Multiple sequence alignment - TraesCS1B01G229000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G229000 chr1B 100.000 4006 0 0 1 4006 411156979 411152974 0.000000e+00 7398.0
1 TraesCS1B01G229000 chr1B 74.757 618 116 34 2278 2872 288757736 288758336 1.440000e-59 241.0
2 TraesCS1B01G229000 chr1B 83.962 106 15 2 99 203 306062079 306061975 2.550000e-17 100.0
3 TraesCS1B01G229000 chr1D 95.751 1671 52 9 1554 3211 303517637 303515973 0.000000e+00 2675.0
4 TraesCS1B01G229000 chr1D 91.817 1332 61 17 241 1553 303519071 303517769 0.000000e+00 1812.0
5 TraesCS1B01G229000 chr1D 87.189 281 31 3 3727 4006 303515751 303515475 8.360000e-82 315.0
6 TraesCS1B01G229000 chr1D 79.111 225 33 9 3474 3686 303515967 303515745 4.170000e-30 143.0
7 TraesCS1B01G229000 chr1D 83.810 105 17 0 99 203 491667379 491667275 2.550000e-17 100.0
8 TraesCS1B01G229000 chr1A 95.033 1671 56 11 1554 3211 381097806 381096150 0.000000e+00 2601.0
9 TraesCS1B01G229000 chr1A 89.719 1245 72 33 334 1553 381099107 381097894 0.000000e+00 1539.0
10 TraesCS1B01G229000 chr1A 83.060 549 68 11 3474 3999 381096144 381095598 3.620000e-130 475.0
11 TraesCS1B01G229000 chr1A 75.000 604 115 31 2278 2860 254351398 254351986 3.090000e-61 246.0
12 TraesCS1B01G229000 chr7D 89.961 259 17 4 3221 3478 620719382 620719632 3.860000e-85 326.0
13 TraesCS1B01G229000 chr7D 75.155 161 33 2 1061 1221 618864823 618864976 7.180000e-08 69.4
14 TraesCS1B01G229000 chr6B 88.302 265 24 2 3206 3470 347227138 347227395 1.080000e-80 311.0
15 TraesCS1B01G229000 chr4A 88.060 268 24 3 3216 3482 615435279 615435019 1.080000e-80 311.0
16 TraesCS1B01G229000 chr4D 88.506 261 23 3 3210 3470 15448787 15448534 3.890000e-80 309.0
17 TraesCS1B01G229000 chr3B 88.462 260 23 2 3216 3475 555933953 555933701 1.400000e-79 307.0
18 TraesCS1B01G229000 chr3B 84.848 99 11 3 3600 3697 824279859 824279764 3.300000e-16 97.1
19 TraesCS1B01G229000 chr3A 87.879 264 24 3 3219 3481 309063558 309063814 1.810000e-78 303.0
20 TraesCS1B01G229000 chr7A 88.077 260 24 2 3211 3470 493632687 493632939 6.510000e-78 302.0
21 TraesCS1B01G229000 chr7A 78.144 334 57 8 2541 2861 718489527 718489857 8.780000e-47 198.0
22 TraesCS1B01G229000 chr7A 85.714 105 15 0 99 203 674073780 674073884 1.180000e-20 111.0
23 TraesCS1B01G229000 chr7A 83.810 105 17 0 99 203 456258601 456258705 2.550000e-17 100.0
24 TraesCS1B01G229000 chr7A 83.036 112 18 1 99 210 712710772 712710662 2.550000e-17 100.0
25 TraesCS1B01G229000 chr5D 86.159 289 26 8 3195 3479 123450219 123450497 2.340000e-77 300.0
26 TraesCS1B01G229000 chr3D 86.219 283 24 9 3205 3481 200267748 200267475 3.920000e-75 292.0
27 TraesCS1B01G229000 chr7B 83.810 105 17 0 99 203 113910842 113910738 2.550000e-17 100.0
28 TraesCS1B01G229000 chr6A 83.810 105 17 0 99 203 121662636 121662532 2.550000e-17 100.0
29 TraesCS1B01G229000 chr5A 83.810 105 17 0 99 203 52420585 52420689 2.550000e-17 100.0
30 TraesCS1B01G229000 chr2D 83.810 105 17 0 99 203 17009159 17009055 2.550000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G229000 chr1B 411152974 411156979 4005 True 7398.000000 7398 100.000000 1 4006 1 chr1B.!!$R2 4005
1 TraesCS1B01G229000 chr1B 288757736 288758336 600 False 241.000000 241 74.757000 2278 2872 1 chr1B.!!$F1 594
2 TraesCS1B01G229000 chr1D 303515475 303519071 3596 True 1236.250000 2675 88.467000 241 4006 4 chr1D.!!$R2 3765
3 TraesCS1B01G229000 chr1A 381095598 381099107 3509 True 1538.333333 2601 89.270667 334 3999 3 chr1A.!!$R1 3665
4 TraesCS1B01G229000 chr1A 254351398 254351986 588 False 246.000000 246 75.000000 2278 2860 1 chr1A.!!$F1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.104487 TGACAAGGCGTTTACGGTGA 59.896 50.0 4.29 0.00 40.23 4.02 F
132 133 0.105408 ACAAGGCGTTTACGGTGACT 59.895 50.0 4.29 0.00 40.23 3.41 F
254 255 0.167908 TCAATTGCACGGCTTAAGCG 59.832 50.0 20.80 17.45 43.26 4.68 F
973 999 0.335019 TCCTCCCATTCTCACCGAGA 59.665 55.0 0.00 0.00 36.86 4.04 F
1639 1809 0.385390 CCTGGTTGTGCAAGTGTTCC 59.615 55.0 0.00 0.00 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1855 2034 0.038744 AGTCAGCCATTTGTCCCCAG 59.961 55.000 0.00 0.0 0.00 4.45 R
1898 2077 2.117206 AGAACCCATGGCGGCAAA 59.883 55.556 18.31 0.0 0.00 3.68 R
2076 2255 4.410400 GGTGCCAAGGTAGCCGCT 62.410 66.667 0.00 0.0 0.00 5.52 R
2549 2734 3.434319 GGCTCGTACCCGTCGTGA 61.434 66.667 0.00 0.0 35.01 4.35 R
3513 3706 1.066430 GCCTCTCCCACGTGATTGTTA 60.066 52.381 19.30 0.0 0.00 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.886132 AGTAACATAGGGAGTAATTTGTAGTTG 57.114 33.333 0.00 0.00 0.00 3.16
36 37 9.106070 GTAACATAGGGAGTAATTTGTAGTTGG 57.894 37.037 0.00 0.00 0.00 3.77
37 38 7.504926 ACATAGGGAGTAATTTGTAGTTGGA 57.495 36.000 0.00 0.00 0.00 3.53
38 39 8.102484 ACATAGGGAGTAATTTGTAGTTGGAT 57.898 34.615 0.00 0.00 0.00 3.41
39 40 7.993183 ACATAGGGAGTAATTTGTAGTTGGATG 59.007 37.037 0.00 0.00 0.00 3.51
40 41 5.755849 AGGGAGTAATTTGTAGTTGGATGG 58.244 41.667 0.00 0.00 0.00 3.51
41 42 5.253096 AGGGAGTAATTTGTAGTTGGATGGT 59.747 40.000 0.00 0.00 0.00 3.55
42 43 5.949952 GGGAGTAATTTGTAGTTGGATGGTT 59.050 40.000 0.00 0.00 0.00 3.67
43 44 6.127730 GGGAGTAATTTGTAGTTGGATGGTTG 60.128 42.308 0.00 0.00 0.00 3.77
44 45 6.657541 GGAGTAATTTGTAGTTGGATGGTTGA 59.342 38.462 0.00 0.00 0.00 3.18
45 46 7.175990 GGAGTAATTTGTAGTTGGATGGTTGAA 59.824 37.037 0.00 0.00 0.00 2.69
46 47 8.110860 AGTAATTTGTAGTTGGATGGTTGAAG 57.889 34.615 0.00 0.00 0.00 3.02
47 48 5.982890 ATTTGTAGTTGGATGGTTGAAGG 57.017 39.130 0.00 0.00 0.00 3.46
48 49 3.433306 TGTAGTTGGATGGTTGAAGGG 57.567 47.619 0.00 0.00 0.00 3.95
49 50 2.983192 TGTAGTTGGATGGTTGAAGGGA 59.017 45.455 0.00 0.00 0.00 4.20
50 51 3.591527 TGTAGTTGGATGGTTGAAGGGAT 59.408 43.478 0.00 0.00 0.00 3.85
51 52 4.785914 TGTAGTTGGATGGTTGAAGGGATA 59.214 41.667 0.00 0.00 0.00 2.59
52 53 4.510167 AGTTGGATGGTTGAAGGGATAG 57.490 45.455 0.00 0.00 0.00 2.08
53 54 3.852578 AGTTGGATGGTTGAAGGGATAGT 59.147 43.478 0.00 0.00 0.00 2.12
54 55 4.292306 AGTTGGATGGTTGAAGGGATAGTT 59.708 41.667 0.00 0.00 0.00 2.24
55 56 4.235079 TGGATGGTTGAAGGGATAGTTG 57.765 45.455 0.00 0.00 0.00 3.16
56 57 3.591527 TGGATGGTTGAAGGGATAGTTGT 59.408 43.478 0.00 0.00 0.00 3.32
57 58 4.785914 TGGATGGTTGAAGGGATAGTTGTA 59.214 41.667 0.00 0.00 0.00 2.41
58 59 5.431731 TGGATGGTTGAAGGGATAGTTGTAT 59.568 40.000 0.00 0.00 0.00 2.29
59 60 5.998363 GGATGGTTGAAGGGATAGTTGTATC 59.002 44.000 0.00 0.00 35.19 2.24
72 73 7.331791 GGATAGTTGTATCCCAGCTTATTAGG 58.668 42.308 0.53 0.00 46.69 2.69
73 74 7.038231 GGATAGTTGTATCCCAGCTTATTAGGT 60.038 40.741 0.53 0.00 46.69 3.08
74 75 6.576778 AGTTGTATCCCAGCTTATTAGGTT 57.423 37.500 0.00 0.00 29.06 3.50
75 76 6.970191 AGTTGTATCCCAGCTTATTAGGTTT 58.030 36.000 0.00 0.00 29.06 3.27
76 77 7.054751 AGTTGTATCCCAGCTTATTAGGTTTC 58.945 38.462 0.00 0.00 29.06 2.78
77 78 6.569127 TGTATCCCAGCTTATTAGGTTTCA 57.431 37.500 0.00 0.00 0.00 2.69
78 79 6.964464 TGTATCCCAGCTTATTAGGTTTCAA 58.036 36.000 0.00 0.00 0.00 2.69
79 80 7.054124 TGTATCCCAGCTTATTAGGTTTCAAG 58.946 38.462 0.00 0.00 0.00 3.02
80 81 5.514500 TCCCAGCTTATTAGGTTTCAAGT 57.486 39.130 0.00 0.00 0.00 3.16
81 82 5.497474 TCCCAGCTTATTAGGTTTCAAGTC 58.503 41.667 0.00 0.00 0.00 3.01
82 83 4.640647 CCCAGCTTATTAGGTTTCAAGTCC 59.359 45.833 0.00 0.00 0.00 3.85
83 84 5.501156 CCAGCTTATTAGGTTTCAAGTCCT 58.499 41.667 0.00 0.00 37.80 3.85
84 85 6.352737 CCCAGCTTATTAGGTTTCAAGTCCTA 60.353 42.308 0.00 0.00 35.51 2.94
85 86 6.763610 CCAGCTTATTAGGTTTCAAGTCCTAG 59.236 42.308 0.00 0.00 37.57 3.02
