 61.242 61.111 3.32 0.00 36.76 3.24
2840 3016 2.743928 CTTGGCCTCGCACCACTC 60.744 66.667 3.32 0.00 36.76 3.51
2841 3017 4.335647 CCTTGGCCTCGCACCACT 62.336 66.667 3.32 0.00 36.76 4.00
2870 3046 1.081242 GTGTGACTGGCGCATTTGG 60.081 57.895 10.83 0.00 39.56 3.28
2929 3148 6.410540 AGATGAGGTGAAAGTAATTGGAGAC 58.589 40.000 0.00 0.00 0.00 3.36
2972 3191 7.560368 ACTACTATACACTCGTACTTACCAGT 58.440 38.462 0.00 0.00 36.99 4.00
2998 3220 9.431887 ACACGTACTTCACTTGTTAATGAATAT 57.568 29.630 0.00 0.00 36.27 1.28
3002 3224 7.428020 AGTACACGTACTTCACTTGTTAATGA 58.572 34.615 3.99 0.00 43.35 2.57
3011 3233 7.736447 ACTAAGTTAGTACACGTACTTCACT 57.264 36.000 14.00 13.51 43.35 3.41
3053 3275 0.025770 AAATTAATCGTGCGTCGCCG 59.974 50.000 15.88 17.25 39.67 6.46
3063 3285 1.008995 CCCGGCCGCAAATTAATCG 60.009 57.895 22.85 0.90 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.