Multiple sequence alignment - TraesCS1B01G228500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G228500 chr1B 100.000 4903 0 0 1 4903 409681918 409677016 0.000000e+00 9055.0
1 TraesCS1B01G228500 chr1B 95.245 715 32 2 1 714 28546479 28547192 0.000000e+00 1131.0
2 TraesCS1B01G228500 chr1B 79.476 687 102 34 5 674 581703198 581702534 7.480000e-123 451.0
3 TraesCS1B01G228500 chr1D 91.769 1713 92 15 793 2462 302889618 302887912 0.000000e+00 2337.0
4 TraesCS1B01G228500 chr1D 91.056 928 50 15 3647 4567 302887015 302886114 0.000000e+00 1223.0
5 TraesCS1B01G228500 chr1D 89.785 930 68 20 2608 3524 302887928 302887013 0.000000e+00 1166.0
6 TraesCS1B01G228500 chr1D 92.121 165 11 1 4739 4903 302886053 302885891 1.060000e-56 231.0
7 TraesCS1B01G228500 chr1D 75.081 309 51 21 40 337 6314056 6313763 2.400000e-23 121.0
8 TraesCS1B01G228500 chr1D 75.510 294 44 23 136 424 348809744 348810014 8.620000e-23 119.0
9 TraesCS1B01G228500 chr1D 95.000 40 2 0 4683 4722 302886091 302886052 4.100000e-06 63.9
10 TraesCS1B01G228500 chr1A 94.862 798 31 7 3648 4438 377500149 377499355 0.000000e+00 1238.0
11 TraesCS1B01G228500 chr1A 93.325 809 46 6 2604 3406 377501202 377500396 0.000000e+00 1188.0
12 TraesCS1B01G228500 chr1A 90.192 938 48 11 793 1703 377502763 377501843 0.000000e+00 1182.0
13 TraesCS1B01G228500 chr1A 94.092 677 34 6 1792 2466 377501850 377501178 0.000000e+00 1024.0
14 TraesCS1B01G228500 chr1A 90.530 264 17 4 4643 4903 377499301 377499043 4.700000e-90 342.0
15 TraesCS1B01G228500 chr1A 97.581 124 3 0 3529 3652 548441696 548441573 3.840000e-51 213.0
16 TraesCS1B01G228500 chr1A 94.118 136 5 3 3516 3649 588384771 588384905 2.310000e-48 204.0
17 TraesCS1B01G228500 chr1A 94.545 55 3 0 3403 3457 377500232 377500178 8.740000e-13 86.1
18 TraesCS1B01G228500 chr1A 76.389 144 24 8 267 408 20946017 20945882 8.810000e-08 69.4
19 TraesCS1B01G228500 chr2B 92.349 745 51 5 1 742 711136143 711135402 0.000000e+00 1055.0
20 TraesCS1B01G228500 chr2B 88.710 744 58 13 1 742 373907666 373908385 0.000000e+00 885.0
21 TraesCS1B01G228500 chr2B 97.076 171 2 2 2448 2616 720806514 720806683 8.030000e-73 285.0
22 TraesCS1B01G228500 chr2B 99.174 121 1 0 3529 3649 547962607 547962487 8.260000e-53 219.0
23 TraesCS1B01G228500 chr2B 92.254 142 10 1 3516 3657 492619168 492619028 2.990000e-47 200.0
24 TraesCS1B01G228500 chr3D 89.125 754 60 19 1 742 331402486 331403229 0.000000e+00 918.0
25 TraesCS1B01G228500 chr3D 81.609 435 56 21 3 424 331402406 331402829 6.080000e-89 339.0
26 TraesCS1B01G228500 chr3D 78.571 294 44 16 136 423 331402397 331402677 5.040000e-40 176.0
27 TraesCS1B01G228500 chr3D 75.627 279 52 14 120 395 51791045 51790780 1.850000e-24 124.0
28 TraesCS1B01G228500 chr3D 72.854 431 76 33 13 423 32505726 32505317 5.190000e-20 110.0
29 TraesCS1B01G228500 chr7B 90.723 636 55 4 1 634 522083305 522082672 0.000000e+00 845.0
30 TraesCS1B01G228500 chr7B 89.233 678 62 10 1 676 692396535 692395867 0.000000e+00 837.0
31 TraesCS1B01G228500 chr7B 98.718 156 0 2 2462 2617 104069190 104069037 4.830000e-70 276.0
32 TraesCS1B01G228500 chr6B 88.889 693 67 8 1 688 713806370 713805683 0.000000e+00 845.0
33 TraesCS1B01G228500 chr6B 89.147 516 33 5 3 517 423090201 423090694 5.390000e-174 621.0
34 TraesCS1B01G228500 chr6B 91.228 228 18 2 516 742 423097978 423098204 4.770000e-80 309.0
35 TraesCS1B01G228500 chr6B 98.160 163 3 0 2446 2608 308565610 308565772 8.030000e-73 285.0
36 TraesCS1B01G228500 chr6B 99.367 158 0 1 2458 2614 504878235 504878392 8.030000e-73 285.0
37 TraesCS1B01G228500 chr6B 98.750 160 0 2 2458 2616 225541667 225541509 2.890000e-72 283.0
38 TraesCS1B01G228500 chr6B 98.742 159 0 2 2458 2615 717967230 717967073 1.040000e-71 281.0
39 TraesCS1B01G228500 chr6B 98.361 122 2 0 3529 3650 716890350 716890471 1.070000e-51 215.0
40 TraesCS1B01G228500 chr6B 96.491 57 1 1 4565 4621 238140953 238140898 5.230000e-15 93.5
41 TraesCS1B01G228500 chr3B 87.110 706 49 11 1 705 773262602 773261938 0.000000e+00 761.0
42 TraesCS1B01G228500 chr3B 98.137 161 2 1 2458 2617 168268361 168268201 3.740000e-71 279.0
43 TraesCS1B01G228500 chr3B 94.776 134 5 2 3517 3649 520452934 520452802 1.790000e-49 207.0
44 TraesCS1B01G228500 chr2D 90.824 534 40 7 1 528 195708966 195709496 0.000000e+00 706.0
45 TraesCS1B01G228500 chr2D 82.989 435 59 14 14 441 195708876 195709302 3.580000e-101 379.0
46 TraesCS1B01G228500 chr2D 92.806 139 8 2 3512 3649 148059546 148059683 2.990000e-47 200.0
47 TraesCS1B01G228500 chr4D 81.600 750 107 22 1 735 418224181 418223448 4.230000e-165 592.0
48 TraesCS1B01G228500 chr4D 78.182 440 72 21 20 450 418224245 418223821 4.870000e-65 259.0
49 TraesCS1B01G228500 chr4D 78.738 301 44 18 154 450 418224290 418224006 3.010000e-42 183.0
50 TraesCS1B01G228500 chr4D 75.000 180 33 12 261 437 423411816 423411646 6.810000e-09 73.1
51 TraesCS1B01G228500 chr7D 80.507 749 114 24 3 735 488071189 488070457 3.340000e-151 545.0
52 TraesCS1B01G228500 chr7D 84.821 336 44 7 1 335 488071089 488070760 1.020000e-86 331.0
53 TraesCS1B01G228500 chr7D 96.721 61 1 1 4565 4625 311872886 311872945 3.120000e-17 100.0
54 TraesCS1B01G228500 chr7D 94.915 59 1 2 4565 4622 576330732 576330789 1.880000e-14 91.6
55 TraesCS1B01G228500 chr6A 99.359 156 0 1 2458 2613 262043912 262043758 1.040000e-71 281.0
56 TraesCS1B01G228500 chr6A 90.909 66 4 2 4565 4629 522420696 522420632 2.430000e-13 87.9
57 TraesCS1B01G228500 chr5B 100.000 151 0 0 2458 2608 548726934 548727084 3.740000e-71 279.0
58 TraesCS1B01G228500 chr5B 93.750 160 8 1 2451 2608 673766296 673766455 6.340000e-59 239.0
59 TraesCS1B01G228500 chr5D 96.875 160 3 1 2451 2608 533661411 533661570 2.910000e-67 267.0
60 TraesCS1B01G228500 chr5D 79.245 212 33 11 204 410 50190762 50190557 2.380000e-28 137.0
61 TraesCS1B01G228500 chr5D 76.384 271 46 15 162 424 50190866 50190606 3.980000e-26 130.0
62 TraesCS1B01G228500 chr4B 94.737 133 5 2 3529 3660 32817684 32817553 6.430000e-49 206.0
63 TraesCS1B01G228500 chr4B 96.364 55 2 0 4565 4619 143941314 143941260 1.880000e-14 91.6
64 TraesCS1B01G228500 chr4B 91.045 67 5 1 4565 4631 461690483 461690548 6.760000e-14 89.8
65 TraesCS1B01G228500 chr3A 90.604 149 11 3 3501 3649 632274387 632274242 1.390000e-45 195.0
66 TraesCS1B01G228500 chr3A 88.889 54 3 2 658 711 746211244 746211294 4.100000e-06 63.9
67 TraesCS1B01G228500 chr7A 96.429 56 1 1 4565 4620 223532934 223532988 1.880000e-14 91.6
68 TraesCS1B01G228500 chr6D 96.429 56 1 1 4561 4615 78275589 78275644 1.880000e-14 91.6
69 TraesCS1B01G228500 chr4A 98.077 52 1 0 4565 4616 688239282 688239333 1.880000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G228500 chr1B 409677016 409681918 4902 True 9055.000000 9055 100.000000 1 4903 1 chr1B.!!$R1 4902
1 TraesCS1B01G228500 chr1B 28546479 28547192 713 False 1131.000000 1131 95.245000 1 714 1 chr1B.!!$F1 713
2 TraesCS1B01G228500 chr1B 581702534 581703198 664 True 451.000000 451 79.476000 5 674 1 chr1B.!!$R2 669
3 TraesCS1B01G228500 chr1D 302885891 302889618 3727 True 1004.180000 2337 91.946200 793 4903 5 chr1D.!!$R2 4110
4 TraesCS1B01G228500 chr1A 377499043 377502763 3720 True 843.350000 1238 92.924333 793 4903 6 chr1A.!!$R3 4110
5 TraesCS1B01G228500 chr2B 711135402 711136143 741 True 1055.000000 1055 92.349000 1 742 1 chr2B.!!$R3 741
6 TraesCS1B01G228500 chr2B 373907666 373908385 719 False 885.000000 885 88.710000 1 742 1 chr2B.!!$F1 741
7 TraesCS1B01G228500 chr3D 331402397 331403229 832 False 477.666667 918 83.101667 1 742 3 chr3D.!!$F1 741
8 TraesCS1B01G228500 chr7B 522082672 522083305 633 True 845.000000 845 90.723000 1 634 1 chr7B.!!$R2 633
9 TraesCS1B01G228500 chr7B 692395867 692396535 668 True 837.000000 837 89.233000 1 676 1 chr7B.!!$R3 675
10 TraesCS1B01G228500 chr6B 713805683 713806370 687 True 845.000000 845 88.889000 1 688 1 chr6B.!!$R3 687
11 TraesCS1B01G228500 chr3B 773261938 773262602 664 True 761.000000 761 87.110000 1 705 1 chr3B.!!$R3 704
12 TraesCS1B01G228500 chr2D 195708876 195709496 620 False 542.500000 706 86.906500 1 528 2 chr2D.!!$F2 527