86 87 7.331791 CAGCTTATTAGGTTTCAAGTCCTAGT 58.668 38.462 0.00 0.00 37.57 2.57
87 88 7.278868 CAGCTTATTAGGTTTCAAGTCCTAGTG 59.721 40.741 0.00 0.00 37.57 2.74
88 89 7.038231 AGCTTATTAGGTTTCAAGTCCTAGTGT 60.038 37.037 0.00 0.00 37.57 3.55
89 90 7.606839 GCTTATTAGGTTTCAAGTCCTAGTGTT 59.393 37.037 0.00 0.00 37.57 3.32
116 117 7.821595 AATTATACGTTTCTGTCGATGACAA 57.178 32.000 0.00 0.00 42.26 3.18
117 118 6.864560 TTATACGTTTCTGTCGATGACAAG 57.135 37.500 0.00 0.00 42.26 3.16
118 119 2.404215 ACGTTTCTGTCGATGACAAGG 58.596 47.619 0.89 0.00 42.26 3.61
119 120 1.126846 CGTTTCTGTCGATGACAAGGC 59.873 52.381 0.89 0.00 42.26 4.35
120 121 1.126846 GTTTCTGTCGATGACAAGGCG 59.873 52.381 0.89 0.00 42.26 5.52
121 122 0.317160 TTCTGTCGATGACAAGGCGT 59.683 50.000 0.89 0.00 42.26 5.68
122 123 0.317160 TCTGTCGATGACAAGGCGTT 59.683 50.000 0.89 0.00 42.26 4.84
123 124 1.148310 CTGTCGATGACAAGGCGTTT 58.852 50.000 0.89 0.00 42.26 3.60
124 125 2.029739 TCTGTCGATGACAAGGCGTTTA 60.030 45.455 0.89 0.00 42.26 2.01
125 126 2.063266 TGTCGATGACAAGGCGTTTAC 58.937 47.619 0.00 0.00 39.78 2.01
126 127 1.058695 GTCGATGACAAGGCGTTTACG 59.941 52.381 0.00 0.00 36.03 3.18
127 128 0.368907 CGATGACAAGGCGTTTACGG 59.631 55.000 4.29 0.00 40.23 4.02
128 129 1.435577 GATGACAAGGCGTTTACGGT 58.564 50.000 4.29 0.00 40.23 4.83
129 130 1.127951 GATGACAAGGCGTTTACGGTG 59.872 52.381 4.29 0.00 40.23 4.94
130 131 0.104487 TGACAAGGCGTTTACGGTGA 59.896 50.000 4.29 0.00 40.23 4.02
131 132 0.509929 GACAAGGCGTTTACGGTGAC 59.490 55.000 4.29 0.00 40.23 3.67
132 133 0.105408 ACAAGGCGTTTACGGTGACT 59.895 50.000 4.29 0.00 40.23 3.41
133 134 1.223187 CAAGGCGTTTACGGTGACTT 58.777 50.000 4.29 0.00 40.23 3.01
134 135 1.193874 CAAGGCGTTTACGGTGACTTC 59.806 52.381 4.29 0.00 40.23 3.01
135 136 0.665369 AGGCGTTTACGGTGACTTCG 60.665 55.000 4.29 0.00 40.23 3.79
136 137 0.940991 GGCGTTTACGGTGACTTCGT 60.941 55.000 4.29 0.00 43.64 3.85
137 138 1.665735 GGCGTTTACGGTGACTTCGTA 60.666 52.381 4.29 0.00 41.38 3.43
138 139 2.050691 GCGTTTACGGTGACTTCGTAA 58.949 47.619 4.29 3.34 46.82 3.18
144 145 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
145 146 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
146 147 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
147 148 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
148 149 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
149 150 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
150 151 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
151 152 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
152 153 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
153 154 8.747666 GTGACTTCGTAAATCTCAAGATGATAC 58.252 37.037 0.00 0.81 34.49 2.24
154 155 7.644157 TGACTTCGTAAATCTCAAGATGATACG 59.356 37.037 21.11 21.11 44.10 3.06
155 156 6.418226 ACTTCGTAAATCTCAAGATGATACGC 59.582 38.462 21.74 2.63 43.36 4.42
156 157 6.073327 TCGTAAATCTCAAGATGATACGCT 57.927 37.500 21.74 0.00 43.36 5.07
157 158 5.915196 TCGTAAATCTCAAGATGATACGCTG 59.085 40.000 21.74 7.72 43.36 5.18
158 159 5.117745 CGTAAATCTCAAGATGATACGCTGG 59.882 44.000 17.97 2.54 40.65 4.85
159 160 4.679373 AATCTCAAGATGATACGCTGGT 57.321 40.909 0.00 0.00 34.49 4.00
160 161 4.679373 ATCTCAAGATGATACGCTGGTT 57.321 40.909 0.00 0.00 32.68 3.67
161 162 4.471904 TCTCAAGATGATACGCTGGTTT 57.528 40.909 0.00 0.00 0.00 3.27
162 163 5.592104 TCTCAAGATGATACGCTGGTTTA 57.408 39.130 0.00 0.00 0.00 2.01
163 164 5.348986 TCTCAAGATGATACGCTGGTTTAC 58.651 41.667 0.00 0.00 0.00 2.01
164 165 5.127194 TCTCAAGATGATACGCTGGTTTACT 59.873 40.000 0.00 0.00 0.00 2.24
165 166 6.320418 TCTCAAGATGATACGCTGGTTTACTA 59.680 38.462 0.00 0.00 0.00 1.82
166 167 7.014326 TCTCAAGATGATACGCTGGTTTACTAT 59.986 37.037 0.00 0.00 0.00 2.12
167 168 7.497595 TCAAGATGATACGCTGGTTTACTATT 58.502 34.615 0.00 0.00 0.00 1.73
168 169 7.985184 TCAAGATGATACGCTGGTTTACTATTT 59.015 33.333 0.00 0.00 0.00 1.40
169 170 8.612619 CAAGATGATACGCTGGTTTACTATTTT 58.387 33.333 0.00 0.00 0.00 1.82
170 171 8.142994 AGATGATACGCTGGTTTACTATTTTG 57.857 34.615 0.00 0.00 0.00 2.44
171 172 7.985184 AGATGATACGCTGGTTTACTATTTTGA 59.015 33.333 0.00 0.00 0.00 2.69
172 173 7.908827 TGATACGCTGGTTTACTATTTTGAA 57.091 32.000 0.00 0.00 0.00 2.69
173 174 7.970384 TGATACGCTGGTTTACTATTTTGAAG 58.030 34.615 0.00 0.00 0.00 3.02
174 175 5.622770 ACGCTGGTTTACTATTTTGAAGG 57.377 39.130 0.00 0.00 0.00 3.46
175 176 5.067954 ACGCTGGTTTACTATTTTGAAGGT 58.932 37.500 0.00 0.00 0.00 3.50
176 177 5.048991 ACGCTGGTTTACTATTTTGAAGGTG 60.049 40.000 0.00 0.00 0.00 4.00
177 178 5.161358 GCTGGTTTACTATTTTGAAGGTGC 58.839 41.667 0.00 0.00 0.00 5.01
178 179 5.048013 GCTGGTTTACTATTTTGAAGGTGCT 60.048 40.000 0.00 0.00 0.00 4.40
179 180 6.569179 TGGTTTACTATTTTGAAGGTGCTC 57.431 37.500 0.00 0.00 0.00 4.26
180 181 6.065374 TGGTTTACTATTTTGAAGGTGCTCA 58.935 36.000 0.00 0.00 0.00 4.26
181 182 6.719370 TGGTTTACTATTTTGAAGGTGCTCAT 59.281 34.615 0.00 0.00 0.00 2.90
182 183 7.885922 TGGTTTACTATTTTGAAGGTGCTCATA 59.114 33.333 0.00 0.00 0.00 2.15
183 184 8.182227 GGTTTACTATTTTGAAGGTGCTCATAC 58.818 37.037 0.00 0.00 0.00 2.39
184 185 8.947115 GTTTACTATTTTGAAGGTGCTCATACT 58.053 33.333 0.00 0.00 0.00 2.12
185 186 6.992063 ACTATTTTGAAGGTGCTCATACTG 57.008 37.500 0.00 0.00 0.00 2.74
186 187 6.711277 ACTATTTTGAAGGTGCTCATACTGA 58.289 36.000 0.00 0.00 0.00 3.41
187 188 7.341805 ACTATTTTGAAGGTGCTCATACTGAT 58.658 34.615 0.00 0.00 0.00 2.90
188 189 8.486210 ACTATTTTGAAGGTGCTCATACTGATA 58.514 33.333 0.00 0.00 0.00 2.15
189 190 9.330063 CTATTTTGAAGGTGCTCATACTGATAA 57.670 33.333 0.00 0.00 0.00 1.75
190 191 7.615582 TTTTGAAGGTGCTCATACTGATAAG 57.384 36.000 0.00 0.00 0.00 1.73
191 192 6.544928 TTGAAGGTGCTCATACTGATAAGA 57.455 37.500 0.00 0.00 0.00 2.10
192 193 6.737720 TGAAGGTGCTCATACTGATAAGAT 57.262 37.500 0.00 0.00 0.00 2.40
193 194 6.519382 TGAAGGTGCTCATACTGATAAGATG 58.481 40.000 0.00 0.00 0.00 2.90
194 195 6.098838 TGAAGGTGCTCATACTGATAAGATGT 59.901 38.462 0.00 0.00 0.00 3.06
195 196 5.851720 AGGTGCTCATACTGATAAGATGTG 58.148 41.667 0.00 0.00 0.00 3.21
196 197 5.365025 AGGTGCTCATACTGATAAGATGTGT 59.635 40.000 0.00 0.00 0.00 3.72
197 198 5.464722 GGTGCTCATACTGATAAGATGTGTG 59.535 44.000 0.00 0.00 0.00 3.82
198 199 6.045318 GTGCTCATACTGATAAGATGTGTGT 58.955 40.000 0.00 0.00 0.00 3.72
199 200 6.019237 GTGCTCATACTGATAAGATGTGTGTG 60.019 42.308 0.00 0.00 0.00 3.82
200 201 6.045318 GCTCATACTGATAAGATGTGTGTGT 58.955 40.000 0.00 0.00 0.00 3.72
201 202 6.019237 GCTCATACTGATAAGATGTGTGTGTG 60.019 42.308 0.00 0.00 0.00 3.82
202 203 6.935167 TCATACTGATAAGATGTGTGTGTGT 58.065 36.000 0.00 0.00 0.00 3.72
203 204 7.386059 TCATACTGATAAGATGTGTGTGTGTT 58.614 34.615 0.00 0.00 0.00 3.32
204 205 7.877612 TCATACTGATAAGATGTGTGTGTGTTT 59.122 33.333 0.00 0.00 0.00 2.83
205 206 9.150348 CATACTGATAAGATGTGTGTGTGTTTA 57.850 33.333 0.00 0.00 0.00 2.01
206 207 9.890629 ATACTGATAAGATGTGTGTGTGTTTAT 57.109 29.630 0.00 0.00 0.00 1.40
207 208 8.032952 ACTGATAAGATGTGTGTGTGTTTATG 57.967 34.615 0.00 0.00 0.00 1.90
208 209 7.661437 ACTGATAAGATGTGTGTGTGTTTATGT 59.339 33.333 0.00 0.00 0.00 2.29
209 210 8.389779 TGATAAGATGTGTGTGTGTTTATGTT 57.610 30.769 0.00 0.00 0.00 2.71
210 211 8.845227 TGATAAGATGTGTGTGTGTTTATGTTT 58.155 29.630 0.00 0.00 0.00 2.83
211 212 9.677567 GATAAGATGTGTGTGTGTTTATGTTTT 57.322 29.630 0.00 0.00 0.00 2.43
214 215 9.862371 AAGATGTGTGTGTGTTTATGTTTTAAA 57.138 25.926 0.00 0.00 0.00 1.52
215 216 9.862371 AGATGTGTGTGTGTTTATGTTTTAAAA 57.138 25.926 0.00 0.00 0.00 1.52
