Multiple sequence alignment - TraesCS1B01G231200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G231200 chr1B 100.000 5407 0 0 983 6389 415114318 415119724 0.000000e+00 9985.0
1 TraesCS1B01G231200 chr1B 100.000 636 0 0 1 636 415113336 415113971 0.000000e+00 1175.0
2 TraesCS1B01G231200 chr1B 100.000 37 0 0 1305 1341 415114613 415114649 1.150000e-07 69.4
3 TraesCS1B01G231200 chr1B 100.000 37 0 0 1278 1314 415114640 415114676 1.150000e-07 69.4
4 TraesCS1B01G231200 chr1D 97.798 1953 39 4 2009 3958 307233459 307235410 0.000000e+00 3365.0
5 TraesCS1B01G231200 chr1D 95.939 985 37 1 4862 5846 307236194 307237175 0.000000e+00 1594.0
6 TraesCS1B01G231200 chr1D 94.214 674 27 6 3953 4624 307235532 307236195 0.000000e+00 1018.0
7 TraesCS1B01G231200 chr1D 84.103 736 39 25 1305 2010 307232610 307233297 1.940000e-179 640.0
8 TraesCS1B01G231200 chr1D 86.742 528 37 6 1004 1529 307232336 307232832 2.010000e-154 556.0
9 TraesCS1B01G231200 chr1D 88.710 248 28 0 4623 4870 378551668 378551915 2.890000e-78 303.0
10 TraesCS1B01G231200 chr1D 88.889 180 11 2 6066 6245 307237162 307237332 5.020000e-51 213.0
11 TraesCS1B01G231200 chr1A 96.065 1423 45 6 3206 4624 385666964 385668379 0.000000e+00 2307.0
12 TraesCS1B01G231200 chr1A 89.227 1578 104 15 1635 3209 385665423 385666937 0.000000e+00 1912.0
13 TraesCS1B01G231200 chr1A 93.630 989 53 5 4862 5846 385668378 385669360 0.000000e+00 1469.0
14 TraesCS1B01G231200 chr1A 93.202 559 29 3 3 560 525182730 525182180 0.000000e+00 813.0
15 TraesCS1B01G231200 chr1A 88.322 608 33 13 983 1584 385664838 385665413 0.000000e+00 695.0
16 TraesCS1B01G231200 chr1A 92.793 333 24 0 228 560 533764597 533764929 3.460000e-132 483.0
17 TraesCS1B01G231200 chr1A 94.313 211 12 0 6070 6280 385669350 385669560 2.220000e-84 324.0
18 TraesCS1B01G231200 chr1A 91.703 229 9 3 4 230 533762964 533763184 6.220000e-80 309.0
19 TraesCS1B01G231200 chr1A 91.925 161 12 1 5648 5807 385669576 385669736 2.320000e-54 224.0
20 TraesCS1B01G231200 chr1A 84.184 196 15 6 6199 6389 385670230 385670414 6.580000e-40 176.0
21 TraesCS1B01G231200 chr1A 81.739 115 20 1 14 127 264086844 264086958 1.900000e-15 95.3
22 TraesCS1B01G231200 chr3D 97.610 544 13 0 3 546 30602063 30602606 0.000000e+00 933.0
23 TraesCS1B01G231200 chr3D 90.196 255 24 1 4620 4874 236629045 236628792 1.330000e-86 331.0
24 TraesCS1B01G231200 chr4A 91.829 563 33 5 3 560 630754205 630754759 0.000000e+00 773.0
25 TraesCS1B01G231200 chr4A 84.615 117 14 3 14 127 76903190 76903305 5.240000e-21 113.0
26 TraesCS1B01G231200 chr5D 93.418 471 23 3 89 559 432667593 432667131 0.000000e+00 691.0
27 TraesCS1B01G231200 chr5D 96.296 81 2 1 3 82 432687968 432687888 1.450000e-26 132.0
28 TraesCS1B01G231200 chr3B 90.625 256 21 3 4620 4874 353997428 353997175 2.850000e-88 337.0
29 TraesCS1B01G231200 chr2D 90.083 242 24 0 4623 4864 78385629 78385388 1.340000e-81 315.0
30 TraesCS1B01G231200 chr2D 88.980 245 27 0 4622 4866 341693855 341694099 2.890000e-78 303.0
31 TraesCS1B01G231200 chr2D 93.970 199 12 0 5845 6043 645558333 645558531 1.040000e-77 302.0
32 TraesCS1B01G231200 chr2D 77.538 325 45 16 1355 1656 244231997 244232316 3.060000e-38 171.0
33 TraesCS1B01G231200 chr6D 89.796 245 24 1 4619 4863 13155320 13155563 4.810000e-81 313.0
34 TraesCS1B01G231200 chr7A 89.669 242 25 0 4622 4863 459619365 459619124 6.220000e-80 309.0
35 TraesCS1B01G231200 chr7A 84.615 117 14 3 14 127 136766215 136766100 5.240000e-21 113.0
36 TraesCS1B01G231200 chr4D 89.344 244 26 0 4622 4865 349216948 349216705 2.240000e-79 307.0
37 TraesCS1B01G231200 chr4D 88.980 245 27 0 4623 4867 323567272 323567516 2.890000e-78 303.0
38 TraesCS1B01G231200 chr4D 87.215 219 17 8 5853 6069 36473567 36473776 8.280000e-59 239.0
39 TraesCS1B01G231200 chr4D 86.758 219 18 8 5853 6069 36474161 36474370 3.850000e-57 233.0
40 TraesCS1B01G231200 chr7B 89.778 225 17 5 5845 6067 44072100 44071880 3.770000e-72 283.0
41 TraesCS1B01G231200 chr7B 84.615 117 14 3 14 127 78572958 78573073 5.240000e-21 113.0
42 TraesCS1B01G231200 chr7D 86.854 213 22 4 5845 6054 428028936 428028727 3.850000e-57 233.0
43 TraesCS1B01G231200 chr7D 86.697 218 18 8 5853 6068 511163866 511164074 1.390000e-56 231.0
44 TraesCS1B01G231200 chr7D 86.574 216 19 7 5853 6067 511156601 511156807 4.980000e-56 230.0
45 TraesCS1B01G231200 chr7D 86.574 216 19 7 5853 6067 511159018 511159224 4.980000e-56 230.0
46 TraesCS1B01G231200 chr7D 86.574 216 19 7 5853 6067 511161444 511161650 4.980000e-56 230.0
47 TraesCS1B01G231200 chr2B 84.615 117 14 3 14 127 19162353 19162468 5.240000e-21 113.0
48 TraesCS1B01G231200 chr2B 84.615 117 14 3 14 127 571203753 571203638 5.240000e-21 113.0
49 TraesCS1B01G231200 chr6A 84.483 116 15 3 14 127 389566166 389566052 1.880000e-20 111.0
50 TraesCS1B01G231200 chr5B 83.761 117 15 3 14 127 32576137 32576022 2.440000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G231200 chr1B 415113336 415119724 6388 False 5580.000000 9985 100.000000 1 6389 2 chr1B.!!$F1 6388
1 TraesCS1B01G231200 chr1D 307232336 307237332 4996 False 1231.000000 3365 91.280833 1004 6245 6 chr1D.!!$F2 5241
2 TraesCS1B01G231200 chr1A 385664838 385670414 5576 False 1015.285714 2307 91.095143 983 6389 7 chr1A.!!$F2 5406
3 TraesCS1B01G231200 chr1A 525182180 525182730 550 True 813.000000 813 93.202000 3 560 1 chr1A.!!$R1 557
4 TraesCS1B01G231200 chr1A 533762964 533764929 1965 False 396.000000 483 92.248000 4 560 2 chr1A.!!$F3 556
5 TraesCS1B01G231200 chr3D 30602063 30602606 543 False 933.000000 933 97.610000 3 546 1 chr3D.!!$F1 543
6 TraesCS1B01G231200 chr4A 630754205 630754759 554 False 773.000000 773 91.829000 3 560 1 chr4A.!!$F2 557
7 TraesCS1B01G231200 chr4D 36473567 36474370 803 False 236.000000 239 86.986500 5853 6069 2 chr4D.!!$F2 216
8 TraesCS1B01G231200 chr7D 511156601 511164074 7473 False 230.250000 231 86.604750 5853 6068 4 chr7D.!!$F1 215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 2040 0.114364 ATCCCAAACACCAACCCCTC 59.886 55.000 0.00 0.0 0.00 4.30 F
1293 2715 0.100503 GGCCAATTTTGACCGATCCG 59.899 55.000 0.00 0.0 0.00 4.18 F
1705 3179 0.105593 ATAGGTGCATCTGGTCTGCG 59.894 55.000 10.55 0.0 42.62 5.18 F
2444 4085 1.264288 GCCAGAGGTGTTTCTTTCACG 59.736 52.381 0.00 0.0 36.76 4.35 F
3944 5619 1.946768 TCAACCTTTCTGAGTTTGGCG 59.053 47.619 0.00 0.0 0.00 5.69 F
5061 6864 1.084289 GGAACGACAACATGCCTACC 58.916 55.000 0.00 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2417 4058 0.178981 AAACACCTCTGGCTGCATGT 60.179 50.000 0.50 0.00 0.00 3.21 R
3033 4674 1.201414 GTAACCCAGCGTTCCAATTGG 59.799 52.381 19.08 19.08 35.79 3.16 R
3044 4685 3.991999 GGGAAACCGTAACCCAGC 58.008 61.111 0.00 0.00 43.64 4.85 R
4022 5824 3.297736 GTGACCCACACTATAGGCTACT 58.702 50.000 4.43 0.00 45.13 2.57 R
5328 7131 0.248843 CTTCCTCTGGCAGAGTGGAC 59.751 60.000 35.40 0.00 42.85 4.02 R
6072 10296 0.110509 CAGTCTGCACGTCATGTTGC 60.111 55.000 9.02 9.02 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 42 8.348285 AGTTGCTTTATTTATAAAGGCACTGA 57.652 30.769 18.82 5.51 45.78 3.41
348 1766 3.009916 AGCTGGAGAAAACATCCATGAGT 59.990 43.478 0.00 0.00 45.64 3.41
539 1961 7.606456 AGGATTGTAATATTTGTCAAGACGTGT 59.394 33.333 0.00 0.00 0.00 4.49
561 1983 1.493772 GCACGTGCACACTTACTACA 58.506 50.000 34.52 0.00 41.59 2.74
562 1984 1.862201 GCACGTGCACACTTACTACAA 59.138 47.619 34.52 0.00 41.59 2.41
563 1985 2.285756 GCACGTGCACACTTACTACAAA 59.714 45.455 34.52 0.00 41.59 2.83
564 1986 3.843510 GCACGTGCACACTTACTACAAAC 60.844 47.826 34.52 0.00 41.59 2.93
565 1987 3.307512 CACGTGCACACTTACTACAAACA 59.692 43.478 18.64 0.00 0.00 2.83
566 1988 3.933955 ACGTGCACACTTACTACAAACAA 59.066 39.130 18.64 0.00 0.00 2.83
567 1989 4.033587 ACGTGCACACTTACTACAAACAAG 59.966 41.667 18.64 0.00 0.00 3.16
568 1990 4.033587 CGTGCACACTTACTACAAACAAGT 59.966 41.667 18.64 0.00 32.82 3.16
569 1991 5.232626 CGTGCACACTTACTACAAACAAGTA 59.767 40.000 18.64 0.00 31.46 2.24
570 1992 6.237888 CGTGCACACTTACTACAAACAAGTAA 60.238 38.462 18.64 0.00 37.15 2.24
571 1993 7.517734 CGTGCACACTTACTACAAACAAGTAAT 60.518 37.037 18.64 0.00 38.42 1.89
572 1994 8.767085 GTGCACACTTACTACAAACAAGTAATA 58.233 33.333 13.17 0.00 38.42 0.98
573 1995 8.767085 TGCACACTTACTACAAACAAGTAATAC 58.233 33.333 0.00 0.00 38.42 1.89
574 1996 7.948363 GCACACTTACTACAAACAAGTAATACG 59.052 37.037 0.00 0.00 38.42 3.06
575 1997 8.971321 CACACTTACTACAAACAAGTAATACGT 58.029 33.333 0.00 0.00 38.42 3.57
576 1998 9.185192 ACACTTACTACAAACAAGTAATACGTC 57.815 33.333 0.00 0.00 38.42 4.34
577 1999 9.403110 CACTTACTACAAACAAGTAATACGTCT 57.597 33.333 0.00 0.00 38.42 4.18
