Multiple sequence alignment - TraesCS1B01G228300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G228300 chr1B 100.000 4924 0 0 1 4924 409636951 409632028 0.000000e+00 9094
1 TraesCS1B01G228300 chr1A 92.562 1936 83 21 1675 3602 377446059 377444177 0.000000e+00 2721
2 TraesCS1B01G228300 chr1A 94.504 928 44 3 4004 4924 377432597 377431670 0.000000e+00 1424
3 TraesCS1B01G228300 chr1A 94.444 594 24 2 938 1530 377446644 377446059 0.000000e+00 905
4 TraesCS1B01G228300 chr1A 79.817 981 86 39 1 939 377447581 377446671 3.260000e-171 612
5 TraesCS1B01G228300 chr1A 89.706 136 5 2 3604 3739 377444142 377444016 1.100000e-36 165
6 TraesCS1B01G228300 chr1D 87.766 1504 118 24 738 2194 302826029 302824545 0.000000e+00 1698
7 TraesCS1B01G228300 chr1D 88.264 1440 94 19 2191 3602 302824508 302823116 0.000000e+00 1653
8 TraesCS1B01G228300 chr1D 96.009 927 30 3 4004 4924 302822509 302821584 0.000000e+00 1500
9 TraesCS1B01G228300 chr1D 82.303 469 48 18 273 740 302837796 302837362 1.670000e-99 374
10 TraesCS1B01G228300 chr1D 90.217 184 16 2 1 182 302871316 302871133 6.370000e-59 239
11 TraesCS1B01G228300 chr1D 86.957 138 7 3 3604 3739 302823081 302822953 1.430000e-30 145
12 TraesCS1B01G228300 chr3B 83.253 830 88 24 2808 3602 84737787 84736974 0.000000e+00 715
13 TraesCS1B01G228300 chr3B 85.824 522 54 10 2191 2696 84738372 84737855 2.020000e-148 536
14 TraesCS1B01G228300 chr3B 82.667 300 43 5 1832 2122 84738770 84738471 1.760000e-64 257
15 TraesCS1B01G228300 chr3D 85.030 668 71 10 2849 3503 54387027 54386376 0.000000e+00 652
16 TraesCS1B01G228300 chr3D 86.756 521 50 11 2191 2695 54387641 54387124 3.330000e-156 562
17 TraesCS1B01G228300 chr3D 85.324 293 41 2 1832 2122 54388091 54387799 8.010000e-78 302
18 TraesCS1B01G228300 chr3A 86.286 525 47 16 2191 2696 65354979 65354461 9.320000e-152 547
19 TraesCS1B01G228300 chr3A 84.368 467 49 10 3149 3602 65350854 65350399 2.100000e-118 436
20 TraesCS1B01G228300 chr3A 83.425 362 31 14 2801 3138 65354399 65354043 4.790000e-80 309
21 TraesCS1B01G228300 chr3A 85.666 293 40 2 1832 2122 65355429 65355137 1.720000e-79 307


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G228300 chr1B 409632028 409636951 4923 True 9094.000000 9094 100.000000 1 4924 1 chr1B.!!$R1 4923
1 TraesCS1B01G228300 chr1A 377431670 377432597 927 True 1424.000000 1424 94.504000 4004 4924 1 chr1A.!!$R1 920
2 TraesCS1B01G228300 chr1A 377444016 377447581 3565 True 1100.750000 2721 89.132250 1 3739 4 chr1A.!!$R2 3738
3 TraesCS1B01G228300 chr1D 302821584 302826029 4445 True 1249.000000 1698 89.749000 738 4924 4 chr1D.!!$R3 4186
4 TraesCS1B01G228300 chr3B 84736974 84738770 1796 True 502.666667 715 83.914667 1832 3602 3 chr3B.!!$R1 1770
5 TraesCS1B01G228300 chr3D 54386376 54388091 1715 True 505.333333 652 85.703333 1832 3503 3 chr3D.!!$R1 1671
6 TraesCS1B01G228300 chr3A 65350399 65355429 5030 True 399.750000 547 84.936250 1832 3602 4 chr3A.!!$R1 1770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 130 0.105964 CTTGGTGACCGACTGTTGGA 59.894 55.0 20.92 0.0 0.0 3.53 F
361 367 0.112412 ATTTTGCCCTCGGTGGTTCT 59.888 50.0 0.00 0.0 0.0 3.01 F
1605 1821 0.179032 TCTGCCGAAAACCAAGCTGA 60.179 50.0 0.00 0.0 0.0 4.26 F
1837 2055 0.108585 GAGTTCAAGCACTGGGGTCA 59.891 55.0 0.00 0.0 0.0 4.02 F
3443 7024 0.172352 GTTGGGTGTGTGTTGGTGTG 59.828 55.0 0.00 0.0 0.0 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1819 2037 0.109342 CTGACCCCAGTGCTTGAACT 59.891 55.000 0.0 0.0 35.70 3.01 R
1824 2042 1.763770 CTTCCTGACCCCAGTGCTT 59.236 57.895 0.0 0.0 38.74 3.91 R
2477 2852 0.901124 CCACTGAACTCCTCCCTGAG 59.099 60.000 0.0 0.0 38.37 3.35 R
3746 7377 0.103208 ATAGTCCGCACAGTAGCAGC 59.897 55.000 0.0 0.0 0.00 5.25 R
4726 8582 1.222387 GTACCCCGCTAACATGGCA 59.778 57.895 0.0 0.0 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 78 0.186873 GGGGTCACGGTATCCTAGGA 59.813 60.000 15.46 15.46 0.00 2.94
77 83 2.756760 GTCACGGTATCCTAGGACACAA 59.243 50.000 21.57 1.42 0.00 3.33
82 88 3.677976 CGGTATCCTAGGACACAACCAAC 60.678 52.174 21.57 2.37 0.00 3.77
83 89 3.370209 GGTATCCTAGGACACAACCAACC 60.370 52.174 21.57 11.31 0.00 3.77
124 130 0.105964 CTTGGTGACCGACTGTTGGA 59.894 55.000 20.92 0.00 0.00 3.53
177 183 5.601313 ACTGTAGACACTTGGTTCCTTAGAA 59.399 40.000 0.00 0.00 0.00 2.10
179 185 6.285990 TGTAGACACTTGGTTCCTTAGAAAC 58.714 40.000 0.00 0.00 40.37 2.78
188 194 4.720273 TGGTTCCTTAGAAACTATCTCCCC 59.280 45.833 0.00 0.00 40.62 4.81
189 195 4.969999 GGTTCCTTAGAAACTATCTCCCCT 59.030 45.833 0.00 0.00 39.71 4.79
190 196 5.163290 GGTTCCTTAGAAACTATCTCCCCTG 60.163 48.000 0.00 0.00 39.71 4.45
191 197 4.557705 TCCTTAGAAACTATCTCCCCTGG 58.442 47.826 0.00 0.00 39.71 4.45
192 198 4.015541 TCCTTAGAAACTATCTCCCCTGGT 60.016 45.833 0.00 0.00 39.71 4.00
193 199 5.197189 TCCTTAGAAACTATCTCCCCTGGTA 59.803 44.000 0.00 0.00 39.71 3.25
215 221 1.613925 GGTATCTGACGCCATGAGCTA 59.386 52.381 0.00 0.00 40.39 3.32
227 233 1.004185 CATGAGCTAGTGTCGCAATGC 60.004 52.381 0.00 0.00 0.00 3.56
257 263 3.190878 GCCCTTGGCTCATTGTCG 58.809 61.111 0.00 0.00 46.69 4.35
262 268 1.081892 CTTGGCTCATTGTCGTCAGG 58.918 55.000 0.00 0.00 0.00 3.86
266 272 1.476891 GGCTCATTGTCGTCAGGACTA 59.523 52.381 0.00 0.00 46.24 2.59
278 284 5.749109 GTCGTCAGGACTATATTTCTTGGTG 59.251 44.000 0.00 0.00 42.62 4.17
314 320 3.012518 GCTAGGCCATATATGTGCTTGG 58.987 50.000 19.25 16.23 0.00 3.61
315 321 2.592102 AGGCCATATATGTGCTTGGG 57.408 50.000 19.25 3.25 0.00 4.12
316 322 0.890683 GGCCATATATGTGCTTGGGC 59.109 55.000 19.25 10.99 45.86 5.36
317 323 0.523072 GCCATATATGTGCTTGGGCG 59.477 55.000 11.73 0.00 42.25 6.13
318 324 1.896220 CCATATATGTGCTTGGGCGT 58.104 50.000 11.73 0.00 42.25 5.68
319 325 2.874052 GCCATATATGTGCTTGGGCGTA 60.874 50.000 11.73 0.00 42.25 4.42
320 326 2.742053 CCATATATGTGCTTGGGCGTAC 59.258 50.000 11.73 0.00 42.25 3.67
321 327 2.536761 TATATGTGCTTGGGCGTACC 57.463 50.000 0.00 0.00 42.25 3.34
336 342 3.196469 GGCGTACCCCTTAGATATAACCC 59.804 52.174 0.00 0.00 0.00 4.11
352 358 2.052104 CCCGACCCATTTTGCCCTC 61.052 63.158 0.00 0.00 0.00 4.30
353 359 2.406616 CCGACCCATTTTGCCCTCG 61.407 63.158 0.00 0.00 0.00 4.63
354 360 2.406616 CGACCCATTTTGCCCTCGG 61.407 63.158 0.00 0.00 0.00 4.63
355 361 1.304134 GACCCATTTTGCCCTCGGT 60.304 57.895 0.00 0.00 0.00 4.69
357 363 2.350458 CCCATTTTGCCCTCGGTGG 61.350 63.158 0.00 0.00 0.00 4.61
358 364 1.606313 CCATTTTGCCCTCGGTGGT 60.606 57.895 0.00 0.00 0.00 4.16
359 365 1.184970 CCATTTTGCCCTCGGTGGTT 61.185 55.000 0.00 0.00 0.00 3.67
360 366 0.243636 CATTTTGCCCTCGGTGGTTC 59.756 55.000 0.00 0.00 0.00 3.62
361 367 0.112412 ATTTTGCCCTCGGTGGTTCT 59.888 50.000 0.00 0.00 0.00 3.01
362 368 0.536460 TTTTGCCCTCGGTGGTTCTC 60.536 55.000 0.00 0.00 0.00 2.87
363 369 1.701031 TTTGCCCTCGGTGGTTCTCA 61.701 55.000 0.00 0.00 0.00 3.27
364 370 2.111999 TTGCCCTCGGTGGTTCTCAG 62.112 60.000 0.00 0.00 0.00 3.35
365 371 2.982130 CCCTCGGTGGTTCTCAGG 59.018 66.667 0.00 0.00 0.00 3.86
366 372 2.266055 CCTCGGTGGTTCTCAGGC 59.734 66.667 0.00 0.00 0.00 4.85
375 381 1.516423 GTTCTCAGGCGTACCTCCC 59.484 63.158 0.00 0.00 46.34 4.30
376 382 1.684734 TTCTCAGGCGTACCTCCCC 60.685 63.158 0.00 0.00 46.34 4.81
388 394 3.745480 CGTACCTCCCCTATAGTTGACGA 60.745 52.174 0.00 0.00 0.00 4.20
408 414 3.531538 GATCAAATCTAGTTGACGCCCA 58.468 45.455 0.00 0.00 40.22 5.36
418 424 3.566261 GACGCCCACATGTGTCAG 58.434 61.111 23.79 15.77 43.55 3.51