234 235 4.600692 AAAAACCCTTAAAATGCTCGCT 57.399 36.364 0.00 0.00 0.00 4.93
235 236 4.600692 AAAACCCTTAAAATGCTCGCTT 57.399 36.364 0.00 0.00 0.00 4.68
236 237 3.850122 AACCCTTAAAATGCTCGCTTC 57.150 42.857 0.00 0.00 0.00 3.86
237 238 2.790433 ACCCTTAAAATGCTCGCTTCA 58.210 42.857 0.00 0.00 0.00 3.02
238 239 3.153919 ACCCTTAAAATGCTCGCTTCAA 58.846 40.909 0.00 0.00 0.00 2.69
239 240 3.763897 ACCCTTAAAATGCTCGCTTCAAT 59.236 39.130 0.00 0.00 0.00 2.57
246 247 1.512734 GCTCGCTTCAATTGCACGG 60.513 57.895 0.00 0.72 0.00 4.94
254 255 0.167908 TCAATTGCACGGCTTAAGCG 59.832 50.000 20.80 17.45 43.26 4.68
257 258 0.447801 ATTGCACGGCTTAAGCGAAG 59.552 50.000 20.80 16.21 43.26 3.79
266 267 1.630148 CTTAAGCGAAGTCCAGTCGG 58.370 55.000 0.00 0.00 38.93 4.79
269 270 4.373116 GCGAAGTCCAGTCGGCCA 62.373 66.667 2.24 0.00 38.93 5.36
270 271 2.125912 CGAAGTCCAGTCGGCCAG 60.126 66.667 2.24 0.00 34.85 4.85
287 288 1.402325 CCAGTCACGTTACGCATCTCA 60.402 52.381 4.09 0.00 0.00 3.27
314 315 2.702592 TCCGAAAACACTCCAGTTGT 57.297 45.000 0.00 0.00 0.00 3.32
322 323 4.497291 AACACTCCAGTTGTAAAGGACA 57.503 40.909 0.00 0.00 35.78 4.02
389 396 2.203070 CTAGCATCCCGCCACACC 60.203 66.667 0.00 0.00 44.04 4.16
409 416 1.694150 CCCGGCCAGAGATAATCTTCA 59.306 52.381 2.24 0.00 35.47 3.02
476 483 2.824041 CCTTGGCCCAACCGATCG 60.824 66.667 8.51 8.51 43.94 3.69
477 484 2.267642 CTTGGCCCAACCGATCGA 59.732 61.111 18.66 0.00 43.94 3.59
478 485 1.153168 CTTGGCCCAACCGATCGAT 60.153 57.895 18.66 0.00 43.94 3.59
495 506 2.095415 TCGATCTCACCTACACGTGTTG 60.095 50.000 28.55 24.39 35.18 3.33
517 528 4.181578 GACGTGTGGTGCTAATTAGTCAT 58.818 43.478 13.91 0.00 0.00 3.06
518 529 4.181578 ACGTGTGGTGCTAATTAGTCATC 58.818 43.478 13.91 12.32 0.00 2.92
519 530 4.180817 CGTGTGGTGCTAATTAGTCATCA 58.819 43.478 13.91 14.45 0.00 3.07
585 597 7.254387 CGAGAAACAAATTGAATCCTTGCAAAA 60.254 33.333 0.00 0.00 0.00 2.44
626 638 9.638239 TCAAAAGTGCAAATGGAAAAGATATAC 57.362 29.630 0.00 0.00 0.00 1.47
627 639 9.643693 CAAAAGTGCAAATGGAAAAGATATACT 57.356 29.630 0.00 0.00 0.00 2.12
634 646 9.273016 GCAAATGGAAAAGATATACTACTAGCA 57.727 33.333 0.00 0.00 0.00 3.49
728 741 1.867363 AGTATCCACTCCACTCCACC 58.133 55.000 0.00 0.00 0.00 4.61
777 795 2.048222 CAGTCGTCACCGCCACAT 60.048 61.111 0.00 0.00 0.00 3.21
873 892 0.911769 ACCGAGCTCCATTCATTCCA 59.088 50.000 8.47 0.00 0.00 3.53
914 935 6.747739 CGATAGAAAAGTCTCGTCATCTTCAA 59.252 38.462 0.00 0.00 35.12 2.69
942 968 1.821332 GCCAAGCAATCCCCTCTCG 60.821 63.158 0.00 0.00 0.00 4.04
957 983 2.356741 CCTCTCGTCTTCTCTTCCTCCT 60.357 54.545 0.00 0.00 0.00 3.69
958 984 2.943033 CTCTCGTCTTCTCTTCCTCCTC 59.057 54.545 0.00 0.00 0.00 3.71
960 986 1.107945 CGTCTTCTCTTCCTCCTCCC 58.892 60.000 0.00 0.00 0.00 4.30
962 988 2.758130 GTCTTCTCTTCCTCCTCCCAT 58.242 52.381 0.00 0.00 0.00 4.00
967 993 2.316067 TCTCTTCCTCCTCCCATTCTCA 59.684 50.000 0.00 0.00 0.00 3.27
968 994 2.433970 CTCTTCCTCCTCCCATTCTCAC 59.566 54.545 0.00 0.00 0.00 3.51
970 996 0.687757 TCCTCCTCCCATTCTCACCG 60.688 60.000 0.00 0.00 0.00 4.94
971 997 0.687757 CCTCCTCCCATTCTCACCGA 60.688 60.000 0.00 0.00 0.00 4.69
973 999 0.335019 TCCTCCCATTCTCACCGAGA 59.665 55.000 0.00 0.00 36.86 4.04
1278 1317 2.690778 GGTGTTCGTGATGCTGCCC 61.691 63.158 0.00 0.00 0.00 5.36
1402 1441 4.589675 GGTGGGGCGTGGTGGAAA 62.590 66.667 0.00 0.00 0.00 3.13
1404 1443 4.278513 TGGGGCGTGGTGGAAAGG 62.279 66.667 0.00 0.00 0.00 3.11
1407 1446 2.355115 GGCGTGGTGGAAAGGGAT 59.645 61.111 0.00 0.00 0.00 3.85
1410 1449 1.682849 CGTGGTGGAAAGGGATGGA 59.317 57.895 0.00 0.00 0.00 3.41
1543 1582 3.077359 GACTCCTGCAAGTAAGCAACAT 58.923 45.455 0.00 0.00 45.13 2.71
1615 1785 2.095212 GGGAGAAATTTGTCGGTTCAGC 60.095 50.000 9.04 0.00 0.00 4.26
1619 1789 3.057315 AGAAATTTGTCGGTTCAGCATGG 60.057 43.478 0.00 0.00 36.16 3.66
1639 1809 0.385390 CCTGGTTGTGCAAGTGTTCC 59.615 55.000 0.00 0.00 0.00 3.62
1769 1940 2.624838 CAATCCAAGTGGCAAGTGAAGT 59.375 45.455 0.00 0.00 34.44 3.01
1821 2000 2.010145 AGCTGATTATTCGCGTGTGT 57.990 45.000 5.77 0.00 0.00 3.72
1830 2009 3.740044 ATTCGCGTGTGTCAAATTAGG 57.260 42.857 5.77 0.00 0.00 2.69
1836 2015 3.126171 GCGTGTGTCAAATTAGGTGCATA 59.874 43.478 0.00 0.00 0.00 3.14
1839 2018 6.457663 GCGTGTGTCAAATTAGGTGCATAATA 60.458 38.462 0.00 0.00 0.00 0.98
1841 2020 8.128582 CGTGTGTCAAATTAGGTGCATAATAAT 58.871 33.333 0.00 0.00 0.00 1.28
1842 2021 9.801873 GTGTGTCAAATTAGGTGCATAATAATT 57.198 29.630 0.00 0.00 32.00 1.40
1898 2077 1.412079 TTGTTGTTTGCAGCATCCCT 58.588 45.000 0.00 0.00 35.79 4.20
1935 2114 2.915659 AGGAGGTGAACGCCGACA 60.916 61.111 0.00 0.00 44.78 4.35
2076 2255 2.357034 GCTTCCGCGACAGGTTCA 60.357 61.111 8.23 0.00 0.00 3.18
2077 2256 2.383527 GCTTCCGCGACAGGTTCAG 61.384 63.158 8.23 0.00 0.00 3.02
2087 2266 1.296715 CAGGTTCAGCGGCTACCTT 59.703 57.895 19.43 5.22 40.24 3.50
2216 2395 3.510360 AGTTCCAGTGCTACGACAAGTAT 59.490 43.478 0.00 0.00 34.34 2.12
2388 2570 3.254093 TCTTCCTCAAGTGGTACTCCA 57.746 47.619 0.00 0.00 42.05 3.86
2549 2734 0.738412 GGTACTACAACACGCGGCAT 60.738 55.000 12.47 0.00 0.00 4.40
2642 2827 4.749310 AAGGACGAGCAGCAGCCG 62.749 66.667 9.69 9.69 43.56 5.52
3010 3198 2.819595 CGCGGCATTGTAGGCAGT 60.820 61.111 0.00 0.00 0.00 4.40
3011 3199 2.793946 GCGGCATTGTAGGCAGTG 59.206 61.111 0.00 0.00 35.71 3.66
3093 3285 5.191722 GGGAAGGGGCTGTATATTATGATCA 59.808 44.000 0.00 0.00 0.00 2.92
3107 3299 1.229975 TGATCAGTGCGTGCAGGTTG 61.230 55.000 8.40 5.01 0.00 3.77
3202 3394 4.905429 TGTTGGAATTTCGGAGAAGATGA 58.095 39.130 0.00 0.00 45.90 2.92
3211 3403 5.490139 TTCGGAGAAGATGAAATTGCATC 57.510 39.130 17.57 17.57 45.90 3.91
3212 3404 3.879295 TCGGAGAAGATGAAATTGCATCC 59.121 43.478 20.94 7.76 44.47 3.51
3214 3406 4.277672 CGGAGAAGATGAAATTGCATCCAT 59.722 41.667 20.94 11.69 44.47 3.41
3215 3407 5.471116 CGGAGAAGATGAAATTGCATCCATA 59.529 40.000 20.94 0.00 44.47 2.74
3216 3408 6.150641 CGGAGAAGATGAAATTGCATCCATAT 59.849 38.462 20.94 9.31 44.47 1.78
3217 3409 7.536855 GGAGAAGATGAAATTGCATCCATATC 58.463 38.462 20.94 16.28 44.47 1.63
3218 3410 7.393796 GGAGAAGATGAAATTGCATCCATATCT 59.606 37.037 20.94 18.06 44.47 1.98
3219 3411 9.445878 GAGAAGATGAAATTGCATCCATATCTA 57.554 33.333 20.94 0.00 44.47 1.98
3220 3412 9.976776 AGAAGATGAAATTGCATCCATATCTAT 57.023 29.630 20.94 0.00 44.47 1.98
3262 3454 5.549742 AAAAATTCAAAGTGGCAGATCCA 57.450 34.783 0.00 0.00 44.18 3.41
3273 3465 3.743521 TGGCAGATCCAATTAATCTCGG 58.256 45.455 0.62 0.00 43.21 4.63
3274 3466 3.136443 TGGCAGATCCAATTAATCTCGGT 59.864 43.478 0.62 0.00 43.21 4.69
3275 3467 3.748568 GGCAGATCCAATTAATCTCGGTC 59.251 47.826 0.62 0.00 31.05 4.79
3276 3468 4.380531 GCAGATCCAATTAATCTCGGTCA 58.619 43.478 0.62 0.00 31.05 4.02
3277 3469 4.999950 GCAGATCCAATTAATCTCGGTCAT 59.000 41.667 0.62 0.00 31.05 3.06
3278 3470 5.121454 GCAGATCCAATTAATCTCGGTCATC 59.879 44.000 0.62 0.00 31.05 2.92
3279 3471 6.226052 CAGATCCAATTAATCTCGGTCATCA 58.774 40.000 0.62 0.00 31.05 3.07
3280 3472 6.707608 CAGATCCAATTAATCTCGGTCATCAA 59.292 38.462 0.62 0.00 31.05 2.57
3281 3473 7.227314 CAGATCCAATTAATCTCGGTCATCAAA 59.773 37.037 0.62 0.00 31.05 2.69
3282 3474 7.941238 AGATCCAATTAATCTCGGTCATCAAAT 59.059 33.333 0.00 0.00 0.00 2.32
3283 3475 7.496529 TCCAATTAATCTCGGTCATCAAATC 57.503 36.000 0.00 0.00 0.00 2.17
3284 3476 7.053498 TCCAATTAATCTCGGTCATCAAATCA 58.947 34.615 0.00 0.00 0.00 2.57
3285 3477 7.720957 TCCAATTAATCTCGGTCATCAAATCAT 59.279 33.333 0.00 0.00 0.00 2.45
3286 3478 7.806487 CCAATTAATCTCGGTCATCAAATCATG 59.194 37.037 0.00 0.00 0.00 3.07