578 2000 9.617975 ACTTACTACAAACAAGTAATACGTCTC 57.382 33.333 0.00 0.00 38.42 3.36
579 2001 8.970691 TTACTACAAACAAGTAATACGTCTCC 57.029 34.615 0.00 0.00 35.13 3.71
580 2002 6.985117 ACTACAAACAAGTAATACGTCTCCA 58.015 36.000 0.00 0.00 0.00 3.86
581 2003 6.865205 ACTACAAACAAGTAATACGTCTCCAC 59.135 38.462 0.00 0.00 0.00 4.02
582 2004 4.992951 ACAAACAAGTAATACGTCTCCACC 59.007 41.667 0.00 0.00 0.00 4.61
583 2005 3.881937 ACAAGTAATACGTCTCCACCC 57.118 47.619 0.00 0.00 0.00 4.61
584 2006 3.438183 ACAAGTAATACGTCTCCACCCT 58.562 45.455 0.00 0.00 0.00 4.34
585 2007 3.446516 ACAAGTAATACGTCTCCACCCTC 59.553 47.826 0.00 0.00 0.00 4.30
586 2008 2.664015 AGTAATACGTCTCCACCCTCC 58.336 52.381 0.00 0.00 0.00 4.30
587 2009 2.024655 AGTAATACGTCTCCACCCTCCA 60.025 50.000 0.00 0.00 0.00 3.86
588 2010 1.946984 AATACGTCTCCACCCTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
589 2011 1.946984 ATACGTCTCCACCCTCCAAA 58.053 50.000 0.00 0.00 0.00 3.28
590 2012 0.971386 TACGTCTCCACCCTCCAAAC 59.029 55.000 0.00 0.00 0.00 2.93
591 2013 1.374252 CGTCTCCACCCTCCAAACG 60.374 63.158 0.00 0.00 0.00 3.60
592 2014 1.812686 CGTCTCCACCCTCCAAACGA 61.813 60.000 0.00 0.00 0.00 3.85
593 2015 0.395312 GTCTCCACCCTCCAAACGAA 59.605 55.000 0.00 0.00 0.00 3.85
594 2016 1.003233 GTCTCCACCCTCCAAACGAAT 59.997 52.381 0.00 0.00 0.00 3.34
595 2017 1.702957 TCTCCACCCTCCAAACGAATT 59.297 47.619 0.00 0.00 0.00 2.17
596 2018 2.084546 CTCCACCCTCCAAACGAATTC 58.915 52.381 0.00 0.00 0.00 2.17
597 2019 1.422024 TCCACCCTCCAAACGAATTCA 59.578 47.619 6.22 0.00 0.00 2.57
598 2020 2.158593 TCCACCCTCCAAACGAATTCAA 60.159 45.455 6.22 0.00 0.00 2.69
599 2021 2.625790 CCACCCTCCAAACGAATTCAAA 59.374 45.455 6.22 0.00 0.00 2.69
600 2022 3.258123 CCACCCTCCAAACGAATTCAAAT 59.742 43.478 6.22 0.00 0.00 2.32
601 2023 4.485163 CACCCTCCAAACGAATTCAAATC 58.515 43.478 6.22 0.00 0.00 2.17
602 2024 3.509967 ACCCTCCAAACGAATTCAAATCC 59.490 43.478 6.22 0.00 0.00 3.01
603 2025 3.119137 CCCTCCAAACGAATTCAAATCCC 60.119 47.826 6.22 0.00 0.00 3.85
604 2026 3.509575 CCTCCAAACGAATTCAAATCCCA 59.490 43.478 6.22 0.00 0.00 4.37
605 2027 4.021544 CCTCCAAACGAATTCAAATCCCAA 60.022 41.667 6.22 0.00 0.00 4.12
606 2028 5.510520 CCTCCAAACGAATTCAAATCCCAAA 60.511 40.000 6.22 0.00 0.00 3.28
607 2029 5.293560 TCCAAACGAATTCAAATCCCAAAC 58.706 37.500 6.22 0.00 0.00 2.93
608 2030 5.053145 CCAAACGAATTCAAATCCCAAACA 58.947 37.500 6.22 0.00 0.00 2.83
609 2031 5.050431 CCAAACGAATTCAAATCCCAAACAC 60.050 40.000 6.22 0.00 0.00 3.32
610 2032 4.251543 ACGAATTCAAATCCCAAACACC 57.748 40.909 6.22 0.00 0.00 4.16
611 2033 3.639094 ACGAATTCAAATCCCAAACACCA 59.361 39.130 6.22 0.00 0.00 4.17
612 2034 4.100189 ACGAATTCAAATCCCAAACACCAA 59.900 37.500 6.22 0.00 0.00 3.67
613 2035 4.447389 CGAATTCAAATCCCAAACACCAAC 59.553 41.667 6.22 0.00 0.00 3.77
614 2036 3.828875 TTCAAATCCCAAACACCAACC 57.171 42.857 0.00 0.00 0.00 3.77
615 2037 2.043227 TCAAATCCCAAACACCAACCC 58.957 47.619 0.00 0.00 0.00 4.11
616 2038 1.071542 CAAATCCCAAACACCAACCCC 59.928 52.381 0.00 0.00 0.00 4.95
617 2039 0.565674 AATCCCAAACACCAACCCCT 59.434 50.000 0.00 0.00 0.00 4.79
618 2040 0.114364 ATCCCAAACACCAACCCCTC 59.886 55.000 0.00 0.00 0.00 4.30
619 2041 1.231641 CCCAAACACCAACCCCTCA 59.768 57.895 0.00 0.00 0.00 3.86
620 2042 0.397816 CCCAAACACCAACCCCTCAA 60.398 55.000 0.00 0.00 0.00 3.02
621 2043 1.490574 CCAAACACCAACCCCTCAAA 58.509 50.000 0.00 0.00 0.00 2.69
622 2044 1.834263 CCAAACACCAACCCCTCAAAA 59.166 47.619 0.00 0.00 0.00 2.44
623 2045 2.237392 CCAAACACCAACCCCTCAAAAA 59.763 45.455 0.00 0.00 0.00 1.94
624 2046 3.530535 CAAACACCAACCCCTCAAAAAG 58.469 45.455 0.00 0.00 0.00 2.27
625 2047 1.119684 ACACCAACCCCTCAAAAAGC 58.880 50.000 0.00 0.00 0.00 3.51
626 2048 0.392706 CACCAACCCCTCAAAAAGCC 59.607 55.000 0.00 0.00 0.00 4.35
627 2049 0.264657 ACCAACCCCTCAAAAAGCCT 59.735 50.000 0.00 0.00 0.00 4.58
628 2050 0.681175 CCAACCCCTCAAAAAGCCTG 59.319 55.000 0.00 0.00 0.00 4.85
629 2051 1.413118 CAACCCCTCAAAAAGCCTGT 58.587 50.000 0.00 0.00 0.00 4.00
630 2052 2.593026 CAACCCCTCAAAAAGCCTGTA 58.407 47.619 0.00 0.00 0.00 2.74
631 2053 2.558359 CAACCCCTCAAAAAGCCTGTAG 59.442 50.000 0.00 0.00 0.00 2.74
632 2054 1.075536 ACCCCTCAAAAAGCCTGTAGG 59.924 52.381 0.00 0.00 38.53 3.18
633 2055 1.354368 CCCCTCAAAAAGCCTGTAGGA 59.646 52.381 1.17 0.00 37.39 2.94
634 2056 2.619074 CCCCTCAAAAAGCCTGTAGGAG 60.619 54.545 1.17 0.00 37.39 3.69
635 2057 2.305927 CCCTCAAAAAGCCTGTAGGAGA 59.694 50.000 1.17 0.00 37.39 3.71
1011 2433 1.080498 AGTAGGGGGATGGAGTTCACA 59.920 52.381 0.00 0.00 0.00 3.58
1053 2475 1.519719 GTGCTGCTTCTCTCCCGAT 59.480 57.895 0.00 0.00 0.00 4.18
1158 2580 1.078637 GCCTGTTTCTCCCCCGTAC 60.079 63.158 0.00 0.00 0.00 3.67
1171 2593 1.238625 CCCGTACAATTGGGTTGCGT 61.239 55.000 10.83 0.00 41.69 5.24
1187 2609 1.983224 CGTGTCTGGGGTTCATCCT 59.017 57.895 0.00 0.00 36.25 3.24
1220 2642 1.027357 CTGGCGAATCTGGGATTTGG 58.973 55.000 8.89 0.75 0.00 3.28
1226 2648 2.388735 GAATCTGGGATTTGGGGTTCC 58.611 52.381 0.00 0.00 0.00 3.62
1284 2706 1.077915 GTGGAATGCGGCCAATTTTG 58.922 50.000 2.24 0.00 37.12 2.44
1286 2708 1.337635 TGGAATGCGGCCAATTTTGAC 60.338 47.619 2.24 0.00 31.13 3.18
1293 2715 0.100503 GGCCAATTTTGACCGATCCG 59.899 55.000 0.00 0.00 0.00 4.18
1294 2716 0.525455 GCCAATTTTGACCGATCCGC 60.525 55.000 0.00 0.00 0.00 5.54
1295 2717 0.808125 CCAATTTTGACCGATCCGCA 59.192 50.000 0.00 0.00 0.00 5.69
1296 2718 1.202177 CCAATTTTGACCGATCCGCAG 60.202 52.381 0.00 0.00 0.00 5.18
1297 2719 0.451783 AATTTTGACCGATCCGCAGC 59.548 50.000 0.00 0.00 0.00 5.25
1298 2720 0.392998 ATTTTGACCGATCCGCAGCT 60.393 50.000 0.00 0.00 0.00 4.24
1299 2721 0.605319 TTTTGACCGATCCGCAGCTT 60.605 50.000 0.00 0.00 0.00 3.74
1300 2722 0.248012 TTTGACCGATCCGCAGCTTA 59.752 50.000 0.00 0.00 0.00 3.09
1301 2723 0.179111 TTGACCGATCCGCAGCTTAG 60.179 55.000 0.00 0.00 0.00 2.18
1302 2724 1.320344 TGACCGATCCGCAGCTTAGT 61.320 55.000 0.00 0.00 0.00 2.24
1303 2725 0.179108 GACCGATCCGCAGCTTAGTT 60.179 55.000 0.00 0.00 0.00 2.24
1304 2726 0.179108 ACCGATCCGCAGCTTAGTTC 60.179 55.000 0.00 0.00 0.00 3.01
1305 2727 0.179111 CCGATCCGCAGCTTAGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
1306 2728 1.640428 CGATCCGCAGCTTAGTTCAA 58.360 50.000 0.00 0.00 0.00 2.69
1307 2729 2.205074 CGATCCGCAGCTTAGTTCAAT 58.795 47.619 0.00 0.00 0.00 2.57
1308 2730 2.609459 CGATCCGCAGCTTAGTTCAATT 59.391 45.455 0.00 0.00 0.00 2.32
1309 2731 3.063997 CGATCCGCAGCTTAGTTCAATTT 59.936 43.478 0.00 0.00 0.00 1.82
1310 2732 4.437390 CGATCCGCAGCTTAGTTCAATTTT 60.437 41.667 0.00 0.00 0.00 1.82
1314 2736 3.914364 CGCAGCTTAGTTCAATTTTGACC 59.086 43.478 0.00 0.00 36.83 4.02
1378 2800 3.253230 TGCCATAGCATATGAATCGACG 58.747 45.455 6.97 0.00 46.52 5.12
1430 2852 6.894828 TCGCTTTAACAAACATTTAGGTCTC 58.105 36.000 0.00 0.00 0.00 3.36
1507 2934 1.195448 CTACTTGCCTTGCTGTTGTCG 59.805 52.381 0.00 0.00 0.00 4.35
1508 2935 1.370900 CTTGCCTTGCTGTTGTCGC 60.371 57.895 0.00 0.00 0.00 5.19
1529 2980 4.100529 GCGGATGATTCAACATTGACTTG 58.899 43.478 0.00 0.00 36.83 3.16
1548 2999 3.319137 TGTGTCTCCTACAACATCTGC 57.681 47.619 0.00 0.00 40.63 4.26
1585 3038 7.327214 TCACATTATTTAAGGGGTCAATTTGC 58.673 34.615 0.00 0.00 0.00 3.68
1593 3046 1.734117 GGTCAATTTGCGGCTGTGC 60.734 57.895 0.00 0.00 0.00 4.57
1594 3047 1.007502 GTCAATTTGCGGCTGTGCA 60.008 52.632 0.00 0.00 44.61 4.57
1595 3048 0.388907 GTCAATTTGCGGCTGTGCAT 60.389 50.000 0.00 0.00 45.78 3.96
1596 3049 0.317799 TCAATTTGCGGCTGTGCATT 59.682 45.000 0.00 0.00 45.78 3.56
1597 3050 1.149987 CAATTTGCGGCTGTGCATTT 58.850 45.000 0.00 0.00 45.78 2.32
1598 3051 1.127213 CAATTTGCGGCTGTGCATTTC 59.873 47.619 0.00 0.00 45.78 2.17
1599 3052 0.317799 ATTTGCGGCTGTGCATTTCA 59.682 45.000 0.00 0.00 45.78 2.69
1600 3053 0.317799 TTTGCGGCTGTGCATTTCAT 59.682 45.000 0.00 0.00 45.78 2.57
1601 3054 0.109179 TTGCGGCTGTGCATTTCATC 60.109 50.000 0.00 0.00 45.78 2.92
1602 3055 1.584483 GCGGCTGTGCATTTCATCG 60.584 57.895 0.00 0.00 34.15 3.84
1603 3056 1.796151 CGGCTGTGCATTTCATCGT 59.204 52.632 0.00 0.00 0.00 3.73
1604 3057 1.006086 CGGCTGTGCATTTCATCGTA 58.994 50.000 0.00 0.00 0.00 3.43
1605 3058 1.267532 CGGCTGTGCATTTCATCGTAC 60.268 52.381 0.00 0.00 0.00 3.67
1606 3059 2.009774 GGCTGTGCATTTCATCGTACT 58.990 47.619 0.00 0.00 0.00 2.73
1607 3060 3.194861 GGCTGTGCATTTCATCGTACTA 58.805 45.455 0.00 0.00 0.00 1.82
1608 3061 3.246226 GGCTGTGCATTTCATCGTACTAG 59.754 47.826 0.00 0.00 0.00 2.57
1609 3062 3.865745 GCTGTGCATTTCATCGTACTAGT 59.134 43.478 0.00 0.00 0.00 2.57
1610 3063 4.330074 GCTGTGCATTTCATCGTACTAGTT 59.670 41.667 0.00 0.00 0.00 2.24
1611 3064 5.725042 GCTGTGCATTTCATCGTACTAGTTG 60.725 44.000 0.00 0.00 0.00 3.16