13 TraesCS1B01G228500 chr4D 418223448 418224290 842 True 344.666667 592 79.506667 1 735 3 chr4D.!!$R2 734
14 TraesCS1B01G228500 chr7D 488070457 488071189 732 True 438.000000 545 82.664000 1 735 2 chr7D.!!$R1 734


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
762 1161 0.042131 TTAGGAGGGGAGCTTTCCGA 59.958 55.0 0.00 0.0 36.11 4.55 F
2481 2938 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.0 0.00 0.0 34.10 3.16 F
2526 2983 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.0 7.38 0.0 33.79 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2507 2964 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.0 8.73 0.0 40.08 4.58 R
3641 4277 0.044855 AATCCCAGGTGCTACTCCCT 59.955 55.0 0.00 0.0 0.00 4.20 R
4283 4926 0.179000 CCGGATCTGGCTAGCAAGTT 59.821 55.0 18.82 10.8 0.00 2.66 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 247 9.345517 TCAAATTTGAAGAAATGTTCATCGATC 57.654 29.630 18.45 0.00 36.34 3.69
427 806 8.540492 TCGAATTTTATAAGAAGTTCATCGAGC 58.460 33.333 5.50 0.00 0.00 5.03
562 948 2.189521 GAATCGGTGGCGGGATGT 59.810 61.111 0.00 0.00 0.00 3.06
742 1141 1.153449 CGCCGAATAGGAACCAGCA 60.153 57.895 0.00 0.00 45.00 4.41
743 1142 0.532862 CGCCGAATAGGAACCAGCAT 60.533 55.000 0.00 0.00 45.00 3.79
744 1143 1.680338 GCCGAATAGGAACCAGCATT 58.320 50.000 0.00 0.00 45.00 3.56
745 1144 2.805295 CGCCGAATAGGAACCAGCATTA 60.805 50.000 0.00 0.00 45.00 1.90
746 1145 2.808543 GCCGAATAGGAACCAGCATTAG 59.191 50.000 0.00 0.00 45.00 1.73
747 1146 3.403038 CCGAATAGGAACCAGCATTAGG 58.597 50.000 0.00 0.00 45.00 2.69
748 1147 3.071023 CCGAATAGGAACCAGCATTAGGA 59.929 47.826 0.00 0.00 45.00 2.94
749 1148 4.310769 CGAATAGGAACCAGCATTAGGAG 58.689 47.826 0.00 0.00 0.00 3.69
750 1149 4.646572 GAATAGGAACCAGCATTAGGAGG 58.353 47.826 0.00 0.00 0.00 4.30
751 1150 1.216990 AGGAACCAGCATTAGGAGGG 58.783 55.000 0.00 0.00 0.00 4.30
752 1151 0.183731 GGAACCAGCATTAGGAGGGG 59.816 60.000 0.00 0.00 0.00 4.79
753 1152 1.213296 GAACCAGCATTAGGAGGGGA 58.787 55.000 0.00 0.00 0.00 4.81
754 1153 1.141858 GAACCAGCATTAGGAGGGGAG 59.858 57.143 0.00 0.00 0.00 4.30
755 1154 1.348775 ACCAGCATTAGGAGGGGAGC 61.349 60.000 0.00 0.00 0.00 4.70
756 1155 1.059006 CCAGCATTAGGAGGGGAGCT 61.059 60.000 0.00 0.00 0.00 4.09
757 1156 0.842635 CAGCATTAGGAGGGGAGCTT 59.157 55.000 0.00 0.00 0.00 3.74
758 1157 1.213926 CAGCATTAGGAGGGGAGCTTT 59.786 52.381 0.00 0.00 0.00 3.51
759 1158 1.492599 AGCATTAGGAGGGGAGCTTTC 59.507 52.381 0.00 0.00 0.00 2.62
760 1159 1.477740 GCATTAGGAGGGGAGCTTTCC 60.478 57.143 0.00 0.00 0.00 3.13
761 1160 1.132500 ATTAGGAGGGGAGCTTTCCG 58.868 55.000 0.00 0.00 36.11 4.30
762 1161 0.042131 TTAGGAGGGGAGCTTTCCGA 59.958 55.000 0.00 0.00 36.11 4.55
763 1162 0.042131 TAGGAGGGGAGCTTTCCGAA 59.958 55.000 0.00 0.00 36.11 4.30
764 1163 0.840722 AGGAGGGGAGCTTTCCGAAA 60.841 55.000 0.00 0.00 36.11 3.46
765 1164 0.256177 GGAGGGGAGCTTTCCGAAAT 59.744 55.000 0.00 0.00 0.00 2.17
766 1165 1.341089 GGAGGGGAGCTTTCCGAAATT 60.341 52.381 0.00 0.00 0.00 1.82
767 1166 2.447443 GAGGGGAGCTTTCCGAAATTT 58.553 47.619 0.00 0.00 0.00 1.82
768 1167 2.826128 GAGGGGAGCTTTCCGAAATTTT 59.174 45.455 0.00 0.00 0.00 1.82
769 1168 2.826128 AGGGGAGCTTTCCGAAATTTTC 59.174 45.455 0.00 0.00 0.00 2.29
770 1169 2.826128 GGGGAGCTTTCCGAAATTTTCT 59.174 45.455 7.50 0.00 0.00 2.52
771 1170 3.367395 GGGGAGCTTTCCGAAATTTTCTG 60.367 47.826 7.50 1.22 0.00 3.02
772 1171 3.506067 GGGAGCTTTCCGAAATTTTCTGA 59.494 43.478 7.50 3.61 0.00 3.27
773 1172 4.022329 GGGAGCTTTCCGAAATTTTCTGAA 60.022 41.667 10.75 10.75 32.20 3.02
774 1173 5.157067 GGAGCTTTCCGAAATTTTCTGAAG 58.843 41.667 13.42 11.39 34.97 3.02
775 1174 5.126396 AGCTTTCCGAAATTTTCTGAAGG 57.874 39.130 16.11 16.11 34.97 3.46
776 1175 4.827284 AGCTTTCCGAAATTTTCTGAAGGA 59.173 37.500 21.41 12.23 34.97 3.36
777 1176 5.301805 AGCTTTCCGAAATTTTCTGAAGGAA 59.698 36.000 21.41 16.11 34.97 3.36
778 1177 5.631096 GCTTTCCGAAATTTTCTGAAGGAAG 59.369 40.000 21.41 14.67 37.55 3.46
779 1178 6.515035 GCTTTCCGAAATTTTCTGAAGGAAGA 60.515 38.462 21.41 10.89 37.55 2.87
780 1179 6.952773 TTCCGAAATTTTCTGAAGGAAGAA 57.047 33.333 10.75 0.00 35.16 2.52
781 1180 6.313744 TCCGAAATTTTCTGAAGGAAGAAC 57.686 37.500 7.50 0.00 35.92 3.01
782 1181 6.062095 TCCGAAATTTTCTGAAGGAAGAACT 58.938 36.000 7.50 0.00 35.92 3.01
783 1182 6.017109 TCCGAAATTTTCTGAAGGAAGAACTG 60.017 38.462 7.50 0.00 35.92 3.16
784 1183 5.626955 CGAAATTTTCTGAAGGAAGAACTGC 59.373 40.000 7.50 0.00 35.92 4.40
785 1184 6.514048 CGAAATTTTCTGAAGGAAGAACTGCT 60.514 38.462 7.50 0.00 35.92 4.24
786 1185 5.702349 ATTTTCTGAAGGAAGAACTGCTG 57.298 39.130 0.00 0.00 35.92 4.41
787 1186 2.175878 TCTGAAGGAAGAACTGCTGC 57.824 50.000 0.00 0.00 0.00 5.25
788 1187 1.163554 CTGAAGGAAGAACTGCTGCC 58.836 55.000 0.00 0.00 43.55 4.85
789 1188 0.473755 TGAAGGAAGAACTGCTGCCA 59.526 50.000 0.00 0.00 45.98 4.92
790 1189 0.877743 GAAGGAAGAACTGCTGCCAC 59.122 55.000 0.00 0.00 45.98 5.01
791 1190 0.538287 AAGGAAGAACTGCTGCCACC 60.538 55.000 0.00 0.00 45.98 4.61
805 1204 1.076777 CCACCGGGCCATGAATCTT 60.077 57.895 6.32 0.00 0.00 2.40
809 1208 3.074412 CACCGGGCCATGAATCTTATAC 58.926 50.000 6.32 0.00 0.00 1.47
810 1209 2.979678 ACCGGGCCATGAATCTTATACT 59.020 45.455 6.32 0.00 0.00 2.12
841 1240 2.734346 ACGACGGCCCGTTAAACG 60.734 61.111 11.54 12.29 41.37 3.60
843 1242 2.309501 CGACGGCCCGTTAAACGTT 61.310 57.895 11.54 0.00 41.37 3.99
853 1252 2.990042 CGTTAAACGTTGGCGGAACCA 61.990 52.381 0.00 0.00 41.02 3.67
913 1312 3.684788 TGCGAAAGGAAAGCAGATAAGAC 59.315 43.478 0.00 0.00 35.81 3.01
963 1364 0.537371 CAACCGAGCAAAACCCTCCT 60.537 55.000 0.00 0.00 0.00 3.69
967 1368 1.545651 CCGAGCAAAACCCTCCTCTTT 60.546 52.381 0.00 0.00 0.00 2.52
1160 1583 1.671379 GCGACCCTTCCAAGGTGAC 60.671 63.158 4.63 0.00 44.98 3.67
1201 1624 1.993370 GTCGCGTCTGCTCAACTAATT 59.007 47.619 5.77 0.00 39.65 1.40
1206 1629 5.005394 TCGCGTCTGCTCAACTAATTATTTC 59.995 40.000 5.77 0.00 39.65 2.17
1210 1633 6.984474 CGTCTGCTCAACTAATTATTTCCCTA 59.016 38.462 0.00 0.00 0.00 3.53
1212 1635 7.988028 GTCTGCTCAACTAATTATTTCCCTACT 59.012 37.037 0.00 0.00 0.00 2.57
1215 1638 8.325787 TGCTCAACTAATTATTTCCCTACTTGA 58.674 33.333 0.00 0.00 0.00 3.02
1260 1683 1.152989 CGCTCTGCTGATTCTCCTGC 61.153 60.000 0.00 0.00 0.00 4.85
1264 1687 1.755959 TCTGCTGATTCTCCTGCTCTC 59.244 52.381 0.00 0.00 33.03 3.20
1311 1734 4.052229 CGGGTGCTCGTCCGTCTT 62.052 66.667 0.00 0.00 41.23 3.01
1439 1862 0.323360 TATTTCCCACCTGCAGTGCC 60.323 55.000 13.72 0.00 45.83 5.01
1441 1864 2.981914 TTTCCCACCTGCAGTGCCTG 62.982 60.000 13.72 6.02 45.83 4.85
1456 1879 3.381908 AGTGCCTGTAGATTTCTAGTCGG 59.618 47.826 0.00 0.00 0.00 4.79
1480 1903 2.841442 ATCCTTCCAACTATAGCGCC 57.159 50.000 2.29 0.00 0.00 6.53
1487 1910 1.876714 AACTATAGCGCCGCACACG 60.877 57.895 13.36 0.00 39.67 4.49
1536 1965 5.171339 AGAAAGCTGTCATAAGTGGTCAT 57.829 39.130 6.68 0.00 0.00 3.06
1538 1967 3.988976 AGCTGTCATAAGTGGTCATGT 57.011 42.857 0.00 0.00 0.00 3.21
1548 1977 8.391106 GTCATAAGTGGTCATGTTTTGAGATAC 58.609 37.037 0.00 0.00 34.17 2.24
1566 1995 6.876789 TGAGATACTGAAACGCTAAATTTGGA 59.123 34.615 5.63 0.00 0.00 3.53
1576 2005 3.938963 CGCTAAATTTGGACTCCAGCTAA 59.061 43.478 5.63 0.00 33.81 3.09
1607 2036 3.639561 ACAATTTGTAGTGTTTCCCCACC 59.360 43.478 0.00 0.00 35.93 4.61
1655 2084 4.588951 AGCTGGAACTTGGATCGTATATGA 59.411 41.667 0.00 0.00 0.00 2.15
1671 2100 8.953368 TCGTATATGAACGGAGCTTATATAGA 57.047 34.615 0.00 0.00 43.05 1.98
1707 2136 4.156455 ACCTTATGGTGCTATGAAGGTG 57.844 45.455 3.88 0.00 46.35 4.00
1773 2223 5.105269 TGCTGCATTTAATTCCACATGTGAT 60.105 36.000 27.46 10.81 0.00 3.06
1787 2237 7.249858 TCCACATGTGATAAAATTCGTTGATG 58.750 34.615 27.46 4.04 0.00 3.07
1860 2311 2.995258 TCGGGTGTTTCGTAATGCTTAC 59.005 45.455 0.00 0.00 0.00 2.34
1863 2314 3.499157 GGGTGTTTCGTAATGCTTACACA 59.501 43.478 0.00 0.90 38.04 3.72
2004 2455 4.160439 TGCCTAGGCTATATCACTGCATAC 59.840 45.833 33.07 0.00 42.51 2.39
2059 2510 9.865321 ATGTTACGAGTAAAGTTTATAGCAGAA 57.135 29.630 0.00 0.00 0.00 3.02
2183 2636 3.916359 TTTGATGGGCGAGGTAACATA 57.084 42.857 0.00 0.00 41.41 2.29
2184 2637 2.902705 TGATGGGCGAGGTAACATAC 57.097 50.000 0.00 0.00 41.41 2.39