420 426 3.434319 CGCCCACATGTGTCAGCC 61.434 66.667 23.79 6.71 0.00 4.85
421 427 3.434319 GCCCACATGTGTCAGCCG 61.434 66.667 23.79 7.74 0.00 5.52
425 431 4.033776 ACATGTGTCAGCCGGGGG 62.034 66.667 2.18 0.00 0.00 5.40
442 448 4.681978 GAGCCAACGACCGCTGGT 62.682 66.667 12.61 0.00 39.44 4.00
447 453 3.923864 AACGACCGCTGGTGAGCA 61.924 61.111 4.94 0.00 46.62 4.26
450 456 2.343758 GACCGCTGGTGAGCAAGA 59.656 61.111 4.94 0.00 46.62 3.02
451 457 2.029844 GACCGCTGGTGAGCAAGAC 61.030 63.158 4.94 0.00 46.62 3.01
452 458 2.031012 CCGCTGGTGAGCAAGACA 59.969 61.111 0.00 0.00 46.62 3.41
455 461 2.331132 GCTGGTGAGCAAGACAGGC 61.331 63.158 0.00 0.00 45.46 4.85
461 467 1.452833 GAGCAAGACAGGCCATCCC 60.453 63.158 5.01 0.00 0.00 3.85
467 473 1.450312 GACAGGCCATCCCAGTTCG 60.450 63.158 5.01 0.00 32.81 3.95
471 477 1.303317 GGCCATCCCAGTTCGTTGT 60.303 57.895 0.00 0.00 0.00 3.32
476 482 4.025401 CCCAGTTCGTTGTGCGCC 62.025 66.667 4.18 0.00 41.07 6.53
501 507 1.153329 TTCGTTGTCCGCTGGTTGT 60.153 52.632 0.00 0.00 36.19 3.32
514 520 3.555518 GCTGGTTGTCGTTCTTTTCATC 58.444 45.455 0.00 0.00 0.00 2.92
530 536 6.647067 TCTTTTCATCGTGGTTTTTGTTTGTT 59.353 30.769 0.00 0.00 0.00 2.83
633 646 5.107913 CGTGAACATGTTTTTAATGCACAGG 60.108 40.000 13.36 4.68 0.00 4.00
637 650 5.296748 ACATGTTTTTAATGCACAGGGAAC 58.703 37.500 0.00 0.00 0.00 3.62
639 652 5.344743 TGTTTTTAATGCACAGGGAACAA 57.655 34.783 0.00 0.00 0.00 2.83
643 656 5.798125 TTTAATGCACAGGGAACAATTCA 57.202 34.783 0.00 0.00 0.00 2.57
653 666 8.850156 GCACAGGGAACAATTCATTAATATACT 58.150 33.333 0.00 0.00 0.00 2.12
893 931 8.291191 ACCCCGATTAAAAACCGAAAATAATA 57.709 30.769 0.00 0.00 0.00 0.98
895 933 9.752961 CCCCGATTAAAAACCGAAAATAATAAT 57.247 29.630 0.00 0.00 0.00 1.28
927 965 2.266055 CCAGAGTGGGCCGTTCTC 59.734 66.667 13.00 13.00 32.67 2.87
930 968 2.266055 GAGTGGGCCGTTCTCCTG 59.734 66.667 0.00 0.00 0.00 3.86
931 969 2.526873 AGTGGGCCGTTCTCCTGT 60.527 61.111 0.00 0.00 0.00 4.00
933 971 1.228154 GTGGGCCGTTCTCCTGTTT 60.228 57.895 0.00 0.00 0.00 2.83
934 972 1.228124 TGGGCCGTTCTCCTGTTTG 60.228 57.895 0.00 0.00 0.00 2.93
935 973 1.971695 GGGCCGTTCTCCTGTTTGG 60.972 63.158 0.00 0.00 37.10 3.28
936 974 1.072505 GGCCGTTCTCCTGTTTGGA 59.927 57.895 0.00 0.00 43.86 3.53
1195 1265 2.283529 CCACTGCCTCCTGTACCGT 61.284 63.158 0.00 0.00 0.00 4.83
1249 1319 2.042261 AGGCCCCCATCTTACCGT 59.958 61.111 0.00 0.00 0.00 4.83
1251 1321 2.070650 GGCCCCCATCTTACCGTCT 61.071 63.158 0.00 0.00 0.00 4.18
1272 1342 0.396811 CACACCTCCCTTCGGAAACT 59.603 55.000 0.00 0.00 37.86 2.66
1292 1362 2.584418 CCGCTGCACATCTCTCCG 60.584 66.667 0.00 0.00 0.00 4.63
1327 1397 2.946762 GTGCACCTCGGCAACTTC 59.053 61.111 5.22 0.00 46.93 3.01
1331 1401 1.966451 CACCTCGGCAACTTCACCC 60.966 63.158 0.00 0.00 0.00 4.61
1332 1402 2.742372 CCTCGGCAACTTCACCCG 60.742 66.667 0.00 0.00 43.21 5.28
1333 1403 2.030562 CTCGGCAACTTCACCCGT 59.969 61.111 0.00 0.00 42.48 5.28
1335 1405 1.841663 CTCGGCAACTTCACCCGTTG 61.842 60.000 0.00 0.00 43.41 4.10
1336 1406 1.890041 CGGCAACTTCACCCGTTGA 60.890 57.895 7.05 0.00 43.28 3.18
1337 1407 1.652563 GGCAACTTCACCCGTTGAC 59.347 57.895 7.05 0.04 43.28 3.18
1338 1408 1.652563 GCAACTTCACCCGTTGACC 59.347 57.895 7.05 0.00 43.28 4.02
1339 1409 1.938861 CAACTTCACCCGTTGACCG 59.061 57.895 0.00 0.00 43.28 4.79
1340 1410 0.812412 CAACTTCACCCGTTGACCGT 60.812 55.000 0.00 0.00 43.28 4.83
1341 1411 0.531311 AACTTCACCCGTTGACCGTC 60.531 55.000 0.00 0.00 32.26 4.79
1342 1412 1.366366 CTTCACCCGTTGACCGTCT 59.634 57.895 0.00 0.00 32.26 4.18
1343 1413 0.249741 CTTCACCCGTTGACCGTCTT 60.250 55.000 0.00 0.00 32.26 3.01
1344 1414 0.249573 TTCACCCGTTGACCGTCTTC 60.250 55.000 0.00 0.00 32.26 2.87
1345 1415 1.111116 TCACCCGTTGACCGTCTTCT 61.111 55.000 0.00 0.00 33.66 2.85
1346 1416 0.666577 CACCCGTTGACCGTCTTCTC 60.667 60.000 0.00 0.00 33.66 2.87
1427 1498 7.950512 TCTGCCTCAAATCTTTGTTCAATTTA 58.049 30.769 2.82 0.00 39.18 1.40
1428 1499 8.587608 TCTGCCTCAAATCTTTGTTCAATTTAT 58.412 29.630 2.82 0.00 39.18 1.40
1491 1564 6.403092 GCTTTTCTTGGAGATTCTAGCACTTC 60.403 42.308 0.00 0.00 0.00 3.01
1508 1581 4.865365 GCACTTCTACTGGTTCTGTATGTC 59.135 45.833 0.00 0.00 0.00 3.06
1530 1746 7.670364 TGTCGAATTGTAGATGATACATGGAT 58.330 34.615 0.00 0.00 0.00 3.41
1531 1747 7.599998 TGTCGAATTGTAGATGATACATGGATG 59.400 37.037 0.00 0.00 0.00 3.51
1532 1748 6.591448 TCGAATTGTAGATGATACATGGATGC 59.409 38.462 0.00 0.00 0.00 3.91
1533 1749 6.592994 CGAATTGTAGATGATACATGGATGCT 59.407 38.462 0.00 0.00 0.00 3.79
1534 1750 7.118825 CGAATTGTAGATGATACATGGATGCTT 59.881 37.037 0.00 0.00 0.00 3.91
1535 1751 7.683437 ATTGTAGATGATACATGGATGCTTG 57.317 36.000 0.00 0.00 0.00 4.01
1536 1752 5.554070 TGTAGATGATACATGGATGCTTGG 58.446 41.667 0.00 0.00 0.00 3.61
1537 1753 4.719026 AGATGATACATGGATGCTTGGT 57.281 40.909 0.00 0.00 0.00 3.67
1538 1754 4.649692 AGATGATACATGGATGCTTGGTC 58.350 43.478 0.00 3.59 0.00 4.02
1539 1755 4.350225 AGATGATACATGGATGCTTGGTCT 59.650 41.667 0.00 0.00 0.00 3.85
1540 1756 3.812262 TGATACATGGATGCTTGGTCTG 58.188 45.455 0.00 0.00 0.00 3.51
1541 1757 3.200605 TGATACATGGATGCTTGGTCTGT 59.799 43.478 0.00 0.00 0.00 3.41
1542 1758 2.592102 ACATGGATGCTTGGTCTGTT 57.408 45.000 5.12 0.00 0.00 3.16
1543 1759 2.165167 ACATGGATGCTTGGTCTGTTG 58.835 47.619 5.12 0.00 0.00 3.33
1544 1760 2.165167 CATGGATGCTTGGTCTGTTGT 58.835 47.619 0.00 0.00 0.00 3.32
1545 1761 2.363306 TGGATGCTTGGTCTGTTGTT 57.637 45.000 0.00 0.00 0.00 2.83
1546 1762 2.229792 TGGATGCTTGGTCTGTTGTTC 58.770 47.619 0.00 0.00 0.00 3.18
1547 1763 2.229792 GGATGCTTGGTCTGTTGTTCA 58.770 47.619 0.00 0.00 0.00 3.18
1548 1764 2.821969 GGATGCTTGGTCTGTTGTTCAT 59.178 45.455 0.00 0.00 0.00 2.57
1549 1765 4.009675 GGATGCTTGGTCTGTTGTTCATA 58.990 43.478 0.00 0.00 0.00 2.15
1550 1766 4.142600 GGATGCTTGGTCTGTTGTTCATAC 60.143 45.833 0.00 0.00 0.00 2.39
1551 1767 3.814625 TGCTTGGTCTGTTGTTCATACA 58.185 40.909 0.00 0.00 0.00 2.29
1552 1768 4.397420 TGCTTGGTCTGTTGTTCATACAT 58.603 39.130 0.00 0.00 33.44 2.29
1553 1769 4.216042 TGCTTGGTCTGTTGTTCATACATG 59.784 41.667 0.00 0.00 33.44 3.21
1554 1770 4.379813 GCTTGGTCTGTTGTTCATACATGG 60.380 45.833 0.00 0.00 33.44 3.66
1555 1771 4.632327 TGGTCTGTTGTTCATACATGGA 57.368 40.909 0.00 0.00 33.44 3.41
1556 1772 5.178096 TGGTCTGTTGTTCATACATGGAT 57.822 39.130 0.00 0.00 33.44 3.41
1557 1773 4.943093 TGGTCTGTTGTTCATACATGGATG 59.057 41.667 12.09 12.09 33.44 3.51
1558 1774 4.201950 GGTCTGTTGTTCATACATGGATGC 60.202 45.833 13.54 0.64 33.44 3.91
1559 1775 4.637534 GTCTGTTGTTCATACATGGATGCT 59.362 41.667 13.54 0.00 33.44 3.79
1560 1776 5.124457 GTCTGTTGTTCATACATGGATGCTT 59.876 40.000 13.54 0.00 33.44 3.91
1561 1777 5.711506 TCTGTTGTTCATACATGGATGCTTT 59.288 36.000 13.54 0.00 33.44 3.51
1562 1778 5.712004 TGTTGTTCATACATGGATGCTTTG 58.288 37.500 13.54 0.00 33.44 2.77
1563 1779 5.243507 TGTTGTTCATACATGGATGCTTTGT 59.756 36.000 13.54 0.00 33.44 2.83
1564 1780 5.313520 TGTTCATACATGGATGCTTTGTG 57.686 39.130 13.54 0.00 0.00 3.33
1565 1781 4.766373 TGTTCATACATGGATGCTTTGTGT 59.234 37.500 13.54 0.00 0.00 3.72
1566 1782 4.968812 TCATACATGGATGCTTTGTGTG 57.031 40.909 13.54 9.83 34.83 3.82
1567 1783 4.334552 TCATACATGGATGCTTTGTGTGT 58.665 39.130 13.54 0.00 35.01 3.72
1568 1784 4.156373 TCATACATGGATGCTTTGTGTGTG 59.844 41.667 13.54 8.99 35.01 3.82
1569 1785 2.309613 ACATGGATGCTTTGTGTGTGT 58.690 42.857 0.00 0.00 0.00 3.72