1612 3065 4.629634 TGTGCATTTCATCGTACTAGTTGG 59.370 41.667 0.00 0.00 0.00 3.77
1613 3066 4.868171 GTGCATTTCATCGTACTAGTTGGA 59.132 41.667 0.00 0.00 0.00 3.53
1614 3067 5.523916 GTGCATTTCATCGTACTAGTTGGAT 59.476 40.000 0.00 1.34 0.00 3.41
1615 3068 5.753438 TGCATTTCATCGTACTAGTTGGATC 59.247 40.000 0.00 0.00 0.00 3.36
1616 3069 5.177696 GCATTTCATCGTACTAGTTGGATCC 59.822 44.000 4.20 4.20 0.00 3.36
1617 3070 4.563337 TTCATCGTACTAGTTGGATCCG 57.437 45.455 7.39 0.00 0.00 4.18
1618 3071 3.812262 TCATCGTACTAGTTGGATCCGA 58.188 45.455 7.39 1.27 0.00 4.55
1619 3072 3.813724 TCATCGTACTAGTTGGATCCGAG 59.186 47.826 7.39 4.31 0.00 4.63
1620 3073 3.548745 TCGTACTAGTTGGATCCGAGA 57.451 47.619 7.39 0.00 0.00 4.04
1621 3074 3.877559 TCGTACTAGTTGGATCCGAGAA 58.122 45.455 7.39 0.00 0.00 2.87
1622 3075 4.264253 TCGTACTAGTTGGATCCGAGAAA 58.736 43.478 7.39 0.00 0.00 2.52
1623 3076 4.885907 TCGTACTAGTTGGATCCGAGAAAT 59.114 41.667 7.39 0.00 0.00 2.17
1624 3077 5.359009 TCGTACTAGTTGGATCCGAGAAATT 59.641 40.000 7.39 0.00 0.00 1.82
1625 3078 5.459107 CGTACTAGTTGGATCCGAGAAATTG 59.541 44.000 7.39 0.00 0.00 2.32
1626 3079 5.422214 ACTAGTTGGATCCGAGAAATTGT 57.578 39.130 7.39 0.00 0.00 2.71
1627 3080 5.178797 ACTAGTTGGATCCGAGAAATTGTG 58.821 41.667 7.39 0.00 0.00 3.33
1628 3081 3.347216 AGTTGGATCCGAGAAATTGTGG 58.653 45.455 7.39 0.00 0.00 4.17
1629 3082 3.081804 GTTGGATCCGAGAAATTGTGGT 58.918 45.455 7.39 0.00 0.00 4.16
1630 3083 4.019681 AGTTGGATCCGAGAAATTGTGGTA 60.020 41.667 7.39 0.00 0.00 3.25
1631 3084 4.771114 TGGATCCGAGAAATTGTGGTAT 57.229 40.909 7.39 0.00 0.00 2.73
1632 3085 4.703897 TGGATCCGAGAAATTGTGGTATC 58.296 43.478 7.39 0.00 0.00 2.24
1633 3086 4.163268 TGGATCCGAGAAATTGTGGTATCA 59.837 41.667 7.39 0.00 0.00 2.15
1676 3150 6.651975 ATACGGGGTTTTGTTTTTCATGTA 57.348 33.333 0.00 0.00 0.00 2.29
1705 3179 0.105593 ATAGGTGCATCTGGTCTGCG 59.894 55.000 10.55 0.00 42.62 5.18
1707 3181 2.435586 GTGCATCTGGTCTGCGCT 60.436 61.111 9.73 0.00 44.63 5.92
1935 3412 6.855914 TGCGTTATCATTTCAACTTTGAAGAC 59.144 34.615 4.66 0.00 46.68 3.01
2417 4058 3.067461 GTGTTCATGTACAGTGGCCAAAA 59.933 43.478 7.24 0.00 0.00 2.44
2444 4085 1.264288 GCCAGAGGTGTTTCTTTCACG 59.736 52.381 0.00 0.00 36.76 4.35
2541 4182 4.599241 CCTGGGAGATAATGGGTGTATTCT 59.401 45.833 0.00 0.00 0.00 2.40
2748 4389 7.402448 AGTTACCCCCTTTGCTATATTATGT 57.598 36.000 0.00 0.00 0.00 2.29
2975 4616 3.502211 CCCAAACTGGTACTTGATGACAC 59.498 47.826 0.00 0.00 35.17 3.67
2988 4629 4.241590 TGATGACACAACTGAATTTGGC 57.758 40.909 0.00 0.00 0.00 4.52
3044 4685 7.148656 GGTTTTAATGATTGACCAATTGGAACG 60.149 37.037 31.22 4.59 38.94 3.95
3140 4781 4.036852 GCTCACCCTCACATTTTTATAGCC 59.963 45.833 0.00 0.00 0.00 3.93
3169 4810 9.014297 ACCAATCTTGTATTCAACTCTTAAAGG 57.986 33.333 0.00 0.00 0.00 3.11
3203 4845 7.881232 TGTTTCCTAGACGAAAAATTAGGTGAT 59.119 33.333 0.00 0.00 33.68 3.06
3756 5428 6.152661 TGTTCACCCATTCATCATACCTTTTC 59.847 38.462 0.00 0.00 0.00 2.29
3889 5561 4.411540 ACAAGAGCATATTCTGGGACATCT 59.588 41.667 0.00 0.00 38.20 2.90
3937 5612 5.059833 ACTTGTAAGCTCAACCTTTCTGAG 58.940 41.667 0.00 0.00 42.73 3.35
3944 5619 1.946768 TCAACCTTTCTGAGTTTGGCG 59.053 47.619 0.00 0.00 0.00 5.69
4147 5950 7.549134 TGGTGTAGAGAATACATTACTTTGCAG 59.451 37.037 0.00 0.00 0.00 4.41
4231 6034 3.893813 GGGCGGTCTCCTCTAGTATTTTA 59.106 47.826 0.00 0.00 0.00 1.52
4233 6036 5.471257 GGCGGTCTCCTCTAGTATTTTATG 58.529 45.833 0.00 0.00 0.00 1.90
4244 6047 9.057089 CCTCTAGTATTTTATGGATTTGTGGAC 57.943 37.037 0.00 0.00 0.00 4.02
4249 6052 9.174166 AGTATTTTATGGATTTGTGGACACTAC 57.826 33.333 3.91 0.00 0.00 2.73
4290 6093 8.402798 AGAACATACATAACCAAATTGACACA 57.597 30.769 0.00 0.00 0.00 3.72
4307 6110 4.039004 TGACACATTGTATGCTGCCTTTTT 59.961 37.500 0.00 0.00 0.00 1.94
4488 6291 3.560453 CCCCAAACAAGGAATCGGTTAGA 60.560 47.826 0.00 0.00 0.00 2.10
4598 6401 2.572104 ACCAACAGTCCCTTAGGTGATC 59.428 50.000 0.00 0.00 0.00 2.92
4604 6407 3.131933 CAGTCCCTTAGGTGATCTGTCTG 59.868 52.174 0.00 0.00 0.00 3.51
4623 6426 6.475504 TGTCTGGCTGATTCTCAAAATTCTA 58.524 36.000 0.00 0.00 0.00 2.10
4624 6427 6.372659 TGTCTGGCTGATTCTCAAAATTCTAC 59.627 38.462 0.00 0.00 0.00 2.59
4625 6428 6.597280 GTCTGGCTGATTCTCAAAATTCTACT 59.403 38.462 0.00 0.00 0.00 2.57
4626 6429 6.596888 TCTGGCTGATTCTCAAAATTCTACTG 59.403 38.462 0.00 0.00 0.00 2.74
4627 6430 5.124457 TGGCTGATTCTCAAAATTCTACTGC 59.876 40.000 0.00 0.00 0.00 4.40
4628 6431 5.449725 GGCTGATTCTCAAAATTCTACTGCC 60.450 44.000 0.00 0.00 34.14 4.85
4629 6432 5.356470 GCTGATTCTCAAAATTCTACTGCCT 59.644 40.000 0.00 0.00 0.00 4.75
4630 6433 6.458070 GCTGATTCTCAAAATTCTACTGCCTC 60.458 42.308 0.00 0.00 0.00 4.70
4631 6434 5.882557 TGATTCTCAAAATTCTACTGCCTCC 59.117 40.000 0.00 0.00 0.00 4.30
4632 6435 4.908601 TCTCAAAATTCTACTGCCTCCA 57.091 40.909 0.00 0.00 0.00 3.86
4633 6436 5.441718 TCTCAAAATTCTACTGCCTCCAT 57.558 39.130 0.00 0.00 0.00 3.41
4634 6437 5.431765 TCTCAAAATTCTACTGCCTCCATC 58.568 41.667 0.00 0.00 0.00 3.51
4635 6438 4.526970 TCAAAATTCTACTGCCTCCATCC 58.473 43.478 0.00 0.00 0.00 3.51
4636 6439 4.018506 TCAAAATTCTACTGCCTCCATCCA 60.019 41.667 0.00 0.00 0.00 3.41
4637 6440 4.803329 AAATTCTACTGCCTCCATCCAT 57.197 40.909 0.00 0.00 0.00 3.41
4638 6441 5.912149 AAATTCTACTGCCTCCATCCATA 57.088 39.130 0.00 0.00 0.00 2.74
4639 6442 6.460103 AAATTCTACTGCCTCCATCCATAT 57.540 37.500 0.00 0.00 0.00 1.78
4640 6443 7.574021 AAATTCTACTGCCTCCATCCATATA 57.426 36.000 0.00 0.00 0.00 0.86
4641 6444 7.761981 AATTCTACTGCCTCCATCCATATAT 57.238 36.000 0.00 0.00 0.00 0.86
4642 6445 8.860517 AATTCTACTGCCTCCATCCATATATA 57.139 34.615 0.00 0.00 0.00 0.86
4643 6446 7.904558 TTCTACTGCCTCCATCCATATATAG 57.095 40.000 0.00 0.00 0.00 1.31
4644 6447 7.226059 TCTACTGCCTCCATCCATATATAGA 57.774 40.000 0.00 0.00 0.00 1.98
4645 6448 7.293828 TCTACTGCCTCCATCCATATATAGAG 58.706 42.308 0.00 0.00 0.00 2.43
4646 6449 4.653341 ACTGCCTCCATCCATATATAGAGC 59.347 45.833 0.00 0.00 0.00 4.09
4647 6450 3.638627 TGCCTCCATCCATATATAGAGCG 59.361 47.826 0.00 0.00 0.00 5.03
4648 6451 3.553922 GCCTCCATCCATATATAGAGCGC 60.554 52.174 0.00 0.00 0.00 5.92
4649 6452 3.006323 CCTCCATCCATATATAGAGCGCC 59.994 52.174 2.29 0.00 0.00 6.53
4650 6453 3.894427 CTCCATCCATATATAGAGCGCCT 59.106 47.826 2.29 3.28 0.00 5.52
4651 6454 5.061721 TCCATCCATATATAGAGCGCCTA 57.938 43.478 2.29 5.86 0.00 3.93
4652 6455 5.454966 TCCATCCATATATAGAGCGCCTAA 58.545 41.667 2.29 0.00 0.00 2.69
4653 6456 6.077993 TCCATCCATATATAGAGCGCCTAAT 58.922 40.000 2.29 0.00 0.00 1.73
4654 6457 6.015095 TCCATCCATATATAGAGCGCCTAATG 60.015 42.308 2.29 6.46 0.00 1.90
4655 6458 5.201713 TCCATATATAGAGCGCCTAATGC 57.798 43.478 2.29 0.00 0.00 3.56
4667 6470 3.675467 GCCTAATGCGTTTTTCGAGAT 57.325 42.857 0.00 0.00 42.86 2.75
4668 6471 4.016113 GCCTAATGCGTTTTTCGAGATT 57.984 40.909 0.00 0.00 42.86 2.40
4669 6472 3.786048 GCCTAATGCGTTTTTCGAGATTG 59.214 43.478 0.00 0.00 42.86 2.67
4670 6473 3.786048 CCTAATGCGTTTTTCGAGATTGC 59.214 43.478 0.00 0.00 42.86 3.56
4671 6474 2.262572 ATGCGTTTTTCGAGATTGCC 57.737 45.000 0.00 0.00 42.86 4.52
4672 6475 1.234821 TGCGTTTTTCGAGATTGCCT 58.765 45.000 0.00 0.00 42.86 4.75
4673 6476 1.606668 TGCGTTTTTCGAGATTGCCTT 59.393 42.857 0.00 0.00 42.86 4.35
4674 6477 2.034053 TGCGTTTTTCGAGATTGCCTTT 59.966 40.909 0.00 0.00 42.86 3.11
4675 6478 2.405025 GCGTTTTTCGAGATTGCCTTTG 59.595 45.455 0.00 0.00 42.86 2.77
4676 6479 3.851838 GCGTTTTTCGAGATTGCCTTTGA 60.852 43.478 0.00 0.00 42.86 2.69
4677 6480 3.664025 CGTTTTTCGAGATTGCCTTTGAC 59.336 43.478 0.00 0.00 42.86 3.18
4678 6481 4.554723 CGTTTTTCGAGATTGCCTTTGACT 60.555 41.667 0.00 0.00 42.86 3.41
4679 6482 4.749245 TTTTCGAGATTGCCTTTGACTC 57.251 40.909 0.00 0.00 0.00 3.36
4680 6483 3.685139 TTCGAGATTGCCTTTGACTCT 57.315 42.857 0.00 0.00 0.00 3.24
4681 6484 3.685139 TCGAGATTGCCTTTGACTCTT 57.315 42.857 0.00 0.00 0.00 2.85
4682 6485 3.329386 TCGAGATTGCCTTTGACTCTTG 58.671 45.455 0.00 0.00 0.00 3.02
4683 6486 3.006859 TCGAGATTGCCTTTGACTCTTGA 59.993 43.478 0.00 0.00 0.00 3.02
4684 6487 3.937706 CGAGATTGCCTTTGACTCTTGAT 59.062 43.478 0.00 0.00 0.00 2.57
4685 6488 4.201792 CGAGATTGCCTTTGACTCTTGATG 60.202 45.833 0.00 0.00 0.00 3.07
4686 6489 4.914983 AGATTGCCTTTGACTCTTGATGA 58.085 39.130 0.00 0.00 0.00 2.92
4687 6490 4.699257 AGATTGCCTTTGACTCTTGATGAC 59.301 41.667 0.00 0.00 0.00 3.06
4688 6491 3.490439 TGCCTTTGACTCTTGATGACA 57.510 42.857 0.00 0.00 0.00 3.58
4689 6492 4.025040 TGCCTTTGACTCTTGATGACAT 57.975 40.909 0.00 0.00 0.00 3.06
4690 6493 4.401022 TGCCTTTGACTCTTGATGACATT 58.599 39.130 0.00 0.00 0.00 2.71
4691 6494 5.559770 TGCCTTTGACTCTTGATGACATTA 58.440 37.500 0.00 0.00 0.00 1.90