2222 2676 6.237969 GCTTCTGCTGTAGTAACTTTATCAGC 60.238 42.308 7.83 7.83 45.39 4.26
2250 2706 4.754114 ACTCACAATCTTTCTCTGTTGAGC 59.246 41.667 0.00 0.00 40.03 4.26
2310 2766 1.163554 CTGGAAAGAAGGTGAGCAGC 58.836 55.000 0.00 0.00 0.00 5.25
2320 2776 6.476378 AAGAAGGTGAGCAGCTTATTTCTTA 58.524 36.000 19.53 0.00 44.71 2.10
2325 2781 8.127150 AGGTGAGCAGCTTATTTCTTATTTTT 57.873 30.769 0.00 0.00 35.28 1.94
2350 2806 0.461548 GGCCTCCTTTTAATGCCTGC 59.538 55.000 0.00 0.00 39.05 4.85
2365 2821 0.316204 CCTGCCCAAGCTTTTCACAG 59.684 55.000 0.00 2.33 40.80 3.66
2392 2848 2.945984 CACCGAATGCTTGCACGT 59.054 55.556 0.00 0.00 0.00 4.49
2418 2875 2.276732 AGTGTATGCTTGCACCTTGT 57.723 45.000 15.59 0.00 39.07 3.16
2437 2894 6.493458 ACCTTGTTCCTTGTGCTGTTAATATT 59.507 34.615 0.00 0.00 0.00 1.28
2463 2920 6.538021 GCATCTATATAATCTTCCTGCAGTGG 59.462 42.308 13.81 0.00 0.00 4.00
2466 2923 5.894298 ATATAATCTTCCTGCAGTGGTGA 57.106 39.130 13.81 5.73 0.00 4.02
2467 2924 2.957402 AATCTTCCTGCAGTGGTGAA 57.043 45.000 13.81 7.91 0.00 3.18
2468 2925 2.486472 ATCTTCCTGCAGTGGTGAAG 57.514 50.000 18.92 18.92 36.42 3.02
2469 2926 1.131638 TCTTCCTGCAGTGGTGAAGT 58.868 50.000 22.09 0.00 36.47 3.01
2470 2927 1.070758 TCTTCCTGCAGTGGTGAAGTC 59.929 52.381 22.09 0.00 36.47 3.01
2471 2928 0.108585 TTCCTGCAGTGGTGAAGTCC 59.891 55.000 13.81 0.00 0.00 3.85
2472 2929 0.764369 TCCTGCAGTGGTGAAGTCCT 60.764 55.000 13.81 0.00 0.00 3.85
2473 2930 0.321122 CCTGCAGTGGTGAAGTCCTC 60.321 60.000 13.81 0.00 0.00 3.71
2474 2931 0.321122 CTGCAGTGGTGAAGTCCTCC 60.321 60.000 5.25 0.00 0.00 4.30
2475 2932 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2476 2933 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
2477 2934 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
2478 2935 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
2479 2936 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
2480 2937 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
2481 2938 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
2482 2939 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
2483 2940 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
2484 2941 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
2485 2942 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
2486 2943 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
2487 2944 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
2488 2945 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
2489 2946 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
2490 2947 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
2491 2948 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
2492 2949 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
2493 2950 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
2494 2951 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
2495 2952 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
2496 2953 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2497 2954 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
2498 2955 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
2499 2956 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
2500 2957 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
2501 2958 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
2502 2959 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
2503 2960 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
2504 2961 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
2505 2962 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
2516 2973 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
2517 2974 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2518 2975 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2519 2976 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2520 2977 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2521 2978 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2522 2979 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2523 2980 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2524 2981 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2525 2982 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2526 2983 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2527 2984 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2528 2985 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2529 2986 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2539 2996 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2540 2997 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2541 2998 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2542 2999 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2543 3000 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2544 3001 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2545 3002 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2546 3003 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2547 3004 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2548 3005 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2549 3006 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2550 3007 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2551 3008 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2552 3009 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2553 3010 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2554 3011 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2555 3012 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2556 3013 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2557 3014 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2558 3015 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2559 3016 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2560 3017 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2561 3018 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2562 3019 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2563 3020 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2564 3021 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2565 3022 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2566 3023 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2567 3024 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2568 3025 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2569 3026 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2570 3027 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2571 3028 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2573 3030 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2574 3031 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2575 3032 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2576 3033 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2577 3034 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2578 3035 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2579 3036 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2586 3043 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2587 3044 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2588 3045 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2589 3046 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2590 3047 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2591 3048 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2592 3049 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2593 3050 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2594 3051 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2595 3052 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2596 3053 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2597 3054 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2598 3055 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2599 3056 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2600 3057 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2601 3058 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2602 3059 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2603 3060 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2604 3061 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2605 3062 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2606 3063 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2607 3064 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2608 3065 1.656587 ATGCACTGGGTCTGTCCTTA 58.343 50.000 0.00 0.00 36.25 2.69