1570 1786 2.034939 ACATGGATGCTTTGTGTGTGTG 59.965 45.455 0.00 0.00 0.00 3.82
1571 1787 0.385029 TGGATGCTTTGTGTGTGTGC 59.615 50.000 0.00 0.00 0.00 4.57
1572 1788 0.670162 GGATGCTTTGTGTGTGTGCT 59.330 50.000 0.00 0.00 0.00 4.40
1573 1789 1.601162 GGATGCTTTGTGTGTGTGCTG 60.601 52.381 0.00 0.00 0.00 4.41
1574 1790 1.066002 GATGCTTTGTGTGTGTGCTGT 59.934 47.619 0.00 0.00 0.00 4.40
1575 1791 0.451383 TGCTTTGTGTGTGTGCTGTC 59.549 50.000 0.00 0.00 0.00 3.51
1576 1792 0.451383 GCTTTGTGTGTGTGCTGTCA 59.549 50.000 0.00 0.00 0.00 3.58
1577 1793 1.135431 GCTTTGTGTGTGTGCTGTCAA 60.135 47.619 0.00 0.00 0.00 3.18
1578 1794 2.480073 GCTTTGTGTGTGTGCTGTCAAT 60.480 45.455 0.00 0.00 0.00 2.57
1579 1795 3.772932 CTTTGTGTGTGTGCTGTCAATT 58.227 40.909 0.00 0.00 0.00 2.32
1580 1796 4.733230 GCTTTGTGTGTGTGCTGTCAATTA 60.733 41.667 0.00 0.00 0.00 1.40
1581 1797 5.512753 TTTGTGTGTGTGCTGTCAATTAT 57.487 34.783 0.00 0.00 0.00 1.28
1582 1798 4.486574 TGTGTGTGTGCTGTCAATTATG 57.513 40.909 0.00 0.00 0.00 1.90
1583 1799 3.252944 TGTGTGTGTGCTGTCAATTATGG 59.747 43.478 0.00 0.00 0.00 2.74
1584 1800 3.253188 GTGTGTGTGCTGTCAATTATGGT 59.747 43.478 0.00 0.00 0.00 3.55
1585 1801 3.888323 TGTGTGTGCTGTCAATTATGGTT 59.112 39.130 0.00 0.00 0.00 3.67
1586 1802 4.340666 TGTGTGTGCTGTCAATTATGGTTT 59.659 37.500 0.00 0.00 0.00 3.27
1587 1803 4.917415 GTGTGTGCTGTCAATTATGGTTTC 59.083 41.667 0.00 0.00 0.00 2.78
1588 1804 4.826733 TGTGTGCTGTCAATTATGGTTTCT 59.173 37.500 0.00 0.00 0.00 2.52
1589 1805 5.156355 GTGTGCTGTCAATTATGGTTTCTG 58.844 41.667 0.00 0.00 0.00 3.02
1590 1806 4.168760 GTGCTGTCAATTATGGTTTCTGC 58.831 43.478 0.00 0.00 0.00 4.26
1591 1807 3.193267 TGCTGTCAATTATGGTTTCTGCC 59.807 43.478 0.00 0.00 0.00 4.85
1592 1808 3.731867 GCTGTCAATTATGGTTTCTGCCG 60.732 47.826 0.00 0.00 0.00 5.69
1593 1809 3.680490 TGTCAATTATGGTTTCTGCCGA 58.320 40.909 0.00 0.00 0.00 5.54
1594 1810 4.075682 TGTCAATTATGGTTTCTGCCGAA 58.924 39.130 0.00 0.00 0.00 4.30
1595 1811 4.520874 TGTCAATTATGGTTTCTGCCGAAA 59.479 37.500 0.00 0.00 36.82 3.46
1596 1812 5.010112 TGTCAATTATGGTTTCTGCCGAAAA 59.990 36.000 4.76 0.00 40.57 2.29
1597 1813 5.344933 GTCAATTATGGTTTCTGCCGAAAAC 59.655 40.000 11.34 11.34 45.10 2.43
1598 1814 3.926821 TTATGGTTTCTGCCGAAAACC 57.073 42.857 15.03 14.76 44.43 3.27
1599 1815 1.698506 ATGGTTTCTGCCGAAAACCA 58.301 45.000 22.18 22.18 44.43 3.67
1600 1816 1.475403 TGGTTTCTGCCGAAAACCAA 58.525 45.000 19.35 0.82 44.43 3.67
1601 1817 1.407258 TGGTTTCTGCCGAAAACCAAG 59.593 47.619 19.35 0.00 44.43 3.61
1602 1818 1.487482 GTTTCTGCCGAAAACCAAGC 58.513 50.000 4.76 0.00 40.57 4.01
1603 1819 1.067060 GTTTCTGCCGAAAACCAAGCT 59.933 47.619 4.76 0.00 40.57 3.74
1604 1820 0.667993 TTCTGCCGAAAACCAAGCTG 59.332 50.000 0.00 0.00 0.00 4.24
1605 1821 0.179032 TCTGCCGAAAACCAAGCTGA 60.179 50.000 0.00 0.00 0.00 4.26
1606 1822 0.667993 CTGCCGAAAACCAAGCTGAA 59.332 50.000 0.00 0.00 0.00 3.02
1607 1823 1.270550 CTGCCGAAAACCAAGCTGAAT 59.729 47.619 0.00 0.00 0.00 2.57
1608 1824 1.686052 TGCCGAAAACCAAGCTGAATT 59.314 42.857 0.00 0.00 0.00 2.17
1609 1825 2.288152 TGCCGAAAACCAAGCTGAATTC 60.288 45.455 0.00 0.00 0.00 2.17
1610 1826 2.926586 GCCGAAAACCAAGCTGAATTCC 60.927 50.000 2.27 0.00 0.00 3.01
1611 1827 2.558359 CCGAAAACCAAGCTGAATTCCT 59.442 45.455 2.27 0.00 0.00 3.36
1612 1828 3.366374 CCGAAAACCAAGCTGAATTCCTC 60.366 47.826 2.27 0.00 0.00 3.71
1613 1829 3.667960 CGAAAACCAAGCTGAATTCCTCG 60.668 47.826 2.27 0.00 0.00 4.63
1614 1830 1.826385 AACCAAGCTGAATTCCTCGG 58.174 50.000 2.27 0.00 0.00 4.63
1615 1831 0.693049 ACCAAGCTGAATTCCTCGGT 59.307 50.000 2.27 0.00 32.37 4.69
1616 1832 1.073923 ACCAAGCTGAATTCCTCGGTT 59.926 47.619 2.27 0.90 32.37 4.44
1617 1833 2.304761 ACCAAGCTGAATTCCTCGGTTA 59.695 45.455 2.27 0.00 32.37 2.85
1618 1834 3.244770 ACCAAGCTGAATTCCTCGGTTAA 60.245 43.478 2.27 0.00 32.37 2.01
1619 1835 3.127030 CCAAGCTGAATTCCTCGGTTAAC 59.873 47.826 2.27 0.00 32.37 2.01
1620 1836 3.983044 AGCTGAATTCCTCGGTTAACT 57.017 42.857 5.42 0.00 32.37 2.24
1621 1837 3.600388 AGCTGAATTCCTCGGTTAACTG 58.400 45.455 8.22 8.22 32.37 3.16
1622 1838 3.260884 AGCTGAATTCCTCGGTTAACTGA 59.739 43.478 16.21 16.21 32.37 3.41
1623 1839 4.000988 GCTGAATTCCTCGGTTAACTGAA 58.999 43.478 17.63 9.90 32.37 3.02
1624 1840 4.454504 GCTGAATTCCTCGGTTAACTGAAA 59.545 41.667 17.63 10.72 32.37 2.69
1625 1841 5.123979 GCTGAATTCCTCGGTTAACTGAAAT 59.876 40.000 17.63 12.41 32.37 2.17
1626 1842 6.494893 TGAATTCCTCGGTTAACTGAAATG 57.505 37.500 17.63 9.62 0.00 2.32
1627 1843 6.001460 TGAATTCCTCGGTTAACTGAAATGT 58.999 36.000 17.63 7.20 0.00 2.71
1628 1844 6.148811 TGAATTCCTCGGTTAACTGAAATGTC 59.851 38.462 17.63 13.93 0.00 3.06
1629 1845 3.581755 TCCTCGGTTAACTGAAATGTCG 58.418 45.455 17.63 5.50 0.00 4.35
1630 1846 2.671396 CCTCGGTTAACTGAAATGTCGG 59.329 50.000 17.63 10.52 36.09 4.79
1631 1847 3.323243 CTCGGTTAACTGAAATGTCGGT 58.677 45.455 17.63 0.00 45.80 4.69
1640 1856 5.576447 ACTGAAATGTCGGTTTTCACTTT 57.424 34.783 0.00 0.00 40.72 2.66
1641 1857 5.961272 ACTGAAATGTCGGTTTTCACTTTT 58.039 33.333 0.00 0.00 40.72 2.27
1642 1858 6.394809 ACTGAAATGTCGGTTTTCACTTTTT 58.605 32.000 0.00 0.00 40.72 1.94
1643 1859 6.310224 ACTGAAATGTCGGTTTTCACTTTTTG 59.690 34.615 0.00 0.00 40.72 2.44
1644 1860 6.390721 TGAAATGTCGGTTTTCACTTTTTGA 58.609 32.000 4.82 0.00 37.97 2.69
1645 1861 6.309251 TGAAATGTCGGTTTTCACTTTTTGAC 59.691 34.615 4.82 0.00 37.97 3.18
1646 1862 5.576447 ATGTCGGTTTTCACTTTTTGACT 57.424 34.783 0.00 0.00 32.26 3.41
1647 1863 4.728534 TGTCGGTTTTCACTTTTTGACTG 58.271 39.130 0.00 0.00 32.26 3.51
1648 1864 3.546271 GTCGGTTTTCACTTTTTGACTGC 59.454 43.478 0.00 0.00 32.26 4.40
1649 1865 2.857748 CGGTTTTCACTTTTTGACTGCC 59.142 45.455 0.00 0.00 32.26 4.85
1650 1866 3.428862 CGGTTTTCACTTTTTGACTGCCT 60.429 43.478 0.00 0.00 32.26 4.75
1651 1867 4.201970 CGGTTTTCACTTTTTGACTGCCTA 60.202 41.667 0.00 0.00 32.26 3.93
1652 1868 5.656480 GGTTTTCACTTTTTGACTGCCTAA 58.344 37.500 0.00 0.00 32.26 2.69
1653 1869 6.280643 GGTTTTCACTTTTTGACTGCCTAAT 58.719 36.000 0.00 0.00 32.26 1.73
1654 1870 6.761242 GGTTTTCACTTTTTGACTGCCTAATT 59.239 34.615 0.00 0.00 32.26 1.40
1655 1871 7.042725 GGTTTTCACTTTTTGACTGCCTAATTC 60.043 37.037 0.00 0.00 32.26 2.17
1656 1872 6.707440 TTCACTTTTTGACTGCCTAATTCA 57.293 33.333 0.00 0.00 32.26 2.57
1657 1873 6.317789 TCACTTTTTGACTGCCTAATTCAG 57.682 37.500 0.00 0.00 37.56 3.02
1658 1874 5.827797 TCACTTTTTGACTGCCTAATTCAGT 59.172 36.000 0.00 0.00 46.46 3.41
1659 1875 6.321181 TCACTTTTTGACTGCCTAATTCAGTT 59.679 34.615 0.32 0.00 44.09 3.16
1660 1876 7.500892 TCACTTTTTGACTGCCTAATTCAGTTA 59.499 33.333 0.32 0.00 44.09 2.24
1661 1877 7.591426 CACTTTTTGACTGCCTAATTCAGTTAC 59.409 37.037 0.32 0.00 44.09 2.50
1662 1878 6.569179 TTTTGACTGCCTAATTCAGTTACC 57.431 37.500 0.32 0.00 44.09 2.85
1663 1879 4.901197 TGACTGCCTAATTCAGTTACCA 57.099 40.909 0.32 0.00 44.09 3.25
1664 1880 4.575885 TGACTGCCTAATTCAGTTACCAC 58.424 43.478 0.32 0.00 44.09 4.16
1665 1881 4.041075 TGACTGCCTAATTCAGTTACCACA 59.959 41.667 0.32 0.00 44.09 4.17
1666 1882 5.179452 ACTGCCTAATTCAGTTACCACAT 57.821 39.130 0.00 0.00 41.61 3.21
1667 1883 6.070481 TGACTGCCTAATTCAGTTACCACATA 60.070 38.462 0.32 0.00 44.09 2.29
1668 1884 6.349300 ACTGCCTAATTCAGTTACCACATAG 58.651 40.000 0.00 0.00 41.61 2.23
1669 1885 5.123227 TGCCTAATTCAGTTACCACATAGC 58.877 41.667 0.00 0.00 0.00 2.97
