Multiple sequence alignment - TraesCS1B01G225000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G225000 chr1B 100.000 6062 0 0 1 6062 403583209 403577148 0.000000e+00 11195.0
1 TraesCS1B01G225000 chr1B 89.724 905 69 7 1250 2130 403541382 403542286 0.000000e+00 1134.0
2 TraesCS1B01G225000 chr1B 89.426 889 76 10 4189 5062 403542869 403543754 0.000000e+00 1105.0
3 TraesCS1B01G225000 chr1B 89.732 224 23 0 3447 3670 8861597 8861374 2.760000e-73 287.0
4 TraesCS1B01G225000 chr1B 91.139 79 7 0 1062 1140 403541306 403541384 2.310000e-19 108.0
5 TraesCS1B01G225000 chr1A 90.548 2846 170 49 643 3443 373775122 373772331 0.000000e+00 3674.0
6 TraesCS1B01G225000 chr1A 91.461 1862 102 24 3716 5524 373772334 373770477 0.000000e+00 2505.0
7 TraesCS1B01G225000 chr1A 89.379 885 77 6 4195 5062 373767650 373768534 0.000000e+00 1098.0
8 TraesCS1B01G225000 chr1A 93.121 596 41 0 1535 2130 373766716 373767311 0.000000e+00 874.0
9 TraesCS1B01G225000 chr1A 81.555 553 62 14 5525 6059 373770348 373769818 2.610000e-113 420.0
10 TraesCS1B01G225000 chr1A 97.297 222 6 0 1250 1471 373766490 373766711 1.590000e-100 377.0
11 TraesCS1B01G225000 chr1A 85.714 84 10 2 451 533 376979977 376979895 3.010000e-13 87.9
12 TraesCS1B01G225000 chr1D 94.118 2023 79 19 610 2610 299585540 299583536 0.000000e+00 3040.0
13 TraesCS1B01G225000 chr1D 91.086 1391 77 20 4177 5525 299582478 299581093 0.000000e+00 1838.0
14 TraesCS1B01G225000 chr1D 90.122 901 69 7 1250 2130 299576214 299577114 0.000000e+00 1153.0
15 TraesCS1B01G225000 chr1D 89.450 891 77 11 4189 5062 299577470 299578360 0.000000e+00 1109.0
16 TraesCS1B01G225000 chr1D 93.496 615 36 3 4 617 299586550 299585939 0.000000e+00 911.0
17 TraesCS1B01G225000 chr1D 93.519 324 8 8 2714 3028 299583448 299583129 2.560000e-128 470.0
18 TraesCS1B01G225000 chr1D 82.609 299 32 12 5525 5821 299580976 299580696 4.690000e-61 246.0
19 TraesCS1B01G225000 chr1D 90.533 169 11 4 3731 3895 299582933 299582766 1.020000e-52 219.0
20 TraesCS1B01G225000 chr1D 81.988 161 13 8 5818 5963 299579864 299579705 8.250000e-24 122.0
21 TraesCS1B01G225000 chr1D 94.545 55 2 1 2651 2704 299583549 299583495 3.890000e-12 84.2
22 TraesCS1B01G225000 chr4B 83.449 574 85 6 1564 2129 659569381 659569952 5.380000e-145 525.0
23 TraesCS1B01G225000 chr4B 83.275 574 86 6 1564 2129 656821698 656822269 2.500000e-143 520.0
24 TraesCS1B01G225000 chr4B 79.342 760 140 15 4268 5020 659582652 659583401 9.010000e-143 518.0
25 TraesCS1B01G225000 chr4B 78.975 761 141 17 4268 5020 656827447 656828196 9.070000e-138 501.0
26 TraesCS1B01G225000 chr4B 84.545 220 34 0 1251 1470 659569143 659569362 1.020000e-52 219.0
27 TraesCS1B01G225000 chr4B 87.368 95 9 3 454 546 603161332 603161239 8.310000e-19 106.0
28 TraesCS1B01G225000 chr4D 79.396 762 142 13 4268 5023 508265359 508264607 1.940000e-144 523.0
29 TraesCS1B01G225000 chr4D 84.211 228 35 1 1251 1478 508271746 508271520 2.840000e-53 220.0
30 TraesCS1B01G225000 chr4D 86.747 83 9 2 452 533 80153142 80153223 2.330000e-14 91.6
31 TraesCS1B01G225000 chr5A 83.130 575 85 8 1564 2129 693641971 693641400 1.170000e-141 514.0
32 TraesCS1B01G225000 chr5A 78.637 763 146 15 4268 5023 693633708 693632956 1.960000e-134 490.0
33 TraesCS1B01G225000 chr5A 89.177 231 24 1 3440 3670 44120583 44120354 2.760000e-73 287.0
34 TraesCS1B01G225000 chr5A 89.286 224 23 1 3447 3670 696919662 696919884 4.630000e-71 279.0
35 TraesCS1B01G225000 chr5A 84.211 228 35 1 1251 1478 693642209 693641983 2.840000e-53 220.0
36 TraesCS1B01G225000 chr5A 85.714 84 10 2 451 533 277325298 277325380 3.010000e-13 87.9
37 TraesCS1B01G225000 chr7A 76.224 715 127 28 4250 4935 420838388 420837688 7.530000e-89 339.0
38 TraesCS1B01G225000 chr7A 84.404 218 34 0 1254 1471 420843242 420843025 1.320000e-51 215.0