2609 3066 1.656587 TGCACTGGGTCTGTCCTTAT 58.343 50.000 0.00 0.00 36.25 1.73
2610 3067 2.827755 TGCACTGGGTCTGTCCTTATA 58.172 47.619 0.00 0.00 36.25 0.98
2611 3068 3.178046 TGCACTGGGTCTGTCCTTATAA 58.822 45.455 0.00 0.00 36.25 0.98
2612 3069 3.780294 TGCACTGGGTCTGTCCTTATAAT 59.220 43.478 0.00 0.00 36.25 1.28
2613 3070 4.141711 TGCACTGGGTCTGTCCTTATAATC 60.142 45.833 0.00 0.00 36.25 1.75
2614 3071 4.101741 GCACTGGGTCTGTCCTTATAATCT 59.898 45.833 0.00 0.00 36.25 2.40
2615 3072 5.396884 GCACTGGGTCTGTCCTTATAATCTT 60.397 44.000 0.00 0.00 36.25 2.40
2616 3073 6.284459 CACTGGGTCTGTCCTTATAATCTTC 58.716 44.000 0.00 0.00 36.25 2.87
2617 3074 5.367060 ACTGGGTCTGTCCTTATAATCTTCC 59.633 44.000 0.00 0.00 36.25 3.46
2618 3075 5.538877 TGGGTCTGTCCTTATAATCTTCCT 58.461 41.667 0.00 0.00 36.25 3.36
2619 3076 5.366768 TGGGTCTGTCCTTATAATCTTCCTG 59.633 44.000 0.00 0.00 36.25 3.86
2620 3077 5.301555 GGTCTGTCCTTATAATCTTCCTGC 58.698 45.833 0.00 0.00 0.00 4.85
2621 3078 5.163301 GGTCTGTCCTTATAATCTTCCTGCA 60.163 44.000 0.00 0.00 0.00 4.41
2622 3079 5.988561 GTCTGTCCTTATAATCTTCCTGCAG 59.011 44.000 6.78 6.78 0.00 4.41
2623 3080 5.663106 TCTGTCCTTATAATCTTCCTGCAGT 59.337 40.000 13.81 0.00 0.00 4.40
2624 3081 5.674525 TGTCCTTATAATCTTCCTGCAGTG 58.325 41.667 13.81 4.33 0.00 3.66
2625 3082 4.513318 GTCCTTATAATCTTCCTGCAGTGC 59.487 45.833 13.81 8.58 0.00 4.40
2626 3083 4.410228 TCCTTATAATCTTCCTGCAGTGCT 59.590 41.667 17.60 0.00 0.00 4.40
2627 3084 4.754114 CCTTATAATCTTCCTGCAGTGCTC 59.246 45.833 17.60 0.00 0.00 4.26
2628 3085 2.698855 TAATCTTCCTGCAGTGCTCC 57.301 50.000 17.60 0.00 0.00 4.70
2629 3086 0.990374 AATCTTCCTGCAGTGCTCCT 59.010 50.000 17.60 0.00 0.00 3.69
2630 3087 0.990374 ATCTTCCTGCAGTGCTCCTT 59.010 50.000 17.60 0.00 0.00 3.36
2631 3088 0.767375 TCTTCCTGCAGTGCTCCTTT 59.233 50.000 17.60 0.00 0.00 3.11
2632 3089 0.879765 CTTCCTGCAGTGCTCCTTTG 59.120 55.000 17.60 0.00 0.00 2.77
2641 3098 2.229784 CAGTGCTCCTTTGTTGGATTCC 59.770 50.000 0.00 0.00 35.30 3.01
2664 3121 8.682128 TCCGAAAGTATGTTAATGAAAATTGC 57.318 30.769 0.00 0.00 0.00 3.56
2692 3149 6.656632 TGGGATGTTAGTGTTGCATAAAAA 57.343 33.333 0.00 0.00 0.00 1.94
2740 3197 3.391965 TGCTTGCTTTTGCCTGTATTTG 58.608 40.909 0.00 0.00 46.87 2.32
2782 3243 9.896645 ATGTGACACACTTCATCTATAAGAAAT 57.103 29.630 11.22 0.00 35.11 2.17
2802 3263 4.607293 ATTGCGCTCCATGTCTAGATAA 57.393 40.909 9.73 0.00 0.00 1.75
2831 3293 0.523519 GTGGCCAAAAGTGAGCTAGC 59.476 55.000 7.24 6.62 0.00 3.42
2833 3295 0.955919 GGCCAAAAGTGAGCTAGCGT 60.956 55.000 9.55 0.00 0.00 5.07
2969 3434 3.004171 TGTTCAACACCATATACCGTGC 58.996 45.455 0.00 0.00 33.09 5.34
2971 3436 3.336138 TCAACACCATATACCGTGCAA 57.664 42.857 0.00 0.00 33.09 4.08
2979 3444 5.525745 CACCATATACCGTGCAAAATAGTCA 59.474 40.000 0.00 0.00 0.00 3.41
3022 3488 1.070445 CTCCATGATCAGTGAGGCCTC 59.930 57.143 26.78 26.78 0.00 4.70
3066 3532 9.574458 GAGAAATTAGCTTTCCTTTTATTGACC 57.426 33.333 0.00 0.00 43.66 4.02
3217 3686 1.136305 CAGGGATGCTTTGAATGCCAG 59.864 52.381 0.39 0.00 37.96 4.85
3327 3796 5.933463 GCTTTTATCCTCCTCTGAGATGATG 59.067 44.000 6.17 0.00 41.42 3.07
3340 3809 7.224362 CCTCTGAGATGATGTGAAAACAGTATC 59.776 40.741 6.17 0.00 0.00 2.24
3370 3839 2.977914 TCTGATAACACCTCTGCTTGC 58.022 47.619 0.00 0.00 0.00 4.01
3449 4084 1.126113 CTTGCCACGCGTTACTTACAG 59.874 52.381 10.22 0.00 0.00 2.74
3497 4132 9.938280 GGCTAACATAGGTGTTTCATGTATATA 57.062 33.333 0.00 0.00 46.07 0.86
3536 4172 4.825546 AAGTATGTATGTACTCCGTCCG 57.174 45.455 0.00 0.00 33.92 4.79
3537 4173 3.144506 AGTATGTATGTACTCCGTCCGG 58.855 50.000 0.00 0.00 28.99 5.14
3538 4174 2.353357 ATGTATGTACTCCGTCCGGA 57.647 50.000 0.00 0.00 42.90 5.14
3539 4175 2.127271 TGTATGTACTCCGTCCGGAA 57.873 50.000 5.23 0.00 44.66 4.30
3540 4176 2.445427 TGTATGTACTCCGTCCGGAAA 58.555 47.619 5.23 0.00 44.66 3.13
3541 4177 3.025978 TGTATGTACTCCGTCCGGAAAT 58.974 45.455 5.23 3.83 44.66 2.17
3542 4178 4.206375 TGTATGTACTCCGTCCGGAAATA 58.794 43.478 5.23 2.87 44.66 1.40
3543 4179 3.722728 ATGTACTCCGTCCGGAAATAC 57.277 47.619 5.23 14.34 44.66 1.89
3544 4180 2.726821 TGTACTCCGTCCGGAAATACT 58.273 47.619 21.24 0.00 44.66 2.12
3545 4181 3.091545 TGTACTCCGTCCGGAAATACTT 58.908 45.455 21.24 0.00 44.66 2.24
3546 4182 2.667473 ACTCCGTCCGGAAATACTTG 57.333 50.000 5.23 0.00 44.66 3.16
3547 4183 1.897802 ACTCCGTCCGGAAATACTTGT 59.102 47.619 5.23 0.00 44.66 3.16
3548 4184 2.094338 ACTCCGTCCGGAAATACTTGTC 60.094 50.000 5.23 0.00 44.66 3.18
3549 4185 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3550 4186 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3551 4187 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3552 4188 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3553 4189 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3554 4190 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3555 4191 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3556 4192 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3557 4193 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3558 4194 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3559 4195 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
3560 4196 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
3568 4204 9.918630 ACTTGTCATCAAAATGAATAAAAGAGG 57.081 29.630 0.00 0.00 43.42 3.69
3613 4249 8.794335 AGTTCTAGATACATTCCTTTTTGTCC 57.206 34.615 0.00 0.00 0.00 4.02
3614 4250 8.383175 AGTTCTAGATACATTCCTTTTTGTCCA 58.617 33.333 0.00 0.00 0.00 4.02
3615 4251 9.178758 GTTCTAGATACATTCCTTTTTGTCCAT 57.821 33.333 0.00 0.00 0.00 3.41
3616 4252 9.753674 TTCTAGATACATTCCTTTTTGTCCATT 57.246 29.630 0.00 0.00 0.00 3.16
3617 4253 9.753674 TCTAGATACATTCCTTTTTGTCCATTT 57.246 29.630 0.00 0.00 0.00 2.32
3620 4256 8.869109 AGATACATTCCTTTTTGTCCATTTTGA 58.131 29.630 0.00 0.00 0.00 2.69
3621 4257 9.657419 GATACATTCCTTTTTGTCCATTTTGAT 57.343 29.630 0.00 0.00 0.00 2.57
3622 4258 7.733402 ACATTCCTTTTTGTCCATTTTGATG 57.267 32.000 0.00 0.00 0.00 3.07
3623 4259 7.507829 ACATTCCTTTTTGTCCATTTTGATGA 58.492 30.769 0.00 0.00 0.00 2.92
3624 4260 7.442062 ACATTCCTTTTTGTCCATTTTGATGAC 59.558 33.333 0.00 0.00 0.00 3.06
3625 4261 6.477053 TCCTTTTTGTCCATTTTGATGACA 57.523 33.333 0.00 0.00 0.00 3.58
3626 4262 6.882656 TCCTTTTTGTCCATTTTGATGACAA 58.117 32.000 0.00 0.00 34.47 3.18
3627 4263 6.985645 TCCTTTTTGTCCATTTTGATGACAAG 59.014 34.615 0.00 0.00 37.13 3.16
3628 4264 6.762661 CCTTTTTGTCCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.13 3.16
3629 4265 7.280652 CCTTTTTGTCCATTTTGATGACAAGTT 59.719 33.333 0.00 0.00 37.13 2.66
3630 4266 8.558973 TTTTTGTCCATTTTGATGACAAGTTT 57.441 26.923 0.00 0.00 37.13 2.66
3631 4267 8.558973 TTTTGTCCATTTTGATGACAAGTTTT 57.441 26.923 0.00 0.00 37.13 2.43
3632 4268 8.558973 TTTGTCCATTTTGATGACAAGTTTTT 57.441 26.923 0.00 0.00 37.13 1.94
3741 4377 1.284198 AGGTAAGCTAGTGTCTCCCGA 59.716 52.381 0.00 0.00 0.00 5.14
3778 4414 1.532794 TGGGTTTGTCATGGTGGCC 60.533 57.895 0.00 0.00 0.00 5.36
4011 4647 6.720309 TCTTTTGATGATCATGGGTTGAGTA 58.280 36.000 14.30 0.00 37.89 2.59
4028 4664 8.451748 GGGTTGAGTAATTGATGAGTTTTAGAC 58.548 37.037 0.00 0.00 0.00 2.59
4114 4752 5.066505 GTGCATTTTCCCTCTAGTAATGGTG 59.933 44.000 0.00 0.00 0.00 4.17
4138 4776 2.420022 CTGAAACCCTGACCTTAATGCG 59.580 50.000 0.00 0.00 0.00 4.73
4185 4828 2.080693 TGCGTTGCTGGTAATACCTTG 58.919 47.619 11.16 4.99 39.58 3.61
4259 4902 1.671979 CTAAGCTAGCTTGCCATGCA 58.328 50.000 34.98 15.72 37.47 3.96
4283 4926 3.998913 TGGCTCATGGATTGACTTGTA 57.001 42.857 0.00 0.00 0.00 2.41
4311 4954 1.092345 GCCAGATCCGGAAGTTCAGC 61.092 60.000 9.01 5.51 0.00 4.26