1670 1886 5.123227 GCCTAATTCAGTTACCACATAGCA 58.877 41.667 0.00 0.00 0.00 3.49
1671 1887 5.007724 GCCTAATTCAGTTACCACATAGCAC 59.992 44.000 0.00 0.00 0.00 4.40
1672 1888 6.349300 CCTAATTCAGTTACCACATAGCACT 58.651 40.000 0.00 0.00 0.00 4.40
1673 1889 7.497595 CCTAATTCAGTTACCACATAGCACTA 58.502 38.462 0.00 0.00 0.00 2.74
1674 1890 7.985184 CCTAATTCAGTTACCACATAGCACTAA 59.015 37.037 0.00 0.00 0.00 2.24
1755 1972 1.087771 CGCCACATACCCTTTCCGTC 61.088 60.000 0.00 0.00 0.00 4.79
1760 1977 2.170607 CACATACCCTTTCCGTCCTCAT 59.829 50.000 0.00 0.00 0.00 2.90
1805 2023 1.866237 CAAGCGCTGCCGAAAAGTA 59.134 52.632 12.58 0.00 36.29 2.24
1819 2037 2.942604 AAAGTAGGTCCTAGCTGGGA 57.057 50.000 15.99 15.99 36.20 4.37
1824 2042 0.413832 AGGTCCTAGCTGGGAGTTCA 59.586 55.000 20.72 0.00 35.87 3.18
1830 2048 1.277557 CTAGCTGGGAGTTCAAGCACT 59.722 52.381 0.00 0.00 0.00 4.40
1837 2055 0.108585 GAGTTCAAGCACTGGGGTCA 59.891 55.000 0.00 0.00 0.00 4.02
1847 2065 0.842467 ACTGGGGTCAGGAAGGGAAG 60.842 60.000 0.00 0.00 44.99 3.46
1991 2209 1.153568 CGCCACGACCATCATCACT 60.154 57.895 0.00 0.00 0.00 3.41
2064 2290 5.732288 CATTCTACTTTTATGCAGCGTCTC 58.268 41.667 0.00 0.00 0.00 3.36
2100 2327 3.435566 GCATGATCAATTCACAGCTGTG 58.564 45.455 36.07 36.07 46.91 3.66
2122 2349 5.355350 GTGATGGGGTTTGAGAAATCTAGTG 59.645 44.000 0.00 0.00 0.00 2.74
2428 2797 4.691216 CCGCTTTTTGTAACTCTAGAAGCT 59.309 41.667 0.00 0.00 36.72 3.74
2438 2809 2.493675 ACTCTAGAAGCTTGTGCGATGA 59.506 45.455 2.10 0.00 45.42 2.92
2712 3087 1.200948 GCTGAAGCTTGACCACATTCC 59.799 52.381 2.10 0.00 38.21 3.01
2714 3089 0.804989 GAAGCTTGACCACATTCCCG 59.195 55.000 2.10 0.00 0.00 5.14
2884 3273 5.915196 GTCTCTTAGCATTTTGTTTTCGCTT 59.085 36.000 0.00 0.00 34.18 4.68
3165 6746 2.952310 CCCATCCCTTAAAACTAGCAGC 59.048 50.000 0.00 0.00 0.00 5.25
3168 6749 5.456763 CCCATCCCTTAAAACTAGCAGCTAT 60.457 44.000 1.54 0.00 0.00 2.97
3317 6898 9.712359 AAGAAACGAAACAATAGTACTGAAAAC 57.288 29.630 5.39 0.00 0.00 2.43
3321 6902 8.149973 ACGAAACAATAGTACTGAAAACATGT 57.850 30.769 5.39 0.00 0.00 3.21
3322 6903 8.617809 ACGAAACAATAGTACTGAAAACATGTT 58.382 29.630 4.92 4.92 0.00 2.71
3323 6904 9.445786 CGAAACAATAGTACTGAAAACATGTTT 57.554 29.630 18.13 18.13 40.12 2.83
3364 6945 6.189859 TGATCTAATGCTTTTCCACTCCATT 58.810 36.000 0.00 0.00 0.00 3.16
3437 7018 2.810870 TGTTAGGTTGGGTGTGTGTT 57.189 45.000 0.00 0.00 0.00 3.32
3438 7019 2.370349 TGTTAGGTTGGGTGTGTGTTG 58.630 47.619 0.00 0.00 0.00 3.33
3439 7020 1.679153 GTTAGGTTGGGTGTGTGTTGG 59.321 52.381 0.00 0.00 0.00 3.77
3440 7021 0.920438 TAGGTTGGGTGTGTGTTGGT 59.080 50.000 0.00 0.00 0.00 3.67
3441 7022 0.682855 AGGTTGGGTGTGTGTTGGTG 60.683 55.000 0.00 0.00 0.00 4.17
3442 7023 0.968393 GGTTGGGTGTGTGTTGGTGT 60.968 55.000 0.00 0.00 0.00 4.16
3443 7024 0.172352 GTTGGGTGTGTGTTGGTGTG 59.828 55.000 0.00 0.00 0.00 3.82
3444 7025 0.251386 TTGGGTGTGTGTTGGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
3454 7035 4.021368 GTGTGTTGGTGTGTCCTACTATCT 60.021 45.833 0.00 0.00 41.34 1.98
3462 7045 3.301274 GTGTCCTACTATCTGGAGCCTT 58.699 50.000 0.00 0.00 32.36 4.35
3476 7059 4.562767 TGGAGCCTTATTACCCAGACATA 58.437 43.478 0.00 0.00 0.00 2.29
3483 7066 6.431234 GCCTTATTACCCAGACATATTGAAGG 59.569 42.308 0.00 0.00 33.28 3.46
3537 7122 2.707849 GCATGAAGGTGGCTGCAGG 61.708 63.158 17.12 0.00 34.77 4.85
3591 7187 5.258051 AGCTGGAATTATTTTACGGAACCA 58.742 37.500 0.00 0.00 0.00 3.67
3602 7198 5.365403 TTTACGGAACCATTTAGCTTGTG 57.635 39.130 0.00 0.00 0.00 3.33
3612 7241 4.322198 CCATTTAGCTTGTGGCAATGTTCT 60.322 41.667 0.00 0.00 44.79 3.01
3702 7333 3.883489 ACTTAAAGTGGTCTGGTGAAAGC 59.117 43.478 0.00 0.00 0.00 3.51
3709 7340 0.884704 GTCTGGTGAAAGCGCCTTGA 60.885 55.000 2.29 0.00 45.15 3.02
3715 7346 1.541588 GTGAAAGCGCCTTGAGGAAAT 59.458 47.619 2.29 0.00 37.39 2.17
3716 7347 2.747446 GTGAAAGCGCCTTGAGGAAATA 59.253 45.455 2.29 0.00 37.39 1.40
3717 7348 2.747446 TGAAAGCGCCTTGAGGAAATAC 59.253 45.455 2.29 0.00 37.39 1.89
3718 7349 2.789409 AAGCGCCTTGAGGAAATACT 57.211 45.000 2.29 0.00 37.39 2.12
3719 7350 2.029838 AGCGCCTTGAGGAAATACTG 57.970 50.000 2.29 0.00 37.39 2.74
3759 7390 3.075998 CGAAGCTGCTACTGTGCG 58.924 61.111 0.90 0.00 35.36 5.34
3760 7391 2.447887 CGAAGCTGCTACTGTGCGG 61.448 63.158 0.90 6.67 41.91 5.69
3761 7392 1.079819 GAAGCTGCTACTGTGCGGA 60.080 57.895 0.90 0.00 41.56 5.54
3762 7393 1.355066 GAAGCTGCTACTGTGCGGAC 61.355 60.000 0.90 0.00 41.56 4.79
3763 7394 1.821061 AAGCTGCTACTGTGCGGACT 61.821 55.000 8.99 8.00 41.56 3.85
3764 7395 0.965866 AGCTGCTACTGTGCGGACTA 60.966 55.000 8.99 0.00 41.56 2.59
3765 7396 0.103208 GCTGCTACTGTGCGGACTAT 59.897 55.000 8.99 0.00 41.56 2.12
3766 7397 1.471676 GCTGCTACTGTGCGGACTATT 60.472 52.381 8.99 0.00 41.56 1.73
3767 7398 2.223735 GCTGCTACTGTGCGGACTATTA 60.224 50.000 8.99 0.00 41.56 0.98
3768 7399 3.553096 GCTGCTACTGTGCGGACTATTAT 60.553 47.826 8.99 0.00 41.56 1.28
3769 7400 3.977427 TGCTACTGTGCGGACTATTATG 58.023 45.455 8.99 0.00 35.36 1.90
3770 7401 3.634910 TGCTACTGTGCGGACTATTATGA 59.365 43.478 8.99 0.00 35.36 2.15
3771 7402 3.982058 GCTACTGTGCGGACTATTATGAC 59.018 47.826 8.99 0.00 0.00 3.06
3772 7403 3.454371 ACTGTGCGGACTATTATGACC 57.546 47.619 8.99 0.00 0.00 4.02
3773 7404 3.031736 ACTGTGCGGACTATTATGACCT 58.968 45.455 8.99 0.00 0.00 3.85
3783 7414 5.929415 GGACTATTATGACCTAGCTTTGCTC 59.071 44.000 0.00 0.00 40.44 4.26
3784 7415 5.533482 ACTATTATGACCTAGCTTTGCTCG 58.467 41.667 0.00 0.00 40.44 5.03
3803 7434 2.610374 TCGTTTGACCCTTTTGTTCTCG 59.390 45.455 0.00 0.00 0.00 4.04
3807 7438 3.007473 TGACCCTTTTGTTCTCGGTTT 57.993 42.857 0.00 0.00 0.00 3.27
3816 7447 7.255346 CCCTTTTGTTCTCGGTTTTATGTAACT 60.255 37.037 0.00 0.00 0.00 2.24
3817 7448 8.776470 CCTTTTGTTCTCGGTTTTATGTAACTA 58.224 33.333 0.00 0.00 0.00 2.24
3838 7469 5.604231 ACTATATCAGTCCTGGAGATTGCAA 59.396 40.000 0.00 0.00 32.40 4.08
3842 7473 3.582647 TCAGTCCTGGAGATTGCAAGTTA 59.417 43.478 4.94 0.00 32.40 2.24
3843 7474 4.225942 TCAGTCCTGGAGATTGCAAGTTAT 59.774 41.667 4.94 0.00 32.40 1.89
3844 7475 4.574013 CAGTCCTGGAGATTGCAAGTTATC 59.426 45.833 4.94 0.00 0.00 1.75
3847 7478 5.415701 GTCCTGGAGATTGCAAGTTATCAAA 59.584 40.000 4.94 0.00 0.00 2.69
3848 7479 5.415701 TCCTGGAGATTGCAAGTTATCAAAC 59.584 40.000 4.94 0.00 35.72 2.93
3849 7480 5.393461 CCTGGAGATTGCAAGTTATCAAACC 60.393 44.000 4.94 3.94 36.15 3.27
3855 7486 9.691362 GAGATTGCAAGTTATCAAACCTTTTTA 57.309 29.630 4.94 0.00 36.15 1.52
3895 7696 9.862585 CTTTCAAACTTGTAAATGCCAAATTAC 57.137 29.630 0.00 0.00 33.59 1.89
3896 7697 7.630470 TCAAACTTGTAAATGCCAAATTACG 57.370 32.000 0.00 0.00 35.30 3.18
3899 7700 6.334102 ACTTGTAAATGCCAAATTACGGAA 57.666 33.333 0.00 0.00 35.30 4.30
3902 7703 6.274157 TGTAAATGCCAAATTACGGAATGT 57.726 33.333 0.00 0.00 35.30 2.71
3909 7710 4.142271 GCCAAATTACGGAATGTGAATGGA 60.142 41.667 12.46 0.00 32.62 3.41
3933 7734 4.590850 AATTGTGCTGGGTTTCTCTTTC 57.409 40.909 0.00 0.00 0.00 2.62
3945 7746 8.166422 TGGGTTTCTCTTTCATAAAGTTCTTC 57.834 34.615 0.00 0.00 39.52 2.87
3947 7748 7.230712 GGGTTTCTCTTTCATAAAGTTCTTCCA 59.769 37.037 0.00 0.00 39.52 3.53
3948 7749 8.630037 GGTTTCTCTTTCATAAAGTTCTTCCAA 58.370 33.333 0.00 0.00 39.52 3.53
3949 7750 9.670719 GTTTCTCTTTCATAAAGTTCTTCCAAG 57.329 33.333 0.00 0.00 39.52 3.61
3950 7751 9.627123 TTTCTCTTTCATAAAGTTCTTCCAAGA 57.373 29.630 0.00 0.00 39.52 3.02
3952 7753 8.651389 TCTCTTTCATAAAGTTCTTCCAAGAGA 58.349 33.333 10.52 10.52 40.75 3.10