3287 3479 8.347771 CAATTAATCTCGGTCATCAAATCATGT 58.652 33.333 0.00 0.00 0.00 3.21
3288 3480 5.998454 AATCTCGGTCATCAAATCATGTC 57.002 39.130 0.00 0.00 0.00 3.06
3289 3481 4.470334 TCTCGGTCATCAAATCATGTCA 57.530 40.909 0.00 0.00 0.00 3.58
3290 3482 4.831107 TCTCGGTCATCAAATCATGTCAA 58.169 39.130 0.00 0.00 0.00 3.18
3291 3483 5.430886 TCTCGGTCATCAAATCATGTCAAT 58.569 37.500 0.00 0.00 0.00 2.57
3292 3484 5.882000 TCTCGGTCATCAAATCATGTCAATT 59.118 36.000 0.00 0.00 0.00 2.32
3293 3485 5.882553 TCGGTCATCAAATCATGTCAATTG 58.117 37.500 0.00 0.00 0.00 2.32
3294 3486 5.647225 TCGGTCATCAAATCATGTCAATTGA 59.353 36.000 3.38 3.38 36.35 2.57
3295 3487 6.150809 TCGGTCATCAAATCATGTCAATTGAA 59.849 34.615 10.35 1.23 35.62 2.69
3296 3488 6.252015 CGGTCATCAAATCATGTCAATTGAAC 59.748 38.462 10.35 5.46 35.62 3.18
3297 3489 6.252015 GGTCATCAAATCATGTCAATTGAACG 59.748 38.462 10.35 1.66 35.62 3.95
3298 3490 7.022979 GTCATCAAATCATGTCAATTGAACGA 58.977 34.615 10.35 7.41 35.62 3.85
3299 3491 7.007725 GTCATCAAATCATGTCAATTGAACGAC 59.992 37.037 10.35 0.00 35.62 4.34
3300 3492 5.698832 TCAAATCATGTCAATTGAACGACC 58.301 37.500 10.35 0.00 0.00 4.79
3301 3493 5.473162 TCAAATCATGTCAATTGAACGACCT 59.527 36.000 10.35 0.00 0.00 3.85
3302 3494 6.652900 TCAAATCATGTCAATTGAACGACCTA 59.347 34.615 10.35 0.00 0.00 3.08
3303 3495 6.668541 AATCATGTCAATTGAACGACCTAG 57.331 37.500 10.35 0.00 0.00 3.02
3304 3496 5.400066 TCATGTCAATTGAACGACCTAGA 57.600 39.130 10.35 0.00 0.00 2.43
3305 3497 5.168569 TCATGTCAATTGAACGACCTAGAC 58.831 41.667 10.35 0.00 0.00 2.59
3306 3498 4.866508 TGTCAATTGAACGACCTAGACT 57.133 40.909 10.35 0.00 0.00 3.24
3307 3499 4.556233 TGTCAATTGAACGACCTAGACTG 58.444 43.478 10.35 0.00 0.00 3.51
3308 3500 3.368236 GTCAATTGAACGACCTAGACTGC 59.632 47.826 10.35 0.00 0.00 4.40
3309 3501 3.258372 TCAATTGAACGACCTAGACTGCT 59.742 43.478 5.45 0.00 0.00 4.24
3310 3502 3.963428 ATTGAACGACCTAGACTGCTT 57.037 42.857 0.00 0.00 0.00 3.91
3311 3503 3.299340 TTGAACGACCTAGACTGCTTC 57.701 47.619 0.00 0.00 0.00 3.86
3312 3504 2.235891 TGAACGACCTAGACTGCTTCA 58.764 47.619 0.00 0.00 0.00 3.02
3313 3505 2.626266 TGAACGACCTAGACTGCTTCAA 59.374 45.455 0.00 0.00 0.00 2.69
3314 3506 3.258372 TGAACGACCTAGACTGCTTCAAT 59.742 43.478 0.00 0.00 0.00 2.57
3315 3507 4.461431 TGAACGACCTAGACTGCTTCAATA 59.539 41.667 0.00 0.00 0.00 1.90
3316 3508 5.127194 TGAACGACCTAGACTGCTTCAATAT 59.873 40.000 0.00 0.00 0.00 1.28
3317 3509 5.189659 ACGACCTAGACTGCTTCAATATC 57.810 43.478 0.00 0.00 0.00 1.63
3318 3510 4.645136 ACGACCTAGACTGCTTCAATATCA 59.355 41.667 0.00 0.00 0.00 2.15
3319 3511 5.127194 ACGACCTAGACTGCTTCAATATCAA 59.873 40.000 0.00 0.00 0.00 2.57
3320 3512 5.689514 CGACCTAGACTGCTTCAATATCAAG 59.310 44.000 0.00 0.00 0.00 3.02
3321 3513 5.363939 ACCTAGACTGCTTCAATATCAAGC 58.636 41.667 10.98 10.98 45.59 4.01
3327 3519 3.680642 GCTTCAATATCAAGCGCTCAA 57.319 42.857 12.06 1.22 37.14 3.02
3328 3520 3.357897 GCTTCAATATCAAGCGCTCAAC 58.642 45.455 12.06 0.00 37.14 3.18
3329 3521 3.181507 GCTTCAATATCAAGCGCTCAACA 60.182 43.478 12.06 0.00 37.14 3.33
3330 3522 4.497006 GCTTCAATATCAAGCGCTCAACAT 60.497 41.667 12.06 2.76 37.14 2.71
3331 3523 4.541085 TCAATATCAAGCGCTCAACATG 57.459 40.909 12.06 4.71 0.00 3.21
3332 3524 3.940852 TCAATATCAAGCGCTCAACATGT 59.059 39.130 12.06 0.00 0.00 3.21
3333 3525 4.395854 TCAATATCAAGCGCTCAACATGTT 59.604 37.500 12.06 4.92 0.00 2.71
3334 3526 4.970662 ATATCAAGCGCTCAACATGTTT 57.029 36.364 12.06 0.00 0.00 2.83
3335 3527 6.093357 TCAATATCAAGCGCTCAACATGTTTA 59.907 34.615 12.06 0.00 0.00 2.01
3336 3528 3.811722 TCAAGCGCTCAACATGTTTAG 57.188 42.857 12.06 14.27 0.00 1.85
3337 3529 2.095768 TCAAGCGCTCAACATGTTTAGC 60.096 45.455 27.50 27.50 36.68 3.09
3341 3533 1.606606 GCTCAACATGTTTAGCGTGC 58.393 50.000 24.62 14.72 37.62 5.34
3342 3534 1.069296 GCTCAACATGTTTAGCGTGCA 60.069 47.619 24.62 0.00 37.62 4.57
3343 3535 2.843077 CTCAACATGTTTAGCGTGCAG 58.157 47.619 8.77 0.00 37.62 4.41
3344 3536 2.217750 TCAACATGTTTAGCGTGCAGT 58.782 42.857 8.77 0.00 37.62 4.40
3345 3537 2.616376 TCAACATGTTTAGCGTGCAGTT 59.384 40.909 8.77 0.00 37.62 3.16
3346 3538 3.810386 TCAACATGTTTAGCGTGCAGTTA 59.190 39.130 8.77 0.00 37.62 2.24
3347 3539 4.273724 TCAACATGTTTAGCGTGCAGTTAA 59.726 37.500 8.77 0.00 37.62 2.01
3348 3540 5.049060 TCAACATGTTTAGCGTGCAGTTAAT 60.049 36.000 8.77 0.00 37.62 1.40
3349 3541 5.371115 ACATGTTTAGCGTGCAGTTAATT 57.629 34.783 0.00 0.00 37.62 1.40
3350 3542 5.768317 ACATGTTTAGCGTGCAGTTAATTT 58.232 33.333 0.00 0.00 37.62 1.82
3351 3543 5.856455 ACATGTTTAGCGTGCAGTTAATTTC 59.144 36.000 0.00 0.00 37.62 2.17
3352 3544 5.425577 TGTTTAGCGTGCAGTTAATTTCA 57.574 34.783 0.00 0.00 0.00 2.69
3353 3545 6.007936 TGTTTAGCGTGCAGTTAATTTCAT 57.992 33.333 0.00 0.00 0.00 2.57
3354 3546 5.855925 TGTTTAGCGTGCAGTTAATTTCATG 59.144 36.000 0.00 0.00 0.00 3.07
3355 3547 2.867429 AGCGTGCAGTTAATTTCATGC 58.133 42.857 6.69 6.69 40.63 4.06
3356 3548 2.228582 AGCGTGCAGTTAATTTCATGCA 59.771 40.909 15.07 7.58 45.82 3.96
3453 3645 7.617533 ACTTTCAAATTAACGTGTATTGCAC 57.382 32.000 0.00 0.00 44.36 4.57
3466 3658 6.583912 GTGTATTGCACGTATACATTGACT 57.416 37.500 11.78 0.00 39.78 3.41
3467 3659 7.688478 GTGTATTGCACGTATACATTGACTA 57.312 36.000 11.78 0.00 39.78 2.59
3468 3660 7.774546 GTGTATTGCACGTATACATTGACTAG 58.225 38.462 11.78 0.00 39.78 2.57
3469 3661 7.434307 GTGTATTGCACGTATACATTGACTAGT 59.566 37.037 11.78 0.00 39.78 2.57
3470 3662 7.977293 TGTATTGCACGTATACATTGACTAGTT 59.023 33.333 5.75 0.00 34.46 2.24
3471 3663 9.454585 GTATTGCACGTATACATTGACTAGTTA 57.545 33.333 3.32 0.00 0.00 2.24
3472 3664 7.980742 TTGCACGTATACATTGACTAGTTAG 57.019 36.000 3.32 0.00 0.00 2.34
3501 3694 1.608283 CCTCCGTCAAGGACTCAAACC 60.608 57.143 0.00 0.00 45.98 3.27
3506 3699 3.317993 CCGTCAAGGACTCAAACCATTTT 59.682 43.478 0.00 0.00 45.00 1.82
3507 3700 4.537015 CGTCAAGGACTCAAACCATTTTC 58.463 43.478 0.00 0.00 0.00 2.29
3508 3701 4.556699 CGTCAAGGACTCAAACCATTTTCC 60.557 45.833 0.00 0.00 0.00 3.13
3511 3704 5.301805 TCAAGGACTCAAACCATTTTCCTTC 59.698 40.000 0.00 0.00 34.50 3.46
3513 3706 5.458595 AGGACTCAAACCATTTTCCTTCTT 58.541 37.500 0.00 0.00 0.00 2.52
3523 3716 6.677913 ACCATTTTCCTTCTTAACAATCACG 58.322 36.000 0.00 0.00 0.00 4.35
3524 3717 6.264518 ACCATTTTCCTTCTTAACAATCACGT 59.735 34.615 0.00 0.00 0.00 4.49
3536 3730 0.616111 AATCACGTGGGAGAGGCTCT 60.616 55.000 18.80 18.80 0.00 4.09
3549 3743 1.304381 GGCTCTCCACCCAAATGCA 60.304 57.895 0.00 0.00 0.00 3.96
3553 3747 2.099756 GCTCTCCACCCAAATGCATTAC 59.900 50.000 13.39 0.00 0.00 1.89
3557 3751 3.763360 CTCCACCCAAATGCATTACTCAA 59.237 43.478 13.39 0.00 0.00 3.02
3562 3756 2.599973 CCAAATGCATTACTCAAAGCGC 59.400 45.455 13.39 0.00 0.00 5.92
3564 3758 1.462616 ATGCATTACTCAAAGCGCCA 58.537 45.000 2.29 0.00 0.00 5.69
3589 3783 6.391537 AGAAGGCGAGTTTAAAGAGTTAGAG 58.608 40.000 0.00 0.00 0.00 2.43
3591 3785 4.527427 AGGCGAGTTTAAAGAGTTAGAGGT 59.473 41.667 0.00 0.00 0.00 3.85
3592 3786 5.713861 AGGCGAGTTTAAAGAGTTAGAGGTA 59.286 40.000 0.00 0.00 0.00 3.08
3617 3832 2.084610 CCATGACATATGGCGTCGAT 57.915 50.000 7.80 0.00 36.11 3.59
3649 3864 7.885009 AGTGTACTCCTAAATCTAGAAGTCC 57.115 40.000 0.00 0.00 0.00 3.85
3655 3870 8.073467 ACTCCTAAATCTAGAAGTCCAAAGAG 57.927 38.462 0.00 0.00 0.00 2.85
3673 3888 9.739276 TCCAAAGAGTAAAGTCATGAACAATAT 57.261 29.630 0.00 0.00 0.00 1.28
3693 3908 9.019656 ACAATATTTTTAGTGGTTACATGAGCA 57.980 29.630 0.00 0.00 0.00 4.26
3697 3912 4.471904 TTAGTGGTTACATGAGCAGAGG 57.528 45.455 0.00 0.00 0.00 3.69