39 TraesCS1B01G225000 chr7D 76.141 679 128 21 4280 4935 374566008 374565341 5.860000e-85 326.0
40 TraesCS1B01G225000 chr7D 85.882 85 11 1 450 533 459743036 459743120 8.370000e-14 89.8
41 TraesCS1B01G225000 chr3B 90.086 232 23 0 3442 3673 154763315 154763546 9.870000e-78 302.0
42 TraesCS1B01G225000 chr3B 88.115 244 28 1 3438 3681 157926710 157926468 7.690000e-74 289.0
43 TraesCS1B01G225000 chr3B 89.083 229 24 1 3442 3670 767667189 767666962 3.580000e-72 283.0
44 TraesCS1B01G225000 chr7B 89.778 225 20 3 3447 3670 667750329 667750107 9.940000e-73 285.0
45 TraesCS1B01G225000 chr6B 84.752 282 41 2 3440 3721 687018193 687018472 1.290000e-71 281.0
46 TraesCS1B01G225000 chr2A 88.362 232 25 2 3440 3670 652999506 652999276 1.660000e-70 278.0
47 TraesCS1B01G225000 chr2A 88.889 45 5 0 3091 3135 15030508 15030464 8.490000e-04 56.5
48 TraesCS1B01G225000 chr2A 76.364 110 20 3 344 453 139939926 139940029 3.000000e-03 54.7
49 TraesCS1B01G225000 chr5D 72.741 642 137 31 1284 1900 480465625 480464997 1.340000e-41 182.0
50 TraesCS1B01G225000 chr5D 100.000 28 0 0 2610 2637 281850529 281850556 1.100000e-02 52.8
51 TraesCS1B01G225000 chr2B 85.870 92 10 3 454 543 573590824 573590914 1.800000e-15 95.3
52 TraesCS1B01G225000 chr4A 84.158 101 11 4 451 549 627366292 627366389 6.470000e-15 93.5
53 TraesCS1B01G225000 chr5B 85.714 84 10 2 451 533 55500298 55500216 3.010000e-13 87.9
54 TraesCS1B01G225000 chr2D 97.222 36 1 0 3168 3203 436001959 436001994 1.820000e-05 62.1
55 TraesCS1B01G225000 chr3A 100.000 28 0 0 3174 3201 438605954 438605927 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G225000 chr1B 403577148 403583209 6061 True 11195.000000 11195 100.000000 1 6062 1 chr1B.!!$R2 6061
1 TraesCS1B01G225000 chr1B 403541306 403543754 2448 False 782.333333 1134 90.096333 1062 5062 3 chr1B.!!$F1 4000
2 TraesCS1B01G225000 chr1A 373769818 373775122 5304 True 2199.666667 3674 87.854667 643 6059 3 chr1A.!!$R2 5416
3 TraesCS1B01G225000 chr1A 373766490 373768534 2044 False 783.000000 1098 93.265667 1250 5062 3 chr1A.!!$F1 3812
4 TraesCS1B01G225000 chr1D 299576214 299578360 2146 False 1131.000000 1153 89.786000 1250 5062 2 chr1D.!!$F1 3812
5 TraesCS1B01G225000 chr1D 299579705 299586550 6845 True 866.275000 3040 90.236750 4 5963 8 chr1D.!!$R1 5959
6 TraesCS1B01G225000 chr4B 656821698 656822269 571 False 520.000000 520 83.275000 1564 2129 1 chr4B.!!$F1 565
7 TraesCS1B01G225000 chr4B 659582652 659583401 749 False 518.000000 518 79.342000 4268 5020 1 chr4B.!!$F3 752
8 TraesCS1B01G225000 chr4B 656827447 656828196 749 False 501.000000 501 78.975000 4268 5020 1 chr4B.!!$F2 752
9 TraesCS1B01G225000 chr4B 659569143 659569952 809 False 372.000000 525 83.997000 1251 2129 2 chr4B.!!$F4 878
10 TraesCS1B01G225000 chr4D 508264607 508265359 752 True 523.000000 523 79.396000 4268 5023 1 chr4D.!!$R1 755
11 TraesCS1B01G225000 chr5A 693632956 693633708 752 True 490.000000 490 78.637000 4268 5023 1 chr5A.!!$R2 755
12 TraesCS1B01G225000 chr5A 693641400 693642209 809 True 367.000000 514 83.670500 1251 2129 2 chr5A.!!$R3 878
13 TraesCS1B01G225000 chr7A 420837688 420838388 700 True 339.000000 339 76.224000 4250 4935 1 chr7A.!!$R1 685
14 TraesCS1B01G225000 chr7D 374565341 374566008 667 True 326.000000 326 76.141000 4280 4935 1 chr7D.!!$R1 655

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 1349 1.065273 CGTCACCGCGCTACCTATT 59.935 57.895 5.56 0.0 0.00 1.73 F
1227 1646 0.179134 GGTGTCGGACGAATGGAGAG 60.179 60.000 3.34 0.0 0.00 3.20 F
2136 2652 0.739813 GAGTGCCGGTAAGCATTCGT 60.740 55.000 1.90 0.0 46.24 3.85 F
3312 4125 0.754217 CAGCCATAGCCAACAGCCAT 60.754 55.000 0.00 0.0 45.47 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2749 3325 1.084666 CAACTCAATCGATCGCGCG 60.085 57.895 26.76 26.76 37.46 6.86 R
3155 3968 0.693622 TGAACCGGGGTGAGCATAAA 59.306 50.000 6.32 0.00 0.00 1.40 R