3953 7754 9.277783 CTCTTTCATAAAGTTCTTCCAAGAGAA 57.722 33.333 0.00 0.00 37.85 2.87
3964 7765 2.863809 TCCAAGAGAAGAAACCCTTGC 58.136 47.619 0.00 0.00 35.83 4.01
3965 7766 1.889170 CCAAGAGAAGAAACCCTTGCC 59.111 52.381 0.00 0.00 35.83 4.52
3966 7767 1.537202 CAAGAGAAGAAACCCTTGCCG 59.463 52.381 0.00 0.00 34.68 5.69
3991 7798 1.665735 CGGCCACCGTTTCAGAAAATG 60.666 52.381 2.24 0.00 42.73 2.32
3993 7800 2.223947 GGCCACCGTTTCAGAAAATGTT 60.224 45.455 0.00 0.00 30.71 2.71
3996 7803 4.429108 CCACCGTTTCAGAAAATGTTGTT 58.571 39.130 0.00 0.00 30.71 2.83
4014 7863 8.718102 ATGTTGTTCTGTGGTATACTGATAAC 57.282 34.615 2.25 2.96 37.15 1.89
4038 7887 1.027357 CAACACTCAACTGGCAGCTT 58.973 50.000 15.89 5.45 0.00 3.74
4055 7904 2.620585 AGCTTGGTGAAAGAGAAACTGC 59.379 45.455 0.00 0.00 38.24 4.40
4088 7937 1.262950 TGGAACGCAAATCAACACTCG 59.737 47.619 0.00 0.00 0.00 4.18
4121 7970 0.250081 TTGTTTCCAAATTGCGGCCC 60.250 50.000 0.00 0.00 0.00 5.80
4137 7989 1.547372 GGCCCTGTGTTTCGTAGAGTA 59.453 52.381 0.00 0.00 38.43 2.59
4149 8001 1.859703 CGTAGAGTAGATGCTCGTCGT 59.140 52.381 0.00 0.00 40.26 4.34
4173 8025 3.433615 CCTGGTCACATTTTTCTCTCGTC 59.566 47.826 0.00 0.00 0.00 4.20
4201 8054 4.864334 GGATGGTGGCCTGCGGAG 62.864 72.222 3.32 0.00 0.00 4.63
4726 8582 0.321671 ACAGCGTGTACTCCTGCAAT 59.678 50.000 11.13 0.00 0.00 3.56
4765 8621 3.073735 CACCTCTCCCTCGCAGCT 61.074 66.667 0.00 0.00 0.00 4.24
4786 8642 3.929948 GCGGCGGAGATCTTTGCG 61.930 66.667 9.78 3.20 34.82 4.85
4831 8687 5.011533 CACCTCCTATAACTCTGCTATGCTT 59.988 44.000 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 5.106869 GCATTCAATACCGTGTTACTCAACA 60.107 40.000 0.00 0.00 42.39 3.33
31 32 3.437428 CCACAATGCATTCAATACCGTG 58.563 45.455 9.53 12.30 0.00 4.94
32 33 2.426738 CCCACAATGCATTCAATACCGT 59.573 45.455 9.53 0.00 0.00 4.83
58 60 2.159142 GGTTGTGTCCTAGGATACCGTG 60.159 54.545 29.60 0.00 35.75 4.94
72 78 1.228033 GGCCTACGGTTGGTTGTGT 60.228 57.895 10.26 0.00 0.00 3.72
77 83 1.493854 TTGGATGGCCTACGGTTGGT 61.494 55.000 3.32 0.00 34.31 3.67
82 88 1.416401 ACATAGTTGGATGGCCTACGG 59.584 52.381 3.32 0.00 43.51 4.02
83 89 2.910688 ACATAGTTGGATGGCCTACG 57.089 50.000 3.32 0.00 43.51 3.51
95 101 4.062991 GTCGGTCACCAAGAAACATAGTT 58.937 43.478 0.00 0.00 0.00 2.24
124 130 2.639839 CGAACCCCCTAATGGATGAGAT 59.360 50.000 0.00 0.00 35.39 2.75
152 158 4.772886 AAGGAACCAAGTGTCTACAGTT 57.227 40.909 0.00 0.00 39.91 3.16
177 183 3.726837 ACCATACCAGGGGAGATAGTT 57.273 47.619 0.00 0.00 0.00 2.24
179 185 4.959210 CAGATACCATACCAGGGGAGATAG 59.041 50.000 0.00 0.00 0.00 2.08
188 194 1.686587 TGGCGTCAGATACCATACCAG 59.313 52.381 0.00 0.00 0.00 4.00
189 195 1.783071 TGGCGTCAGATACCATACCA 58.217 50.000 0.00 0.00 0.00 3.25
190 196 2.299013 TCATGGCGTCAGATACCATACC 59.701 50.000 0.00 0.00 42.31 2.73
191 197 3.579709 CTCATGGCGTCAGATACCATAC 58.420 50.000 0.00 0.00 42.31 2.39
192 198 2.029020 GCTCATGGCGTCAGATACCATA 60.029 50.000 0.00 0.00 42.31 2.74
193 199 1.270518 GCTCATGGCGTCAGATACCAT 60.271 52.381 0.00 2.01 45.08 3.55
227 233 2.550978 CCAAGGGCTATACACAAGTCG 58.449 52.381 0.00 0.00 0.00 4.18
257 263 5.368989 CCCACCAAGAAATATAGTCCTGAC 58.631 45.833 0.00 0.00 0.00 3.51
262 268 5.998363 CCTAAGCCCACCAAGAAATATAGTC 59.002 44.000 0.00 0.00 0.00 2.59
266 272 3.566351 GCCTAAGCCCACCAAGAAATAT 58.434 45.455 0.00 0.00 0.00 1.28
297 303 0.890683 GCCCAAGCACATATATGGCC 59.109 55.000 16.96 0.00 39.53 5.36
303 309 3.396951 GGTACGCCCAAGCACATAT 57.603 52.632 0.00 0.00 39.83 1.78
304 310 4.946038 GGTACGCCCAAGCACATA 57.054 55.556 0.00 0.00 39.83 2.29
314 320 3.196469 GGGTTATATCTAAGGGGTACGCC 59.804 52.174 20.94 20.94 44.92 5.68
315 321 3.119352 CGGGTTATATCTAAGGGGTACGC 60.119 52.174 0.29 0.29 43.76 4.42
316 322 4.156739 GTCGGGTTATATCTAAGGGGTACG 59.843 50.000 0.00 0.00 0.00 3.67
317 323 4.464244 GGTCGGGTTATATCTAAGGGGTAC 59.536 50.000 0.00 0.00 0.00 3.34
318 324 4.510930 GGGTCGGGTTATATCTAAGGGGTA 60.511 50.000 0.00 0.00 0.00 3.69
319 325 3.514539 GGTCGGGTTATATCTAAGGGGT 58.485 50.000 0.00 0.00 0.00 4.95
320 326 2.836372 GGGTCGGGTTATATCTAAGGGG 59.164 54.545 0.00 0.00 0.00 4.79
321 327 3.513517 TGGGTCGGGTTATATCTAAGGG 58.486 50.000 0.00 0.00 0.00 3.95
322 328 5.757099 AATGGGTCGGGTTATATCTAAGG 57.243 43.478 0.00 0.00 0.00 2.69
323 329 6.072673 GCAAAATGGGTCGGGTTATATCTAAG 60.073 42.308 0.00 0.00 0.00 2.18
324 330 5.766174 GCAAAATGGGTCGGGTTATATCTAA 59.234 40.000 0.00 0.00 0.00 2.10
325 331 5.310451 GCAAAATGGGTCGGGTTATATCTA 58.690 41.667 0.00 0.00 0.00 1.98
326 332 4.142038 GCAAAATGGGTCGGGTTATATCT 58.858 43.478 0.00 0.00 0.00 1.98
327 333 3.254903 GGCAAAATGGGTCGGGTTATATC 59.745 47.826 0.00 0.00 0.00 1.63
328 334 3.227614 GGCAAAATGGGTCGGGTTATAT 58.772 45.455 0.00 0.00 0.00 0.86
336 342 2.406616 CCGAGGGCAAAATGGGTCG 61.407 63.158 0.00 0.00 0.00 4.79
352 358 1.445582 GTACGCCTGAGAACCACCG 60.446 63.158 0.00 0.00 0.00 4.94
353 359 1.079336 GGTACGCCTGAGAACCACC 60.079 63.158 0.00 0.00 32.04 4.61
354 360 1.972978 AGGTACGCCTGAGAACCAC 59.027 57.895 0.00 0.00 45.05 4.16
355 361 4.533318 AGGTACGCCTGAGAACCA 57.467 55.556 0.00 0.00 45.05 3.67
365 371 2.295629 GTCAACTATAGGGGAGGTACGC 59.704 54.545 4.43 0.00 0.00 4.42
366 372 2.551459 CGTCAACTATAGGGGAGGTACG 59.449 54.545 4.43 0.92 0.00 3.67
375 381 9.186323 CAACTAGATTTGATCGTCAACTATAGG 57.814 37.037 16.28 0.00 36.08 2.57
376 382 9.952188 TCAACTAGATTTGATCGTCAACTATAG 57.048 33.333 0.00 13.14 37.08 1.31
388 394 3.270877 GTGGGCGTCAACTAGATTTGAT 58.729 45.455 0.00 0.00 37.80 2.57
408 414 4.033776 CCCCCGGCTGACACATGT 62.034 66.667 0.00 0.00 0.00 3.21
442 448 1.300963 GGATGGCCTGTCTTGCTCA 59.699 57.895 3.32 0.00 0.00 4.26
447 453 0.329596 GAACTGGGATGGCCTGTCTT 59.670 55.000 3.32 0.00 0.00 3.01
450 456 1.779061 AACGAACTGGGATGGCCTGT 61.779 55.000 3.32 0.00 0.00 4.00
451 457 1.002134 AACGAACTGGGATGGCCTG 60.002 57.895 3.32 0.00 0.00 4.85
452 458 1.002134 CAACGAACTGGGATGGCCT 60.002 57.895 3.32 0.00 0.00 5.19
455 461 1.875963 GCACAACGAACTGGGATGG 59.124 57.895 0.00 0.00 0.00 3.51
501 507 4.886247 AAAACCACGATGAAAAGAACGA 57.114 36.364 0.00 0.00 0.00 3.85
530 536 9.462606 AGAAAGAACCTGAAAGAACTAGAAAAA 57.537 29.630 0.00 0.00 34.07 1.94
600 613 6.680874 AAAAACATGTTCACGGTGTACTAA 57.319 33.333 12.39 0.67 0.00 2.24
603 616 6.129300 GCATTAAAAACATGTTCACGGTGTAC 60.129 38.462 12.39 10.53 0.00 2.90
617 630 5.344743 TTGTTCCCTGTGCATTAAAAACA 57.655 34.783 0.00 0.00 0.00 2.83
618 631 6.481644 TGAATTGTTCCCTGTGCATTAAAAAC 59.518 34.615 0.00 0.00 0.00 2.43
762 795 9.474920 CACTTTACAAAAATGTGTTCACCATAT 57.525 29.630 0.37 0.00 32.75 1.78
763 796 7.923344 CCACTTTACAAAAATGTGTTCACCATA 59.077 33.333 0.37 0.00 32.75 2.74
764 797 6.760770 CCACTTTACAAAAATGTGTTCACCAT 59.239 34.615 0.37 0.00 32.75 3.55
765 798 6.071334 TCCACTTTACAAAAATGTGTTCACCA 60.071 34.615 0.37 0.00 32.75 4.17
767 800 7.820044 TTCCACTTTACAAAAATGTGTTCAC 57.180 32.000 0.00 0.00 32.75 3.18
768 801 8.833231 TTTTCCACTTTACAAAAATGTGTTCA 57.167 26.923 0.00 0.00 32.75 3.18
769 802 8.931775 ACTTTTCCACTTTACAAAAATGTGTTC 58.068 29.630 0.00 0.00 32.75 3.18
770 803 8.840833 ACTTTTCCACTTTACAAAAATGTGTT 57.159 26.923 0.00 0.00 32.75 3.32
772 805 9.753669 GAAACTTTTCCACTTTACAAAAATGTG 57.246 29.630 0.00 0.00 0.00 3.21
773 806 9.495572 TGAAACTTTTCCACTTTACAAAAATGT 57.504 25.926 0.00 0.00 36.36 2.71
893 931 6.128007 CCACTCTGGCGTGAGTTTTTATTATT 60.128 38.462 9.74 0.00 44.01 1.40