3699 3914 0.911769 TGGTTACATGAGCAGAGGGG 59.088 55.000 0.00 0.00 0.00 4.79
3700 3915 0.912486 GGTTACATGAGCAGAGGGGT 59.088 55.000 0.00 0.00 0.00 4.95
3704 3919 1.077930 CATGAGCAGAGGGGTGGTG 60.078 63.158 0.00 0.00 0.00 4.17
3707 3922 3.644606 AGCAGAGGGGTGGTGCTG 61.645 66.667 0.00 0.00 45.81 4.41
3754 3969 3.689649 AGCGGTCAAACCATTTAGATCAC 59.310 43.478 0.00 0.00 38.47 3.06
3766 3981 6.043706 ACCATTTAGATCACCAGAATCCTAGG 59.956 42.308 0.82 0.82 0.00 3.02
3771 3986 4.476479 AGATCACCAGAATCCTAGGCTTTT 59.524 41.667 2.96 0.00 0.00 2.27
3773 3988 5.975988 TCACCAGAATCCTAGGCTTTTAT 57.024 39.130 2.96 0.00 0.00 1.40
3775 3990 7.446106 TCACCAGAATCCTAGGCTTTTATAA 57.554 36.000 2.96 0.00 0.00 0.98
3821 4036 9.064706 CAAGCAGAAAATAGAGAATGGTGATAT 57.935 33.333 0.00 0.00 0.00 1.63
3827 4042 8.783833 AAAATAGAGAATGGTGATATGATCGG 57.216 34.615 0.00 0.00 0.00 4.18
3842 4057 7.819415 TGATATGATCGGATCACCATTAACTTC 59.181 37.037 22.09 7.03 43.01 3.01
3845 4060 1.597663 CGGATCACCATTAACTTCCGC 59.402 52.381 0.00 0.00 39.56 5.54
3848 4063 0.609151 TCACCATTAACTTCCGCCGA 59.391 50.000 0.00 0.00 0.00 5.54
3849 4064 0.725117 CACCATTAACTTCCGCCGAC 59.275 55.000 0.00 0.00 0.00 4.79
3852 4067 2.014128 CCATTAACTTCCGCCGACATT 58.986 47.619 0.00 0.00 0.00 2.71
3855 4070 2.288961 TAACTTCCGCCGACATTCTC 57.711 50.000 0.00 0.00 0.00 2.87
3898 4113 7.016153 TCTGTTGTTCTTTATGACCCACTAT 57.984 36.000 0.00 0.00 0.00 2.12
3905 4120 7.827236 TGTTCTTTATGACCCACTATTCGATTT 59.173 33.333 0.00 0.00 0.00 2.17
3916 4131 7.866393 ACCCACTATTCGATTTTAAGATAGTCG 59.134 37.037 1.59 0.00 0.00 4.18
3931 4146 2.751166 AGTCGACACCAAGAGGATTG 57.249 50.000 19.50 0.00 38.69 2.67
3933 4148 2.069273 GTCGACACCAAGAGGATTGTG 58.931 52.381 11.55 0.00 38.69 3.33
3965 4180 3.328382 TGGTTTATGTTGAGAGGGTCG 57.672 47.619 0.00 0.00 0.00 4.79
3977 4192 3.632604 TGAGAGGGTCGCTATTAACTCTG 59.367 47.826 0.00 0.00 35.61 3.35
3986 4201 5.810587 GTCGCTATTAACTCTGGATTTCACA 59.189 40.000 0.00 0.00 0.00 3.58
3987 4202 6.480320 GTCGCTATTAACTCTGGATTTCACAT 59.520 38.462 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.886132 CAACTACAAATTACTCCCTATGTTACT 57.114 33.333 0.00 0.00 0.00 2.24
10 11 9.106070 CCAACTACAAATTACTCCCTATGTTAC 57.894 37.037 0.00 0.00 0.00 2.50
11 12 9.049050 TCCAACTACAAATTACTCCCTATGTTA 57.951 33.333 0.00 0.00 0.00 2.41
12 13 7.924541 TCCAACTACAAATTACTCCCTATGTT 58.075 34.615 0.00 0.00 0.00 2.71
13 14 7.504926 TCCAACTACAAATTACTCCCTATGT 57.495 36.000 0.00 0.00 0.00 2.29
14 15 7.445402 CCATCCAACTACAAATTACTCCCTATG 59.555 40.741 0.00 0.00 0.00 2.23
15 16 7.128883 ACCATCCAACTACAAATTACTCCCTAT 59.871 37.037 0.00 0.00 0.00 2.57
16 17 6.445786 ACCATCCAACTACAAATTACTCCCTA 59.554 38.462 0.00 0.00 0.00 3.53
17 18 5.253096 ACCATCCAACTACAAATTACTCCCT 59.747 40.000 0.00 0.00 0.00 4.20
18 19 5.506708 ACCATCCAACTACAAATTACTCCC 58.493 41.667 0.00 0.00 0.00 4.30
19 20 6.657541 TCAACCATCCAACTACAAATTACTCC 59.342 38.462 0.00 0.00 0.00 3.85
20 21 7.681939 TCAACCATCCAACTACAAATTACTC 57.318 36.000 0.00 0.00 0.00 2.59
21 22 7.176690 CCTTCAACCATCCAACTACAAATTACT 59.823 37.037 0.00 0.00 0.00 2.24
22 23 7.312899 CCTTCAACCATCCAACTACAAATTAC 58.687 38.462 0.00 0.00 0.00 1.89
23 24 6.435904 CCCTTCAACCATCCAACTACAAATTA 59.564 38.462 0.00 0.00 0.00 1.40
24 25 5.245977 CCCTTCAACCATCCAACTACAAATT 59.754 40.000 0.00 0.00 0.00 1.82
25 26 4.772100 CCCTTCAACCATCCAACTACAAAT 59.228 41.667 0.00 0.00 0.00 2.32
26 27 4.141135 TCCCTTCAACCATCCAACTACAAA 60.141 41.667 0.00 0.00 0.00 2.83
27 28 3.396276 TCCCTTCAACCATCCAACTACAA 59.604 43.478 0.00 0.00 0.00 2.41
28 29 2.983192 TCCCTTCAACCATCCAACTACA 59.017 45.455 0.00 0.00 0.00 2.74
29 30 3.713826 TCCCTTCAACCATCCAACTAC 57.286 47.619 0.00 0.00 0.00 2.73
30 31 5.036916 ACTATCCCTTCAACCATCCAACTA 58.963 41.667 0.00 0.00 0.00 2.24
31 32 3.852578 ACTATCCCTTCAACCATCCAACT 59.147 43.478 0.00 0.00 0.00 3.16
32 33 4.236527 ACTATCCCTTCAACCATCCAAC 57.763 45.455 0.00 0.00 0.00 3.77
33 34 4.044065 ACAACTATCCCTTCAACCATCCAA 59.956 41.667 0.00 0.00 0.00 3.53
34 35 3.591527 ACAACTATCCCTTCAACCATCCA 59.408 43.478 0.00 0.00 0.00 3.41
35 36 4.236527 ACAACTATCCCTTCAACCATCC 57.763 45.455 0.00 0.00 0.00 3.51
36 37 5.998363 GGATACAACTATCCCTTCAACCATC 59.002 44.000 0.00 0.00 42.06 3.51
37 38 5.941788 GGATACAACTATCCCTTCAACCAT 58.058 41.667 0.00 0.00 42.06 3.55
38 39 5.367945 GGATACAACTATCCCTTCAACCA 57.632 43.478 0.00 0.00 42.06 3.67
47 48 7.038231 ACCTAATAAGCTGGGATACAACTATCC 60.038 40.741 0.00 0.00 45.81 2.59
48 49 7.908453 ACCTAATAAGCTGGGATACAACTATC 58.092 38.462 0.00 0.00 39.74 2.08
49 50 7.873699 ACCTAATAAGCTGGGATACAACTAT 57.126 36.000 0.00 0.00 39.74 2.12
50 51 7.685849 AACCTAATAAGCTGGGATACAACTA 57.314 36.000 0.00 0.00 39.74 2.24
51 52 6.576778 AACCTAATAAGCTGGGATACAACT 57.423 37.500 0.00 0.00 39.74 3.16
52 53 6.826741 TGAAACCTAATAAGCTGGGATACAAC 59.173 38.462 0.00 0.00 39.74 3.32
53 54 6.964464 TGAAACCTAATAAGCTGGGATACAA 58.036 36.000 0.00 0.00 39.74 2.41
54 55 6.569127 TGAAACCTAATAAGCTGGGATACA 57.431 37.500 0.00 0.00 39.74 2.29
55 56 7.054751 ACTTGAAACCTAATAAGCTGGGATAC 58.945 38.462 0.00 0.00 0.00 2.24
56 57 7.208064 ACTTGAAACCTAATAAGCTGGGATA 57.792 36.000 0.00 0.00 0.00 2.59
57 58 6.079712 ACTTGAAACCTAATAAGCTGGGAT 57.920 37.500 0.00 0.00 0.00 3.85
58 59 5.497474 GACTTGAAACCTAATAAGCTGGGA 58.503 41.667 0.00 0.00 0.00 4.37
59 60 4.640647 GGACTTGAAACCTAATAAGCTGGG 59.359 45.833 0.00 0.00 0.00 4.45
60 61 5.501156 AGGACTTGAAACCTAATAAGCTGG 58.499 41.667 0.00 0.00 34.47 4.85
61 62 7.278868 CACTAGGACTTGAAACCTAATAAGCTG 59.721 40.741 0.00 0.00 38.14 4.24
62 63 7.038231 ACACTAGGACTTGAAACCTAATAAGCT 60.038 37.037 0.00 0.00 38.14 3.74
63 64 7.104290 ACACTAGGACTTGAAACCTAATAAGC 58.896 38.462 0.00 0.00 38.14 3.09
90 91 9.524106 TTGTCATCGACAGAAACGTATAATTAT 57.476 29.630 2.97 2.97 43.69 1.28
91 92 8.914328 TTGTCATCGACAGAAACGTATAATTA 57.086 30.769 0.00 0.00 43.69 1.40
92 93 7.010183 CCTTGTCATCGACAGAAACGTATAATT 59.990 37.037 0.00 0.00 43.69 1.40
93 94 6.475727 CCTTGTCATCGACAGAAACGTATAAT 59.524 38.462 0.00 0.00 43.69 1.28
94 95 5.803461 CCTTGTCATCGACAGAAACGTATAA 59.197 40.000 0.00 0.00 43.69 0.98
95 96 5.337554 CCTTGTCATCGACAGAAACGTATA 58.662 41.667 0.00 0.00 43.69 1.47
96 97 4.174009 CCTTGTCATCGACAGAAACGTAT 58.826 43.478 0.00 0.00 43.69 3.06
97 98 3.571571 CCTTGTCATCGACAGAAACGTA 58.428 45.455 0.00 0.00 43.69 3.57
98 99 2.404215 CCTTGTCATCGACAGAAACGT 58.596 47.619 0.00 0.00 43.69 3.99
99 100 1.126846 GCCTTGTCATCGACAGAAACG 59.873 52.381 0.00 0.00 43.69 3.60
100 101 1.126846 CGCCTTGTCATCGACAGAAAC 59.873 52.381 0.00 0.00 43.69 2.78
101 102 1.270094 ACGCCTTGTCATCGACAGAAA 60.270 47.619 0.00 0.00 43.69 2.52
102 103 0.317160 ACGCCTTGTCATCGACAGAA 59.683 50.000 0.00 0.00 43.69 3.02
103 104 0.317160 AACGCCTTGTCATCGACAGA 59.683 50.000 0.00 0.00 43.69 3.41
104 105 1.148310 AAACGCCTTGTCATCGACAG 58.852 50.000 0.00 0.00 43.69 3.51
105 106 2.063266 GTAAACGCCTTGTCATCGACA 58.937 47.619 0.00 0.00 41.09 4.35
106 107 1.058695 CGTAAACGCCTTGTCATCGAC 59.941 52.381 0.00 0.00 0.00 4.20
107 108 1.342555 CGTAAACGCCTTGTCATCGA 58.657 50.000 0.00 0.00 0.00 3.59
108 109 0.368907 CCGTAAACGCCTTGTCATCG 59.631 55.000 0.00 0.00 38.18 3.84
109 110 1.127951 CACCGTAAACGCCTTGTCATC 59.872 52.381 0.00 0.00 38.18 2.92
110 111 1.153353 CACCGTAAACGCCTTGTCAT 58.847 50.000 0.00 0.00 38.18 3.06
111 112 0.104487 TCACCGTAAACGCCTTGTCA 59.896 50.000 0.00 0.00 38.18 3.58
112 113 0.509929 GTCACCGTAAACGCCTTGTC 59.490 55.000 0.00 0.00 38.18 3.18