3600 4413 0.034186 TCATGCAGGTGATGGAACCC 60.034 55.000 0.00 0.00 41.54 4.11 R
5306 6275 0.166814 CAAGCGCAACAGTAGCCTTC 59.833 55.000 11.47 0.00 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.962481 CGAGCTACAAAAATATTGCGAGC 59.038 43.478 0.00 7.30 34.04 5.03
103 105 9.584008 AGTAGTAAGTGCCAATAGCTAACTATA 57.416 33.333 0.00 0.00 44.23 1.31
149 151 1.551883 ACTACCGGATAAAGTTGGCGT 59.448 47.619 9.46 0.00 0.00 5.68
291 293 7.759465 TCGAAGAAAATACTATATAGAGCCCG 58.241 38.462 16.79 7.03 0.00 6.13
315 317 5.634020 GCGGTTAGCTCTACTATTAACCATG 59.366 44.000 10.53 0.00 43.24 3.66
317 319 6.516860 CGGTTAGCTCTACTATTAACCATGCT 60.517 42.308 10.53 0.00 43.24 3.79
335 337 5.394553 CCATGCTTTTGGAAAATACTCCCTC 60.395 44.000 0.00 0.00 39.25 4.30
389 391 9.930693 AAACAACACAATCTTTAACCAGTTTTA 57.069 25.926 0.00 0.00 0.00 1.52
539 541 8.514136 TTATATGCAAACGAAAAAGAAACAGG 57.486 30.769 0.00 0.00 0.00 4.00
549 551 7.823665 ACGAAAAAGAAACAGGGGATTAATAC 58.176 34.615 0.00 0.00 0.00 1.89
550 552 7.668469 ACGAAAAAGAAACAGGGGATTAATACT 59.332 33.333 0.00 0.00 0.00 2.12
573 575 1.549170 GTGTCATCTCAACCCGGTAGT 59.451 52.381 0.00 0.00 0.00 2.73
580 582 2.100989 CTCAACCCGGTAGTCTAGCTT 58.899 52.381 0.00 0.00 0.00 3.74
606 608 1.718757 CGCCTGCTCAACCAATAGCC 61.719 60.000 0.00 0.00 37.97 3.93
608 610 1.957113 GCCTGCTCAACCAATAGCCTT 60.957 52.381 0.00 0.00 37.97 4.35
661 1069 4.067896 GCTAGCTAGCCAATAATTGAGCA 58.932 43.478 31.67 0.00 43.39 4.26
696 1104 1.821136 GCCAGAGTCATGGGAAAAAGG 59.179 52.381 9.72 0.00 40.97 3.11
698 1106 3.350833 CCAGAGTCATGGGAAAAAGGAG 58.649 50.000 0.00 0.00 36.64 3.69
707 1115 1.683441 GAAAAAGGAGCCCGGGAGA 59.317 57.895 29.31 0.00 0.00 3.71
720 1128 2.060050 CGGGAGACAGGAGATACAGT 57.940 55.000 0.00 0.00 0.00 3.55
721 1129 1.678627 CGGGAGACAGGAGATACAGTG 59.321 57.143 0.00 0.00 0.00 3.66
722 1130 2.684038 CGGGAGACAGGAGATACAGTGA 60.684 54.545 0.00 0.00 0.00 3.41
723 1131 2.691011 GGGAGACAGGAGATACAGTGAC 59.309 54.545 0.00 0.00 0.00 3.67
725 1133 4.385421 GGGAGACAGGAGATACAGTGACTA 60.385 50.000 0.00 0.00 0.00 2.59
730 1138 8.140112 AGACAGGAGATACAGTGACTATTTTT 57.860 34.615 0.00 0.00 0.00 1.94
823 1231 3.470888 CAGCCCGAATCCCGAGGT 61.471 66.667 0.00 0.00 41.76 3.85
928 1340 4.421479 AGCTTCCTCGTCACCGCG 62.421 66.667 0.00 0.00 0.00 6.46
931 1343 3.047718 CTTCCTCGTCACCGCGCTA 62.048 63.158 5.56 0.00 0.00 4.26
935 1347 2.436469 TCGTCACCGCGCTACCTA 60.436 61.111 5.56 0.00 0.00 3.08
937 1349 1.065273 CGTCACCGCGCTACCTATT 59.935 57.895 5.56 0.00 0.00 1.73
993 1406 2.300152 ACGTGAGAGGCTTGATCTTGAA 59.700 45.455 0.00 0.00 0.00 2.69
1196 1609 1.421485 GTCGCTTCGTGGAATGCTG 59.579 57.895 0.00 0.00 0.00 4.41
1213 1632 1.560923 CTGGTTCGATCGATGGTGTC 58.439 55.000 20.18 5.87 0.00 3.67
1227 1646 0.179134 GGTGTCGGACGAATGGAGAG 60.179 60.000 3.34 0.00 0.00 3.20
1239 1658 3.067883 CGAATGGAGAGCTGAGATCTTGA 59.932 47.826 0.20 0.00 0.00 3.02
1444 1863 2.786495 CCGCTACCTCACCATCGCT 61.786 63.158 0.00 0.00 0.00 4.93
1473 1975 2.340809 CGTCCAAGCCACCGTACA 59.659 61.111 0.00 0.00 0.00 2.90
1482 1984 1.644786 GCCACCGTACATGACTTGCC 61.645 60.000 0.00 0.00 0.00 4.52
1513 2019 2.669133 TTGCACGCCTAGCATCCCT 61.669 57.895 0.00 0.00 42.33 4.20
1530 2040 3.441101 TCCCTGTACTGACTTGCATAGT 58.559 45.455 0.60 0.00 40.71 2.12
1532 2042 4.286032 TCCCTGTACTGACTTGCATAGTTT 59.714 41.667 0.60 0.00 37.17 2.66
1726 2242 3.986006 TCGAGCGTGTCCGGCTTT 61.986 61.111 0.00 0.00 41.72 3.51
2136 2652 0.739813 GAGTGCCGGTAAGCATTCGT 60.740 55.000 1.90 0.00 46.24 3.85
2192 2708 6.426937 CCTAGTCTGCTGCTTTAACAACTAAA 59.573 38.462 0.00 0.00 0.00 1.85
2194 2710 6.672147 AGTCTGCTGCTTTAACAACTAAATG 58.328 36.000 0.00 0.00 0.00 2.32
2195 2711 6.263168 AGTCTGCTGCTTTAACAACTAAATGT 59.737 34.615 0.00 0.00 34.24 2.71
2196 2712 7.444183 AGTCTGCTGCTTTAACAACTAAATGTA 59.556 33.333 0.00 0.00 32.02 2.29