4328 4974 2.664185 CGGGCTGAGGCATCATCG 60.664 66.667 8.68 2.98 40.87 3.84
4331 4977 1.445095 GGCTGAGGCATCATCGTCT 59.555 57.895 0.00 0.00 40.87 4.18
4351 4997 1.570967 CACATGACCGTGTGCAGTG 59.429 57.895 9.14 0.00 42.51 3.66
4372 5018 2.288186 GCAGATGTACTCACGATCTCGA 59.712 50.000 6.60 0.00 43.02 4.04
4401 5047 6.007703 CCTAAGGACTGGAATGTTTGGTTAA 58.992 40.000 0.00 0.00 0.00 2.01
4418 5064 3.193479 GGTTAAGCTTTAGGCATGTTGCT 59.807 43.478 3.20 0.00 44.28 3.91
4442 5088 1.019673 AATTCACGCAGCTAGCCATG 58.980 50.000 12.13 5.23 41.38 3.66
4448 5096 0.319383 CGCAGCTAGCCATGTAGAGG 60.319 60.000 12.13 0.00 41.38 3.69
4452 5100 3.491342 CAGCTAGCCATGTAGAGGACTA 58.509 50.000 12.13 0.00 0.00 2.59
4468 5116 1.875813 CTAGCGAGCCGAGCAAGTG 60.876 63.158 0.00 0.00 37.01 3.16
4477 5125 1.337823 GCCGAGCAAGTGGTAGAAAGA 60.338 52.381 0.00 0.00 0.00 2.52
4478 5126 2.338500 CCGAGCAAGTGGTAGAAAGAC 58.662 52.381 0.00 0.00 0.00 3.01
4479 5127 2.028930 CCGAGCAAGTGGTAGAAAGACT 60.029 50.000 0.00 0.00 0.00 3.24
4480 5128 2.989840 CGAGCAAGTGGTAGAAAGACTG 59.010 50.000 0.00 0.00 0.00 3.51
4482 5130 2.104792 AGCAAGTGGTAGAAAGACTGCA 59.895 45.455 0.00 0.00 32.90 4.41
4483 5131 2.224314 GCAAGTGGTAGAAAGACTGCAC 59.776 50.000 0.00 0.00 32.90 4.57
4486 5134 0.320374 TGGTAGAAAGACTGCACCCG 59.680 55.000 0.00 0.00 32.90 5.28
4487 5135 0.391263 GGTAGAAAGACTGCACCCGG 60.391 60.000 0.00 0.00 32.90 5.73
4488 5136 1.019805 GTAGAAAGACTGCACCCGGC 61.020 60.000 0.00 0.00 45.13 6.13
4489 5137 1.192146 TAGAAAGACTGCACCCGGCT 61.192 55.000 0.00 0.00 45.15 5.52
4504 5152 1.243342 CGGCTGAAAACATGGCAGGA 61.243 55.000 5.99 0.00 0.00 3.86
4505 5153 0.529378 GGCTGAAAACATGGCAGGAG 59.471 55.000 5.99 0.00 0.00 3.69
4567 5215 2.304761 TGGATTTCGGCAGGAAACTACT 59.695 45.455 4.53 0.00 46.81 2.57
4568 5216 3.516300 TGGATTTCGGCAGGAAACTACTA 59.484 43.478 4.53 0.00 46.81 1.82
4569 5217 4.020039 TGGATTTCGGCAGGAAACTACTAA 60.020 41.667 4.53 0.00 46.81 2.24
4570 5218 4.939439 GGATTTCGGCAGGAAACTACTAAA 59.061 41.667 4.53 0.00 46.81 1.85
4571 5219 5.064834 GGATTTCGGCAGGAAACTACTAAAG 59.935 44.000 4.53 0.00 46.81 1.85
4572 5220 4.612264 TTCGGCAGGAAACTACTAAAGT 57.388 40.909 0.00 0.00 40.21 2.66
4604 5252 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
4605 5253 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
4606 5254 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
4607 5255 5.989477 TGAGTCATCTATTTTGGAACGGAT 58.011 37.500 0.00 0.00 0.00 4.18
4608 5256 5.817296 TGAGTCATCTATTTTGGAACGGATG 59.183 40.000 0.00 0.00 32.78 3.51
4609 5257 5.126067 AGTCATCTATTTTGGAACGGATGG 58.874 41.667 0.00 0.00 32.58 3.51
4616 5264 3.604875 TTTGGAACGGATGGAGTAGTC 57.395 47.619 0.00 0.00 0.00 2.59
4622 5270 4.341520 GGAACGGATGGAGTAGTCACTTAT 59.658 45.833 0.00 0.00 34.21 1.73
4625 5273 4.954202 ACGGATGGAGTAGTCACTTATCAA 59.046 41.667 0.00 0.00 34.21 2.57
4630 5278 5.084519 TGGAGTAGTCACTTATCAACCACT 58.915 41.667 0.00 0.00 34.21 4.00
4632 5280 5.394333 GGAGTAGTCACTTATCAACCACTCC 60.394 48.000 3.83 3.83 41.83 3.85
4633 5281 3.983044 AGTCACTTATCAACCACTCCC 57.017 47.619 0.00 0.00 0.00 4.30
4634 5282 3.248024 AGTCACTTATCAACCACTCCCA 58.752 45.455 0.00 0.00 0.00 4.37
4635 5283 3.261897 AGTCACTTATCAACCACTCCCAG 59.738 47.826 0.00 0.00 0.00 4.45
4636 5284 2.027192 TCACTTATCAACCACTCCCAGC 60.027 50.000 0.00 0.00 0.00 4.85
4637 5285 1.985159 ACTTATCAACCACTCCCAGCA 59.015 47.619 0.00 0.00 0.00 4.41
4638 5286 2.375174 ACTTATCAACCACTCCCAGCAA 59.625 45.455 0.00 0.00 0.00 3.91
4639 5287 2.489938 TATCAACCACTCCCAGCAAC 57.510 50.000 0.00 0.00 0.00 4.17
4640 5288 0.251341 ATCAACCACTCCCAGCAACC 60.251 55.000 0.00 0.00 0.00 3.77
4641 5289 1.152777 CAACCACTCCCAGCAACCA 60.153 57.895 0.00 0.00 0.00 3.67
4642 5290 1.151450 AACCACTCCCAGCAACCAG 59.849 57.895 0.00 0.00 0.00 4.00
4643 5291 2.674380 CCACTCCCAGCAACCAGC 60.674 66.667 0.00 0.00 46.19 4.85
4660 5308 5.705609 ACCAGCGAAAATCAAATTACAGT 57.294 34.783 0.00 0.00 0.00 3.55
4664 5312 5.281376 CAGCGAAAATCAAATTACAGTGTCG 59.719 40.000 0.00 0.00 0.00 4.35
4722 5372 3.313012 TCCAAACGTGGTCTCACATAG 57.687 47.619 0.00 0.00 46.11 2.23
4723 5373 2.631062 TCCAAACGTGGTCTCACATAGT 59.369 45.455 0.00 0.00 46.11 2.12
4724 5374 3.827876 TCCAAACGTGGTCTCACATAGTA 59.172 43.478 0.00 0.00 46.11 1.82
4737 5387 7.169982 GGTCTCACATAGTACATCATAGTTTGC 59.830 40.741 0.00 0.00 0.00 3.68
4739 5389 9.131791 TCTCACATAGTACATCATAGTTTGCTA 57.868 33.333 0.00 0.00 0.00 3.49
4838 5488 4.690748 CGAACTGATCAAGCCTTAACTCAA 59.309 41.667 0.00 0.00 0.00 3.02
4839 5489 5.352569 CGAACTGATCAAGCCTTAACTCAAT 59.647 40.000 0.00 0.00 0.00 2.57
4844 5494 5.419788 TGATCAAGCCTTAACTCAATGCAAT 59.580 36.000 0.00 0.00 30.77 3.56
4871 5521 4.769688 TGCAGTGACAAATATACAGGGAG 58.230 43.478 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
306 682 8.876275 TCTTCAAATTTGATGAACTTTTCTGG 57.124 30.769 26.09 0.70 38.10 3.86
503 887 9.094578 CATCTCTTCCTTCTATTATTCCCTACA 57.905 37.037 0.00 0.00 0.00 2.74
562 948 5.163834 CCGCCTAAAATTAGTTCGCACTTAA 60.164 40.000 0.00 0.00 34.06 1.85
636 1034 5.128499 CCCATCTGCTCTTTTCTCTCTTCTA 59.872 44.000 0.00 0.00 0.00 2.10
742 1141 1.132500 CGGAAAGCTCCCCTCCTAAT 58.868 55.000 0.00 0.00 38.71 1.73
743 1142 0.042131 TCGGAAAGCTCCCCTCCTAA 59.958 55.000 0.00 0.00 38.71 2.69
744 1143 0.042131 TTCGGAAAGCTCCCCTCCTA 59.958 55.000 0.00 0.00 38.71 2.94
745 1144 0.840722 TTTCGGAAAGCTCCCCTCCT 60.841 55.000 0.00 0.00 38.71 3.69
746 1145 0.256177 ATTTCGGAAAGCTCCCCTCC 59.744 55.000 9.30 0.00 38.71 4.30
747 1146 2.130272 AATTTCGGAAAGCTCCCCTC 57.870 50.000 9.30 0.00 38.71 4.30
748 1147 2.604912 AAATTTCGGAAAGCTCCCCT 57.395 45.000 9.30 0.00 38.71 4.79
749 1148 2.826128 AGAAAATTTCGGAAAGCTCCCC 59.174 45.455 9.30 0.00 38.71 4.81
750 1149 3.506067 TCAGAAAATTTCGGAAAGCTCCC 59.494 43.478 9.30 0.00 38.71 4.30
751 1150 4.766404 TCAGAAAATTTCGGAAAGCTCC 57.234 40.909 9.30 0.00 38.52 4.70
752 1151 5.048713 TCCTTCAGAAAATTTCGGAAAGCTC 60.049 40.000 18.73 5.45 41.94 4.09
753 1152 4.827284 TCCTTCAGAAAATTTCGGAAAGCT 59.173 37.500 18.73 1.50 41.94 3.74
754 1153 5.121221 TCCTTCAGAAAATTTCGGAAAGC 57.879 39.130 18.73 0.00 41.94 3.51
755 1154 6.970484 TCTTCCTTCAGAAAATTTCGGAAAG 58.030 36.000 18.73 14.26 41.94 2.62
756 1155 6.952773 TCTTCCTTCAGAAAATTTCGGAAA 57.047 33.333 18.73 5.52 41.94 3.13
757 1156 6.546034 AGTTCTTCCTTCAGAAAATTTCGGAA 59.454 34.615 17.58 17.58 40.65 4.30
758 1157 6.017109 CAGTTCTTCCTTCAGAAAATTTCGGA 60.017 38.462 4.51 4.51 34.50 4.55
759 1158 6.145535 CAGTTCTTCCTTCAGAAAATTTCGG 58.854 40.000 0.00 0.00 34.50 4.30
760 1159 5.626955 GCAGTTCTTCCTTCAGAAAATTTCG 59.373 40.000 0.00 0.00 34.50 3.46
761 1160 6.640092 CAGCAGTTCTTCCTTCAGAAAATTTC 59.360 38.462 0.00 0.00 34.50 2.17
762 1161 6.510536 CAGCAGTTCTTCCTTCAGAAAATTT 58.489 36.000 0.00 0.00 34.50 1.82
763 1162 5.508657 GCAGCAGTTCTTCCTTCAGAAAATT 60.509 40.000 0.00 0.00 34.50 1.82
764 1163 4.022503 GCAGCAGTTCTTCCTTCAGAAAAT 60.023 41.667 0.00 0.00 34.50 1.82
765 1164 3.316308 GCAGCAGTTCTTCCTTCAGAAAA 59.684 43.478 0.00 0.00 34.50 2.29
766 1165 2.880890 GCAGCAGTTCTTCCTTCAGAAA 59.119 45.455 0.00 0.00 34.50 2.52
767 1166 2.498167 GCAGCAGTTCTTCCTTCAGAA 58.502 47.619 0.00 0.00 0.00 3.02
768 1167 1.271054 GGCAGCAGTTCTTCCTTCAGA 60.271 52.381 0.00 0.00 0.00 3.27
769 1168 1.163554 GGCAGCAGTTCTTCCTTCAG 58.836 55.000 0.00 0.00 0.00 3.02
770 1169 0.473755 TGGCAGCAGTTCTTCCTTCA 59.526 50.000 0.00 0.00 0.00 3.02
771 1170 0.877743 GTGGCAGCAGTTCTTCCTTC 59.122 55.000 0.00 0.00 0.00 3.46
772 1171 0.538287 GGTGGCAGCAGTTCTTCCTT 60.538 55.000 12.58 0.00 0.00 3.36
773 1172 1.073897 GGTGGCAGCAGTTCTTCCT 59.926 57.895 12.58 0.00 0.00 3.36
774 1173 2.328099 CGGTGGCAGCAGTTCTTCC 61.328 63.158 17.80 0.00 0.00 3.46
775 1174 2.328099 CCGGTGGCAGCAGTTCTTC 61.328 63.158 17.80 0.00 0.00 2.87
776 1175 2.281761 CCGGTGGCAGCAGTTCTT 60.282 61.111 17.80 0.00 0.00 2.52
777 1176 4.335647 CCCGGTGGCAGCAGTTCT 62.336 66.667 17.80 0.00 0.00 3.01
787 1186 0.182537 TAAGATTCATGGCCCGGTGG 59.817 55.000 0.00 0.00 0.00 4.61
788 1187 2.276732 ATAAGATTCATGGCCCGGTG 57.723 50.000 0.00 0.00 0.00 4.94
789 1188 2.979678 AGTATAAGATTCATGGCCCGGT 59.020 45.455 0.00 0.00 0.00 5.28