113 114 0.105408 AGTCACCGTAAACGCCTTGT 59.895 50.000 0.00 0.00 38.18 3.16
114 115 1.193874 GAAGTCACCGTAAACGCCTTG 59.806 52.381 0.00 0.00 38.18 3.61
115 116 1.505425 GAAGTCACCGTAAACGCCTT 58.495 50.000 0.00 0.00 38.18 4.35
116 117 0.665369 CGAAGTCACCGTAAACGCCT 60.665 55.000 0.00 0.00 38.18 5.52
117 118 0.940991 ACGAAGTCACCGTAAACGCC 60.941 55.000 0.00 0.00 29.74 5.68
118 119 1.685302 TACGAAGTCACCGTAAACGC 58.315 50.000 0.00 0.00 43.93 4.84
122 123 5.375417 TGAGATTTACGAAGTCACCGTAA 57.625 39.130 0.00 0.00 46.58 3.18
123 124 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
124 125 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
125 126 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
126 127 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
127 128 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
128 129 7.644157 CGTATCATCTTGAGATTTACGAAGTCA 59.356 37.037 18.96 0.00 41.60 3.41
129 130 7.357695 GCGTATCATCTTGAGATTTACGAAGTC 60.358 40.741 23.70 11.42 41.60 3.01
130 131 6.418226 GCGTATCATCTTGAGATTTACGAAGT 59.582 38.462 23.70 0.44 41.60 3.01
131 132 6.638873 AGCGTATCATCTTGAGATTTACGAAG 59.361 38.462 23.70 7.80 41.60 3.79
132 133 6.417930 CAGCGTATCATCTTGAGATTTACGAA 59.582 38.462 23.70 0.00 41.60 3.85
133 134 5.915196 CAGCGTATCATCTTGAGATTTACGA 59.085 40.000 23.70 8.48 41.60 3.43
134 135 5.117745 CCAGCGTATCATCTTGAGATTTACG 59.882 44.000 19.19 19.19 41.77 3.18
135 136 5.986135 ACCAGCGTATCATCTTGAGATTTAC 59.014 40.000 0.00 0.00 31.21 2.01
136 137 6.161855 ACCAGCGTATCATCTTGAGATTTA 57.838 37.500 0.00 0.00 31.21 1.40
137 138 5.028549 ACCAGCGTATCATCTTGAGATTT 57.971 39.130 0.00 0.00 31.21 2.17
138 139 4.679373 ACCAGCGTATCATCTTGAGATT 57.321 40.909 0.00 0.00 31.21 2.40
139 140 4.679373 AACCAGCGTATCATCTTGAGAT 57.321 40.909 0.00 0.00 34.56 2.75
140 141 4.471904 AAACCAGCGTATCATCTTGAGA 57.528 40.909 0.00 0.00 0.00 3.27
141 142 5.352284 AGTAAACCAGCGTATCATCTTGAG 58.648 41.667 0.00 0.00 0.00 3.02
142 143 5.339008 AGTAAACCAGCGTATCATCTTGA 57.661 39.130 0.00 0.00 0.00 3.02
143 144 7.715265 AATAGTAAACCAGCGTATCATCTTG 57.285 36.000 0.00 0.00 0.00 3.02
144 145 8.612619 CAAAATAGTAAACCAGCGTATCATCTT 58.387 33.333 0.00 0.00 0.00 2.40
145 146 7.985184 TCAAAATAGTAAACCAGCGTATCATCT 59.015 33.333 0.00 0.00 0.00 2.90
146 147 8.138365 TCAAAATAGTAAACCAGCGTATCATC 57.862 34.615 0.00 0.00 0.00 2.92
147 148 8.500753 TTCAAAATAGTAAACCAGCGTATCAT 57.499 30.769 0.00 0.00 0.00 2.45
148 149 7.065324 CCTTCAAAATAGTAAACCAGCGTATCA 59.935 37.037 0.00 0.00 0.00 2.15
149 150 7.065443 ACCTTCAAAATAGTAAACCAGCGTATC 59.935 37.037 0.00 0.00 0.00 2.24
150 151 6.882678 ACCTTCAAAATAGTAAACCAGCGTAT 59.117 34.615 0.00 0.00 0.00 3.06
151 152 6.148150 CACCTTCAAAATAGTAAACCAGCGTA 59.852 38.462 0.00 0.00 0.00 4.42
152 153 5.048991 CACCTTCAAAATAGTAAACCAGCGT 60.049 40.000 0.00 0.00 0.00 5.07
153 154 5.390613 CACCTTCAAAATAGTAAACCAGCG 58.609 41.667 0.00 0.00 0.00 5.18
154 155 5.048013 AGCACCTTCAAAATAGTAAACCAGC 60.048 40.000 0.00 0.00 0.00 4.85
155 156 6.206634 TGAGCACCTTCAAAATAGTAAACCAG 59.793 38.462 0.00 0.00 0.00 4.00
156 157 6.065374 TGAGCACCTTCAAAATAGTAAACCA 58.935 36.000 0.00 0.00 0.00 3.67
157 158 6.569179 TGAGCACCTTCAAAATAGTAAACC 57.431 37.500 0.00 0.00 0.00 3.27
158 159 8.947115 AGTATGAGCACCTTCAAAATAGTAAAC 58.053 33.333 0.00 0.00 0.00 2.01
159 160 8.946085 CAGTATGAGCACCTTCAAAATAGTAAA 58.054 33.333 0.00 0.00 39.69 2.01
160 161 8.318412 TCAGTATGAGCACCTTCAAAATAGTAA 58.682 33.333 0.00 0.00 42.56 2.24
161 162 7.847096 TCAGTATGAGCACCTTCAAAATAGTA 58.153 34.615 0.00 0.00 42.56 1.82
162 163 6.711277 TCAGTATGAGCACCTTCAAAATAGT 58.289 36.000 0.00 0.00 42.56 2.12
179 180 7.601073 AACACACACACATCTTATCAGTATG 57.399 36.000 0.00 0.00 37.54 2.39
180 181 9.890629 ATAAACACACACACATCTTATCAGTAT 57.109 29.630 0.00 0.00 0.00 2.12
181 182 9.150348 CATAAACACACACACATCTTATCAGTA 57.850 33.333 0.00 0.00 0.00 2.74
182 183 7.661437 ACATAAACACACACACATCTTATCAGT 59.339 33.333 0.00 0.00 0.00 3.41
183 184 8.032952 ACATAAACACACACACATCTTATCAG 57.967 34.615 0.00 0.00 0.00 2.90
184 185 7.977789 ACATAAACACACACACATCTTATCA 57.022 32.000 0.00 0.00 0.00 2.15
185 186 9.677567 AAAACATAAACACACACACATCTTATC 57.322 29.630 0.00 0.00 0.00 1.75
188 189 9.862371 TTTAAAACATAAACACACACACATCTT 57.138 25.926 0.00 0.00 0.00 2.40
189 190 9.862371 TTTTAAAACATAAACACACACACATCT 57.138 25.926 0.00 0.00 0.00 2.90
213 214 4.600692 AGCGAGCATTTTAAGGGTTTTT 57.399 36.364 0.00 0.00 0.00 1.94
214 215 4.038642 TGAAGCGAGCATTTTAAGGGTTTT 59.961 37.500 0.00 0.00 0.00 2.43
215 216 3.572255 TGAAGCGAGCATTTTAAGGGTTT 59.428 39.130 0.00 0.00 0.00 3.27
216 217 3.153919 TGAAGCGAGCATTTTAAGGGTT 58.846 40.909 0.00 0.00 0.00 4.11
217 218 2.790433 TGAAGCGAGCATTTTAAGGGT 58.210 42.857 0.00 0.00 0.00 4.34
218 219 3.848272 TTGAAGCGAGCATTTTAAGGG 57.152 42.857 0.00 0.00 0.00 3.95
219 220 4.032104 GCAATTGAAGCGAGCATTTTAAGG 59.968 41.667 10.34 0.00 0.00 2.69
220 221 4.622313 TGCAATTGAAGCGAGCATTTTAAG 59.378 37.500 10.34 0.00 33.85 1.85
221 222 4.385447 GTGCAATTGAAGCGAGCATTTTAA 59.615 37.500 10.34 0.00 37.56 1.52
222 223 3.919804 GTGCAATTGAAGCGAGCATTTTA 59.080 39.130 10.34 0.00 37.56 1.52
223 224 2.733026 GTGCAATTGAAGCGAGCATTTT 59.267 40.909 10.34 0.00 37.56 1.82
224 225 2.331194 GTGCAATTGAAGCGAGCATTT 58.669 42.857 10.34 0.00 37.56 2.32
225 226 1.730121 CGTGCAATTGAAGCGAGCATT 60.730 47.619 10.34 0.00 37.56 3.56
226 227 0.179181 CGTGCAATTGAAGCGAGCAT 60.179 50.000 10.34 0.00 37.56 3.79
227 228 1.207339 CGTGCAATTGAAGCGAGCA 59.793 52.632 10.34 0.00 33.85 4.26
228 229 1.512734 CCGTGCAATTGAAGCGAGC 60.513 57.895 10.34 0.00 33.85 5.03
229 230 1.512734 GCCGTGCAATTGAAGCGAG 60.513 57.895 10.34 5.49 33.85 5.03
230 231 1.514678 AAGCCGTGCAATTGAAGCGA 61.515 50.000 10.34 0.00 33.85 4.93
231 232 0.167908 TAAGCCGTGCAATTGAAGCG 59.832 50.000 10.34 9.46 33.85 4.68
232 233 2.253603 CTTAAGCCGTGCAATTGAAGC 58.746 47.619 10.34 5.50 0.00 3.86
233 234 2.253603 GCTTAAGCCGTGCAATTGAAG 58.746 47.619 17.00 2.30 34.31 3.02
234 235 1.400888 CGCTTAAGCCGTGCAATTGAA 60.401 47.619 21.53 0.00 37.91 2.69
235 236 0.167908 CGCTTAAGCCGTGCAATTGA 59.832 50.000 21.53 0.00 37.91 2.57
236 237 0.167908 TCGCTTAAGCCGTGCAATTG 59.832 50.000 21.53 0.00 37.91 2.32
237 238 0.878416 TTCGCTTAAGCCGTGCAATT 59.122 45.000 21.53 0.00 37.91 2.32
238 239 0.447801 CTTCGCTTAAGCCGTGCAAT 59.552 50.000 21.53 0.00 37.91 3.56
239 240 0.882927 ACTTCGCTTAAGCCGTGCAA 60.883 50.000 21.53 6.15 38.93 4.08
246 247 0.992802 CGACTGGACTTCGCTTAAGC 59.007 55.000 17.83 17.83 38.93 3.09
266 267 0.736325 AGATGCGTAACGTGACTGGC 60.736 55.000 0.59 0.00 0.00 4.85
269 270 2.791503 CGATGAGATGCGTAACGTGACT 60.792 50.000 0.59 0.00 0.00 3.41
270 271 1.513178 CGATGAGATGCGTAACGTGAC 59.487 52.381 0.00 0.00 0.00 3.67
287 288 5.018539 TGGAGTGTTTTCGGATAATCGAT 57.981 39.130 0.00 0.00 39.03 3.59
314 315 6.588719 AAGCTAAATGCATTGTGTCCTTTA 57.411 33.333 13.82 0.00 45.94 1.85
322 323 4.094887 CGGTGACTAAGCTAAATGCATTGT 59.905 41.667 13.82 4.24 45.94 2.71
389 396 1.694150 TGAAGATTATCTCTGGCCGGG 59.306 52.381 12.87 2.35 33.29 5.73
453 460 1.303282 GGTTGGGCCAAGGACCTAG 59.697 63.158 21.62 0.00 45.59 3.02
458 465 2.674754 GATCGGTTGGGCCAAGGA 59.325 61.111 21.62 20.01 36.97 3.36
476 483 3.243336 GTCAACACGTGTAGGTGAGATC 58.757 50.000 23.69 6.89 40.38 2.75
477 484 2.351447 CGTCAACACGTGTAGGTGAGAT 60.351 50.000 23.69 0.00 41.42 2.75
478 485 1.002142 CGTCAACACGTGTAGGTGAGA 60.002 52.381 23.69 10.30 41.42 3.27