2197 2713 7.746475 GTCTGCTGCTTTAACAACTAAATGTAG 59.254 37.037 0.00 0.00 32.02 2.74
2198 2714 7.444183 TCTGCTGCTTTAACAACTAAATGTAGT 59.556 33.333 0.00 0.00 42.66 2.73
2200 2716 9.058174 TGCTGCTTTAACAACTAAATGTAGTAA 57.942 29.630 0.00 0.00 39.79 2.24
2218 2740 5.259832 AGTAATTAACCTGGTAGACGAGC 57.740 43.478 0.00 0.00 0.00 5.03
2228 2750 2.504585 TGGTAGACGAGCTCTAGGAGAA 59.495 50.000 12.85 0.00 31.64 2.87
2271 2793 1.278985 CAGGCCAGGTTGTCTGATACA 59.721 52.381 5.01 0.00 46.18 2.29
2273 2795 1.279271 GGCCAGGTTGTCTGATACACT 59.721 52.381 0.00 0.00 46.18 3.55
2308 2831 7.636150 ATGGGATTAAACTGAGATTTGAGTG 57.364 36.000 0.00 0.00 0.00 3.51
2427 2964 2.915137 GCCTCCCTCTCTAGCCGG 60.915 72.222 0.00 0.00 0.00 6.13
2532 3070 5.138276 AGTCAGAACAGTACAGTACTTCCA 58.862 41.667 10.80 0.00 36.76 3.53
2533 3071 5.775701 AGTCAGAACAGTACAGTACTTCCAT 59.224 40.000 10.80 0.00 36.76 3.41
2575 3113 6.007703 AGCTAAGCTAGAATAGACACTAGGG 58.992 44.000 0.00 0.00 42.77 3.53
2576 3114 5.184287 GCTAAGCTAGAATAGACACTAGGGG 59.816 48.000 0.00 0.00 42.77 4.79
2588 3126 2.040178 CACTAGGGGATGGTCCAGTAC 58.960 57.143 0.00 0.00 38.64 2.73
2602 3140 4.080526 GGTCCAGTACCCAGTGATTGTAAT 60.081 45.833 0.00 0.00 43.16 1.89
2604 3142 6.183361 GGTCCAGTACCCAGTGATTGTAATAT 60.183 42.308 0.00 0.00 43.16 1.28
2605 3143 6.929606 GTCCAGTACCCAGTGATTGTAATATC 59.070 42.308 0.00 0.00 0.00 1.63
2606 3144 6.613679 TCCAGTACCCAGTGATTGTAATATCA 59.386 38.462 0.00 0.00 32.29 2.15
2607 3145 7.126573 TCCAGTACCCAGTGATTGTAATATCAA 59.873 37.037 0.00 0.00 36.37 2.57
2608 3146 7.442364 CCAGTACCCAGTGATTGTAATATCAAG 59.558 40.741 0.00 0.00 36.37 3.02
2609 3147 7.987458 CAGTACCCAGTGATTGTAATATCAAGT 59.013 37.037 0.00 0.00 36.37 3.16
2610 3148 8.548877 AGTACCCAGTGATTGTAATATCAAGTT 58.451 33.333 0.00 0.00 36.37 2.66
2611 3149 9.174166 GTACCCAGTGATTGTAATATCAAGTTT 57.826 33.333 0.00 0.00 36.37 2.66
2612 3150 8.650143 ACCCAGTGATTGTAATATCAAGTTTT 57.350 30.769 0.00 0.00 36.37 2.43
2613 3151 9.088987 ACCCAGTGATTGTAATATCAAGTTTTT 57.911 29.630 0.00 0.00 36.37 1.94
2630 3168 2.859165 TTTTGAGGAATCTCGCCACT 57.141 45.000 0.00 0.00 42.79 4.00
2631 3169 2.859165 TTTGAGGAATCTCGCCACTT 57.141 45.000 0.00 0.00 42.79 3.16
2632 3170 2.859165 TTGAGGAATCTCGCCACTTT 57.141 45.000 0.00 0.00 42.79 2.66
2633 3171 3.973206 TTGAGGAATCTCGCCACTTTA 57.027 42.857 0.00 0.00 42.79 1.85
2634 3172 4.487714 TTGAGGAATCTCGCCACTTTAT 57.512 40.909 0.00 0.00 42.79 1.40
2635 3173 4.487714 TGAGGAATCTCGCCACTTTATT 57.512 40.909 0.00 0.00 42.79 1.40
2636 3174 5.607939 TGAGGAATCTCGCCACTTTATTA 57.392 39.130 0.00 0.00 42.79 0.98
2637 3175 6.174720 TGAGGAATCTCGCCACTTTATTAT 57.825 37.500 0.00 0.00 42.79 1.28
2638 3176 5.991606 TGAGGAATCTCGCCACTTTATTATG 59.008 40.000 0.00 0.00 42.79 1.90
2639 3177 4.757149 AGGAATCTCGCCACTTTATTATGC 59.243 41.667 0.00 0.00 0.00 3.14
2640 3178 4.515191 GGAATCTCGCCACTTTATTATGCA 59.485 41.667 0.00 0.00 0.00 3.96
2641 3179 5.008613 GGAATCTCGCCACTTTATTATGCAA 59.991 40.000 0.00 0.00 0.00 4.08
2642 3180 6.294176 GGAATCTCGCCACTTTATTATGCAAT 60.294 38.462 0.00 0.00 0.00 3.56
2643 3181 7.094805 GGAATCTCGCCACTTTATTATGCAATA 60.095 37.037 0.00 0.00 0.00 1.90
2644 3182 6.785488 TCTCGCCACTTTATTATGCAATAG 57.215 37.500 0.00 0.00 0.00 1.73
2645 3183 6.521162 TCTCGCCACTTTATTATGCAATAGA 58.479 36.000 0.00 0.00 0.00 1.98
2646 3184 6.989759 TCTCGCCACTTTATTATGCAATAGAA 59.010 34.615 0.00 0.00 0.00 2.10
2647 3185 7.171508 TCTCGCCACTTTATTATGCAATAGAAG 59.828 37.037 0.00 0.00 0.00 2.85
2648 3186 6.989759 TCGCCACTTTATTATGCAATAGAAGA 59.010 34.615 0.00 0.00 0.00 2.87
2649 3187 7.661437 TCGCCACTTTATTATGCAATAGAAGAT 59.339 33.333 0.00 0.00 0.00 2.40
2650 3188 8.292448 CGCCACTTTATTATGCAATAGAAGATT 58.708 33.333 0.00 0.00 0.00 2.40
2651 3189 9.403110 GCCACTTTATTATGCAATAGAAGATTG 57.597 33.333 0.00 0.00 0.00 2.67