790 1189 3.703001 AGTATAAGATTCATGGCCCGG 57.297 47.619 0.00 0.00 0.00 5.73
791 1190 4.935808 GGTTAGTATAAGATTCATGGCCCG 59.064 45.833 0.00 0.00 0.00 6.13
805 1204 7.639039 CCGTCGTGTTAAGTATGGTTAGTATA 58.361 38.462 0.00 0.00 0.00 1.47
809 1208 3.549070 GCCGTCGTGTTAAGTATGGTTAG 59.451 47.826 0.00 0.00 0.00 2.34
810 1209 3.510719 GCCGTCGTGTTAAGTATGGTTA 58.489 45.455 0.00 0.00 0.00 2.85
853 1252 3.610911 GGATGGGTTGTTTCTTCTCGAT 58.389 45.455 0.00 0.00 0.00 3.59
913 1312 3.237741 GGAGATGGGGGAGGCTCG 61.238 72.222 8.69 0.00 0.00 5.03
1260 1683 1.070134 TCCACCTGACAAAACGGAGAG 59.930 52.381 0.00 0.00 0.00 3.20
1264 1687 0.666374 GGTTCCACCTGACAAAACGG 59.334 55.000 0.00 0.00 34.73 4.44
1311 1734 1.218196 GGGACCTCTGGGATAGTCTCA 59.782 57.143 0.00 0.00 36.25 3.27
1383 1806 6.560064 AGCAAGCAAGCAATGGGAACAAAT 62.560 41.667 3.19 0.00 40.03 2.32
1397 1820 2.649034 CACCAGCCAGCAAGCAAG 59.351 61.111 0.55 0.00 34.23 4.01
1439 1862 7.087639 GGATTCATCCGACTAGAAATCTACAG 58.912 42.308 0.00 0.00 37.19 2.74
1480 1903 0.660005 CATTTGTTCACCCGTGTGCG 60.660 55.000 0.00 0.00 42.46 5.34
1487 1910 1.175983 TCGGTGCCATTTGTTCACCC 61.176 55.000 11.32 0.00 45.54 4.61
1500 1923 3.914364 CAGCTTTCTTACAATTTCGGTGC 59.086 43.478 0.00 0.00 0.00 5.01
1536 1965 7.485418 TTTAGCGTTTCAGTATCTCAAAACA 57.515 32.000 0.00 0.00 32.46 2.83
1538 1967 9.393249 CAAATTTAGCGTTTCAGTATCTCAAAA 57.607 29.630 0.00 0.00 0.00 2.44
1548 1977 4.215399 TGGAGTCCAAATTTAGCGTTTCAG 59.785 41.667 10.20 0.00 0.00 3.02
1566 1995 5.957771 TTGTGAAGGATATTAGCTGGAGT 57.042 39.130 0.00 0.00 0.00 3.85
1576 2005 8.739972 GGAAACACTACAAATTGTGAAGGATAT 58.260 33.333 9.15 0.00 37.59 1.63
1607 2036 9.443283 CTTAACTGAATTGAAACAAGTTCAGAG 57.557 33.333 24.62 16.22 46.85 3.35
1707 2136 2.417719 AGATTCTCACTCCAAACGTGC 58.582 47.619 0.00 0.00 32.54 5.34
1710 2139 8.883731 ACATATTTTAGATTCTCACTCCAAACG 58.116 33.333 0.00 0.00 0.00 3.60
1773 2223 8.377681 GTCGTATCAGTTCATCAACGAATTTTA 58.622 33.333 0.00 0.00 40.56 1.52
1783 2233 3.630312 TCGATGGTCGTATCAGTTCATCA 59.370 43.478 0.00 0.00 41.35 3.07
1787 2237 2.386249 GCTCGATGGTCGTATCAGTTC 58.614 52.381 0.00 0.00 41.35 3.01
1863 2314 6.257849 CAGCATGTCCAACTATTTACACGTAT 59.742 38.462 0.00 0.00 0.00 3.06
2004 2455 5.931532 ACAAAGCACGTAAAATCATCAGAG 58.068 37.500 0.00 0.00 0.00 3.35
2016 2467 8.237282 TCGTAACATAAAATACAAAGCACGTA 57.763 30.769 0.00 0.00 0.00 3.57
2136 2589 7.295952 TCTCTCGAATTTAACAGCAGATTTC 57.704 36.000 0.00 0.00 0.00 2.17
2222 2676 5.788450 ACAGAGAAAGATTGTGAGTGTAGG 58.212 41.667 0.00 0.00 0.00 3.18
2250 2706 2.901249 ACACCGACCGATAAAATCTGG 58.099 47.619 0.00 0.00 0.00 3.86
2350 2806 3.491447 CCTTTGTCTGTGAAAAGCTTGGG 60.491 47.826 0.00 0.00 33.02 4.12
2414 2871 6.308766 GCAATATTAACAGCACAAGGAACAAG 59.691 38.462 0.00 0.00 0.00 3.16
2418 2875 5.973899 TGCAATATTAACAGCACAAGGAA 57.026 34.783 0.00 0.00 31.05 3.36
2437 2894 7.101700 CACTGCAGGAAGATTATATAGATGCA 58.898 38.462 19.93 0.00 38.70 3.96
2463 2920 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
2466 2923 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
2467 2924 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
2468 2925 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
2469 2926 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
2480 2937 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
2481 2938 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
2482 2939 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
2483 2940 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
2484 2941 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
2485 2942 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
2486 2943 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
2487 2944 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
2488 2945 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
2489 2946 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
2498 2955 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2499 2956 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2500 2957 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2501 2958 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2502 2959 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2503 2960 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2504 2961 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2505 2962 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2507 2964 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2508 2965 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2509 2966 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2510 2967 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2521 2978 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2522 2979 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2523 2980 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2524 2981 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2525 2982 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2526 2983 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2527 2984 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2528 2985 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2529 2986 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2530 2987 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2531 2988 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2532 2989 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2533 2990 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2534 2991 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2535 2992 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2536 2993 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2537 2994 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2538 2995 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2539 2996 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2540 2997 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2541 2998 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2542 2999 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2543 3000 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2544 3001 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2545 3002 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2546 3003 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2547 3004 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2548 3005 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2549 3006 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2550 3007 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2551 3008 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2552 3009 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2553 3010 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2554 3011 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2556 3013 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2557 3014 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2558 3015 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2559 3016 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2560 3017 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2561 3018 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2562 3019 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2570 3027 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2571 3028 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2572 3029 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2573 3030 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2574 3031 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2575 3032 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2576 3033 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2577 3034 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2578 3035 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2579 3036 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2580 3037 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2581 3038 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2582 3039 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2583 3040 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2584 3041 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2585 3042 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2586 3043 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2587 3044 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2588 3045 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