895 933 4.693566 CCACTCTGGCGTGAGTTTTTATTA 59.306 41.667 9.74 0.00 44.01 0.98
898 936 2.489971 CCACTCTGGCGTGAGTTTTTA 58.510 47.619 9.74 0.00 44.01 1.52
902 940 2.743718 CCCACTCTGGCGTGAGTT 59.256 61.111 9.74 0.00 44.01 3.01
933 971 1.146485 TTCGAACGTTTGGCCTCCA 59.854 52.632 15.50 0.00 0.00 3.86
934 972 0.883370 AGTTCGAACGTTTGGCCTCC 60.883 55.000 21.87 0.00 0.00 4.30
935 973 0.234884 CAGTTCGAACGTTTGGCCTC 59.765 55.000 21.87 4.33 0.00 4.70
936 974 1.164041 CCAGTTCGAACGTTTGGCCT 61.164 55.000 21.87 8.59 0.00 5.19
939 977 0.584876 GGTCCAGTTCGAACGTTTGG 59.415 55.000 22.69 22.69 0.00 3.28
940 978 0.231279 CGGTCCAGTTCGAACGTTTG 59.769 55.000 21.87 14.76 38.17 2.93
941 979 0.877213 CCGGTCCAGTTCGAACGTTT 60.877 55.000 21.87 2.48 41.45 3.60
1128 1198 4.441695 CAGCGCGGCAGAGGAAGA 62.442 66.667 8.83 0.00 0.00 2.87
1249 1319 3.059982 CGAAGGGAGGTGTGCAGA 58.940 61.111 0.00 0.00 0.00 4.26
1272 1342 0.175760 GGAGAGATGTGCAGCGGTTA 59.824 55.000 0.00 0.00 0.00 2.85
1332 1402 0.666577 CGGTGGAGAAGACGGTCAAC 60.667 60.000 11.27 3.82 0.00 3.18
1333 1403 1.111116 ACGGTGGAGAAGACGGTCAA 61.111 55.000 11.27 0.00 0.00 3.18
1335 1405 1.080705 CACGGTGGAGAAGACGGTC 60.081 63.158 0.00 0.00 0.00 4.79
1336 1406 3.048602 CACGGTGGAGAAGACGGT 58.951 61.111 0.00 0.00 0.00 4.83
1337 1407 2.432628 GCACGGTGGAGAAGACGG 60.433 66.667 10.60 0.00 0.00 4.79
1338 1408 2.432628 GGCACGGTGGAGAAGACG 60.433 66.667 10.60 0.00 0.00 4.18
1491 1564 6.100004 ACAATTCGACATACAGAACCAGTAG 58.900 40.000 0.00 0.00 0.00 2.57
1508 1581 6.592994 AGCATCCATGTATCATCTACAATTCG 59.407 38.462 0.00 0.00 0.00 3.34
1530 1746 3.814625 TGTATGAACAACAGACCAAGCA 58.185 40.909 0.00 0.00 39.64 3.91
1531 1747 4.379813 CCATGTATGAACAACAGACCAAGC 60.380 45.833 0.00 0.00 39.64 4.01
1532 1748 5.003160 TCCATGTATGAACAACAGACCAAG 58.997 41.667 0.00 0.00 39.64 3.61
1533 1749 4.979335 TCCATGTATGAACAACAGACCAA 58.021 39.130 0.00 0.00 39.64 3.67
1534 1750 4.632327 TCCATGTATGAACAACAGACCA 57.368 40.909 0.00 0.00 39.64 4.02
1535 1751 4.201950 GCATCCATGTATGAACAACAGACC 60.202 45.833 1.88 0.00 39.64 3.85
1536 1752 4.637534 AGCATCCATGTATGAACAACAGAC 59.362 41.667 1.88 0.00 39.58 3.51
1537 1753 4.847198 AGCATCCATGTATGAACAACAGA 58.153 39.130 1.88 0.00 39.58 3.41
1538 1754 5.571784 AAGCATCCATGTATGAACAACAG 57.428 39.130 1.88 0.00 39.58 3.16
1539 1755 5.243507 ACAAAGCATCCATGTATGAACAACA 59.756 36.000 1.88 0.00 39.58 3.33
1540 1756 5.574055 CACAAAGCATCCATGTATGAACAAC 59.426 40.000 1.88 0.00 39.58 3.32
1541 1757 5.243507 ACACAAAGCATCCATGTATGAACAA 59.756 36.000 1.88 0.00 39.58 2.83
1542 1758 4.766373 ACACAAAGCATCCATGTATGAACA 59.234 37.500 1.88 0.00 40.69 3.18
1543 1759 5.097529 CACACAAAGCATCCATGTATGAAC 58.902 41.667 1.88 0.00 0.00 3.18
1544 1760 4.766373 ACACACAAAGCATCCATGTATGAA 59.234 37.500 1.88 0.00 0.00 2.57
1545 1761 4.156373 CACACACAAAGCATCCATGTATGA 59.844 41.667 1.88 0.00 0.00 2.15
1546 1762 4.082625 ACACACACAAAGCATCCATGTATG 60.083 41.667 0.00 0.00 0.00 2.39
1547 1763 4.081406 ACACACACAAAGCATCCATGTAT 58.919 39.130 0.00 0.00 0.00 2.29
1548 1764 3.252944 CACACACACAAAGCATCCATGTA 59.747 43.478 0.00 0.00 0.00 2.29
1549 1765 2.034939 CACACACACAAAGCATCCATGT 59.965 45.455 0.00 0.00 0.00 3.21
1550 1766 2.668250 CACACACACAAAGCATCCATG 58.332 47.619 0.00 0.00 0.00 3.66
1551 1767 1.000060 GCACACACACAAAGCATCCAT 60.000 47.619 0.00 0.00 0.00 3.41
1552 1768 0.385029 GCACACACACAAAGCATCCA 59.615 50.000 0.00 0.00 0.00 3.41
1553 1769 0.670162 AGCACACACACAAAGCATCC 59.330 50.000 0.00 0.00 0.00 3.51
1554 1770 1.066002 ACAGCACACACACAAAGCATC 59.934 47.619 0.00 0.00 0.00 3.91
1555 1771 1.066002 GACAGCACACACACAAAGCAT 59.934 47.619 0.00 0.00 0.00 3.79
1556 1772 0.451383 GACAGCACACACACAAAGCA 59.549 50.000 0.00 0.00 0.00 3.91
1557 1773 0.451383 TGACAGCACACACACAAAGC 59.549 50.000 0.00 0.00 0.00 3.51
1558 1774 2.917701 TTGACAGCACACACACAAAG 57.082 45.000 0.00 0.00 0.00 2.77
1559 1775 3.865011 AATTGACAGCACACACACAAA 57.135 38.095 0.00 0.00 0.00 2.83
1560 1776 4.261530 CCATAATTGACAGCACACACACAA 60.262 41.667 0.00 0.00 0.00 3.33
1561 1777 3.252944 CCATAATTGACAGCACACACACA 59.747 43.478 0.00 0.00 0.00 3.72
1562 1778 3.253188 ACCATAATTGACAGCACACACAC 59.747 43.478 0.00 0.00 0.00 3.82
1563 1779 3.485394 ACCATAATTGACAGCACACACA 58.515 40.909 0.00 0.00 0.00 3.72
1564 1780 4.503741 AACCATAATTGACAGCACACAC 57.496 40.909 0.00 0.00 0.00 3.82
1565 1781 4.826733 AGAAACCATAATTGACAGCACACA 59.173 37.500 0.00 0.00 0.00 3.72
1566 1782 5.156355 CAGAAACCATAATTGACAGCACAC 58.844 41.667 0.00 0.00 0.00 3.82
1567 1783 4.321156 GCAGAAACCATAATTGACAGCACA 60.321 41.667 0.00 0.00 0.00 4.57
1568 1784 4.168760 GCAGAAACCATAATTGACAGCAC 58.831 43.478 0.00 0.00 0.00 4.40
1569 1785 3.193267 GGCAGAAACCATAATTGACAGCA 59.807 43.478 0.00 0.00 0.00 4.41
1570 1786 3.731867 CGGCAGAAACCATAATTGACAGC 60.732 47.826 0.00 0.00 0.00 4.40
1571 1787 3.689161 TCGGCAGAAACCATAATTGACAG 59.311 43.478 0.00 0.00 0.00 3.51
1572 1788 3.680490 TCGGCAGAAACCATAATTGACA 58.320 40.909 0.00 0.00 0.00 3.58
1573 1789 4.695217 TTCGGCAGAAACCATAATTGAC 57.305 40.909 0.00 0.00 32.65 3.18
1574 1790 5.465935 GTTTTCGGCAGAAACCATAATTGA 58.534 37.500 11.74 0.00 45.11 2.57
1575 1791 4.625311 GGTTTTCGGCAGAAACCATAATTG 59.375 41.667 20.60 0.00 45.11 2.32
1576 1792 4.282195 TGGTTTTCGGCAGAAACCATAATT 59.718 37.500 23.00 0.00 45.11 1.40
1577 1793 3.829601 TGGTTTTCGGCAGAAACCATAAT 59.170 39.130 23.00 0.00 45.11 1.28
1578 1794 3.223435 TGGTTTTCGGCAGAAACCATAA 58.777 40.909 23.00 7.81 45.11 1.90
1579 1795 2.865079 TGGTTTTCGGCAGAAACCATA 58.135 42.857 23.00 8.37 45.11 2.74
1580 1796 1.698506 TGGTTTTCGGCAGAAACCAT 58.301 45.000 23.00 0.00 45.11 3.55
1581 1797 1.407258 CTTGGTTTTCGGCAGAAACCA 59.593 47.619 23.00 23.00 45.11 3.67
1582 1798 1.868109 GCTTGGTTTTCGGCAGAAACC 60.868 52.381 19.37 19.37 45.11 3.27
1583 1799 1.067060 AGCTTGGTTTTCGGCAGAAAC 59.933 47.619 11.74 7.32 45.11 2.78
1584 1800 1.066908 CAGCTTGGTTTTCGGCAGAAA 59.933 47.619 8.00 8.00 43.91 2.52
1585 1801 0.667993 CAGCTTGGTTTTCGGCAGAA 59.332 50.000 0.00 0.00 33.98 3.02
1586 1802 0.179032 TCAGCTTGGTTTTCGGCAGA 60.179 50.000 0.00 0.00 0.00 4.26
1587 1803 0.667993 TTCAGCTTGGTTTTCGGCAG 59.332 50.000 0.00 0.00 0.00 4.85
1588 1804 1.327303 ATTCAGCTTGGTTTTCGGCA 58.673 45.000 0.00 0.00 0.00 5.69
1589 1805 2.328473 GAATTCAGCTTGGTTTTCGGC 58.672 47.619 0.00 0.00 0.00 5.54
1590 1806 2.558359 AGGAATTCAGCTTGGTTTTCGG 59.442 45.455 7.93 0.00 0.00 4.30
1591 1807 3.667960 CGAGGAATTCAGCTTGGTTTTCG 60.668 47.826 7.93 0.00 0.00 3.46
1592 1808 3.366374 CCGAGGAATTCAGCTTGGTTTTC 60.366 47.826 7.93 0.00 0.00 2.29
1593 1809 2.558359 CCGAGGAATTCAGCTTGGTTTT 59.442 45.455 7.93 0.00 0.00 2.43
1594 1810 2.162681 CCGAGGAATTCAGCTTGGTTT 58.837 47.619 7.93 0.00 0.00 3.27
1595 1811 1.073923 ACCGAGGAATTCAGCTTGGTT 59.926 47.619 14.71 3.78 29.81 3.67
1596 1812 0.693049 ACCGAGGAATTCAGCTTGGT 59.307 50.000 14.71 14.71 0.00 3.67
1597 1813 1.826385 AACCGAGGAATTCAGCTTGG 58.174 50.000 13.68 13.68 0.00 3.61
1598 1814 4.003648 AGTTAACCGAGGAATTCAGCTTG 58.996 43.478 7.93 0.09 0.00 4.01
1599 1815 4.003648 CAGTTAACCGAGGAATTCAGCTT 58.996 43.478 7.93 0.00 0.00 3.74
1600 1816 3.260884 TCAGTTAACCGAGGAATTCAGCT 59.739 43.478 7.93 0.00 0.00 4.24
1601 1817 3.596214 TCAGTTAACCGAGGAATTCAGC 58.404 45.455 7.93 0.00 0.00 4.26
1602 1818 6.149474 ACATTTCAGTTAACCGAGGAATTCAG 59.851 38.462 7.93 0.00 0.00 3.02