4692 6495 6.003326 TGCCTTTGACTCTTGATGACATTAA 58.997 36.000 0.00 0.00 0.00 1.40
4693 6496 6.660521 TGCCTTTGACTCTTGATGACATTAAT 59.339 34.615 0.00 0.00 0.00 1.40
4694 6497 7.828717 TGCCTTTGACTCTTGATGACATTAATA 59.171 33.333 0.00 0.00 0.00 0.98
4695 6498 8.341173 GCCTTTGACTCTTGATGACATTAATAG 58.659 37.037 4.41 4.41 0.00 1.73
4696 6499 9.388506 CCTTTGACTCTTGATGACATTAATAGT 57.611 33.333 9.79 9.79 0.00 2.12
4749 6552 8.918202 ATCATTGTAAGTTCCTTTCAAGTACA 57.082 30.769 0.00 0.00 35.07 2.90
4750 6553 8.740123 TCATTGTAAGTTCCTTTCAAGTACAA 57.260 30.769 0.00 0.00 35.07 2.41
4751 6554 9.179909 TCATTGTAAGTTCCTTTCAAGTACAAA 57.820 29.630 0.00 0.00 35.07 2.83
4752 6555 9.965824 CATTGTAAGTTCCTTTCAAGTACAAAT 57.034 29.630 0.00 0.00 35.07 2.32
4755 6558 9.796120 TGTAAGTTCCTTTCAAGTACAAATTTG 57.204 29.630 16.67 16.67 0.00 2.32
4757 6560 8.926715 AAGTTCCTTTCAAGTACAAATTTGAC 57.073 30.769 24.64 16.60 31.73 3.18
4758 6561 7.193595 AGTTCCTTTCAAGTACAAATTTGACG 58.806 34.615 24.64 7.75 31.73 4.35
4759 6562 6.067263 TCCTTTCAAGTACAAATTTGACGG 57.933 37.500 24.64 14.18 31.73 4.79
4760 6563 5.591067 TCCTTTCAAGTACAAATTTGACGGT 59.409 36.000 24.64 4.75 31.73 4.83
4761 6564 6.766944 TCCTTTCAAGTACAAATTTGACGGTA 59.233 34.615 24.64 3.73 31.73 4.02
4762 6565 7.446013 TCCTTTCAAGTACAAATTTGACGGTAT 59.554 33.333 24.64 3.62 31.73 2.73
4763 6566 7.537306 CCTTTCAAGTACAAATTTGACGGTATG 59.463 37.037 24.64 13.99 31.73 2.39
4764 6567 5.933790 TCAAGTACAAATTTGACGGTATGC 58.066 37.500 24.64 4.81 0.00 3.14
4765 6568 5.703592 TCAAGTACAAATTTGACGGTATGCT 59.296 36.000 24.64 7.05 0.00 3.79
4766 6569 6.205853 TCAAGTACAAATTTGACGGTATGCTT 59.794 34.615 24.64 12.40 0.00 3.91
4767 6570 6.569179 AGTACAAATTTGACGGTATGCTTT 57.431 33.333 24.64 0.17 0.00 3.51
4768 6571 6.378582 AGTACAAATTTGACGGTATGCTTTG 58.621 36.000 24.64 0.00 0.00 2.77
4769 6572 5.195001 ACAAATTTGACGGTATGCTTTGT 57.805 34.783 24.64 0.00 32.26 2.83
4770 6573 4.981674 ACAAATTTGACGGTATGCTTTGTG 59.018 37.500 24.64 0.00 34.92 3.33
4771 6574 4.846779 AATTTGACGGTATGCTTTGTGT 57.153 36.364 0.00 0.00 0.00 3.72
4772 6575 5.950758 AATTTGACGGTATGCTTTGTGTA 57.049 34.783 0.00 0.00 0.00 2.90
4773 6576 5.950758 ATTTGACGGTATGCTTTGTGTAA 57.049 34.783 0.00 0.00 0.00 2.41
4774 6577 4.735662 TTGACGGTATGCTTTGTGTAAC 57.264 40.909 0.00 0.00 37.35 2.50
4775 6578 3.997762 TGACGGTATGCTTTGTGTAACT 58.002 40.909 0.00 0.00 38.04 2.24
4776 6579 4.382291 TGACGGTATGCTTTGTGTAACTT 58.618 39.130 0.00 0.00 38.04 2.66
4777 6580 4.212425 TGACGGTATGCTTTGTGTAACTTG 59.788 41.667 0.00 0.00 38.04 3.16
4778 6581 3.058501 ACGGTATGCTTTGTGTAACTTGC 60.059 43.478 0.00 0.00 38.04 4.01
4779 6582 3.058570 CGGTATGCTTTGTGTAACTTGCA 60.059 43.478 0.00 0.00 39.97 4.08
4780 6583 4.379394 CGGTATGCTTTGTGTAACTTGCAT 60.379 41.667 0.00 0.00 44.54 3.96
4781 6584 4.858692 GGTATGCTTTGTGTAACTTGCATG 59.141 41.667 8.29 0.00 43.24 4.06
4782 6585 4.589216 ATGCTTTGTGTAACTTGCATGT 57.411 36.364 0.00 0.00 42.42 3.21
4783 6586 3.963665 TGCTTTGTGTAACTTGCATGTC 58.036 40.909 5.61 0.00 38.04 3.06
4784 6587 3.379688 TGCTTTGTGTAACTTGCATGTCA 59.620 39.130 5.61 0.00 38.04 3.58
4785 6588 4.037803 TGCTTTGTGTAACTTGCATGTCAT 59.962 37.500 5.61 0.00 38.04 3.06
4786 6589 5.240403 TGCTTTGTGTAACTTGCATGTCATA 59.760 36.000 5.61 0.00 38.04 2.15
4787 6590 6.072008 TGCTTTGTGTAACTTGCATGTCATAT 60.072 34.615 5.61 0.00 38.04 1.78
4788 6591 7.120432 TGCTTTGTGTAACTTGCATGTCATATA 59.880 33.333 5.61 0.00 38.04 0.86
4789 6592 8.131100 GCTTTGTGTAACTTGCATGTCATATAT 58.869 33.333 5.61 0.00 38.04 0.86
4791 6594 9.786105 TTTGTGTAACTTGCATGTCATATATTG 57.214 29.630 5.61 0.00 38.04 1.90
4792 6595 8.504812 TGTGTAACTTGCATGTCATATATTGT 57.495 30.769 5.61 0.00 38.04 2.71
4793 6596 8.955388 TGTGTAACTTGCATGTCATATATTGTT 58.045 29.630 5.61 0.00 38.04 2.83
4794 6597 9.225201 GTGTAACTTGCATGTCATATATTGTTG 57.775 33.333 5.61 0.00 0.00 3.33
4795 6598 7.914871 TGTAACTTGCATGTCATATATTGTTGC 59.085 33.333 5.61 0.00 0.00 4.17
4796 6599 6.704289 ACTTGCATGTCATATATTGTTGCT 57.296 33.333 0.00 0.00 32.12 3.91
4797 6600 6.732154 ACTTGCATGTCATATATTGTTGCTC 58.268 36.000 0.00 0.00 32.12 4.26
4798 6601 6.544931 ACTTGCATGTCATATATTGTTGCTCT 59.455 34.615 0.00 0.00 32.12 4.09
4799 6602 7.716560 ACTTGCATGTCATATATTGTTGCTCTA 59.283 33.333 0.00 0.00 32.12 2.43
4800 6603 8.449251 TTGCATGTCATATATTGTTGCTCTAA 57.551 30.769 0.00 0.00 32.12 2.10
4801 6604 7.864686 TGCATGTCATATATTGTTGCTCTAAC 58.135 34.615 0.00 0.00 39.80 2.34
4810 6613 3.483808 TGTTGCTCTAACATGTGGTCA 57.516 42.857 0.00 0.00 44.07 4.02
4811 6614 3.814625 TGTTGCTCTAACATGTGGTCAA 58.185 40.909 0.00 2.92 44.07 3.18
4812 6615 4.203226 TGTTGCTCTAACATGTGGTCAAA 58.797 39.130 0.00 0.00 44.07 2.69
4813 6616 4.275689 TGTTGCTCTAACATGTGGTCAAAG 59.724 41.667 0.00 0.00 44.07 2.77
4814 6617 4.085357 TGCTCTAACATGTGGTCAAAGT 57.915 40.909 0.00 0.00 0.00 2.66
4815 6618 4.460263 TGCTCTAACATGTGGTCAAAGTT 58.540 39.130 0.00 0.00 33.10 2.66
4816 6619 5.616270 TGCTCTAACATGTGGTCAAAGTTA 58.384 37.500 0.00 0.00 31.69 2.24
4817 6620 5.700832 TGCTCTAACATGTGGTCAAAGTTAG 59.299 40.000 0.00 0.00 41.76 2.34
4818 6621 5.390991 GCTCTAACATGTGGTCAAAGTTAGC 60.391 44.000 0.00 0.00 41.08 3.09
4819 6622 5.001232 TCTAACATGTGGTCAAAGTTAGCC 58.999 41.667 0.00 0.00 41.08 3.93
4820 6623 3.508845 ACATGTGGTCAAAGTTAGCCT 57.491 42.857 0.00 0.00 0.00 4.58
4821 6624 3.832527 ACATGTGGTCAAAGTTAGCCTT 58.167 40.909 0.00 0.00 33.79 4.35
4822 6625 3.569701 ACATGTGGTCAAAGTTAGCCTTG 59.430 43.478 0.00 0.00 32.32 3.61
4823 6626 3.569194 TGTGGTCAAAGTTAGCCTTGA 57.431 42.857 0.00 0.00 32.32 3.02
4824 6627 3.892284 TGTGGTCAAAGTTAGCCTTGAA 58.108 40.909 0.00 0.00 32.32 2.69
4825 6628 4.274147 TGTGGTCAAAGTTAGCCTTGAAA 58.726 39.130 0.00 0.00 32.32 2.69
4826 6629 4.707448 TGTGGTCAAAGTTAGCCTTGAAAA 59.293 37.500 0.00 0.00 32.32 2.29
4827 6630 5.186021 TGTGGTCAAAGTTAGCCTTGAAAAA 59.814 36.000 0.00 0.00 32.32 1.94
4828 6631 5.518847 GTGGTCAAAGTTAGCCTTGAAAAAC 59.481 40.000 0.00 0.00 32.32 2.43
4829 6632 5.186021 TGGTCAAAGTTAGCCTTGAAAAACA 59.814 36.000 0.00 0.00 32.32 2.83
4830 6633 5.518847 GGTCAAAGTTAGCCTTGAAAAACAC 59.481 40.000 0.00 0.00 32.32 3.32
4831 6634 6.096695 GTCAAAGTTAGCCTTGAAAAACACA 58.903 36.000 0.00 0.00 32.32 3.72
4832 6635 6.756542 GTCAAAGTTAGCCTTGAAAAACACAT 59.243 34.615 0.00 0.00 32.32 3.21
4833 6636 7.277760 GTCAAAGTTAGCCTTGAAAAACACATT 59.722 33.333 0.00 0.00 32.32 2.71
4834 6637 8.470805 TCAAAGTTAGCCTTGAAAAACACATTA 58.529 29.630 0.00 0.00 32.32 1.90
4835 6638 8.755018 CAAAGTTAGCCTTGAAAAACACATTAG 58.245 33.333 0.00 0.00 32.32 1.73
4836 6639 6.981722 AGTTAGCCTTGAAAAACACATTAGG 58.018 36.000 0.00 0.00 0.00 2.69
4837 6640 4.257267 AGCCTTGAAAAACACATTAGGC 57.743 40.909 0.00 0.00 44.55 3.93
4838 6641 3.006859 AGCCTTGAAAAACACATTAGGCC 59.993 43.478 0.00 0.00 45.01 5.19
4839 6642 3.864540 GCCTTGAAAAACACATTAGGCCC 60.865 47.826 0.00 0.00 40.77 5.80
4840 6643 3.578282 CCTTGAAAAACACATTAGGCCCT 59.422 43.478 0.00 0.00 0.00 5.19
4841 6644 4.770010 CCTTGAAAAACACATTAGGCCCTA 59.230 41.667 0.00 0.00 0.00 3.53
4842 6645 5.422012 CCTTGAAAAACACATTAGGCCCTAT 59.578 40.000 0.00 0.00 0.00 2.57
4843 6646 6.605594 CCTTGAAAAACACATTAGGCCCTATA 59.394 38.462 0.00 0.00 0.00 1.31
4844 6647 7.287696 CCTTGAAAAACACATTAGGCCCTATAT 59.712 37.037 0.00 0.00 0.00 0.86
4845 6648 9.349713 CTTGAAAAACACATTAGGCCCTATATA 57.650 33.333 0.00 0.00 0.00 0.86
4846 6649 9.875708 TTGAAAAACACATTAGGCCCTATATAT 57.124 29.630 0.00 0.00 0.00 0.86
4850 6653 9.920946 AAAACACATTAGGCCCTATATATATGG 57.079 33.333 0.00 9.17 0.00 2.74
4851 6654 8.869986 AACACATTAGGCCCTATATATATGGA 57.130 34.615 16.00 0.00 0.00 3.41
4852 6655 9.465704 AACACATTAGGCCCTATATATATGGAT 57.534 33.333 16.00 7.53 0.00 3.41
4902 6705 7.849804 AGAATCAGTGTGTTGTATTATGGAC 57.150 36.000 0.00 0.00 0.00 4.02
5061 6864 1.084289 GGAACGACAACATGCCTACC 58.916 55.000 0.00 0.00 0.00 3.18
5262 7065 3.128938 ACTTCCGGATAGTCGACTTGAAG 59.871 47.826 25.44 24.65 33.86 3.02
5328 7131 3.656243 CTGCTGTGCCGCAATCGTG 62.656 63.158 0.00 0.00 39.80 4.35
5332 7135 3.047280 GTGCCGCAATCGTGTCCA 61.047 61.111 0.00 0.00 0.00 4.02
5433 7236 7.537715 TGTCAGTTTGAATTGTAGCCATTATG 58.462 34.615 0.00 0.00 0.00 1.90
5510 7313 3.574749 TCTGATCTGGAAGGATGAGGAG 58.425 50.000 0.00 0.00 29.99 3.69
5537 7340 7.364522 CGGAAGATGATTGTTTCTTCTGTTA 57.635 36.000 11.55 0.00 44.71 2.41
5538 7341 7.237173 CGGAAGATGATTGTTTCTTCTGTTAC 58.763 38.462 11.55 0.00 44.71 2.50
5539 7342 7.530863 GGAAGATGATTGTTTCTTCTGTTACC 58.469 38.462 11.25 0.00 44.66 2.85
5655 7458 0.322816 TCTCCCTGTGCTGAAATGGC 60.323 55.000 0.00 0.00 0.00 4.40
5754 7561 2.309528 AATATGGCTTGCTTCGACGA 57.690 45.000 0.00 0.00 0.00 4.20