2589 3046 1.656587 TAAGGACAGACCCAGTGCAT 58.343 50.000 0.00 0.00 40.05 3.96
2590 3047 1.656587 ATAAGGACAGACCCAGTGCA 58.343 50.000 0.00 0.00 40.05 4.57
2591 3048 3.906720 TTATAAGGACAGACCCAGTGC 57.093 47.619 0.00 0.00 40.05 4.40
2592 3049 5.878406 AGATTATAAGGACAGACCCAGTG 57.122 43.478 0.00 0.00 40.05 3.66
2593 3050 5.367060 GGAAGATTATAAGGACAGACCCAGT 59.633 44.000 0.00 0.00 40.05 4.00
2594 3051 5.604650 AGGAAGATTATAAGGACAGACCCAG 59.395 44.000 0.00 0.00 40.05 4.45
2595 3052 5.366768 CAGGAAGATTATAAGGACAGACCCA 59.633 44.000 0.00 0.00 40.05 4.51
2596 3053 5.743422 GCAGGAAGATTATAAGGACAGACCC 60.743 48.000 0.00 0.00 40.05 4.46
2597 3054 5.163301 TGCAGGAAGATTATAAGGACAGACC 60.163 44.000 0.00 0.00 39.35 3.85
2598 3055 5.918608 TGCAGGAAGATTATAAGGACAGAC 58.081 41.667 0.00 0.00 0.00 3.51
2599 3056 5.663106 ACTGCAGGAAGATTATAAGGACAGA 59.337 40.000 19.93 0.00 0.00 3.41
2600 3057 5.757320 CACTGCAGGAAGATTATAAGGACAG 59.243 44.000 19.93 0.00 0.00 3.51
2601 3058 5.674525 CACTGCAGGAAGATTATAAGGACA 58.325 41.667 19.93 0.00 0.00 4.02
2602 3059 4.513318 GCACTGCAGGAAGATTATAAGGAC 59.487 45.833 19.93 0.00 0.00 3.85
2603 3060 4.410228 AGCACTGCAGGAAGATTATAAGGA 59.590 41.667 19.93 0.00 0.00 3.36
2604 3061 4.712476 AGCACTGCAGGAAGATTATAAGG 58.288 43.478 19.93 0.00 0.00 2.69
2605 3062 4.754114 GGAGCACTGCAGGAAGATTATAAG 59.246 45.833 19.93 0.00 0.00 1.73
2606 3063 4.410228 AGGAGCACTGCAGGAAGATTATAA 59.590 41.667 19.93 0.00 0.00 0.98
2607 3064 3.969976 AGGAGCACTGCAGGAAGATTATA 59.030 43.478 19.93 0.00 0.00 0.98
2608 3065 2.776536 AGGAGCACTGCAGGAAGATTAT 59.223 45.455 19.93 0.00 0.00 1.28
2609 3066 2.191400 AGGAGCACTGCAGGAAGATTA 58.809 47.619 19.93 0.00 0.00 1.75
2610 3067 0.990374 AGGAGCACTGCAGGAAGATT 59.010 50.000 19.93 0.00 0.00 2.40
2611 3068 0.990374 AAGGAGCACTGCAGGAAGAT 59.010 50.000 19.93 6.07 0.00 2.40
2612 3069 0.767375 AAAGGAGCACTGCAGGAAGA 59.233 50.000 19.93 0.00 0.00 2.87
2613 3070 0.879765 CAAAGGAGCACTGCAGGAAG 59.120 55.000 19.93 8.69 0.00 3.46
2614 3071 0.183492 ACAAAGGAGCACTGCAGGAA 59.817 50.000 19.93 0.00 0.00 3.36
2615 3072 0.183492 AACAAAGGAGCACTGCAGGA 59.817 50.000 19.93 0.00 0.00 3.86
2616 3073 0.313043 CAACAAAGGAGCACTGCAGG 59.687 55.000 19.93 8.27 0.00 4.85
2617 3074 0.313043 CCAACAAAGGAGCACTGCAG 59.687 55.000 13.48 13.48 0.00 4.41
2618 3075 0.106769 TCCAACAAAGGAGCACTGCA 60.107 50.000 3.30 0.00 32.77 4.41
2619 3076 1.251251 ATCCAACAAAGGAGCACTGC 58.749 50.000 0.00 0.00 41.90 4.40
2620 3077 2.229784 GGAATCCAACAAAGGAGCACTG 59.770 50.000 0.00 0.00 41.90 3.66
2621 3078 2.519013 GGAATCCAACAAAGGAGCACT 58.481 47.619 0.00 0.00 41.90 4.40
2622 3079 1.200020 CGGAATCCAACAAAGGAGCAC 59.800 52.381 0.00 0.00 41.90 4.40
2623 3080 1.073125 TCGGAATCCAACAAAGGAGCA 59.927 47.619 0.00 0.00 41.90 4.26
2624 3081 1.821216 TCGGAATCCAACAAAGGAGC 58.179 50.000 0.00 0.00 41.90 4.70
2625 3082 3.821033 ACTTTCGGAATCCAACAAAGGAG 59.179 43.478 15.59 1.09 41.90 3.69
2626 3083 3.827722 ACTTTCGGAATCCAACAAAGGA 58.172 40.909 15.59 0.00 43.01 3.36
2627 3084 5.183140 ACATACTTTCGGAATCCAACAAAGG 59.817 40.000 15.59 5.18 0.00 3.11
2628 3085 6.254281 ACATACTTTCGGAATCCAACAAAG 57.746 37.500 11.65 11.65 0.00 2.77
2629 3086 6.642707 AACATACTTTCGGAATCCAACAAA 57.357 33.333 0.00 0.00 0.00 2.83
2630 3087 7.747155 TTAACATACTTTCGGAATCCAACAA 57.253 32.000 0.00 0.00 0.00 2.83
2631 3088 7.608376 TCATTAACATACTTTCGGAATCCAACA 59.392 33.333 0.00 0.00 0.00 3.33
2632 3089 7.981142 TCATTAACATACTTTCGGAATCCAAC 58.019 34.615 0.00 0.00 0.00 3.77
2641 3098 8.375717 TCGCAATTTTCATTAACATACTTTCG 57.624 30.769 0.00 0.00 0.00 3.46
2664 3121 2.159627 GCAACACTAACATCCCAACTCG 59.840 50.000 0.00 0.00 0.00 4.18
2692 3149 8.552296 ACCCAGACTGAAAATAATCACTATTCT 58.448 33.333 3.32 0.00 29.44 2.40
2697 3154 5.183904 GCAACCCAGACTGAAAATAATCACT 59.816 40.000 3.32 0.00 0.00 3.41
2713 3170 0.881600 GGCAAAAGCAAGCAACCCAG 60.882 55.000 0.00 0.00 0.00 4.45
2740 3197 6.073276 TGTGTCACATCTATAACTTGTGTTGC 60.073 38.462 0.18 0.00 41.14 4.17
2782 3243 4.309933 CATTATCTAGACATGGAGCGCAA 58.690 43.478 11.47 0.00 0.00 4.85
2817 3278 1.795768 TGGACGCTAGCTCACTTTTG 58.204 50.000 13.93 0.00 0.00 2.44
2844 3306 9.914834 TTTATATTTCAACCTGGTTATGCTACT 57.085 29.630 12.53 0.00 0.00 2.57
2845 3307 9.946165 GTTTATATTTCAACCTGGTTATGCTAC 57.054 33.333 12.53 0.00 0.00 3.58
2893 3355 2.391616 TGCAGGTTAGCATGAGAGTG 57.608 50.000 0.00 0.00 40.11 3.51
2894 3356 2.355513 CCTTGCAGGTTAGCATGAGAGT 60.356 50.000 0.00 0.00 45.19 3.24
2896 3358 1.679944 GCCTTGCAGGTTAGCATGAGA 60.680 52.381 0.00 0.00 45.19 3.27
2969 3434 8.044060 TCAGCTAATTTGAGGTGACTATTTTG 57.956 34.615 6.11 0.00 46.31 2.44
2979 3444 6.012745 AGGTCATTTTCAGCTAATTTGAGGT 58.987 36.000 0.00 0.00 0.00 3.85
3022 3488 7.693969 ATTTCTCATGTAGGAAACTTTGAGG 57.306 36.000 11.21 0.00 43.67 3.86
3030 3496 8.109634 AGGAAAGCTAATTTCTCATGTAGGAAA 58.890 33.333 11.32 11.32 45.62 3.13
3066 3532 5.371526 AGAAAGATATGCATACACCACCAG 58.628 41.667 8.99 0.00 0.00 4.00
3134 3603 0.312102 GAAGGCTCAACACACCTTGC 59.688 55.000 0.00 0.00 43.82 4.01
3304 3773 6.930164 CACATCATCTCAGAGGAGGATAAAAG 59.070 42.308 8.18 0.00 41.69 2.27
3340 3809 7.040494 CAGAGGTGTTATCAGATATATGCAGG 58.960 42.308 0.00 0.00 0.00 4.85
3370 3839 9.573133 AAACTAACAGACAGAAAATTGAACAAG 57.427 29.630 0.00 0.00 0.00 3.16
3449 4084 5.503194 GCCATCGAAGCTGATAGAAGAAAAC 60.503 44.000 3.69 0.00 0.00 2.43
3524 4160 2.726821 AGTATTTCCGGACGGAGTACA 58.273 47.619 25.90 9.15 45.67 2.90
3528 4164 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3529 4165 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3530 4166 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3531 4167 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3532 4168 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3533 4169 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3534 4170 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3535 4171 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3542 4178 9.918630 CCTCTTTTATTCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
3587 4223 9.886132 GGACAAAAAGGAATGTATCTAGAACTA 57.114 33.333 0.00 0.00 0.00 2.24
3588 4224 8.383175 TGGACAAAAAGGAATGTATCTAGAACT 58.617 33.333 0.00 0.00 0.00 3.01
3589 4225 8.561738 TGGACAAAAAGGAATGTATCTAGAAC 57.438 34.615 0.00 0.00 0.00 3.01
3590 4226 9.753674 AATGGACAAAAAGGAATGTATCTAGAA 57.246 29.630 0.00 0.00 0.00 2.10
3591 4227 9.753674 AAATGGACAAAAAGGAATGTATCTAGA 57.246 29.630 0.00 0.00 0.00 2.43
3594 4230 8.869109 TCAAAATGGACAAAAAGGAATGTATCT 58.131 29.630 0.00 0.00 0.00 1.98
3595 4231 9.657419 ATCAAAATGGACAAAAAGGAATGTATC 57.343 29.630 0.00 0.00 0.00 2.24
3596 4232 9.439500 CATCAAAATGGACAAAAAGGAATGTAT 57.561 29.630 0.00 0.00 0.00 2.29
3597 4233 8.646004 TCATCAAAATGGACAAAAAGGAATGTA 58.354 29.630 0.00 0.00 33.42 2.29
3598 4234 7.442062 GTCATCAAAATGGACAAAAAGGAATGT 59.558 33.333 0.00 0.00 33.42 2.71
3599 4235 7.441760 TGTCATCAAAATGGACAAAAAGGAATG 59.558 33.333 0.00 0.00 33.42 2.67
3600 4236 7.507829 TGTCATCAAAATGGACAAAAAGGAAT 58.492 30.769 0.00 0.00 33.42 3.01
3601 4237 6.882656 TGTCATCAAAATGGACAAAAAGGAA 58.117 32.000 0.00 0.00 33.42 3.36
3602 4238 6.477053 TGTCATCAAAATGGACAAAAAGGA 57.523 33.333 0.00 0.00 33.42 3.36
3603 4239 6.762661 ACTTGTCATCAAAATGGACAAAAAGG 59.237 34.615 7.70 0.11 34.98 3.11
3604 4240 7.775397 ACTTGTCATCAAAATGGACAAAAAG 57.225 32.000 7.70 0.11 34.98 2.27
3605 4241 8.558973 AAACTTGTCATCAAAATGGACAAAAA 57.441 26.923 7.70 0.00 34.98 1.94
3606 4242 8.558973 AAAACTTGTCATCAAAATGGACAAAA 57.441 26.923 7.70 0.00 34.98 2.44
3607 4243 8.558973 AAAAACTTGTCATCAAAATGGACAAA 57.441 26.923 7.70 0.00 34.98 2.83