1603 1819 6.001460 ACATTTCAGTTAACCGAGGAATTCA 58.999 36.000 7.93 0.00 0.00 2.57
1604 1820 6.496338 ACATTTCAGTTAACCGAGGAATTC 57.504 37.500 0.88 0.00 0.00 2.17
1605 1821 5.121768 CGACATTTCAGTTAACCGAGGAATT 59.878 40.000 0.88 0.00 0.00 2.17
1606 1822 4.630069 CGACATTTCAGTTAACCGAGGAAT 59.370 41.667 0.88 0.00 0.00 3.01
1607 1823 3.991773 CGACATTTCAGTTAACCGAGGAA 59.008 43.478 0.88 0.00 0.00 3.36
1608 1824 3.581755 CGACATTTCAGTTAACCGAGGA 58.418 45.455 0.88 0.00 0.00 3.71
1609 1825 2.671396 CCGACATTTCAGTTAACCGAGG 59.329 50.000 0.88 0.00 0.00 4.63
1610 1826 3.323243 ACCGACATTTCAGTTAACCGAG 58.677 45.455 0.88 0.00 0.00 4.63
1611 1827 3.389925 ACCGACATTTCAGTTAACCGA 57.610 42.857 0.88 0.00 0.00 4.69
1612 1828 4.477302 AAACCGACATTTCAGTTAACCG 57.523 40.909 0.88 0.00 0.00 4.44
1613 1829 5.684184 GTGAAAACCGACATTTCAGTTAACC 59.316 40.000 0.88 0.00 44.81 2.85
1614 1830 6.492254 AGTGAAAACCGACATTTCAGTTAAC 58.508 36.000 9.49 0.00 44.14 2.01
1615 1831 6.687081 AGTGAAAACCGACATTTCAGTTAA 57.313 33.333 9.49 0.00 44.14 2.01
1618 1834 5.576447 AAAGTGAAAACCGACATTTCAGT 57.424 34.783 9.49 9.90 46.91 3.41
1619 1835 6.529829 TCAAAAAGTGAAAACCGACATTTCAG 59.470 34.615 9.49 0.70 44.81 3.02
1620 1836 6.309251 GTCAAAAAGTGAAAACCGACATTTCA 59.691 34.615 6.25 6.25 42.73 2.69
1621 1837 6.530181 AGTCAAAAAGTGAAAACCGACATTTC 59.470 34.615 0.00 0.00 38.23 2.17
1622 1838 6.310224 CAGTCAAAAAGTGAAAACCGACATTT 59.690 34.615 0.00 0.00 38.23 2.32
1623 1839 5.804979 CAGTCAAAAAGTGAAAACCGACATT 59.195 36.000 0.00 0.00 38.23 2.71
1624 1840 5.339990 CAGTCAAAAAGTGAAAACCGACAT 58.660 37.500 0.00 0.00 38.23 3.06
1625 1841 4.728534 CAGTCAAAAAGTGAAAACCGACA 58.271 39.130 0.00 0.00 38.23 4.35
1626 1842 3.546271 GCAGTCAAAAAGTGAAAACCGAC 59.454 43.478 0.00 0.00 38.23 4.79
1627 1843 3.428316 GGCAGTCAAAAAGTGAAAACCGA 60.428 43.478 0.00 0.00 38.23 4.69
1628 1844 2.857748 GGCAGTCAAAAAGTGAAAACCG 59.142 45.455 0.00 0.00 38.23 4.44
1629 1845 4.123497 AGGCAGTCAAAAAGTGAAAACC 57.877 40.909 0.00 0.00 38.23 3.27
1630 1846 7.491048 TGAATTAGGCAGTCAAAAAGTGAAAAC 59.509 33.333 0.00 0.00 38.23 2.43
1631 1847 7.551585 TGAATTAGGCAGTCAAAAAGTGAAAA 58.448 30.769 0.00 0.00 38.23 2.29
1632 1848 7.106439 TGAATTAGGCAGTCAAAAAGTGAAA 57.894 32.000 0.00 0.00 38.23 2.69
1633 1849 6.321181 ACTGAATTAGGCAGTCAAAAAGTGAA 59.679 34.615 0.00 0.00 42.62 3.18
1634 1850 5.827797 ACTGAATTAGGCAGTCAAAAAGTGA 59.172 36.000 0.00 0.00 42.62 3.41
1635 1851 6.076981 ACTGAATTAGGCAGTCAAAAAGTG 57.923 37.500 0.00 0.00 42.62 3.16
1636 1852 6.715347 AACTGAATTAGGCAGTCAAAAAGT 57.285 33.333 0.00 0.00 45.27 2.66
1637 1853 7.084486 GGTAACTGAATTAGGCAGTCAAAAAG 58.916 38.462 0.00 0.00 45.27 2.27
1638 1854 6.547880 TGGTAACTGAATTAGGCAGTCAAAAA 59.452 34.615 0.00 0.00 45.27 1.94
1639 1855 6.016610 GTGGTAACTGAATTAGGCAGTCAAAA 60.017 38.462 0.00 0.00 45.27 2.44
1640 1856 5.472137 GTGGTAACTGAATTAGGCAGTCAAA 59.528 40.000 0.00 0.00 45.27 2.69
1641 1857 5.001232 GTGGTAACTGAATTAGGCAGTCAA 58.999 41.667 0.00 0.00 45.27 3.18
1642 1858 4.041075 TGTGGTAACTGAATTAGGCAGTCA 59.959 41.667 0.00 0.00 45.27 3.41
1643 1859 4.575885 TGTGGTAACTGAATTAGGCAGTC 58.424 43.478 0.00 0.00 45.27 3.51
1645 1861 5.237344 GCTATGTGGTAACTGAATTAGGCAG 59.763 44.000 0.00 0.00 39.26 4.85
1646 1862 5.123227 GCTATGTGGTAACTGAATTAGGCA 58.877 41.667 0.00 0.00 37.61 4.75
1647 1863 5.007724 GTGCTATGTGGTAACTGAATTAGGC 59.992 44.000 0.00 0.00 37.61 3.93
1648 1864 6.349300 AGTGCTATGTGGTAACTGAATTAGG 58.651 40.000 0.00 0.00 37.61 2.69
1649 1865 8.818057 GTTAGTGCTATGTGGTAACTGAATTAG 58.182 37.037 0.00 0.00 37.61 1.73
1650 1866 8.537016 AGTTAGTGCTATGTGGTAACTGAATTA 58.463 33.333 0.00 0.00 33.64 1.40
1651 1867 7.394816 AGTTAGTGCTATGTGGTAACTGAATT 58.605 34.615 0.00 0.00 33.64 2.17
1652 1868 6.947464 AGTTAGTGCTATGTGGTAACTGAAT 58.053 36.000 0.00 0.00 33.64 2.57
1653 1869 6.354794 AGTTAGTGCTATGTGGTAACTGAA 57.645 37.500 0.00 0.00 33.64 3.02
1654 1870 5.995565 AGTTAGTGCTATGTGGTAACTGA 57.004 39.130 0.00 0.00 33.64 3.41
1655 1871 5.720202 TCAGTTAGTGCTATGTGGTAACTG 58.280 41.667 12.32 12.32 46.30 3.16
1656 1872 5.995565 TCAGTTAGTGCTATGTGGTAACT 57.004 39.130 0.00 0.00 34.90 2.24
1657 1873 7.611213 AATTCAGTTAGTGCTATGTGGTAAC 57.389 36.000 0.00 0.00 0.00 2.50
1658 1874 7.880713 TGAAATTCAGTTAGTGCTATGTGGTAA 59.119 33.333 0.00 0.00 0.00 2.85
1659 1875 7.390823 TGAAATTCAGTTAGTGCTATGTGGTA 58.609 34.615 0.00 0.00 0.00 3.25
1660 1876 6.237901 TGAAATTCAGTTAGTGCTATGTGGT 58.762 36.000 0.00 0.00 0.00 4.16
1661 1877 6.741992 TGAAATTCAGTTAGTGCTATGTGG 57.258 37.500 0.00 0.00 0.00 4.17
1662 1878 9.630098 ATTTTGAAATTCAGTTAGTGCTATGTG 57.370 29.630 0.00 0.00 0.00 3.21
1667 1883 9.476202 GGTTTATTTTGAAATTCAGTTAGTGCT 57.524 29.630 0.00 0.00 0.00 4.40
1668 1884 8.424731 CGGTTTATTTTGAAATTCAGTTAGTGC 58.575 33.333 0.00 0.00 0.00 4.40
1669 1885 9.672086 TCGGTTTATTTTGAAATTCAGTTAGTG 57.328 29.630 0.00 0.00 0.00 2.74
1674 1890 9.541143 ACAATTCGGTTTATTTTGAAATTCAGT 57.459 25.926 0.00 0.00 0.00 3.41
1745 1962 4.835927 CGATGAGGACGGAAAGGG 57.164 61.111 0.00 0.00 0.00 3.95
1794 2012 1.206371 GCTAGGACCTACTTTTCGGCA 59.794 52.381 0.00 0.00 0.00 5.69
1805 2023 0.413832 TGAACTCCCAGCTAGGACCT 59.586 55.000 0.00 0.00 41.22 3.85
1819 2037 0.109342 CTGACCCCAGTGCTTGAACT 59.891 55.000 0.00 0.00 35.70 3.01
1824 2042 1.763770 CTTCCTGACCCCAGTGCTT 59.236 57.895 0.00 0.00 38.74 3.91
1830 2048 2.231380 GCTTCCCTTCCTGACCCCA 61.231 63.158 0.00 0.00 0.00 4.96
1837 2055 3.775654 CGCCTCGCTTCCCTTCCT 61.776 66.667 0.00 0.00 0.00 3.36
1847 2065 2.510238 ATTGACAGCTCGCCTCGC 60.510 61.111 0.00 0.00 0.00 5.03
1931 2149 2.055299 GGAGTTGAGGTCGTCCCAA 58.945 57.895 0.00 0.00 34.66 4.12
2100 2327 5.745227 TCACTAGATTTCTCAAACCCCATC 58.255 41.667 0.00 0.00 0.00 3.51
2122 2349 5.127356 ACTGAAGCTACTGTAACCACCTATC 59.873 44.000 0.00 0.00 0.00 2.08
2428 2797 5.347342 ACTCAAAACAATTTCATCGCACAA 58.653 33.333 0.00 0.00 0.00 3.33
2438 2809 8.663911 CATTGTAACACCAACTCAAAACAATTT 58.336 29.630 0.00 0.00 34.91 1.82
2477 2852 0.901124 CCACTGAACTCCTCCCTGAG 59.099 60.000 0.00 0.00 38.37 3.35
2822 3197 4.346734 CCATATACGAGATGGCAAATGC 57.653 45.455 0.00 0.00 37.64 3.56
3168 6749 7.265673 ACGAAAGATAAGAATCGAGATTTGGA 58.734 34.615 0.64 0.00 38.59 3.53
3364 6945 3.815856 TTGCACTGCAAAATGAGGAAA 57.184 38.095 14.21 0.00 45.96 3.13
3423 7004 0.968393 ACACCAACACACACCCAACC 60.968 55.000 0.00 0.00 0.00 3.77
3437 7018 3.632333 CTCCAGATAGTAGGACACACCA 58.368 50.000 0.00 0.00 42.04 4.17
3438 7019 2.362717 GCTCCAGATAGTAGGACACACC 59.637 54.545 0.00 0.00 39.35 4.16
3439 7020 2.362717 GGCTCCAGATAGTAGGACACAC 59.637 54.545 0.00 0.00 0.00 3.82
3440 7021 2.245028 AGGCTCCAGATAGTAGGACACA 59.755 50.000 0.00 0.00 0.00 3.72
3441 7022 2.952116 AGGCTCCAGATAGTAGGACAC 58.048 52.381 0.00 0.00 0.00 3.67
3442 7023 3.689872 AAGGCTCCAGATAGTAGGACA 57.310 47.619 0.00 0.00 0.00 4.02
3443 7024 6.153170 GGTAATAAGGCTCCAGATAGTAGGAC 59.847 46.154 0.00 0.00 0.00 3.85
3444 7025 6.254522 GGTAATAAGGCTCCAGATAGTAGGA 58.745 44.000 0.00 0.00 0.00 2.94
3454 7035 2.840511 TGTCTGGGTAATAAGGCTCCA 58.159 47.619 0.00 0.00 0.00 3.86
3462 7045 6.508030 TGCCTTCAATATGTCTGGGTAATA 57.492 37.500 0.00 0.00 0.00 0.98
3476 7059 9.193806 AGTAGATCAAAATACAATGCCTTCAAT 57.806 29.630 0.00 0.00 0.00 2.57
3537 7122 8.791429 TTTGTCAGCAATTGGGAAACCTGAAC 62.791 42.308 7.72 6.03 42.47 3.18
3565 7156 5.243426 TCCGTAAAATAATTCCAGCTTGC 57.757 39.130 0.00 0.00 0.00 4.01