5775 7582 2.584418 CGGCGACTGATCCAGCAG 60.584 66.667 0.00 0.00 41.63 4.24
5792 7599 2.092103 AGCAGGTGGTTAACTTTGTCCA 60.092 45.455 5.42 0.00 0.00 4.02
5798 7605 3.003378 GTGGTTAACTTTGTCCAGCTGTC 59.997 47.826 13.81 6.09 0.00 3.51
5810 7617 1.479323 CCAGCTGTCAATGAAATGGGG 59.521 52.381 13.81 0.00 0.00 4.96
5813 7620 3.094572 AGCTGTCAATGAAATGGGGAAG 58.905 45.455 0.00 0.00 0.00 3.46
5846 7653 6.532657 TCTTATTAGGTAAACTAGCAACGTGC 59.467 38.462 0.00 0.00 45.46 5.34
5855 7662 2.353030 GCAACGTGCGAACCAACC 60.353 61.111 0.00 0.00 31.71 3.77
5874 7681 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
5880 7687 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
5920 10144 1.147817 AGGGTTCAAATCCTGGTGCTT 59.852 47.619 0.00 0.00 38.36 3.91
5926 10150 3.429492 TCAAATCCTGGTGCTTGCATTA 58.571 40.909 0.00 0.00 0.00 1.90
5927 10151 4.025360 TCAAATCCTGGTGCTTGCATTAT 58.975 39.130 0.00 0.00 0.00 1.28
5929 10153 4.660789 AATCCTGGTGCTTGCATTATTC 57.339 40.909 0.00 0.00 0.00 1.75
5932 10156 2.032550 CCTGGTGCTTGCATTATTCTCG 59.967 50.000 0.00 0.00 0.00 4.04
5933 10157 2.679837 CTGGTGCTTGCATTATTCTCGT 59.320 45.455 0.00 0.00 0.00 4.18
5936 10160 4.697828 TGGTGCTTGCATTATTCTCGTAAA 59.302 37.500 0.00 0.00 0.00 2.01
5938 10162 5.909610 GGTGCTTGCATTATTCTCGTAAATC 59.090 40.000 0.00 0.00 0.00 2.17
5939 10163 6.238484 GGTGCTTGCATTATTCTCGTAAATCT 60.238 38.462 0.00 0.00 0.00 2.40
5940 10164 6.848296 GTGCTTGCATTATTCTCGTAAATCTC 59.152 38.462 0.00 0.00 0.00 2.75
5941 10165 6.538381 TGCTTGCATTATTCTCGTAAATCTCA 59.462 34.615 0.00 0.00 0.00 3.27
5942 10166 7.065683 TGCTTGCATTATTCTCGTAAATCTCAA 59.934 33.333 0.00 0.00 0.00 3.02
5943 10167 7.585573 GCTTGCATTATTCTCGTAAATCTCAAG 59.414 37.037 0.00 0.00 0.00 3.02
5954 10178 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
5964 10188 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
5967 10191 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
5993 10217 1.970226 GCTCATAGGGGTAGGGTGTGT 60.970 57.143 0.00 0.00 0.00 3.72
5998 10222 0.191563 AGGGGTAGGGTGTGTGTGTA 59.808 55.000 0.00 0.00 0.00 2.90
6036 10260 3.972403 AGTGTATGCGCGTGTATATGAA 58.028 40.909 13.61 0.00 0.00 2.57
6052 10276 2.882927 TGAACGCTTGTGTCTGTACT 57.117 45.000 0.00 0.00 0.00 2.73
6054 10278 2.100087 TGAACGCTTGTGTCTGTACTGA 59.900 45.455 0.00 0.00 0.00 3.41
6055 10279 3.243737 TGAACGCTTGTGTCTGTACTGAT 60.244 43.478 5.69 0.00 0.00 2.90
6056 10280 2.677199 ACGCTTGTGTCTGTACTGATG 58.323 47.619 5.69 0.00 0.00 3.07
6057 10281 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
6058 10282 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
6146 13627 1.713078 AGGCAATTGGAAGGGTCTTCT 59.287 47.619 7.72 0.00 0.00 2.85
6171 13652 1.153628 GTGAACCCGGGATGTCGAG 60.154 63.158 32.02 0.00 0.00 4.04
6196 13994 2.277692 CGCGTGCGACTTCCGATA 60.278 61.111 8.89 0.00 42.83 2.92
6265 14063 2.210375 GCGACGCGTACGATTTCGA 61.210 57.895 27.19 0.00 43.93 3.71
6275 14073 0.442310 ACGATTTCGACCACATTGCG 59.558 50.000 7.01 0.00 43.02 4.85
6276 14074 0.442310 CGATTTCGACCACATTGCGT 59.558 50.000 0.00 0.00 43.02 5.24
6292 14090 2.874664 CGTGAAACCTCCCGGTGGA 61.875 63.158 16.44 0.00 44.73 4.02
6308 14106 3.502572 GAAGGGCGCTTCCATGTC 58.497 61.111 28.22 7.17 36.21 3.06
6311 14109 3.195698 GGGCGCTTCCATGTCGTC 61.196 66.667 7.64 0.00 36.21 4.20
6320 14118 3.243068 GCTTCCATGTCGTCAACAAGTTT 60.243 43.478 0.00 0.00 42.37 2.66
6321 14119 4.527564 CTTCCATGTCGTCAACAAGTTTC 58.472 43.478 0.00 0.00 42.37 2.78
6322 14120 2.542178 TCCATGTCGTCAACAAGTTTCG 59.458 45.455 0.00 0.00 42.37 3.46
6325 14123 4.339429 CATGTCGTCAACAAGTTTCGTTT 58.661 39.130 7.01 0.00 42.37 3.60
6329 14127 3.103007 CGTCAACAAGTTTCGTTTTCCC 58.897 45.455 0.00 0.00 0.00 3.97
6330 14128 3.181504 CGTCAACAAGTTTCGTTTTCCCT 60.182 43.478 0.00 0.00 0.00 4.20
6331 14129 4.034279 CGTCAACAAGTTTCGTTTTCCCTA 59.966 41.667 0.00 0.00 0.00 3.53
6332 14130 5.277634 CGTCAACAAGTTTCGTTTTCCCTAT 60.278 40.000 0.00 0.00 0.00 2.57
6333 14131 6.140786 GTCAACAAGTTTCGTTTTCCCTATC 58.859 40.000 0.00 0.00 0.00 2.08
6334 14132 5.049954 TCAACAAGTTTCGTTTTCCCTATCG 60.050 40.000 0.00 0.00 0.00 2.92
6335 14133 4.634199 ACAAGTTTCGTTTTCCCTATCGA 58.366 39.130 0.00 0.00 0.00 3.59
6336 14134 4.689345 ACAAGTTTCGTTTTCCCTATCGAG 59.311 41.667 0.00 0.00 33.98 4.04
6337 14135 4.532314 AGTTTCGTTTTCCCTATCGAGT 57.468 40.909 0.00 0.00 33.98 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 42 0.323360 CCCCCAACATGATCCAACGT 60.323 55.000 0.00 0.00 0.00 3.99
348 1766 9.288576 AGCAATCACTAATAAGCTTATGCAATA 57.711 29.630 19.53 7.47 42.74 1.90
491 1913 7.666623 TCCTATATGAGAATTCACGTGCATAA 58.333 34.615 11.67 0.00 35.83 1.90
560 1982 4.390909 GGGTGGAGACGTATTACTTGTTTG 59.609 45.833 0.00 0.00 0.00 2.93
561 1983 4.285260 AGGGTGGAGACGTATTACTTGTTT 59.715 41.667 0.00 0.00 0.00 2.83
562 1984 3.836562 AGGGTGGAGACGTATTACTTGTT 59.163 43.478 0.00 0.00 0.00 2.83
563 1985 3.438183 AGGGTGGAGACGTATTACTTGT 58.562 45.455 0.00 0.00 0.00 3.16
564 1986 3.181478 GGAGGGTGGAGACGTATTACTTG 60.181 52.174 0.00 0.00 0.00 3.16
565 1987 3.029570 GGAGGGTGGAGACGTATTACTT 58.970 50.000 0.00 0.00 0.00 2.24
566 1988 2.024655 TGGAGGGTGGAGACGTATTACT 60.025 50.000 0.00 0.00 0.00 2.24
567 1989 2.381911 TGGAGGGTGGAGACGTATTAC 58.618 52.381 0.00 0.00 0.00 1.89
568 1990 2.832643 TGGAGGGTGGAGACGTATTA 57.167 50.000 0.00 0.00 0.00 0.98
569 1991 1.946984 TTGGAGGGTGGAGACGTATT 58.053 50.000 0.00 0.00 0.00 1.89
570 1992 1.553704 GTTTGGAGGGTGGAGACGTAT 59.446 52.381 0.00 0.00 0.00 3.06
571 1993 0.971386 GTTTGGAGGGTGGAGACGTA 59.029 55.000 0.00 0.00 0.00 3.57
572 1994 1.752833 GTTTGGAGGGTGGAGACGT 59.247 57.895 0.00 0.00 0.00 4.34
573 1995 1.374252 CGTTTGGAGGGTGGAGACG 60.374 63.158 0.00 0.00 0.00 4.18
574 1996 0.395312 TTCGTTTGGAGGGTGGAGAC 59.605 55.000 0.00 0.00 0.00 3.36
575 1997 1.358152 ATTCGTTTGGAGGGTGGAGA 58.642 50.000 0.00 0.00 0.00 3.71
576 1998 2.084546 GAATTCGTTTGGAGGGTGGAG 58.915 52.381 0.00 0.00 0.00 3.86
577 1999 1.422024 TGAATTCGTTTGGAGGGTGGA 59.578 47.619 0.04 0.00 0.00 4.02
578 2000 1.904287 TGAATTCGTTTGGAGGGTGG 58.096 50.000 0.04 0.00 0.00 4.61
579 2001 4.485163 GATTTGAATTCGTTTGGAGGGTG 58.515 43.478 0.04 0.00 0.00 4.61
580 2002 3.509967 GGATTTGAATTCGTTTGGAGGGT 59.490 43.478 0.04 0.00 0.00 4.34
581 2003 3.119137 GGGATTTGAATTCGTTTGGAGGG 60.119 47.826 0.04 0.00 0.00 4.30
582 2004 3.509575 TGGGATTTGAATTCGTTTGGAGG 59.490 43.478 0.04 0.00 0.00 4.30
583 2005 4.782019 TGGGATTTGAATTCGTTTGGAG 57.218 40.909 0.04 0.00 0.00 3.86
584 2006 5.163405 TGTTTGGGATTTGAATTCGTTTGGA 60.163 36.000 0.04 0.00 0.00 3.53
585 2007 5.050431 GTGTTTGGGATTTGAATTCGTTTGG 60.050 40.000 0.04 0.00 0.00 3.28
586 2008 5.050431 GGTGTTTGGGATTTGAATTCGTTTG 60.050 40.000 0.04 0.00 0.00 2.93
587 2009 5.053811 GGTGTTTGGGATTTGAATTCGTTT 58.946 37.500 0.04 0.00 0.00 3.60
588 2010 4.100189 TGGTGTTTGGGATTTGAATTCGTT 59.900 37.500 0.04 0.00 0.00 3.85
589 2011 3.639094 TGGTGTTTGGGATTTGAATTCGT 59.361 39.130 0.04 0.00 0.00 3.85
590 2012 4.250116 TGGTGTTTGGGATTTGAATTCG 57.750 40.909 0.04 0.00 0.00 3.34
591 2013 4.754618 GGTTGGTGTTTGGGATTTGAATTC 59.245 41.667 0.00 0.00 0.00 2.17
592 2014 4.445592 GGGTTGGTGTTTGGGATTTGAATT 60.446 41.667 0.00 0.00 0.00 2.17
593 2015 3.072330 GGGTTGGTGTTTGGGATTTGAAT 59.928 43.478 0.00 0.00 0.00 2.57
594 2016 2.436173 GGGTTGGTGTTTGGGATTTGAA 59.564 45.455 0.00 0.00 0.00 2.69
595 2017 2.043227 GGGTTGGTGTTTGGGATTTGA 58.957 47.619 0.00 0.00 0.00 2.69
596 2018 1.071542 GGGGTTGGTGTTTGGGATTTG 59.928 52.381 0.00 0.00 0.00 2.32
597 2019 1.061735 AGGGGTTGGTGTTTGGGATTT 60.062 47.619 0.00 0.00 0.00 2.17
598 2020 0.565674 AGGGGTTGGTGTTTGGGATT 59.434 50.000 0.00 0.00 0.00 3.01
599 2021 0.114364 GAGGGGTTGGTGTTTGGGAT 59.886 55.000 0.00 0.00 0.00 3.85
600 2022 1.289982 TGAGGGGTTGGTGTTTGGGA 61.290 55.000 0.00 0.00 0.00 4.37
601 2023 0.397816 TTGAGGGGTTGGTGTTTGGG 60.398 55.000 0.00 0.00 0.00 4.12
602 2024 1.490574 TTTGAGGGGTTGGTGTTTGG 58.509 50.000 0.00 0.00 0.00 3.28
603 2025 3.530535 CTTTTTGAGGGGTTGGTGTTTG 58.469 45.455 0.00 0.00 0.00 2.93
604 2026 2.093181 GCTTTTTGAGGGGTTGGTGTTT 60.093 45.455 0.00 0.00 0.00 2.83
605 2027 1.484653 GCTTTTTGAGGGGTTGGTGTT 59.515 47.619 0.00 0.00 0.00 3.32
606 2028 1.119684 GCTTTTTGAGGGGTTGGTGT 58.880 50.000 0.00 0.00 0.00 4.16
607 2029 0.392706 GGCTTTTTGAGGGGTTGGTG 59.607 55.000 0.00 0.00 0.00 4.17
608 2030 0.264657 AGGCTTTTTGAGGGGTTGGT 59.735 50.000 0.00 0.00 0.00 3.67
609 2031 0.681175 CAGGCTTTTTGAGGGGTTGG 59.319 55.000 0.00 0.00 0.00 3.77
610 2032 1.413118 ACAGGCTTTTTGAGGGGTTG 58.587 50.000 0.00 0.00 0.00 3.77
611 2033 2.490902 CCTACAGGCTTTTTGAGGGGTT 60.491 50.000 0.00 0.00 0.00 4.11