2697 3235 1.202651 GCGTTGGGCCATCTACTGTAT 60.203 52.381 7.26 0.00 34.80 2.29
2704 3242 6.299805 TGGGCCATCTACTGTATATTCATC 57.700 41.667 0.00 0.00 0.00 2.92
2898 3474 4.538746 AATCTAGCTAGCCGGGATTAAC 57.461 45.455 16.35 0.00 0.00 2.01
3018 3830 1.542915 ACGAACCGCTAACAAGCTAGA 59.457 47.619 0.00 0.00 0.00 2.43
3051 3863 4.202535 ACCACCCGGAAAAGAAATTACTCT 60.203 41.667 0.73 0.00 35.59 3.24
3054 3866 5.705905 CACCCGGAAAAGAAATTACTCTCTT 59.294 40.000 0.73 0.00 33.25 2.85
3055 3867 5.705905 ACCCGGAAAAGAAATTACTCTCTTG 59.294 40.000 0.73 0.00 32.23 3.02
3056 3868 5.123979 CCCGGAAAAGAAATTACTCTCTTGG 59.876 44.000 0.73 0.00 32.23 3.61
3059 3871 7.121315 CCGGAAAAGAAATTACTCTCTTGGATT 59.879 37.037 0.00 0.00 32.23 3.01
3071 3883 9.793259 TTACTCTCTTGGATTCAAAATAAGTGT 57.207 29.630 0.00 0.00 31.77 3.55
3072 3884 8.329203 ACTCTCTTGGATTCAAAATAAGTGTC 57.671 34.615 0.00 0.00 31.77 3.67
3074 3886 6.934645 TCTCTTGGATTCAAAATAAGTGTCGT 59.065 34.615 0.00 0.00 31.77 4.34
3075 3887 6.898041 TCTTGGATTCAAAATAAGTGTCGTG 58.102 36.000 0.00 0.00 31.77 4.35
3123 3936 2.993220 CACGACACTCATTTTGGATCGA 59.007 45.455 0.00 0.00 32.63 3.59
3128 3941 3.753272 ACACTCATTTTGGATCGAAGTGG 59.247 43.478 11.54 3.31 0.00 4.00
3166 3979 4.870363 TCAGCAAAAAGTTTATGCTCACC 58.130 39.130 9.19 0.00 46.98 4.02
3170 3983 1.834188 AAAGTTTATGCTCACCCCGG 58.166 50.000 0.00 0.00 0.00 5.73
3176 3989 1.796017 TATGCTCACCCCGGTTCATA 58.204 50.000 0.00 0.00 0.00 2.15
3186 3999 4.024387 CACCCCGGTTCATATTAATTGTCG 60.024 45.833 0.00 0.37 0.00 4.35
3187 4000 3.058501 CCCCGGTTCATATTAATTGTCGC 60.059 47.826 0.00 0.00 0.00 5.19
3217 4030 7.921786 TGGTACAATTCTAACCATGAAAGAG 57.078 36.000 0.00 0.00 38.36 2.85
3218 4031 7.685481 TGGTACAATTCTAACCATGAAAGAGA 58.315 34.615 0.00 0.00 38.36 3.10
3219 4032 8.160765 TGGTACAATTCTAACCATGAAAGAGAA 58.839 33.333 0.00 0.00 38.36 2.87
3220 4033 9.010029 GGTACAATTCTAACCATGAAAGAGAAA 57.990 33.333 0.00 0.00 33.28 2.52
3221 4034 9.827411 GTACAATTCTAACCATGAAAGAGAAAC 57.173 33.333 0.00 0.00 30.41 2.78
3222 4035 8.697507 ACAATTCTAACCATGAAAGAGAAACT 57.302 30.769 0.00 0.00 30.41 2.66
3223 4036 9.136323 ACAATTCTAACCATGAAAGAGAAACTT 57.864 29.630 0.00 0.00 40.98 2.66
3283 4096 4.763279 GGGTCAATTTAGGGAAAGTTTCGA 59.237 41.667 9.46 0.00 0.00 3.71
3299 4112 2.393768 CGACGCAAGAAGCAGCCAT 61.394 57.895 0.00 0.00 46.13 4.40
3304 4117 1.033746 GCAAGAAGCAGCCATAGCCA 61.034 55.000 0.00 0.00 44.79 4.75
3312 4125 0.754217 CAGCCATAGCCAACAGCCAT 60.754 55.000 0.00 0.00 45.47 4.40
3345 4158 2.188994 GGCATCTCGCAGCTTCCT 59.811 61.111 0.00 0.00 45.17 3.36
3346 4159 2.178890 GGCATCTCGCAGCTTCCTG 61.179 63.158 0.00 0.00 45.17 3.86
3376 4189 1.723115 CGTGCAATGCATCGCGTTTC 61.723 55.000 12.38 0.00 41.91 2.78
3444 4257 2.738964 GCGAGCTAGTTCCTTGTAAGGG 60.739 54.545 10.59 0.00 46.47 3.95
3445 4258 2.496470 CGAGCTAGTTCCTTGTAAGGGT 59.504 50.000 10.59 0.00 46.47 4.34
3446 4259 3.429135 CGAGCTAGTTCCTTGTAAGGGTC 60.429 52.174 10.59 4.76 46.47 4.46
3447 4260 3.770388 GAGCTAGTTCCTTGTAAGGGTCT 59.230 47.826 10.59 10.91 46.47 3.85
3448 4261 3.515901 AGCTAGTTCCTTGTAAGGGTCTG 59.484 47.826 10.59 6.17 46.47 3.51
3449 4262 3.261137 GCTAGTTCCTTGTAAGGGTCTGT 59.739 47.826 10.59 0.00 46.47 3.41
3450 4263 4.262938 GCTAGTTCCTTGTAAGGGTCTGTT 60.263 45.833 10.59 0.00 46.47 3.16
3451 4264 4.790718 AGTTCCTTGTAAGGGTCTGTTT 57.209 40.909 10.59 0.00 46.47 2.83
3452 4265 4.461198 AGTTCCTTGTAAGGGTCTGTTTG 58.539 43.478 10.59 0.00 46.47 2.93
3453 4266 3.502123 TCCTTGTAAGGGTCTGTTTGG 57.498 47.619 10.59 0.00 46.47 3.28
3454 4267 2.781174 TCCTTGTAAGGGTCTGTTTGGT 59.219 45.455 10.59 0.00 46.47 3.67
3455 4268 3.203487 TCCTTGTAAGGGTCTGTTTGGTT 59.797 43.478 10.59 0.00 46.47 3.67
3456 4269 3.958147 CCTTGTAAGGGTCTGTTTGGTTT 59.042 43.478 2.63 0.00 42.66 3.27
3457 4270 4.037565 CCTTGTAAGGGTCTGTTTGGTTTC 59.962 45.833 2.63 0.00 42.66 2.78