495 506 3.581755 TGACTAATTAGCACCACACGTC 58.418 45.455 12.54 1.10 0.00 4.34
517 528 6.097356 GTCGACACCTGTATTAGTTTCATGA 58.903 40.000 11.55 0.00 0.00 3.07
518 529 5.291128 GGTCGACACCTGTATTAGTTTCATG 59.709 44.000 18.91 0.00 40.00 3.07
519 530 5.416947 GGTCGACACCTGTATTAGTTTCAT 58.583 41.667 18.91 0.00 40.00 2.57
585 597 6.772716 TGCACTTTTGAGAAGAAGTTTATCCT 59.227 34.615 0.00 0.00 34.04 3.24
626 638 5.163280 ACCAGTAGTCTCCTAGTGCTAGTAG 60.163 48.000 5.62 0.00 41.44 2.57
627 639 4.720773 ACCAGTAGTCTCCTAGTGCTAGTA 59.279 45.833 5.62 0.00 41.44 1.82
628 640 3.524380 ACCAGTAGTCTCCTAGTGCTAGT 59.476 47.826 5.62 0.00 41.44 2.57
629 641 4.159244 ACCAGTAGTCTCCTAGTGCTAG 57.841 50.000 0.00 0.00 41.44 3.42
634 646 5.432390 TCCATTCTACCAGTAGTCTCCTAGT 59.568 44.000 4.81 0.00 34.84 2.57
728 741 2.046314 CTACTTGGCCACGGTGGG 60.046 66.667 27.41 13.72 38.19 4.61
873 892 2.530958 ATCGGTTGGGCGAACGGAAT 62.531 55.000 22.30 11.13 44.43 3.01
914 935 0.178924 ATTGCTTGGCTTGGGTCCTT 60.179 50.000 0.00 0.00 0.00 3.36
942 968 2.239681 TGGGAGGAGGAAGAGAAGAC 57.760 55.000 0.00 0.00 0.00 3.01
967 993 0.173708 GTGCTCGGAAGATTCTCGGT 59.826 55.000 0.00 0.00 40.84 4.69
968 994 0.867753 CGTGCTCGGAAGATTCTCGG 60.868 60.000 0.00 0.00 40.84 4.63
970 996 1.475441 CGCGTGCTCGGAAGATTCTC 61.475 60.000 10.52 0.00 40.84 2.87
971 997 1.517257 CGCGTGCTCGGAAGATTCT 60.517 57.895 10.52 0.00 40.84 2.40
973 999 0.525668 CTACGCGTGCTCGGAAGATT 60.526 55.000 24.59 0.00 40.84 2.40
974 1000 1.064296 CTACGCGTGCTCGGAAGAT 59.936 57.895 24.59 0.00 40.84 2.40
1416 1455 2.362120 CCCTCCCAGTCGTACCGT 60.362 66.667 0.00 0.00 0.00 4.83
1419 1458 1.722636 CGTAGCCCTCCCAGTCGTAC 61.723 65.000 0.00 0.00 0.00 3.67
1473 1512 1.227764 CATGACCATCTGGAGGCGG 60.228 63.158 2.55 0.00 38.94 6.13
1476 1515 1.504912 AGGACATGACCATCTGGAGG 58.495 55.000 16.63 0.00 38.94 4.30
1543 1582 3.149005 ACCAATTTAACCAAGGCGAGA 57.851 42.857 0.00 0.00 0.00 4.04
1586 1756 3.735746 CGACAAATTTCTCCCAAACTTGC 59.264 43.478 0.00 0.00 0.00 4.01
1588 1758 3.958147 ACCGACAAATTTCTCCCAAACTT 59.042 39.130 0.00 0.00 0.00 2.66
1590 1760 4.202070 TGAACCGACAAATTTCTCCCAAAC 60.202 41.667 0.00 0.00 0.00 2.93
1615 1785 1.290955 CTTGCACAACCAGGCCATG 59.709 57.895 5.01 0.00 0.00 3.66
1619 1789 0.249031 GAACACTTGCACAACCAGGC 60.249 55.000 0.00 0.00 0.00 4.85
1813 1992 1.724654 GCACCTAATTTGACACACGCG 60.725 52.381 3.53 3.53 0.00 6.01
1836 2015 8.364894 GTCCCCAGTTTTTGTTCACTAATTATT 58.635 33.333 0.00 0.00 0.00 1.40
1839 2018 5.659079 TGTCCCCAGTTTTTGTTCACTAATT 59.341 36.000 0.00 0.00 0.00 1.40
1841 2020 4.601084 TGTCCCCAGTTTTTGTTCACTAA 58.399 39.130 0.00 0.00 0.00 2.24
1842 2021 4.237976 TGTCCCCAGTTTTTGTTCACTA 57.762 40.909 0.00 0.00 0.00 2.74
1843 2022 3.094484 TGTCCCCAGTTTTTGTTCACT 57.906 42.857 0.00 0.00 0.00 3.41
1844 2023 3.878160 TTGTCCCCAGTTTTTGTTCAC 57.122 42.857 0.00 0.00 0.00 3.18
1845 2024 4.383552 CCATTTGTCCCCAGTTTTTGTTCA 60.384 41.667 0.00 0.00 0.00 3.18
1846 2025 4.126437 CCATTTGTCCCCAGTTTTTGTTC 58.874 43.478 0.00 0.00 0.00 3.18
1847 2026 3.684130 GCCATTTGTCCCCAGTTTTTGTT 60.684 43.478 0.00 0.00 0.00 2.83
1849 2028 2.104622 AGCCATTTGTCCCCAGTTTTTG 59.895 45.455 0.00 0.00 0.00 2.44
1852 2031 1.133199 TCAGCCATTTGTCCCCAGTTT 60.133 47.619 0.00 0.00 0.00 2.66
1853 2032 0.482446 TCAGCCATTTGTCCCCAGTT 59.518 50.000 0.00 0.00 0.00 3.16
1854 2033 0.251341 GTCAGCCATTTGTCCCCAGT 60.251 55.000 0.00 0.00 0.00 4.00
1855 2034 0.038744 AGTCAGCCATTTGTCCCCAG 59.961 55.000 0.00 0.00 0.00 4.45
1898 2077 2.117206 AGAACCCATGGCGGCAAA 59.883 55.556 18.31 0.00 0.00 3.68
2076 2255 4.410400 GGTGCCAAGGTAGCCGCT 62.410 66.667 0.00 0.00 0.00 5.52
2549 2734 3.434319 GGCTCGTACCCGTCGTGA 61.434 66.667 0.00 0.00 35.01 4.35
2852 3040 4.612536 ACGAACGCGACGAACCGT 62.613 61.111 28.40 17.60 45.10 4.83
2909 3097 4.624364 TGCCCAGTGTCGCACCTG 62.624 66.667 6.39 5.02 34.49 4.00
3007 3195 5.404066 TGATATGTGTACACAAACGTCACTG 59.596 40.000 31.01 0.00 45.41 3.66
3010 3198 5.290386 TGTGATATGTGTACACAAACGTCA 58.710 37.500 31.01 25.31 45.41 4.35
3011 3199 5.832568 TGTGATATGTGTACACAAACGTC 57.167 39.130 31.01 23.43 45.41 4.34
3107 3299 4.515191 TCGATTACAGCCATAAAATCCTGC 59.485 41.667 0.00 0.00 0.00 4.85
3240 3432 5.549742 TGGATCTGCCACTTTGAATTTTT 57.450 34.783 0.00 0.00 43.33 1.94
3253 3445 3.744660 ACCGAGATTAATTGGATCTGCC 58.255 45.455 9.96 0.00 34.13 4.85
3254 3446 4.380531 TGACCGAGATTAATTGGATCTGC 58.619 43.478 9.96 3.47 34.13 4.26
3255 3447 6.226052 TGATGACCGAGATTAATTGGATCTG 58.774 40.000 9.96 1.90 34.13 2.90
3256 3448 6.425210 TGATGACCGAGATTAATTGGATCT 57.575 37.500 8.74 6.01 36.60 2.75
3257 3449 7.496529 TTTGATGACCGAGATTAATTGGATC 57.503 36.000 8.74 0.00 0.00 3.36
3258 3450 7.720957 TGATTTGATGACCGAGATTAATTGGAT 59.279 33.333 8.74 0.00 0.00 3.41
3259 3451 7.053498 TGATTTGATGACCGAGATTAATTGGA 58.947 34.615 8.74 0.00 0.00 3.53
3260 3452 7.263100 TGATTTGATGACCGAGATTAATTGG 57.737 36.000 0.00 0.00 0.00 3.16
3261 3453 8.347771 ACATGATTTGATGACCGAGATTAATTG 58.652 33.333 0.00 0.00 0.00 2.32
3262 3454 8.455903 ACATGATTTGATGACCGAGATTAATT 57.544 30.769 0.00 0.00 0.00 1.40
3263 3455 7.716560 TGACATGATTTGATGACCGAGATTAAT 59.283 33.333 0.00 0.00 0.00 1.40
3264 3456 7.047271 TGACATGATTTGATGACCGAGATTAA 58.953 34.615 0.00 0.00 0.00 1.40
3265 3457 6.581712 TGACATGATTTGATGACCGAGATTA 58.418 36.000 0.00 0.00 0.00 1.75
3266 3458 5.430886 TGACATGATTTGATGACCGAGATT 58.569 37.500 0.00 0.00 0.00 2.40
3267 3459 5.027293 TGACATGATTTGATGACCGAGAT 57.973 39.130 0.00 0.00 0.00 2.75
3268 3460 4.470334 TGACATGATTTGATGACCGAGA 57.530 40.909 0.00 0.00 0.00 4.04
3269 3461 5.746307 ATTGACATGATTTGATGACCGAG 57.254 39.130 0.00 0.00 0.00 4.63
3270 3462 5.647225 TCAATTGACATGATTTGATGACCGA 59.353 36.000 3.38 0.00 0.00 4.69
3271 3463 5.882553 TCAATTGACATGATTTGATGACCG 58.117 37.500 3.38 0.00 0.00 4.79
3272 3464 6.252015 CGTTCAATTGACATGATTTGATGACC 59.748 38.462 7.89 0.00 0.00 4.02
3273 3465 7.007725 GTCGTTCAATTGACATGATTTGATGAC 59.992 37.037 7.89 7.51 35.20 3.06
3274 3466 7.022979 GTCGTTCAATTGACATGATTTGATGA 58.977 34.615 7.89 0.00 35.20 2.92
3275 3467 6.252015 GGTCGTTCAATTGACATGATTTGATG 59.748 38.462 7.89 0.00 36.83 3.07
3276 3468 6.151648 AGGTCGTTCAATTGACATGATTTGAT 59.848 34.615 7.89 0.00 36.83 2.57
3277 3469 5.473162 AGGTCGTTCAATTGACATGATTTGA 59.527 36.000 7.89 0.07 36.83 2.69
3278 3470 5.702865 AGGTCGTTCAATTGACATGATTTG 58.297 37.500 7.89 0.00 36.83 2.32
3279 3471 5.964958 AGGTCGTTCAATTGACATGATTT 57.035 34.783 7.89 1.73 36.83 2.17
3280 3472 6.313905 GTCTAGGTCGTTCAATTGACATGATT 59.686 38.462 7.89 6.42 36.83 2.57
3281 3473 5.812642 GTCTAGGTCGTTCAATTGACATGAT 59.187 40.000 7.89 0.64 36.83 2.45
3282 3474 5.047306 AGTCTAGGTCGTTCAATTGACATGA 60.047 40.000 7.89 7.87 36.83 3.07
3283 3475 5.062683 CAGTCTAGGTCGTTCAATTGACATG 59.937 44.000 7.89 5.68 36.83 3.21
3284 3476 5.171476 CAGTCTAGGTCGTTCAATTGACAT 58.829 41.667 7.89 0.00 36.83 3.06
3285 3477 4.556233 CAGTCTAGGTCGTTCAATTGACA 58.444 43.478 7.89 0.00 36.83 3.58
3286 3478 3.368236 GCAGTCTAGGTCGTTCAATTGAC 59.632 47.826 7.89 2.92 0.00 3.18
3287 3479 3.258372 AGCAGTCTAGGTCGTTCAATTGA 59.742 43.478 3.38 3.38 0.00 2.57
3288 3480 3.589988 AGCAGTCTAGGTCGTTCAATTG 58.410 45.455 0.00 0.00 0.00 2.32
3289 3481 3.963428 AGCAGTCTAGGTCGTTCAATT 57.037 42.857 0.00 0.00 0.00 2.32
3290 3482 3.258372 TGAAGCAGTCTAGGTCGTTCAAT 59.742 43.478 0.00 0.00 0.00 2.57
3291 3483 2.626266 TGAAGCAGTCTAGGTCGTTCAA 59.374 45.455 0.00 0.00 0.00 2.69
3292 3484 2.235891 TGAAGCAGTCTAGGTCGTTCA 58.764 47.619 0.00 0.00 0.00 3.18