612 2034 1.075536 CCTACAGGCTTTTTGAGGGGT 59.924 52.381 0.00 0.00 0.00 4.95
613 2035 1.354368 TCCTACAGGCTTTTTGAGGGG 59.646 52.381 0.00 0.00 34.44 4.79
614 2036 2.305927 TCTCCTACAGGCTTTTTGAGGG 59.694 50.000 0.00 0.00 34.44 4.30
615 2037 3.703001 TCTCCTACAGGCTTTTTGAGG 57.297 47.619 0.00 0.00 34.44 3.86
982 2404 3.528370 CCCCCTACTCGGTCAGCG 61.528 72.222 0.00 0.00 0.00 5.18
983 2405 1.457831 ATCCCCCTACTCGGTCAGC 60.458 63.158 0.00 0.00 0.00 4.26
984 2406 1.115930 CCATCCCCCTACTCGGTCAG 61.116 65.000 0.00 0.00 0.00 3.51
985 2407 1.075525 CCATCCCCCTACTCGGTCA 60.076 63.158 0.00 0.00 0.00 4.02
986 2408 0.828343 CTCCATCCCCCTACTCGGTC 60.828 65.000 0.00 0.00 0.00 4.79
987 2409 1.233369 CTCCATCCCCCTACTCGGT 59.767 63.158 0.00 0.00 0.00 4.69
988 2410 0.398664 AACTCCATCCCCCTACTCGG 60.399 60.000 0.00 0.00 0.00 4.63
989 2411 1.041437 GAACTCCATCCCCCTACTCG 58.959 60.000 0.00 0.00 0.00 4.18
990 2412 1.763545 GTGAACTCCATCCCCCTACTC 59.236 57.143 0.00 0.00 0.00 2.59
991 2413 1.080498 TGTGAACTCCATCCCCCTACT 59.920 52.381 0.00 0.00 0.00 2.57
992 2414 1.486726 CTGTGAACTCCATCCCCCTAC 59.513 57.143 0.00 0.00 0.00 3.18
993 2415 1.364678 TCTGTGAACTCCATCCCCCTA 59.635 52.381 0.00 0.00 0.00 3.53
994 2416 0.119155 TCTGTGAACTCCATCCCCCT 59.881 55.000 0.00 0.00 0.00 4.79
1011 2433 1.213013 CGTCTGCTTGTACGCCTCT 59.787 57.895 0.00 0.00 31.66 3.69
1076 2498 3.129502 CCACGAGGCGGTAGTCGA 61.130 66.667 0.00 0.00 42.43 4.20
1122 2544 1.676303 CCGGGTAAATGGTGGCGTT 60.676 57.895 0.00 0.00 0.00 4.84
1158 2580 0.039256 CCAGACACGCAACCCAATTG 60.039 55.000 0.00 0.00 41.69 2.32
1171 2593 2.490718 CCAAAAGGATGAACCCCAGACA 60.491 50.000 0.00 0.00 40.05 3.41
1187 2609 1.202710 TCGCCAGCAACTACTCCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
1193 2615 1.406069 CCAGATTCGCCAGCAACTACT 60.406 52.381 0.00 0.00 0.00 2.57
1275 2697 0.525455 GCGGATCGGTCAAAATTGGC 60.525 55.000 0.00 0.00 0.00 4.52
1284 2706 0.179108 AACTAAGCTGCGGATCGGTC 60.179 55.000 0.00 0.00 0.00 4.79
1286 2708 0.179111 TGAACTAAGCTGCGGATCGG 60.179 55.000 0.00 0.00 0.00 4.18
1293 2715 3.914364 CGGTCAAAATTGAACTAAGCTGC 59.086 43.478 9.33 0.00 42.66 5.25
1294 2716 5.356882 TCGGTCAAAATTGAACTAAGCTG 57.643 39.130 9.33 0.00 42.66 4.24
1295 2717 5.123979 GGATCGGTCAAAATTGAACTAAGCT 59.876 40.000 9.33 0.00 42.66 3.74
1296 2718 5.332707 GGATCGGTCAAAATTGAACTAAGC 58.667 41.667 9.33 0.92 42.66 3.09
1297 2719 5.560148 CGGATCGGTCAAAATTGAACTAAG 58.440 41.667 9.33 0.00 42.66 2.18
1298 2720 4.142773 GCGGATCGGTCAAAATTGAACTAA 60.143 41.667 9.33 0.00 42.66 2.24
1299 2721 3.372822 GCGGATCGGTCAAAATTGAACTA 59.627 43.478 9.33 0.00 42.66 2.24
1300 2722 2.161609 GCGGATCGGTCAAAATTGAACT 59.838 45.455 9.33 0.00 42.66 3.01
1301 2723 2.095466 TGCGGATCGGTCAAAATTGAAC 60.095 45.455 0.00 1.01 41.44 3.18
1302 2724 2.155279 TGCGGATCGGTCAAAATTGAA 58.845 42.857 0.00 0.00 39.21 2.69
1303 2725 1.737236 CTGCGGATCGGTCAAAATTGA 59.263 47.619 0.00 0.00 34.20 2.57
1304 2726 1.795162 GCTGCGGATCGGTCAAAATTG 60.795 52.381 0.00 0.00 0.00 2.32
1305 2727 0.451783 GCTGCGGATCGGTCAAAATT 59.548 50.000 0.00 0.00 0.00 1.82
1306 2728 0.392998 AGCTGCGGATCGGTCAAAAT 60.393 50.000 0.00 0.00 0.00 1.82
1307 2729 0.605319 AAGCTGCGGATCGGTCAAAA 60.605 50.000 0.00 0.00 0.00 2.44
1308 2730 0.248012 TAAGCTGCGGATCGGTCAAA 59.752 50.000 0.00 0.00 0.00 2.69
1309 2731 0.179111 CTAAGCTGCGGATCGGTCAA 60.179 55.000 0.00 0.00 0.00 3.18
1310 2732 1.320344 ACTAAGCTGCGGATCGGTCA 61.320 55.000 0.00 0.45 0.00 4.02
1314 2736 1.640428 TTGAACTAAGCTGCGGATCG 58.360 50.000 0.00 0.00 0.00 3.69
1378 2800 7.541437 AGTTTAGATACGACTTTGAAGTGCTAC 59.459 37.037 0.30 0.00 39.88 3.58
1507 2934 4.100529 CAAGTCAATGTTGAATCATCCGC 58.899 43.478 0.00 0.00 39.21 5.54
1508 2935 5.090757 CACAAGTCAATGTTGAATCATCCG 58.909 41.667 0.00 0.00 39.21 4.18
1529 2980 3.257393 CTGCAGATGTTGTAGGAGACAC 58.743 50.000 8.42 0.00 37.96 3.67
1548 2999 8.808529 CCTTAAATAATGTGAAGTCTCGTACTG 58.191 37.037 0.00 0.00 38.88 2.74
1585 3038 1.006086 TACGATGAAATGCACAGCCG 58.994 50.000 0.00 0.00 0.00 5.52
1593 3046 5.402568 CGGATCCAACTAGTACGATGAAATG 59.597 44.000 13.41 0.00 0.00 2.32
1594 3047 5.301045 TCGGATCCAACTAGTACGATGAAAT 59.699 40.000 13.41 0.00 0.00 2.17
1595 3048 4.641541 TCGGATCCAACTAGTACGATGAAA 59.358 41.667 13.41 0.00 0.00 2.69
1596 3049 4.201657 TCGGATCCAACTAGTACGATGAA 58.798 43.478 13.41 0.00 0.00 2.57
1597 3050 3.812262 TCGGATCCAACTAGTACGATGA 58.188 45.455 13.41 0.00 0.00 2.92
1598 3051 3.813724 TCTCGGATCCAACTAGTACGATG 59.186 47.826 13.41 0.00 0.00 3.84
1599 3052 4.082665 TCTCGGATCCAACTAGTACGAT 57.917 45.455 13.41 0.00 0.00 3.73
1600 3053 3.548745 TCTCGGATCCAACTAGTACGA 57.451 47.619 13.41 0.00 0.00 3.43
1601 3054 4.627611 TTTCTCGGATCCAACTAGTACG 57.372 45.455 13.41 0.00 0.00 3.67
1602 3055 6.255887 CACAATTTCTCGGATCCAACTAGTAC 59.744 42.308 13.41 0.00 0.00 2.73
1603 3056 6.338146 CACAATTTCTCGGATCCAACTAGTA 58.662 40.000 13.41 0.00 0.00 1.82
1604 3057 5.178797 CACAATTTCTCGGATCCAACTAGT 58.821 41.667 13.41 0.00 0.00 2.57
1605 3058 4.572389 CCACAATTTCTCGGATCCAACTAG 59.428 45.833 13.41 3.36 0.00 2.57
1606 3059 4.019681 ACCACAATTTCTCGGATCCAACTA 60.020 41.667 13.41 0.00 0.00 2.24
1607 3060 3.244911 ACCACAATTTCTCGGATCCAACT 60.245 43.478 13.41 0.00 0.00 3.16
1608 3061 3.081804 ACCACAATTTCTCGGATCCAAC 58.918 45.455 13.41 0.00 0.00 3.77
1609 3062 3.433306 ACCACAATTTCTCGGATCCAA 57.567 42.857 13.41 0.00 0.00 3.53
1610 3063 4.163268 TGATACCACAATTTCTCGGATCCA 59.837 41.667 13.41 0.00 0.00 3.41
1611 3064 4.703897 TGATACCACAATTTCTCGGATCC 58.296 43.478 0.00 0.00 0.00 3.36
1612 3065 5.817816 ACTTGATACCACAATTTCTCGGATC 59.182 40.000 0.00 0.00 0.00 3.36
1613 3066 5.586243 CACTTGATACCACAATTTCTCGGAT 59.414 40.000 0.00 0.00 0.00 4.18
1614 3067 4.935205 CACTTGATACCACAATTTCTCGGA 59.065 41.667 0.00 0.00 0.00 4.55
1615 3068 4.094887 CCACTTGATACCACAATTTCTCGG 59.905 45.833 0.00 0.00 0.00 4.63
1616 3069 4.695455 ACCACTTGATACCACAATTTCTCG 59.305 41.667 0.00 0.00 0.00 4.04
1617 3070 7.201732 CCATACCACTTGATACCACAATTTCTC 60.202 40.741 0.00 0.00 0.00 2.87
1618 3071 6.603201 CCATACCACTTGATACCACAATTTCT 59.397 38.462 0.00 0.00 0.00 2.52
1619 3072 6.183360 CCCATACCACTTGATACCACAATTTC 60.183 42.308 0.00 0.00 0.00 2.17
1620 3073 5.656416 CCCATACCACTTGATACCACAATTT 59.344 40.000 0.00 0.00 0.00 1.82
1621 3074 5.044476 TCCCATACCACTTGATACCACAATT 60.044 40.000 0.00 0.00 0.00 2.32
1622 3075 4.476846 TCCCATACCACTTGATACCACAAT 59.523 41.667 0.00 0.00 0.00 2.71
1623 3076 3.847184 TCCCATACCACTTGATACCACAA 59.153 43.478 0.00 0.00 0.00 3.33
1624 3077 3.454447 CTCCCATACCACTTGATACCACA 59.546 47.826 0.00 0.00 0.00 4.17
1625 3078 3.454812 ACTCCCATACCACTTGATACCAC 59.545 47.826 0.00 0.00 0.00 4.16
1626 3079 3.454447 CACTCCCATACCACTTGATACCA 59.546 47.826 0.00 0.00 0.00 3.25
1627 3080 3.181454 CCACTCCCATACCACTTGATACC 60.181 52.174 0.00 0.00 0.00 2.73
1628 3081 3.709653 TCCACTCCCATACCACTTGATAC 59.290 47.826 0.00 0.00 0.00 2.24
1629 3082 4.002256 TCCACTCCCATACCACTTGATA 57.998 45.455 0.00 0.00 0.00 2.15
1630 3083 2.845659 TCCACTCCCATACCACTTGAT 58.154 47.619 0.00 0.00 0.00 2.57
1631 3084 2.335681 TCCACTCCCATACCACTTGA 57.664 50.000 0.00 0.00 0.00 3.02
1632 3085 4.771114 TTATCCACTCCCATACCACTTG 57.229 45.455 0.00 0.00 0.00 3.16
1633 3086 5.011738 CGTATTATCCACTCCCATACCACTT 59.988 44.000 0.00 0.00 0.00 3.16
1676 3150 4.141620 CCAGATGCACCTATCTAAACCTGT 60.142 45.833 0.00 0.00 35.70 4.00
1688 3162 2.267006 CGCAGACCAGATGCACCT 59.733 61.111 0.00 0.00 44.05 4.00
1705 3179 7.432350 AATACAGCAGCTAGAATTCATAAGC 57.568 36.000 15.72 15.72 35.16 3.09
1737 3211 8.755696 TGATAACACAAATAAAAAGGTGCATC 57.244 30.769 0.00 0.00 34.69 3.91
1788 3262 9.569122 GGGTACACAATACATTAGACCAATAAT 57.431 33.333 0.00 0.00 0.00 1.28
1789 3263 8.774183 AGGGTACACAATACATTAGACCAATAA 58.226 33.333 0.00 0.00 0.00 1.40
1790 3264 8.326765 AGGGTACACAATACATTAGACCAATA 57.673 34.615 0.00 0.00 0.00 1.90
1791 3265 7.127339 AGAGGGTACACAATACATTAGACCAAT 59.873 37.037 0.00 0.00 0.00 3.16
1792 3266 6.442564 AGAGGGTACACAATACATTAGACCAA 59.557 38.462 0.00 0.00 0.00 3.67
1793 3267 5.962031 AGAGGGTACACAATACATTAGACCA 59.038 40.000 0.00 0.00 0.00 4.02
1794 3268 6.481434 AGAGGGTACACAATACATTAGACC 57.519 41.667 0.00 0.00 0.00 3.85
1795 3269 8.461249 TCTAGAGGGTACACAATACATTAGAC 57.539 38.462 0.00 0.00 0.00 2.59
1796 3270 9.656323 AATCTAGAGGGTACACAATACATTAGA 57.344 33.333 0.00 0.00 0.00 2.10
2115 3756 2.156310 GCACAAGCAAGTTAAAGCATGC 59.844 45.455 10.51 10.51 41.58 4.06
2417 4058 0.178981 AAACACCTCTGGCTGCATGT 60.179 50.000 0.50 0.00 0.00 3.21
2444 4085 1.203287 GCAGCAAACTTCCCATCCTTC 59.797 52.381 0.00 0.00 0.00 3.46