3458 4271 4.237976 TGTAAGGGTCTGTTTGGTTTCA 57.762 40.909 0.00 0.00 0.00 2.69
3459 4272 4.601084 TGTAAGGGTCTGTTTGGTTTCAA 58.399 39.130 0.00 0.00 0.00 2.69
3460 4273 5.205056 TGTAAGGGTCTGTTTGGTTTCAAT 58.795 37.500 0.00 0.00 32.28 2.57
3461 4274 5.659079 TGTAAGGGTCTGTTTGGTTTCAATT 59.341 36.000 0.00 0.00 32.28 2.32
3462 4275 6.834451 TGTAAGGGTCTGTTTGGTTTCAATTA 59.166 34.615 0.00 0.00 32.28 1.40
3463 4276 6.800072 AAGGGTCTGTTTGGTTTCAATTAA 57.200 33.333 0.00 0.00 32.28 1.40
3464 4277 6.405278 AGGGTCTGTTTGGTTTCAATTAAG 57.595 37.500 0.00 0.00 32.28 1.85
3465 4278 5.897250 AGGGTCTGTTTGGTTTCAATTAAGT 59.103 36.000 0.00 0.00 32.28 2.24
3466 4279 6.040504 AGGGTCTGTTTGGTTTCAATTAAGTC 59.959 38.462 0.00 0.00 32.28 3.01
3467 4280 6.183360 GGGTCTGTTTGGTTTCAATTAAGTCA 60.183 38.462 0.00 0.00 32.28 3.41
3468 4281 6.695713 GGTCTGTTTGGTTTCAATTAAGTCAC 59.304 38.462 0.00 0.00 32.28 3.67
3469 4282 7.416326 GGTCTGTTTGGTTTCAATTAAGTCACT 60.416 37.037 0.00 0.00 32.28 3.41
3470 4283 8.617809 GTCTGTTTGGTTTCAATTAAGTCACTA 58.382 33.333 0.00 0.00 32.28 2.74
3471 4284 9.179909 TCTGTTTGGTTTCAATTAAGTCACTAA 57.820 29.630 0.00 0.00 32.28 2.24
3472 4285 9.233232 CTGTTTGGTTTCAATTAAGTCACTAAC 57.767 33.333 0.00 0.00 32.28 2.34
3473 4286 8.962679 TGTTTGGTTTCAATTAAGTCACTAACT 58.037 29.630 0.00 0.00 34.34 2.24
3474 4287 9.797556 GTTTGGTTTCAATTAAGTCACTAACTT 57.202 29.630 0.00 0.00 40.83 2.66
3511 4324 9.646427 AAGTGCAAAAAGTAACTTATTTTGTCA 57.354 25.926 10.70 7.33 42.89 3.58
3512 4325 9.646427 AGTGCAAAAAGTAACTTATTTTGTCAA 57.354 25.926 10.70 0.00 42.89 3.18
3532 4345 7.130303 GTCAAACAGACCCAACTTATAAGTC 57.870 40.000 18.28 6.18 41.56 3.01
3533 4346 6.708949 GTCAAACAGACCCAACTTATAAGTCA 59.291 38.462 18.28 0.00 41.56 3.41
3534 4347 6.708949 TCAAACAGACCCAACTTATAAGTCAC 59.291 38.462 18.28 8.47 38.57 3.67
3535 4348 6.435292 AACAGACCCAACTTATAAGTCACT 57.565 37.500 18.28 10.30 38.57 3.41
3536 4349 6.038997 ACAGACCCAACTTATAAGTCACTC 57.961 41.667 18.28 10.48 38.57 3.51
3537 4350 5.046520 ACAGACCCAACTTATAAGTCACTCC 60.047 44.000 18.28 8.46 38.57 3.85
3538 4351 5.046591 CAGACCCAACTTATAAGTCACTCCA 60.047 44.000 18.28 0.00 38.57 3.86
3539 4352 5.546499 AGACCCAACTTATAAGTCACTCCAA 59.454 40.000 18.28 0.00 38.57 3.53
3540 4353 5.557866 ACCCAACTTATAAGTCACTCCAAC 58.442 41.667 18.28 0.00 38.57 3.77
3541 4354 5.309806 ACCCAACTTATAAGTCACTCCAACT 59.690 40.000 18.28 0.00 38.57 3.16
3542 4355 6.183361 ACCCAACTTATAAGTCACTCCAACTT 60.183 38.462 18.28 0.00 38.57 2.66
3543 4356 7.016858 ACCCAACTTATAAGTCACTCCAACTTA 59.983 37.037 18.28 0.00 41.91 2.24
3544 4357 8.047310 CCCAACTTATAAGTCACTCCAACTTAT 58.953 37.037 18.28 11.86 46.48 1.73
3565 4378 8.316640 CTTATAAGTCATAAGTTGCTCCATCC 57.683 38.462 4.18 0.00 40.84 3.51
3566 4379 3.567478 AGTCATAAGTTGCTCCATCCC 57.433 47.619 0.00 0.00 0.00 3.85
3567 4380 2.846206 AGTCATAAGTTGCTCCATCCCA 59.154 45.455 0.00 0.00 0.00 4.37
3568 4381 3.266772 AGTCATAAGTTGCTCCATCCCAA 59.733 43.478 0.00 0.00 0.00 4.12
3569 4382 3.378427 GTCATAAGTTGCTCCATCCCAAC 59.622 47.826 0.00 0.00 41.13 3.77
3571 4384 3.965888 AGTTGCTCCATCCCAACTC 57.034 52.632 0.56 0.00 46.22 3.01
3572 4385 1.067295 AGTTGCTCCATCCCAACTCA 58.933 50.000 0.56 0.00 46.22 3.41
3573 4386 1.425066 AGTTGCTCCATCCCAACTCAA 59.575 47.619 0.56 0.00 46.22 3.02
3574 4387 2.158475 AGTTGCTCCATCCCAACTCAAA 60.158 45.455 0.56 0.00 46.22 2.69
3575 4388 2.627699 GTTGCTCCATCCCAACTCAAAA 59.372 45.455 0.00 0.00 38.55 2.44
3576 4389 2.238521 TGCTCCATCCCAACTCAAAAC 58.761 47.619 0.00 0.00 0.00 2.43
3577 4390 2.158475 TGCTCCATCCCAACTCAAAACT 60.158 45.455 0.00 0.00 0.00 2.66
3578 4391 2.893489 GCTCCATCCCAACTCAAAACTT 59.107 45.455 0.00 0.00 0.00 2.66
3579 4392 4.079253 GCTCCATCCCAACTCAAAACTTA 58.921 43.478 0.00 0.00 0.00 2.24
3580 4393 4.706962 GCTCCATCCCAACTCAAAACTTAT 59.293 41.667 0.00 0.00 0.00 1.73