3579 7175 5.278561 CCACAAGCTAAATGGTTCCGTAAAA 60.279 40.000 3.20 0.00 33.63 1.52
3585 7181 1.892474 TGCCACAAGCTAAATGGTTCC 59.108 47.619 11.36 0.00 44.23 3.62
3591 7187 4.281688 ACAGAACATTGCCACAAGCTAAAT 59.718 37.500 0.00 0.00 44.23 1.40
3602 7198 1.873591 ACAACGAGACAGAACATTGCC 59.126 47.619 0.00 0.00 0.00 4.52
3612 7241 4.038763 AGACTTTGACCATACAACGAGACA 59.961 41.667 0.00 0.00 0.00 3.41
3659 7290 4.520111 AGTTGCAGCACATCAATAGTTTGA 59.480 37.500 2.55 0.00 45.57 2.69
3660 7291 4.801891 AGTTGCAGCACATCAATAGTTTG 58.198 39.130 2.55 0.00 0.00 2.93
3661 7292 5.458041 AAGTTGCAGCACATCAATAGTTT 57.542 34.783 2.55 0.00 0.00 2.66
3672 7303 2.618709 AGACCACTTTAAGTTGCAGCAC 59.381 45.455 2.55 0.00 0.00 4.40
3702 7333 4.124851 ACTACAGTATTTCCTCAAGGCG 57.875 45.455 0.00 0.00 34.44 5.52
3709 7340 7.793948 ACTTCCAGTAACTACAGTATTTCCT 57.206 36.000 0.00 0.00 0.00 3.36
3739 7370 1.784062 CACAGTAGCAGCTTCGCAC 59.216 57.895 0.00 0.00 0.00 5.34
3740 7371 2.029288 GCACAGTAGCAGCTTCGCA 61.029 57.895 0.00 0.00 0.00 5.10
3741 7372 2.781300 GCACAGTAGCAGCTTCGC 59.219 61.111 0.00 0.00 0.00 4.70
3742 7373 2.447887 CCGCACAGTAGCAGCTTCG 61.448 63.158 0.00 0.00 0.00 3.79
3743 7374 1.079819 TCCGCACAGTAGCAGCTTC 60.080 57.895 0.00 0.00 0.00 3.86
3744 7375 1.374758 GTCCGCACAGTAGCAGCTT 60.375 57.895 0.00 0.00 0.00 3.74
3745 7376 0.965866 TAGTCCGCACAGTAGCAGCT 60.966 55.000 0.00 0.00 0.00 4.24
3746 7377 0.103208 ATAGTCCGCACAGTAGCAGC 59.897 55.000 0.00 0.00 0.00 5.25
3747 7378 2.586258 AATAGTCCGCACAGTAGCAG 57.414 50.000 0.00 0.00 0.00 4.24
3748 7379 3.634910 TCATAATAGTCCGCACAGTAGCA 59.365 43.478 0.00 0.00 0.00 3.49
3749 7380 3.982058 GTCATAATAGTCCGCACAGTAGC 59.018 47.826 0.00 0.00 0.00 3.58
3750 7381 4.278669 AGGTCATAATAGTCCGCACAGTAG 59.721 45.833 0.00 0.00 0.00 2.57
3751 7382 4.212716 AGGTCATAATAGTCCGCACAGTA 58.787 43.478 0.00 0.00 0.00 2.74
3752 7383 3.031736 AGGTCATAATAGTCCGCACAGT 58.968 45.455 0.00 0.00 0.00 3.55
3753 7384 3.735237 AGGTCATAATAGTCCGCACAG 57.265 47.619 0.00 0.00 0.00 3.66
3754 7385 3.005472 GCTAGGTCATAATAGTCCGCACA 59.995 47.826 0.00 0.00 0.00 4.57
3755 7386 3.256136 AGCTAGGTCATAATAGTCCGCAC 59.744 47.826 0.00 0.00 0.00 5.34
3756 7387 3.497332 AGCTAGGTCATAATAGTCCGCA 58.503 45.455 0.00 0.00 0.00 5.69
3757 7388 4.522722 AAGCTAGGTCATAATAGTCCGC 57.477 45.455 0.00 0.00 0.00 5.54
3758 7389 4.686554 GCAAAGCTAGGTCATAATAGTCCG 59.313 45.833 0.00 0.00 0.00 4.79
3759 7390 5.859495 AGCAAAGCTAGGTCATAATAGTCC 58.141 41.667 0.00 0.00 36.99 3.85
3760 7391 5.631512 CGAGCAAAGCTAGGTCATAATAGTC 59.368 44.000 15.75 0.00 39.88 2.59
3761 7392 5.069251 ACGAGCAAAGCTAGGTCATAATAGT 59.931 40.000 15.75 4.53 39.88 2.12
3762 7393 5.533482 ACGAGCAAAGCTAGGTCATAATAG 58.467 41.667 15.75 4.03 39.88 1.73
3763 7394 5.531122 ACGAGCAAAGCTAGGTCATAATA 57.469 39.130 15.75 0.00 39.88 0.98
3764 7395 4.408182 ACGAGCAAAGCTAGGTCATAAT 57.592 40.909 15.75 0.00 39.88 1.28
3765 7396 3.887621 ACGAGCAAAGCTAGGTCATAA 57.112 42.857 15.75 0.00 39.88 1.90
3766 7397 3.887621 AACGAGCAAAGCTAGGTCATA 57.112 42.857 15.75 0.00 39.88 2.15
3767 7398 2.744202 CAAACGAGCAAAGCTAGGTCAT 59.256 45.455 15.75 0.89 39.88 3.06
3768 7399 2.143122 CAAACGAGCAAAGCTAGGTCA 58.857 47.619 15.75 0.00 39.88 4.02
3769 7400 2.157863 GTCAAACGAGCAAAGCTAGGTC 59.842 50.000 7.92 7.92 39.88 3.85
3770 7401 2.143925 GTCAAACGAGCAAAGCTAGGT 58.856 47.619 4.25 0.00 39.88 3.08
3771 7402 1.464997 GGTCAAACGAGCAAAGCTAGG 59.535 52.381 4.25 0.00 39.88 3.02
3772 7403 1.464997 GGGTCAAACGAGCAAAGCTAG 59.535 52.381 0.00 0.00 39.88 3.42
3773 7404 1.071699 AGGGTCAAACGAGCAAAGCTA 59.928 47.619 0.00 0.00 39.88 3.32
3783 7414 2.286772 CCGAGAACAAAAGGGTCAAACG 60.287 50.000 0.00 0.00 0.00 3.60
3784 7415 2.686405 ACCGAGAACAAAAGGGTCAAAC 59.314 45.455 0.00 0.00 0.00 2.93
3803 7434 9.490379 CCAGGACTGATATAGTTACATAAAACC 57.510 37.037 0.00 0.00 40.53 3.27
3816 7447 5.604231 ACTTGCAATCTCCAGGACTGATATA 59.396 40.000 0.00 0.00 0.00 0.86
3817 7448 4.411540 ACTTGCAATCTCCAGGACTGATAT 59.588 41.667 0.00 0.00 0.00 1.63
3874 7662 6.750148 TCCGTAATTTGGCATTTACAAGTTT 58.250 32.000 16.39 0.00 31.53 2.66
3876 7664 5.968528 TCCGTAATTTGGCATTTACAAGT 57.031 34.783 16.39 0.00 0.00 3.16
3877 7665 6.811170 ACATTCCGTAATTTGGCATTTACAAG 59.189 34.615 16.39 9.80 0.00 3.16
3881 7669 6.516739 TCACATTCCGTAATTTGGCATTTA 57.483 33.333 0.00 0.00 0.00 1.40
3882 7670 5.398603 TCACATTCCGTAATTTGGCATTT 57.601 34.783 0.00 0.00 0.00 2.32
3884 7672 5.350633 CATTCACATTCCGTAATTTGGCAT 58.649 37.500 0.00 0.00 0.00 4.40
3885 7673 4.381398 CCATTCACATTCCGTAATTTGGCA 60.381 41.667 0.00 0.00 0.00 4.92
3886 7674 4.111916 CCATTCACATTCCGTAATTTGGC 58.888 43.478 0.00 0.00 0.00 4.52
3887 7675 5.105957 TGTCCATTCACATTCCGTAATTTGG 60.106 40.000 0.00 0.00 0.00 3.28
3895 7696 4.622313 CACAATTTGTCCATTCACATTCCG 59.378 41.667 0.00 0.00 0.00 4.30
3896 7697 4.389687 GCACAATTTGTCCATTCACATTCC 59.610 41.667 0.00 0.00 0.00 3.01
3899 7700 4.561938 CCAGCACAATTTGTCCATTCACAT 60.562 41.667 0.00 0.00 0.00 3.21
3902 7703 2.299582 CCCAGCACAATTTGTCCATTCA 59.700 45.455 0.00 0.00 0.00 2.57
3909 7710 3.299503 AGAGAAACCCAGCACAATTTGT 58.700 40.909 0.00 0.00 0.00 2.83
3945 7746 1.889170 GGCAAGGGTTTCTTCTCTTGG 59.111 52.381 8.13 0.00 37.61 3.61
3947 7748 1.897560 CGGCAAGGGTTTCTTCTCTT 58.102 50.000 0.00 0.00 32.41 2.85
3948 7749 0.606673 GCGGCAAGGGTTTCTTCTCT 60.607 55.000 0.00 0.00 32.41 3.10
3949 7750 1.876664 GCGGCAAGGGTTTCTTCTC 59.123 57.895 0.00 0.00 32.41 2.87
3950 7751 1.966451 CGCGGCAAGGGTTTCTTCT 60.966 57.895 0.00 0.00 32.41 2.85
3952 7753 2.983592 CCGCGGCAAGGGTTTCTT 60.984 61.111 14.67 0.00 35.79 2.52
3984 7791 7.936847 TCAGTATACCACAGAACAACATTTTCT 59.063 33.333 0.00 0.00 33.38 2.52
3985 7792 8.094798 TCAGTATACCACAGAACAACATTTTC 57.905 34.615 0.00 0.00 0.00 2.29
3991 7798 7.277981 CCAGTTATCAGTATACCACAGAACAAC 59.722 40.741 0.00 3.16 0.00 3.32
3993 7800 6.439375 ACCAGTTATCAGTATACCACAGAACA 59.561 38.462 0.00 0.00 0.00 3.18
3996 7803 6.192044 TGACCAGTTATCAGTATACCACAGA 58.808 40.000 0.00 0.00 0.00 3.41
3999 7806 6.534079 GTGTTGACCAGTTATCAGTATACCAC 59.466 42.308 0.00 0.00 0.00 4.16
4000 7807 6.439375 AGTGTTGACCAGTTATCAGTATACCA 59.561 38.462 0.00 0.00 0.00 3.25
4001 7808 6.875076 AGTGTTGACCAGTTATCAGTATACC 58.125 40.000 0.00 0.00 0.00 2.73
4002 7809 7.544622 TGAGTGTTGACCAGTTATCAGTATAC 58.455 38.462 0.00 0.00 0.00 1.47
4014 7863 0.947244 GCCAGTTGAGTGTTGACCAG 59.053 55.000 0.00 0.00 0.00 4.00
4038 7887 3.558931 TGAGCAGTTTCTCTTTCACCA 57.441 42.857 0.00 0.00 34.29 4.17
4055 7904 5.739752 TTGCGTTCCATCTGAATTATGAG 57.260 39.130 0.00 0.00 34.90 2.90
4088 7937 4.416620 TGGAAACAATTTGAACACACGAC 58.583 39.130 2.79 0.00 37.44 4.34
4121 7970 4.987832 AGCATCTACTCTACGAAACACAG 58.012 43.478 0.00 0.00 0.00 3.66
4137 7989 1.251527 ACCAGGAACGACGAGCATCT 61.252 55.000 0.00 0.00 0.00 2.90
4149 8001 4.065088 CGAGAGAAAAATGTGACCAGGAA 58.935 43.478 0.00 0.00 0.00 3.36
4201 8054 0.744874 TGGTCGATCCAGATCCGAAC 59.255 55.000 0.00 6.38 41.93 3.95
4726 8582 1.222387 GTACCCCGCTAACATGGCA 59.778 57.895 0.00 0.00 0.00 4.92
4786 8642 2.280119 TCGTGATGCGGCATAGCC 60.280 61.111 16.66 4.24 46.75 3.93
4798 8654 3.053842 AGTTATAGGAGGTGAGGTCGTGA 60.054 47.826 0.00 0.00 0.00 4.35
4800 8656 3.202595 AGAGTTATAGGAGGTGAGGTCGT 59.797 47.826 0.00 0.00 0.00 4.34
4809 8665 5.477510 CAAGCATAGCAGAGTTATAGGAGG 58.522 45.833 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.