2541 4182 4.583073 TGCTAAGTCTAGTGTGTCAACAGA 59.417 41.667 0.00 0.00 36.84 3.41
2631 4272 5.474578 AGTTTCTGAAGAGATAGCACACA 57.525 39.130 0.00 0.00 0.00 3.72
2632 4273 5.350091 GGAAGTTTCTGAAGAGATAGCACAC 59.650 44.000 0.00 0.00 0.00 3.82
2766 4407 7.493743 AGATCATGAGATGCTGTAAATGAAC 57.506 36.000 0.09 0.00 33.72 3.18
2988 4629 8.846943 TTAAACATATAGGTACATGGCATGAG 57.153 34.615 32.74 8.96 0.00 2.90
3033 4674 1.201414 GTAACCCAGCGTTCCAATTGG 59.799 52.381 19.08 19.08 35.79 3.16
3044 4685 3.991999 GGGAAACCGTAACCCAGC 58.008 61.111 0.00 0.00 43.64 4.85
3140 4781 6.824305 AGAGTTGAATACAAGATTGGTTGG 57.176 37.500 0.00 0.00 36.64 3.77
3710 5382 6.469782 ACATAGGGAAACAAGCAATAATGG 57.530 37.500 0.00 0.00 0.00 3.16
3774 5446 4.640771 TTCAGTTGATAAGGGAACTGCT 57.359 40.909 0.00 0.00 45.80 4.24
3937 5612 4.714851 ACGTATCACATTAAACGCCAAAC 58.285 39.130 0.00 0.00 38.87 2.93
3944 5619 8.186178 ACATCTTCAGACGTATCACATTAAAC 57.814 34.615 0.00 0.00 0.00 2.01
4022 5824 3.297736 GTGACCCACACTATAGGCTACT 58.702 50.000 4.43 0.00 45.13 2.57
4023 5825 3.729862 GTGACCCACACTATAGGCTAC 57.270 52.381 4.43 0.00 45.13 3.58
4113 5916 5.466819 TGTATTCTCTACACCAAGTCAACG 58.533 41.667 0.00 0.00 0.00 4.10
4231 6034 3.695830 ACGTAGTGTCCACAAATCCAT 57.304 42.857 0.00 0.00 42.51 3.41
4233 6036 3.676646 GTGTACGTAGTGTCCACAAATCC 59.323 47.826 0.00 0.00 45.73 3.01
4244 6047 5.637809 TCTTGAGCTATTGTGTACGTAGTG 58.362 41.667 0.00 0.00 45.73 2.74
4249 6052 6.530181 TGTATGTTCTTGAGCTATTGTGTACG 59.470 38.462 0.00 0.00 0.00 3.67
4488 6291 7.175119 GGAGTAGGAAAAGACAAGTAAAAGCAT 59.825 37.037 0.00 0.00 0.00 3.79
4561 6364 7.336931 GGACTGTTGGTAAGTGTTATTCATCAT 59.663 37.037 0.00 0.00 0.00 2.45
4623 6426 4.653341 GCTCTATATATGGATGGAGGCAGT 59.347 45.833 0.00 0.00 35.54 4.40
4624 6427 4.261952 CGCTCTATATATGGATGGAGGCAG 60.262 50.000 0.00 0.00 35.54 4.85
4625 6428 3.638627 CGCTCTATATATGGATGGAGGCA 59.361 47.826 0.00 0.00 35.54 4.75
4626 6429 3.553922 GCGCTCTATATATGGATGGAGGC 60.554 52.174 0.00 0.00 35.54 4.70
4627 6430 3.006323 GGCGCTCTATATATGGATGGAGG 59.994 52.174 7.64 0.00 35.54 4.30
4628 6431 3.894427 AGGCGCTCTATATATGGATGGAG 59.106 47.826 7.64 0.00 37.46 3.86
4629 6432 3.916035 AGGCGCTCTATATATGGATGGA 58.084 45.455 7.64 0.00 0.00 3.41
4630 6433 5.791336 TTAGGCGCTCTATATATGGATGG 57.209 43.478 7.64 0.00 0.00 3.51
4631 6434 5.636965 GCATTAGGCGCTCTATATATGGATG 59.363 44.000 7.64 7.14 0.00 3.51
4632 6435 5.788450 GCATTAGGCGCTCTATATATGGAT 58.212 41.667 7.64 0.00 0.00 3.41
4633 6436 5.201713 GCATTAGGCGCTCTATATATGGA 57.798 43.478 7.64 0.00 0.00 3.41
4647 6450 3.675467 ATCTCGAAAAACGCATTAGGC 57.325 42.857 0.00 0.00 42.26 3.93
4648 6451 3.786048 GCAATCTCGAAAAACGCATTAGG 59.214 43.478 0.00 0.00 42.26 2.69
4649 6452 3.786048 GGCAATCTCGAAAAACGCATTAG 59.214 43.478 0.00 0.00 42.26 1.73
4650 6453 3.438781 AGGCAATCTCGAAAAACGCATTA 59.561 39.130 0.00 0.00 42.26 1.90
4651 6454 2.228822 AGGCAATCTCGAAAAACGCATT 59.771 40.909 0.00 0.00 42.26 3.56
4652 6455 1.812571 AGGCAATCTCGAAAAACGCAT 59.187 42.857 0.00 0.00 42.26 4.73
4653 6456 1.234821 AGGCAATCTCGAAAAACGCA 58.765 45.000 0.00 0.00 42.26 5.24
4654 6457 2.331809 AAGGCAATCTCGAAAAACGC 57.668 45.000 0.00 0.00 42.26 4.84
4655 6458 3.664025 GTCAAAGGCAATCTCGAAAAACG 59.336 43.478 0.00 0.00 44.09 3.60
4656 6459 4.860072 AGTCAAAGGCAATCTCGAAAAAC 58.140 39.130 0.00 0.00 0.00 2.43
4657 6460 4.821805 AGAGTCAAAGGCAATCTCGAAAAA 59.178 37.500 0.00 0.00 0.00 1.94
4658 6461 4.389374 AGAGTCAAAGGCAATCTCGAAAA 58.611 39.130 0.00 0.00 0.00 2.29
4659 6462 4.008074 AGAGTCAAAGGCAATCTCGAAA 57.992 40.909 0.00 0.00 0.00 3.46
4660 6463 3.685139 AGAGTCAAAGGCAATCTCGAA 57.315 42.857 0.00 0.00 0.00 3.71
4661 6464 3.006859 TCAAGAGTCAAAGGCAATCTCGA 59.993 43.478 0.00 0.00 0.00 4.04
4662 6465 3.329386 TCAAGAGTCAAAGGCAATCTCG 58.671 45.455 0.00 0.00 0.00 4.04
4663 6466 4.940046 TCATCAAGAGTCAAAGGCAATCTC 59.060 41.667 0.00 0.00 0.00 2.75
4664 6467 4.699257 GTCATCAAGAGTCAAAGGCAATCT 59.301 41.667 0.00 0.00 0.00 2.40
4665 6468 4.456911 TGTCATCAAGAGTCAAAGGCAATC 59.543 41.667 0.00 0.00 0.00 2.67
4666 6469 4.401022 TGTCATCAAGAGTCAAAGGCAAT 58.599 39.130 0.00 0.00 0.00 3.56
4667 6470 3.819368 TGTCATCAAGAGTCAAAGGCAA 58.181 40.909 0.00 0.00 0.00 4.52
4668 6471 3.490439 TGTCATCAAGAGTCAAAGGCA 57.510 42.857 0.00 0.00 0.00 4.75
4669 6472 6.500684 TTAATGTCATCAAGAGTCAAAGGC 57.499 37.500 0.00 0.00 0.00 4.35
4670 6473 9.388506 ACTATTAATGTCATCAAGAGTCAAAGG 57.611 33.333 0.00 0.00 0.00 3.11
4734 6537 6.416750 CCGTCAAATTTGTACTTGAAAGGAAC 59.583 38.462 17.47 3.35 35.37 3.62
4735 6538 6.095720 ACCGTCAAATTTGTACTTGAAAGGAA 59.904 34.615 17.47 0.00 36.18 3.36
4736 6539 5.591067 ACCGTCAAATTTGTACTTGAAAGGA 59.409 36.000 17.47 0.00 36.18 3.36
4737 6540 5.827666 ACCGTCAAATTTGTACTTGAAAGG 58.172 37.500 17.47 10.37 37.50 3.11
4738 6541 7.060633 GCATACCGTCAAATTTGTACTTGAAAG 59.939 37.037 17.47 0.00 33.52 2.62
4739 6542 6.858993 GCATACCGTCAAATTTGTACTTGAAA 59.141 34.615 17.47 0.00 33.52 2.69
4740 6543 6.205853 AGCATACCGTCAAATTTGTACTTGAA 59.794 34.615 17.47 0.00 33.52 2.69
4741 6544 5.703592 AGCATACCGTCAAATTTGTACTTGA 59.296 36.000 17.47 0.00 0.00 3.02
4742 6545 5.938322 AGCATACCGTCAAATTTGTACTTG 58.062 37.500 17.47 10.09 0.00 3.16
4743 6546 6.569179 AAGCATACCGTCAAATTTGTACTT 57.431 33.333 17.47 8.04 0.00 2.24
4744 6547 6.016610 ACAAAGCATACCGTCAAATTTGTACT 60.017 34.615 17.47 2.55 37.56 2.73
4745 6548 6.087555 CACAAAGCATACCGTCAAATTTGTAC 59.912 38.462 17.47 12.81 37.31 2.90
4746 6549 6.146216 CACAAAGCATACCGTCAAATTTGTA 58.854 36.000 17.47 3.59 37.31 2.41
4747 6550 4.981674 CACAAAGCATACCGTCAAATTTGT 59.018 37.500 17.47 1.31 39.30 2.83
4748 6551 4.981674 ACACAAAGCATACCGTCAAATTTG 59.018 37.500 12.15 12.15 33.53 2.32
4749 6552 5.195001 ACACAAAGCATACCGTCAAATTT 57.805 34.783 0.00 0.00 0.00 1.82
4750 6553 4.846779 ACACAAAGCATACCGTCAAATT 57.153 36.364 0.00 0.00 0.00 1.82
4751 6554 5.472137 AGTTACACAAAGCATACCGTCAAAT 59.528 36.000 0.00 0.00 0.00 2.32
4752 6555 4.817464 AGTTACACAAAGCATACCGTCAAA 59.183 37.500 0.00 0.00 0.00 2.69
4753 6556 4.382291 AGTTACACAAAGCATACCGTCAA 58.618 39.130 0.00 0.00 0.00 3.18
4754 6557 3.997762 AGTTACACAAAGCATACCGTCA 58.002 40.909 0.00 0.00 0.00 4.35
4755 6558 4.708601 CAAGTTACACAAAGCATACCGTC 58.291 43.478 0.00 0.00 0.00 4.79
4756 6559 3.058501 GCAAGTTACACAAAGCATACCGT 60.059 43.478 0.00 0.00 0.00 4.83
4757 6560 3.058570 TGCAAGTTACACAAAGCATACCG 60.059 43.478 0.00 0.00 0.00 4.02
4758 6561 4.497473 TGCAAGTTACACAAAGCATACC 57.503 40.909 0.00 0.00 0.00 2.73
4759 6562 5.460646 ACATGCAAGTTACACAAAGCATAC 58.539 37.500 0.00 0.00 40.38 2.39
4760 6563 5.240403 TGACATGCAAGTTACACAAAGCATA 59.760 36.000 0.00 0.00 40.38 3.14
4761 6564 4.037803 TGACATGCAAGTTACACAAAGCAT 59.962 37.500 0.00 0.00 42.82 3.79
4762 6565 3.379688 TGACATGCAAGTTACACAAAGCA 59.620 39.130 0.00 0.00 36.34 3.91
4763 6566 3.963665 TGACATGCAAGTTACACAAAGC 58.036 40.909 0.00 0.00 0.00 3.51
4765 6568 9.786105 CAATATATGACATGCAAGTTACACAAA 57.214 29.630 0.00 0.00 0.00 2.83
4766 6569 8.955388 ACAATATATGACATGCAAGTTACACAA 58.045 29.630 0.00 0.00 0.00 3.33
4767 6570 8.504812 ACAATATATGACATGCAAGTTACACA 57.495 30.769 0.00 0.00 0.00 3.72
4768 6571 9.225201 CAACAATATATGACATGCAAGTTACAC 57.775 33.333 0.00 0.00 0.00 2.90
4769 6572 7.914871 GCAACAATATATGACATGCAAGTTACA 59.085 33.333 0.00 0.00 36.96 2.41
4770 6573 8.131100 AGCAACAATATATGACATGCAAGTTAC 58.869 33.333 0.00 0.00 38.32 2.50
4771 6574 8.224389 AGCAACAATATATGACATGCAAGTTA 57.776 30.769 0.00 0.00 38.32 2.24
4772 6575 7.067859 AGAGCAACAATATATGACATGCAAGTT 59.932 33.333 0.00 0.00 38.32 2.66
4773 6576 6.544931 AGAGCAACAATATATGACATGCAAGT 59.455 34.615 0.00 0.00 38.32 3.16
4774 6577 6.967135 AGAGCAACAATATATGACATGCAAG 58.033 36.000 12.66 0.00 38.32 4.01
4775 6578 6.947644 AGAGCAACAATATATGACATGCAA 57.052 33.333 12.66 0.00 38.32 4.08
4776 6579 7.498570 TGTTAGAGCAACAATATATGACATGCA 59.501 33.333 12.66 0.00 44.20 3.96
4777 6580 7.864686 TGTTAGAGCAACAATATATGACATGC 58.135 34.615 0.00 5.40 44.20 4.06
4791 6594 4.275936 ACTTTGACCACATGTTAGAGCAAC 59.724 41.667 0.00 0.00 37.67 4.17
4792 6595 4.460263 ACTTTGACCACATGTTAGAGCAA 58.540 39.130 0.00 0.00 0.00 3.91
4793 6596 4.085357 ACTTTGACCACATGTTAGAGCA 57.915 40.909 0.00 0.00 0.00 4.26
4794 6597 5.390991 GCTAACTTTGACCACATGTTAGAGC 60.391 44.000 13.27 0.68 40.91 4.09
4795 6598 5.122396 GGCTAACTTTGACCACATGTTAGAG 59.878 44.000 13.27 0.00 40.91 2.43
4796 6599 5.001232 GGCTAACTTTGACCACATGTTAGA 58.999 41.667 13.27 0.00 40.91 2.10
4797 6600 5.003804 AGGCTAACTTTGACCACATGTTAG 58.996 41.667 0.00 0.00 41.10 2.34
4798 6601 4.980573 AGGCTAACTTTGACCACATGTTA 58.019 39.130 0.00 0.00 0.00 2.41