3581 4394 5.885912 GCTCCATCCCAACTCAAAACTTATA 59.114 40.000 0.00 0.00 0.00 0.98
3582 4395 6.377146 GCTCCATCCCAACTCAAAACTTATAA 59.623 38.462 0.00 0.00 0.00 0.98
3583 4396 7.415653 GCTCCATCCCAACTCAAAACTTATAAG 60.416 40.741 11.05 11.05 0.00 1.73
3584 4397 7.466804 TCCATCCCAACTCAAAACTTATAAGT 58.533 34.615 12.50 12.50 42.04 2.24
3585 4398 7.610305 TCCATCCCAACTCAAAACTTATAAGTC 59.390 37.037 18.28 0.00 38.57 3.01
3586 4399 7.393234 CCATCCCAACTCAAAACTTATAAGTCA 59.607 37.037 18.28 3.03 38.57 3.41
3587 4400 7.739498 TCCCAACTCAAAACTTATAAGTCAC 57.261 36.000 18.28 0.00 38.57 3.67
3588 4401 6.713450 TCCCAACTCAAAACTTATAAGTCACC 59.287 38.462 18.28 0.00 38.57 4.02
3589 4402 6.715264 CCCAACTCAAAACTTATAAGTCACCT 59.285 38.462 18.28 0.05 38.57 4.00
3590 4403 7.094762 CCCAACTCAAAACTTATAAGTCACCTC 60.095 40.741 18.28 0.00 38.57 3.85
3591 4404 7.094762 CCAACTCAAAACTTATAAGTCACCTCC 60.095 40.741 18.28 0.00 38.57 4.30
3592 4405 7.317722 ACTCAAAACTTATAAGTCACCTCCT 57.682 36.000 18.28 0.00 38.57 3.69
3593 4406 7.746703 ACTCAAAACTTATAAGTCACCTCCTT 58.253 34.615 18.28 4.77 38.57 3.36
3594 4407 8.218488 ACTCAAAACTTATAAGTCACCTCCTTT 58.782 33.333 18.28 10.30 38.57 3.11
3595 4408 8.990163 TCAAAACTTATAAGTCACCTCCTTTT 57.010 30.769 18.28 9.64 38.57 2.27
3598 4411 8.543862 AAACTTATAAGTCACCTCCTTTTACG 57.456 34.615 18.28 0.00 38.57 3.18
3599 4412 7.237209 ACTTATAAGTCACCTCCTTTTACGT 57.763 36.000 12.50 0.00 32.86 3.57
3600 4413 7.095270 ACTTATAAGTCACCTCCTTTTACGTG 58.905 38.462 12.50 0.00 32.86 4.49
3601 4414 2.833631 AGTCACCTCCTTTTACGTGG 57.166 50.000 0.00 0.00 0.00 4.94
3602 4415 1.346722 AGTCACCTCCTTTTACGTGGG 59.653 52.381 0.00 0.00 0.00 4.61
3603 4416 1.071228 GTCACCTCCTTTTACGTGGGT 59.929 52.381 0.00 0.00 0.00 4.51
3604 4417 1.770061 TCACCTCCTTTTACGTGGGTT 59.230 47.619 0.00 0.00 0.00 4.11
3605 4418 2.148768 CACCTCCTTTTACGTGGGTTC 58.851 52.381 0.00 0.00 0.00 3.62
3606 4419 1.072806 ACCTCCTTTTACGTGGGTTCC 59.927 52.381 0.00 0.00 0.00 3.62
3607 4420 1.072648 CCTCCTTTTACGTGGGTTCCA 59.927 52.381 0.00 0.00 0.00 3.53
3608 4421 2.290705 CCTCCTTTTACGTGGGTTCCAT 60.291 50.000 0.00 0.00 35.28 3.41
3609 4422 3.007635 CTCCTTTTACGTGGGTTCCATC 58.992 50.000 0.00 0.00 35.28 3.51
3610 4423 2.372504 TCCTTTTACGTGGGTTCCATCA 59.627 45.455 0.00 0.00 35.28 3.07
3611 4424 2.486592 CCTTTTACGTGGGTTCCATCAC 59.513 50.000 0.00 0.00 35.28 3.06
3612 4425 2.188062 TTTACGTGGGTTCCATCACC 57.812 50.000 0.00 0.00 35.28 4.02
3613 4426 1.354101 TTACGTGGGTTCCATCACCT 58.646 50.000 0.00 0.00 35.28 4.00
3614 4427 0.611200 TACGTGGGTTCCATCACCTG 59.389 55.000 0.00 0.00 35.28 4.00
3615 4428 2.040544 CGTGGGTTCCATCACCTGC 61.041 63.158 0.00 0.00 35.28 4.85
3616 4429 1.074775 GTGGGTTCCATCACCTGCA 59.925 57.895 0.00 0.00 35.28 4.41
3617 4430 0.323725 GTGGGTTCCATCACCTGCAT 60.324 55.000 0.00 0.00 35.28 3.96
3618 4431 0.323633 TGGGTTCCATCACCTGCATG 60.324 55.000 0.00 0.00 36.97 4.06
3619 4432 0.034186 GGGTTCCATCACCTGCATGA 60.034 55.000 0.00 0.00 36.97 3.07
3620 4433 1.410648 GGGTTCCATCACCTGCATGAT 60.411 52.381 0.00 0.00 40.03 2.45
3628 4441 4.649088 ATCACCTGCATGATGTTGATTG 57.351 40.909 1.96 0.00 37.93 2.67
3629 4442 2.756207 TCACCTGCATGATGTTGATTGG 59.244 45.455 0.00 0.00 0.00 3.16
3630 4443 2.494471 CACCTGCATGATGTTGATTGGT 59.506 45.455 0.00 0.00 0.00 3.67
3631 4444 3.695556 CACCTGCATGATGTTGATTGGTA 59.304 43.478 0.00 0.00 0.00 3.25
3632 4445 4.340097 CACCTGCATGATGTTGATTGGTAT 59.660 41.667 0.00 0.00 0.00 2.73
3633 4446 4.340097 ACCTGCATGATGTTGATTGGTATG 59.660 41.667 0.00 0.00 0.00 2.39
3634 4447 4.581409 CCTGCATGATGTTGATTGGTATGA 59.419 41.667 0.00 0.00 0.00 2.15
3635 4448 5.068067 CCTGCATGATGTTGATTGGTATGAA 59.932 40.000 0.00 0.00 0.00 2.57
3636 4449 6.406065 CCTGCATGATGTTGATTGGTATGAAA 60.406 38.462 0.00 0.00 0.00 2.69
3637 4450 6.932947 TGCATGATGTTGATTGGTATGAAAA 58.067 32.000 0.00 0.00 0.00 2.29