3629 4265 1.547372 CTACTCCCTCCGTCCGAAAAA 59.453 52.381 0.00 0.00 0.00 1.94
3630 4266 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3631 4267 1.318158 GCTACTCCCTCCGTCCGAAA 61.318 60.000 0.00 0.00 0.00 3.46
3632 4268 1.751927 GCTACTCCCTCCGTCCGAA 60.752 63.158 0.00 0.00 0.00 4.30
3633 4269 2.124403 GCTACTCCCTCCGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
3634 4270 2.439701 TGCTACTCCCTCCGTCCG 60.440 66.667 0.00 0.00 0.00 4.79
3635 4271 2.424733 GGTGCTACTCCCTCCGTCC 61.425 68.421 0.00 0.00 0.00 4.79
3636 4272 1.380112 AGGTGCTACTCCCTCCGTC 60.380 63.158 0.00 0.00 0.00 4.79
3637 4273 1.682684 CAGGTGCTACTCCCTCCGT 60.683 63.158 0.00 0.00 0.00 4.69
3638 4274 2.427245 CCAGGTGCTACTCCCTCCG 61.427 68.421 0.00 0.00 0.00 4.63
3639 4275 2.066999 CCCAGGTGCTACTCCCTCC 61.067 68.421 0.00 0.00 0.00 4.30
3640 4276 0.399233 ATCCCAGGTGCTACTCCCTC 60.399 60.000 0.00 0.00 0.00 4.30
3641 4277 0.044855 AATCCCAGGTGCTACTCCCT 59.955 55.000 0.00 0.00 0.00 4.20
3642 4278 0.919710 AAATCCCAGGTGCTACTCCC 59.080 55.000 0.00 0.00 0.00 4.30
3643 4279 2.239907 AGAAAATCCCAGGTGCTACTCC 59.760 50.000 0.00 0.00 0.00 3.85
3644 4280 3.055094 TCAGAAAATCCCAGGTGCTACTC 60.055 47.826 0.00 0.00 0.00 2.59
3645 4281 2.912956 TCAGAAAATCCCAGGTGCTACT 59.087 45.455 0.00 0.00 0.00 2.57
3646 4282 3.010420 GTCAGAAAATCCCAGGTGCTAC 58.990 50.000 0.00 0.00 0.00 3.58
3778 4414 1.843368 ACAATGAACCAGGAGGCATG 58.157 50.000 0.00 0.00 39.06 4.06
3977 4613 8.467598 CCATGATCATCAAAAGAAAGAGTTCAT 58.532 33.333 4.86 0.00 36.09 2.57
4011 4647 6.294176 GCACCTGTGTCTAAAACTCATCAATT 60.294 38.462 0.00 0.00 31.37 2.32
4028 4664 2.195922 GCAACAAAAGAAGCACCTGTG 58.804 47.619 0.00 0.00 0.00 3.66
4114 4752 0.696501 TAAGGTCAGGGTTTCAGGGC 59.303 55.000 0.00 0.00 0.00 5.19
4138 4776 5.518847 TCGTCTCACATTCCAAATATCGTTC 59.481 40.000 0.00 0.00 0.00 3.95
4185 4828 1.202698 GGGTCTCATACTCACATGCCC 60.203 57.143 0.00 0.00 0.00 5.36
4259 4902 4.529377 ACAAGTCAATCCATGAGCCAATTT 59.471 37.500 0.00 0.00 39.19 1.82
4283 4926 0.179000 CCGGATCTGGCTAGCAAGTT 59.821 55.000 18.82 10.80 0.00 2.66
4311 4954 2.664185 CGATGATGCCTCAGCCCG 60.664 66.667 1.50 0.10 34.22 6.13
4328 4974 1.862123 CACACGGTCATGTGCAGAC 59.138 57.895 0.00 0.00 43.29 3.51
4351 4997 2.288186 TCGAGATCGTGAGTACATCTGC 59.712 50.000 1.70 0.00 40.80 4.26
4372 5018 3.521727 ACATTCCAGTCCTTAGGTCAGT 58.478 45.455 0.00 0.00 0.00 3.41
4401 5047 3.274288 GACTAGCAACATGCCTAAAGCT 58.726 45.455 0.00 0.00 46.52 3.74
4418 5064 2.540515 GCTAGCTGCGTGAATTGACTA 58.459 47.619 7.70 0.00 0.00 2.59
4442 5088 0.532417 TCGGCTCGCTAGTCCTCTAC 60.532 60.000 0.00 0.00 0.00 2.59
4448 5096 1.587613 CTTGCTCGGCTCGCTAGTC 60.588 63.158 0.00 0.00 0.00 2.59
4452 5100 4.749310 CCACTTGCTCGGCTCGCT 62.749 66.667 0.00 0.00 0.00 4.93
4468 5116 0.391263 CCGGGTGCAGTCTTTCTACC 60.391 60.000 0.00 0.00 0.00 3.18
4477 5125 2.193536 GTTTTCAGCCGGGTGCAGT 61.194 57.895 28.72 0.00 44.83 4.40
4478 5126 1.526575 ATGTTTTCAGCCGGGTGCAG 61.527 55.000 28.72 5.88 44.83 4.41
4479 5127 1.530419 ATGTTTTCAGCCGGGTGCA 60.530 52.632 28.72 20.19 44.83 4.57
4480 5128 1.080569 CATGTTTTCAGCCGGGTGC 60.081 57.895 28.72 14.99 41.71 5.01
4482 5130 2.275380 GCCATGTTTTCAGCCGGGT 61.275 57.895 0.00 0.00 0.00 5.28
4483 5131 2.216750 CTGCCATGTTTTCAGCCGGG 62.217 60.000 2.18 0.00 0.00 5.73
4486 5134 0.529378 CTCCTGCCATGTTTTCAGCC 59.471 55.000 0.00 0.00 0.00 4.85
4487 5135 1.251251 ACTCCTGCCATGTTTTCAGC 58.749 50.000 0.00 0.00 0.00 4.26
4488 5136 3.191371 GGTTACTCCTGCCATGTTTTCAG 59.809 47.826 0.00 0.00 0.00 3.02
4489 5137 3.153919 GGTTACTCCTGCCATGTTTTCA 58.846 45.455 0.00 0.00 0.00 2.69
4578 5226 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
4579 5227 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
4580 5228 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
4581 5229 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
4582 5230 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
4583 5231 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
4584 5232 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
4585 5233 5.237344 CCATCCGTTCCAAAATAGATGACTC 59.763 44.000 0.00 0.00 32.55 3.36
4586 5234 5.104527 TCCATCCGTTCCAAAATAGATGACT 60.105 40.000 0.00 0.00 32.55 3.41
4587 5235 5.123227 TCCATCCGTTCCAAAATAGATGAC 58.877 41.667 0.00 0.00 32.55 3.06
4588 5236 5.104527 ACTCCATCCGTTCCAAAATAGATGA 60.105 40.000 0.00 0.00 32.55 2.92
4589 5237 5.126067 ACTCCATCCGTTCCAAAATAGATG 58.874 41.667 0.00 0.00 31.49 2.90
4590 5238 5.373812 ACTCCATCCGTTCCAAAATAGAT 57.626 39.130 0.00 0.00 0.00 1.98
4591 5239 4.837093 ACTCCATCCGTTCCAAAATAGA 57.163 40.909 0.00 0.00 0.00 1.98
4592 5240 5.671493 ACTACTCCATCCGTTCCAAAATAG 58.329 41.667 0.00 0.00 0.00 1.73
4593 5241 5.188163 TGACTACTCCATCCGTTCCAAAATA 59.812 40.000 0.00 0.00 0.00 1.40
4594 5242 4.019681 TGACTACTCCATCCGTTCCAAAAT 60.020 41.667 0.00 0.00 0.00 1.82
4595 5243 3.325425 TGACTACTCCATCCGTTCCAAAA 59.675 43.478 0.00 0.00 0.00 2.44
4596 5244 2.901192 TGACTACTCCATCCGTTCCAAA 59.099 45.455 0.00 0.00 0.00 3.28
4597 5245 2.232941 GTGACTACTCCATCCGTTCCAA 59.767 50.000 0.00 0.00 0.00 3.53
4598 5246 1.822990 GTGACTACTCCATCCGTTCCA 59.177 52.381 0.00 0.00 0.00 3.53
4599 5247 2.100989 AGTGACTACTCCATCCGTTCC 58.899 52.381 0.00 0.00 28.79 3.62
4600 5248 3.870633 AAGTGACTACTCCATCCGTTC 57.129 47.619 0.00 0.00 35.69 3.95
4601 5249 4.954202 TGATAAGTGACTACTCCATCCGTT 59.046 41.667 0.00 0.00 35.69 4.44
4602 5250 4.533815 TGATAAGTGACTACTCCATCCGT 58.466 43.478 0.00 0.00 35.69 4.69
4603 5251 5.282510 GTTGATAAGTGACTACTCCATCCG 58.717 45.833 0.00 0.00 35.69 4.18
4604 5252 5.128827 TGGTTGATAAGTGACTACTCCATCC 59.871 44.000 0.00 0.00 35.69 3.51
4605 5253 6.043411 GTGGTTGATAAGTGACTACTCCATC 58.957 44.000 0.00 0.00 35.69 3.51
4606 5254 5.721960 AGTGGTTGATAAGTGACTACTCCAT 59.278 40.000 0.00 0.00 35.69 3.41
4607 5255 5.084519 AGTGGTTGATAAGTGACTACTCCA 58.915 41.667 0.00 0.00 35.69 3.86
4608 5256 5.652518 GAGTGGTTGATAAGTGACTACTCC 58.347 45.833 7.68 0.00 42.53 3.85
4609 5257 5.394333 GGGAGTGGTTGATAAGTGACTACTC 60.394 48.000 9.77 9.77 45.52 2.59
4616 5264 2.290260 TGCTGGGAGTGGTTGATAAGTG 60.290 50.000 0.00 0.00 0.00 3.16
4622 5270 1.150536 GGTTGCTGGGAGTGGTTGA 59.849 57.895 0.00 0.00 0.00 3.18
4625 5273 2.839098 CTGGTTGCTGGGAGTGGT 59.161 61.111 0.00 0.00 0.00 4.16
4630 5278 0.539438 ATTTTCGCTGGTTGCTGGGA 60.539 50.000 0.00 0.00 40.11 4.37
4632 5280 0.597568 TGATTTTCGCTGGTTGCTGG 59.402 50.000 0.00 0.00 40.11 4.85
4633 5281 2.420628 TTGATTTTCGCTGGTTGCTG 57.579 45.000 0.00 0.00 40.11 4.41
4634 5282 3.665745 ATTTGATTTTCGCTGGTTGCT 57.334 38.095 0.00 0.00 40.11 3.91
4635 5283 4.683781 TGTAATTTGATTTTCGCTGGTTGC 59.316 37.500 0.00 0.00 38.57 4.17
4636 5284 5.920273 ACTGTAATTTGATTTTCGCTGGTTG 59.080 36.000 0.00 0.00 0.00 3.77
4637 5285 5.920273 CACTGTAATTTGATTTTCGCTGGTT 59.080 36.000 0.00 0.00 0.00 3.67
4638 5286 5.009610 ACACTGTAATTTGATTTTCGCTGGT 59.990 36.000 0.00 0.00 0.00 4.00
4639 5287 5.460646 ACACTGTAATTTGATTTTCGCTGG 58.539 37.500 0.00 0.00 0.00 4.85
4640 5288 5.281376 CGACACTGTAATTTGATTTTCGCTG 59.719 40.000 0.00 0.00 0.00 5.18
4641 5289 5.382303 CGACACTGTAATTTGATTTTCGCT 58.618 37.500 0.00 0.00 0.00 4.93
4642 5290 4.029087 GCGACACTGTAATTTGATTTTCGC 59.971 41.667 0.00 0.00 40.98 4.70
4643 5291 5.143660 TGCGACACTGTAATTTGATTTTCG 58.856 37.500 0.00 0.00 0.00 3.46
4644 5292 6.984740 TTGCGACACTGTAATTTGATTTTC 57.015 33.333 0.00 0.00 0.00 2.29
4664 5312 1.658409 GCCACTTGCTGTCGTTTGC 60.658 57.895 0.00 0.00 36.87 3.68
4722 5372 6.421202 GGTAGCTGTAGCAAACTATGATGTAC 59.579 42.308 6.65 0.00 45.16 2.90
4723 5373 6.323996 AGGTAGCTGTAGCAAACTATGATGTA 59.676 38.462 6.65 0.00 45.16 2.29
4724 5374 5.129485 AGGTAGCTGTAGCAAACTATGATGT 59.871 40.000 6.65 0.00 45.16 3.06
4774 5424 2.111043 CGTGCCAAGGTCACCAGT 59.889 61.111 0.00 0.00 0.00 4.00
4844 5494 7.831690 TCCCTGTATATTTGTCACTGCAATTTA 59.168 33.333 0.00 0.00 0.00 1.40
4862 5512 2.074948 CAGGCCTGCCTCCCTGTAT 61.075 63.158 22.33 0.00 46.28 2.29
4863 5513 2.688666 CAGGCCTGCCTCCCTGTA 60.689 66.667 22.33 0.00 46.28 2.74



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.