4799 6602 3.832527 AGGCTAACTTTGACCACATGTT 58.167 40.909 0.00 0.00 0.00 2.71
4800 6603 3.508845 AGGCTAACTTTGACCACATGT 57.491 42.857 0.00 0.00 0.00 3.21
4801 6604 3.820467 TCAAGGCTAACTTTGACCACATG 59.180 43.478 0.00 0.00 37.29 3.21
4802 6605 4.098914 TCAAGGCTAACTTTGACCACAT 57.901 40.909 0.00 0.00 37.29 3.21
4803 6606 3.569194 TCAAGGCTAACTTTGACCACA 57.431 42.857 0.00 0.00 37.29 4.17
4804 6607 4.911514 TTTCAAGGCTAACTTTGACCAC 57.088 40.909 0.00 0.00 37.29 4.16
4805 6608 5.186021 TGTTTTTCAAGGCTAACTTTGACCA 59.814 36.000 0.00 0.00 37.29 4.02
4806 6609 5.518847 GTGTTTTTCAAGGCTAACTTTGACC 59.481 40.000 0.00 0.00 37.29 4.02
4807 6610 6.096695 TGTGTTTTTCAAGGCTAACTTTGAC 58.903 36.000 0.00 0.00 37.29 3.18
4808 6611 6.274157 TGTGTTTTTCAAGGCTAACTTTGA 57.726 33.333 0.00 0.00 37.29 2.69
4809 6612 7.538303 AATGTGTTTTTCAAGGCTAACTTTG 57.462 32.000 0.00 0.00 37.29 2.77
4810 6613 7.926018 CCTAATGTGTTTTTCAAGGCTAACTTT 59.074 33.333 0.00 0.00 37.29 2.66
4811 6614 7.433680 CCTAATGTGTTTTTCAAGGCTAACTT 58.566 34.615 0.00 0.00 41.00 2.66
4812 6615 6.516693 GCCTAATGTGTTTTTCAAGGCTAACT 60.517 38.462 3.26 0.00 40.93 2.24
4813 6616 5.633601 GCCTAATGTGTTTTTCAAGGCTAAC 59.366 40.000 3.26 0.00 40.93 2.34
4814 6617 5.279256 GGCCTAATGTGTTTTTCAAGGCTAA 60.279 40.000 10.03 0.00 42.65 3.09
4815 6618 4.219725 GGCCTAATGTGTTTTTCAAGGCTA 59.780 41.667 10.03 0.00 42.65 3.93
4816 6619 3.006859 GGCCTAATGTGTTTTTCAAGGCT 59.993 43.478 10.03 0.00 42.65 4.58
4817 6620 3.325870 GGCCTAATGTGTTTTTCAAGGC 58.674 45.455 0.00 1.82 42.45 4.35
4818 6621 3.578282 AGGGCCTAATGTGTTTTTCAAGG 59.422 43.478 2.82 0.00 0.00 3.61
4819 6622 4.871933 AGGGCCTAATGTGTTTTTCAAG 57.128 40.909 2.82 0.00 0.00 3.02
4820 6623 9.875708 ATATATAGGGCCTAATGTGTTTTTCAA 57.124 29.630 18.91 0.00 0.00 2.69
4824 6627 9.920946 CCATATATATAGGGCCTAATGTGTTTT 57.079 33.333 18.91 0.30 0.00 2.43
4825 6628 9.291516 TCCATATATATAGGGCCTAATGTGTTT 57.708 33.333 18.91 1.12 34.36 2.83
4826 6629 8.869986 TCCATATATATAGGGCCTAATGTGTT 57.130 34.615 18.91 1.94 34.36 3.32
4832 6635 8.633724 CCCTCTATCCATATATATAGGGCCTAA 58.366 40.741 18.91 7.61 38.39 2.69
4833 6636 7.979410 TCCCTCTATCCATATATATAGGGCCTA 59.021 40.741 17.16 17.16 42.02 3.93
4834 6637 6.810442 TCCCTCTATCCATATATATAGGGCCT 59.190 42.308 17.00 12.58 42.02 5.19
4835 6638 7.057732 TCCCTCTATCCATATATATAGGGCC 57.942 44.000 17.00 0.00 42.02 5.80
4836 6639 7.714500 ACTCCCTCTATCCATATATATAGGGC 58.286 42.308 17.00 0.00 42.02 5.19
4838 6641 9.914834 GCTACTCCCTCTATCCATATATATAGG 57.085 40.741 0.00 0.00 0.00 2.57
4841 6644 9.188562 TCTGCTACTCCCTCTATCCATATATAT 57.811 37.037 0.00 0.00 0.00 0.86
4842 6645 8.582891 TCTGCTACTCCCTCTATCCATATATA 57.417 38.462 0.00 0.00 0.00 0.86
4843 6646 7.473041 TCTGCTACTCCCTCTATCCATATAT 57.527 40.000 0.00 0.00 0.00 0.86
4844 6647 6.910259 TCTGCTACTCCCTCTATCCATATA 57.090 41.667 0.00 0.00 0.00 0.86
4845 6648 5.805208 TCTGCTACTCCCTCTATCCATAT 57.195 43.478 0.00 0.00 0.00 1.78
4846 6649 5.600669 TTCTGCTACTCCCTCTATCCATA 57.399 43.478 0.00 0.00 0.00 2.74
4847 6650 4.477536 TTCTGCTACTCCCTCTATCCAT 57.522 45.455 0.00 0.00 0.00 3.41
4848 6651 3.973472 TTCTGCTACTCCCTCTATCCA 57.027 47.619 0.00 0.00 0.00 3.41
4849 6652 5.816955 ATTTTCTGCTACTCCCTCTATCC 57.183 43.478 0.00 0.00 0.00 2.59
4850 6653 6.587273 ACAATTTTCTGCTACTCCCTCTATC 58.413 40.000 0.00 0.00 0.00 2.08
4851 6654 6.567602 ACAATTTTCTGCTACTCCCTCTAT 57.432 37.500 0.00 0.00 0.00 1.98
4852 6655 6.013725 TCAACAATTTTCTGCTACTCCCTCTA 60.014 38.462 0.00 0.00 0.00 2.43
4853 6656 4.917906 ACAATTTTCTGCTACTCCCTCT 57.082 40.909 0.00 0.00 0.00 3.69
4854 6657 5.003804 TCAACAATTTTCTGCTACTCCCTC 58.996 41.667 0.00 0.00 0.00 4.30
4855 6658 4.985538 TCAACAATTTTCTGCTACTCCCT 58.014 39.130 0.00 0.00 0.00 4.20
4856 6659 5.473504 TCTTCAACAATTTTCTGCTACTCCC 59.526 40.000 0.00 0.00 0.00 4.30
4857 6660 6.560253 TCTTCAACAATTTTCTGCTACTCC 57.440 37.500 0.00 0.00 0.00 3.85
4858 6661 8.292448 TGATTCTTCAACAATTTTCTGCTACTC 58.708 33.333 0.00 0.00 0.00 2.59
4859 6662 8.169977 TGATTCTTCAACAATTTTCTGCTACT 57.830 30.769 0.00 0.00 0.00 2.57
4860 6663 8.078596 ACTGATTCTTCAACAATTTTCTGCTAC 58.921 33.333 0.00 0.00 0.00 3.58
4861 6664 8.077991 CACTGATTCTTCAACAATTTTCTGCTA 58.922 33.333 0.00 0.00 0.00 3.49
4902 6705 3.679639 GCAATCTTAGCAATGGGGGTTTG 60.680 47.826 0.00 0.00 0.00 2.93
5061 6864 4.512944 CAGATGTCCCATATCCAAAGAACG 59.487 45.833 0.00 0.00 0.00 3.95
5262 7065 2.549332 GCTTCCTGCTGAGTTCCAC 58.451 57.895 0.00 0.00 38.95 4.02
5328 7131 0.248843 CTTCCTCTGGCAGAGTGGAC 59.751 60.000 35.40 0.00 42.85 4.02
5332 7135 0.980423 GGTTCTTCCTCTGGCAGAGT 59.020 55.000 35.40 0.00 40.72 3.24
5510 7313 4.406943 GAAGAAACAATCATCTTCCGTGC 58.593 43.478 4.56 0.00 43.64 5.34
5600 7403 0.833949 GGACAGACCAGAATCCTCCC 59.166 60.000 0.00 0.00 38.79 4.30
5655 7458 1.311859 TCTGGCTCACAAACTGCTTG 58.688 50.000 0.00 0.00 41.19 4.01
5775 7582 2.293399 CAGCTGGACAAAGTTAACCACC 59.707 50.000 5.57 0.09 0.00 4.61
5780 7587 5.129634 TCATTGACAGCTGGACAAAGTTAA 58.870 37.500 24.47 5.53 0.00 2.01
5792 7599 2.905415 TCCCCATTTCATTGACAGCT 57.095 45.000 0.00 0.00 0.00 4.24
5798 7605 8.071177 AGAAAGATAACTTCCCCATTTCATTG 57.929 34.615 0.00 0.00 35.05 2.82
5829 7636 1.421382 TCGCACGTTGCTAGTTTACC 58.579 50.000 8.07 0.00 42.25 2.85
5841 7648 2.177580 CACAGGTTGGTTCGCACGT 61.178 57.895 0.00 0.00 0.00 4.49
5855 7662 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
5864 7671 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
5869 7676 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
5920 10144 8.768019 CATCTTGAGATTTACGAGAATAATGCA 58.232 33.333 0.00 0.00 32.49 3.96
5926 10150 9.149225 GCATATCATCTTGAGATTTACGAGAAT 57.851 33.333 0.00 0.00 32.49 2.40
5927 10151 7.600375 GGCATATCATCTTGAGATTTACGAGAA 59.400 37.037 0.00 0.00 32.49 2.87
5929 10153 6.034363 CGGCATATCATCTTGAGATTTACGAG 59.966 42.308 0.00 0.00 31.21 4.18
5932 10156 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
5933 10157 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
5936 10160 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
5938 10162 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
5939 10163 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
5940 10164 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
5941 10165 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
5942 10166 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
5943 10167 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
5954 10178 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
5964 10188 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
5967 10191 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
5993 10217 1.834896 ACCCCTATGAACGCATACACA 59.165 47.619 0.00 0.00 35.94 3.72
5998 10222 1.134401 CACTCACCCCTATGAACGCAT 60.134 52.381 0.00 0.00 38.54 4.73
6036 10260 2.677199 CATCAGTACAGACACAAGCGT 58.323 47.619 0.00 0.00 0.00 5.07
6069 10293 1.391485 GTCTGCACGTCATGTTGCTAG 59.609 52.381 14.74 11.25 0.00 3.42
6071 10295 0.250038 AGTCTGCACGTCATGTTGCT 60.250 50.000 14.74 0.00 0.00 3.91
6072 10296 0.110509 CAGTCTGCACGTCATGTTGC 60.111 55.000 9.02 9.02 0.00 4.17
6075 10299 0.966179 TACCAGTCTGCACGTCATGT 59.034 50.000 0.00 0.00 0.00 3.21
6076 10300 1.067565 ACTACCAGTCTGCACGTCATG 60.068 52.381 0.00 0.00 0.00 3.07
6077 10301 1.067565 CACTACCAGTCTGCACGTCAT 60.068 52.381 0.00 0.00 0.00 3.06
6078 10302 0.313987 CACTACCAGTCTGCACGTCA 59.686 55.000 0.00 0.00 0.00 4.35
6131 13612 2.420687 GCGATGAGAAGACCCTTCCAAT 60.421 50.000 3.33 0.00 0.00 3.16
6192 13990 2.495084 TCCTCCGATCAGTGTCTATCG 58.505 52.381 5.87 5.87 43.53 2.92
6193 13991 4.331968 AGATCCTCCGATCAGTGTCTATC 58.668 47.826 3.15 0.00 46.42 2.08
6194 13992 4.380843 AGATCCTCCGATCAGTGTCTAT 57.619 45.455 3.15 0.00 46.42 1.98
6196 13994 2.746279 AGATCCTCCGATCAGTGTCT 57.254 50.000 3.15 0.00 46.42 3.41
6254 14052 2.534150 CGCAATGTGGTCGAAATCGTAC 60.534 50.000 2.41 2.43 40.80 3.67
6257 14055 0.442310 ACGCAATGTGGTCGAAATCG 59.558 50.000 0.00 0.00 41.45 3.34
6292 14090 2.436646 CGACATGGAAGCGCCCTT 60.437 61.111 2.29 0.00 34.97 3.95
6297 14095 0.865111 TTGTTGACGACATGGAAGCG 59.135 50.000 0.00 0.00 38.26 4.68
6308 14106 3.103007 GGGAAAACGAAACTTGTTGACG 58.897 45.455 0.00 10.11 0.00 4.35
6311 14109 5.049954 TCGATAGGGAAAACGAAACTTGTTG 60.050 40.000 0.00 0.00 0.00 3.33
6333 14131 4.903638 TTTTTCACAGCTCGATAACTCG 57.096 40.909 0.00 0.00 46.41 4.18
6357 14155 8.964420 TTGTTGCTTCGATTTTCCTTTATAAG 57.036 30.769 0.00 0.00 0.00 1.73
6362 14160 7.552458 AATTTTGTTGCTTCGATTTTCCTTT 57.448 28.000 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.