3293 3485 3.299340 TTGAAGCAGTCTAGGTCGTTC 57.701 47.619 0.00 0.00 0.00 3.95
3294 3486 3.963428 ATTGAAGCAGTCTAGGTCGTT 57.037 42.857 0.00 0.00 0.00 3.85
3295 3487 4.645136 TGATATTGAAGCAGTCTAGGTCGT 59.355 41.667 0.00 0.00 0.00 4.34
3296 3488 5.188327 TGATATTGAAGCAGTCTAGGTCG 57.812 43.478 0.00 0.00 0.00 4.79
3297 3489 5.465056 GCTTGATATTGAAGCAGTCTAGGTC 59.535 44.000 13.05 0.00 44.43 3.85
3298 3490 5.363939 GCTTGATATTGAAGCAGTCTAGGT 58.636 41.667 13.05 0.00 44.43 3.08
3299 3491 4.447054 CGCTTGATATTGAAGCAGTCTAGG 59.553 45.833 16.44 0.56 45.15 3.02
3300 3492 4.084641 GCGCTTGATATTGAAGCAGTCTAG 60.085 45.833 16.44 4.70 45.15 2.43
3301 3493 3.804325 GCGCTTGATATTGAAGCAGTCTA 59.196 43.478 16.44 0.00 45.15 2.59
3302 3494 2.611292 GCGCTTGATATTGAAGCAGTCT 59.389 45.455 16.44 0.00 45.15 3.24
3303 3495 2.611292 AGCGCTTGATATTGAAGCAGTC 59.389 45.455 2.64 7.97 45.15 3.51
3304 3496 2.611292 GAGCGCTTGATATTGAAGCAGT 59.389 45.455 13.26 6.34 45.15 4.40
3305 3497 2.610833 TGAGCGCTTGATATTGAAGCAG 59.389 45.455 13.26 11.58 45.15 4.24
3306 3498 2.631267 TGAGCGCTTGATATTGAAGCA 58.369 42.857 13.26 0.00 45.15 3.91
3307 3499 3.181507 TGTTGAGCGCTTGATATTGAAGC 60.182 43.478 13.26 9.38 42.08 3.86
3308 3500 4.604843 TGTTGAGCGCTTGATATTGAAG 57.395 40.909 13.26 0.00 0.00 3.02
3309 3501 4.395854 ACATGTTGAGCGCTTGATATTGAA 59.604 37.500 13.26 0.00 0.00 2.69
3310 3502 3.940852 ACATGTTGAGCGCTTGATATTGA 59.059 39.130 13.26 0.00 0.00 2.57
3311 3503 4.282950 ACATGTTGAGCGCTTGATATTG 57.717 40.909 13.26 8.47 0.00 1.90
3312 3504 4.970662 AACATGTTGAGCGCTTGATATT 57.029 36.364 13.26 0.00 0.00 1.28
3313 3505 4.970662 AAACATGTTGAGCGCTTGATAT 57.029 36.364 13.26 4.24 0.00 1.63
3314 3506 4.201812 GCTAAACATGTTGAGCGCTTGATA 60.202 41.667 28.15 5.77 37.32 2.15
3315 3507 3.426695 GCTAAACATGTTGAGCGCTTGAT 60.427 43.478 28.15 4.88 37.32 2.57
3316 3508 2.095768 GCTAAACATGTTGAGCGCTTGA 60.096 45.455 28.15 0.00 37.32 3.02
3317 3509 2.245096 GCTAAACATGTTGAGCGCTTG 58.755 47.619 28.15 8.14 37.32 4.01
3318 3510 2.619013 GCTAAACATGTTGAGCGCTT 57.381 45.000 28.15 7.02 37.32 4.68
3322 3514 1.069296 TGCACGCTAAACATGTTGAGC 60.069 47.619 30.88 30.88 42.40 4.26
3323 3515 2.224079 ACTGCACGCTAAACATGTTGAG 59.776 45.455 17.57 17.57 0.00 3.02
3324 3516 2.217750 ACTGCACGCTAAACATGTTGA 58.782 42.857 12.82 3.11 0.00 3.18
3325 3517 2.686558 ACTGCACGCTAAACATGTTG 57.313 45.000 12.82 1.29 0.00 3.33
3326 3518 4.822036 TTAACTGCACGCTAAACATGTT 57.178 36.364 4.92 4.92 0.00 2.71
3327 3519 5.371115 AATTAACTGCACGCTAAACATGT 57.629 34.783 0.00 0.00 0.00 3.21
3328 3520 5.855925 TGAAATTAACTGCACGCTAAACATG 59.144 36.000 0.00 0.00 0.00 3.21
3329 3521 6.007936 TGAAATTAACTGCACGCTAAACAT 57.992 33.333 0.00 0.00 0.00 2.71
3330 3522 5.425577 TGAAATTAACTGCACGCTAAACA 57.574 34.783 0.00 0.00 0.00 2.83
3331 3523 5.220024 GCATGAAATTAACTGCACGCTAAAC 60.220 40.000 0.00 0.00 34.77 2.01
3332 3524 4.856487 GCATGAAATTAACTGCACGCTAAA 59.144 37.500 0.00 0.00 34.77 1.85
3333 3525 4.083057 TGCATGAAATTAACTGCACGCTAA 60.083 37.500 0.00 0.00 39.54 3.09
3334 3526 3.438434 TGCATGAAATTAACTGCACGCTA 59.562 39.130 0.00 0.00 39.54 4.26
3335 3527 2.228582 TGCATGAAATTAACTGCACGCT 59.771 40.909 0.00 0.00 39.54 5.07
3336 3528 2.594321 TGCATGAAATTAACTGCACGC 58.406 42.857 0.00 0.00 39.54 5.34
3337 3529 5.573296 TTTTGCATGAAATTAACTGCACG 57.427 34.783 0.00 0.00 43.74 5.34
3427 3619 9.337091 GTGCAATACACGTTAATTTGAAAGTAT 57.663 29.630 0.00 0.00 40.07 2.12
3428 3620 8.716619 GTGCAATACACGTTAATTTGAAAGTA 57.283 30.769 0.00 0.00 40.07 2.24
3429 3621 7.617533 GTGCAATACACGTTAATTTGAAAGT 57.382 32.000 0.00 0.00 40.07 2.66
3443 3635 6.583912 AGTCAATGTATACGTGCAATACAC 57.416 37.500 11.04 0.00 41.34 2.90
3444 3636 7.485810 ACTAGTCAATGTATACGTGCAATACA 58.514 34.615 11.18 11.18 42.39 2.29
3445 3637 7.925703 ACTAGTCAATGTATACGTGCAATAC 57.074 36.000 0.00 0.00 0.00 1.89
3446 3638 9.673454 CTAACTAGTCAATGTATACGTGCAATA 57.327 33.333 0.00 0.00 0.00 1.90
3447 3639 8.410912 TCTAACTAGTCAATGTATACGTGCAAT 58.589 33.333 0.00 0.00 0.00 3.56
3448 3640 7.764331 TCTAACTAGTCAATGTATACGTGCAA 58.236 34.615 0.00 0.00 0.00 4.08
3449 3641 7.324354 TCTAACTAGTCAATGTATACGTGCA 57.676 36.000 0.00 0.00 0.00 4.57
3450 3642 8.624701 TTTCTAACTAGTCAATGTATACGTGC 57.375 34.615 0.00 0.00 0.00 5.34
3501 3694 6.582295 CCACGTGATTGTTAAGAAGGAAAATG 59.418 38.462 19.30 0.00 0.00 2.32
3506 3699 3.325425 TCCCACGTGATTGTTAAGAAGGA 59.675 43.478 19.30 7.41 0.00 3.36
3507 3700 3.670625 TCCCACGTGATTGTTAAGAAGG 58.329 45.455 19.30 4.85 0.00 3.46
3508 3701 4.566004 TCTCCCACGTGATTGTTAAGAAG 58.434 43.478 19.30 0.00 0.00 2.85
3511 3704 3.262420 CCTCTCCCACGTGATTGTTAAG 58.738 50.000 19.30 4.82 0.00 1.85
3513 3706 1.066430 GCCTCTCCCACGTGATTGTTA 60.066 52.381 19.30 0.00 0.00 2.41
3536 3730 3.448093 TGAGTAATGCATTTGGGTGGA 57.552 42.857 18.75 0.00 0.00 4.02
3549 3743 2.749621 CCTTCTTGGCGCTTTGAGTAAT 59.250 45.455 7.64 0.00 0.00 1.89
3562 3756 4.065789 ACTCTTTAAACTCGCCTTCTTGG 58.934 43.478 0.00 0.00 39.35 3.61
3564 3758 6.756221 TCTAACTCTTTAAACTCGCCTTCTT 58.244 36.000 0.00 0.00 0.00 2.52
3579 3773 5.604231 TCATGGCATCATACCTCTAACTCTT 59.396 40.000 0.00 0.00 31.33 2.85
3613 3828 8.571461 TTTAGGAGTACACTTTAGAAGATCGA 57.429 34.615 0.00 0.00 0.00 3.59
3673 3888 5.705441 CCTCTGCTCATGTAACCACTAAAAA 59.295 40.000 0.00 0.00 0.00 1.94
3679 3894 1.407437 CCCCTCTGCTCATGTAACCAC 60.407 57.143 0.00 0.00 0.00 4.16
3691 3906 3.909086 GACAGCACCACCCCTCTGC 62.909 68.421 0.00 0.00 0.00 4.26
3693 3908 3.314331 CGACAGCACCACCCCTCT 61.314 66.667 0.00 0.00 0.00 3.69
3697 3912 2.358737 CTTCCGACAGCACCACCC 60.359 66.667 0.00 0.00 0.00 4.61
3699 3914 0.320771 ATGACTTCCGACAGCACCAC 60.321 55.000 0.00 0.00 0.00 4.16
3700 3915 0.320683 CATGACTTCCGACAGCACCA 60.321 55.000 0.00 0.00 0.00 4.17
3704 3919 1.795768 TGTTCATGACTTCCGACAGC 58.204 50.000 0.00 0.00 0.00 4.40
3706 3921 5.487433 ACATATTGTTCATGACTTCCGACA 58.513 37.500 0.00 0.00 0.00 4.35
3707 3922 6.422776 AACATATTGTTCATGACTTCCGAC 57.577 37.500 0.00 0.00 35.27 4.79
3754 3969 8.924511 TCAATTATAAAAGCCTAGGATTCTGG 57.075 34.615 13.76 0.00 0.00 3.86
3795 4010 6.748333 TCACCATTCTCTATTTTCTGCTTG 57.252 37.500 0.00 0.00 0.00 4.01
3821 4036 4.703897 GGAAGTTAATGGTGATCCGATCA 58.296 43.478 7.00 7.00 36.84 2.92
3827 4042 1.597663 CGGCGGAAGTTAATGGTGATC 59.402 52.381 0.00 0.00 0.00 2.92
3842 4057 2.202932 CCCAGAGAATGTCGGCGG 60.203 66.667 7.21 0.00 0.00 6.13
3845 4060 1.026718 GGTTGCCCAGAGAATGTCGG 61.027 60.000 0.00 0.00 0.00 4.79
3848 4063 2.042162 AGAATGGTTGCCCAGAGAATGT 59.958 45.455 0.00 0.00 46.15 2.71
3849 4064 2.731572 AGAATGGTTGCCCAGAGAATG 58.268 47.619 0.00 0.00 46.15 2.67
3852 4067 1.272092 CCAAGAATGGTTGCCCAGAGA 60.272 52.381 0.00 0.00 46.15 3.10
3865 4080 6.716628 TCATAAAGAACAACAGAGCCAAGAAT 59.283 34.615 0.00 0.00 0.00 2.40
3867 4082 5.470098 GTCATAAAGAACAACAGAGCCAAGA 59.530 40.000 0.00 0.00 0.00 3.02
3898 4113 6.623486 TGGTGTCGACTATCTTAAAATCGAA 58.377 36.000 17.92 0.00 42.86 3.71
3905 4120 5.258841 TCCTCTTGGTGTCGACTATCTTAA 58.741 41.667 17.92 3.05 34.23 1.85
3916 4131 3.409026 AGTCACAATCCTCTTGGTGTC 57.591 47.619 0.00 0.00 33.17 3.67
3931 4146 6.619801 ACATAAACCAACTCTGAAAGTCAC 57.380 37.500 0.00 0.00 37.17 3.67
3933 4148 7.226720 TCTCAACATAAACCAACTCTGAAAGTC 59.773 37.037 0.00 0.00 37.17 3.01
3965 4180 9.547753 TTCTATGTGAAATCCAGAGTTAATAGC 57.452 33.333 0.00 0.00 0.00 2.97
3977 4192 7.648142 TGCCGATATTTTTCTATGTGAAATCC 58.352 34.615 0.00 0.00 43.34 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.