3638 4451 7.036829 TGCATGATGTTGATTGGTATGAAAAG 58.963 34.615 0.00 0.00 0.00 2.27
3639 4452 7.093858 TGCATGATGTTGATTGGTATGAAAAGA 60.094 33.333 0.00 0.00 0.00 2.52
3640 4453 7.924412 GCATGATGTTGATTGGTATGAAAAGAT 59.076 33.333 0.00 0.00 0.00 2.40
3641 4454 9.244799 CATGATGTTGATTGGTATGAAAAGATG 57.755 33.333 0.00 0.00 0.00 2.90
3642 4455 8.352137 TGATGTTGATTGGTATGAAAAGATGT 57.648 30.769 0.00 0.00 0.00 3.06
3643 4456 8.245491 TGATGTTGATTGGTATGAAAAGATGTG 58.755 33.333 0.00 0.00 0.00 3.21
3644 4457 7.757941 TGTTGATTGGTATGAAAAGATGTGA 57.242 32.000 0.00 0.00 0.00 3.58
3645 4458 8.175925 TGTTGATTGGTATGAAAAGATGTGAA 57.824 30.769 0.00 0.00 0.00 3.18
3646 4459 8.637099 TGTTGATTGGTATGAAAAGATGTGAAA 58.363 29.630 0.00 0.00 0.00 2.69
3647 4460 9.474920 GTTGATTGGTATGAAAAGATGTGAAAA 57.525 29.630 0.00 0.00 0.00 2.29
3648 4461 9.695526 TTGATTGGTATGAAAAGATGTGAAAAG 57.304 29.630 0.00 0.00 0.00 2.27
3649 4462 8.306038 TGATTGGTATGAAAAGATGTGAAAAGG 58.694 33.333 0.00 0.00 0.00 3.11
3650 4463 7.595819 TTGGTATGAAAAGATGTGAAAAGGT 57.404 32.000 0.00 0.00 0.00 3.50
3651 4464 6.980593 TGGTATGAAAAGATGTGAAAAGGTG 58.019 36.000 0.00 0.00 0.00 4.00
3652 4465 6.775142 TGGTATGAAAAGATGTGAAAAGGTGA 59.225 34.615 0.00 0.00 0.00 4.02
3653 4466 7.084486 GGTATGAAAAGATGTGAAAAGGTGAC 58.916 38.462 0.00 0.00 0.00 3.67
3686 4499 9.827411 GTCAGGTGACTTAAAATCAGTAAAATC 57.173 33.333 2.72 0.00 41.65 2.17
3687 4500 9.567776 TCAGGTGACTTAAAATCAGTAAAATCA 57.432 29.630 0.00 0.00 40.21 2.57
3688 4501 9.831737 CAGGTGACTTAAAATCAGTAAAATCAG 57.168 33.333 0.00 0.00 40.21 2.90
3689 4502 9.014297 AGGTGACTTAAAATCAGTAAAATCAGG 57.986 33.333 0.00 0.00 37.44 3.86
3690 4503 8.793592 GGTGACTTAAAATCAGTAAAATCAGGT 58.206 33.333 0.00 0.00 0.00 4.00
3691 4504 9.612620 GTGACTTAAAATCAGTAAAATCAGGTG 57.387 33.333 0.00 0.00 0.00 4.00
3692 4505 9.567776 TGACTTAAAATCAGTAAAATCAGGTGA 57.432 29.630 0.00 0.00 0.00 4.02
3709 4522 7.372451 TCAGGTGATTTATTAGAACCAAACG 57.628 36.000 0.00 0.00 33.13 3.60
3710 4523 6.373216 TCAGGTGATTTATTAGAACCAAACGG 59.627 38.462 0.00 0.00 33.13 4.44
3711 4524 6.150474 CAGGTGATTTATTAGAACCAAACGGT 59.850 38.462 0.00 0.00 38.95 4.83
3712 4525 6.373495 AGGTGATTTATTAGAACCAAACGGTC 59.627 38.462 0.00 0.00 34.92 4.79
3713 4526 6.245724 GTGATTTATTAGAACCAAACGGTCG 58.754 40.000 0.00 0.00 34.92 4.79
3714 4527 4.666928 TTTATTAGAACCAAACGGTCGC 57.333 40.909 0.00 0.00 34.92 5.19
3715 4528 2.467566 ATTAGAACCAAACGGTCGCT 57.532 45.000 0.00 0.00 34.92 4.93
3716 4529 3.598019 ATTAGAACCAAACGGTCGCTA 57.402 42.857 0.00 0.00 34.92 4.26
3717 4530 3.383620 TTAGAACCAAACGGTCGCTAA 57.616 42.857 0.00 0.00 34.92 3.09
3718 4531 2.243602 AGAACCAAACGGTCGCTAAA 57.756 45.000 0.00 0.00 34.92 1.85
3724 4537 3.315749 ACCAAACGGTCGCTAAATTTTCA 59.684 39.130 0.00 0.00 26.76 2.69
3749 4562 2.521465 CCAGTTGCCTGCCCAACA 60.521 61.111 12.54 0.00 45.73 3.33
3977 4838 2.825836 GCATCGTCCCAAGGGCAG 60.826 66.667 0.00 0.00 34.68 4.85
3996 4862 6.899631 AGGGCAGTATCATATCATATGTCTCA 59.100 38.462 4.52 0.00 0.00 3.27
4007 4873 2.385013 TATGTCTCATGTGCTTGCGT 57.615 45.000 0.00 0.00 0.00 5.24
4045 4911 6.111768 CGTACTACGTACTGGAGTAATTGT 57.888 41.667 10.20 0.00 36.93 2.71
4061 4927 1.441738 TTGTGACGGAGATCGACGTA 58.558 50.000 15.83 0.88 44.24 3.57
4090 4961 2.061773 AGACTCAGTTTTGACGCATCG 58.938 47.619 0.00 0.00 0.00 3.84
4102 4973 3.204827 GCATCGCGTCAGCCCAAT 61.205 61.111 5.77 0.00 41.18 3.16
4218 5134 5.711506 TGTGATGTACAAATGCAGATTCCTT 59.288 36.000 0.00 0.00 36.06 3.36
4468 5393 1.186200 CCTCACCGTCTTCCTCATCA 58.814 55.000 0.00 0.00 0.00 3.07
4593 5518 0.909610 TCGGCCTCTTCCTGTCCATT 60.910 55.000 0.00 0.00 0.00 3.16
4800 5746 1.378762 GGGGCTGTTCCTTAGCACA 59.621 57.895 1.41 0.00 46.30 4.57
4863 5815 2.034066 CACAAGGTCACCGGCCAT 59.966 61.111 0.00 0.00 0.00 4.40
5096 6054 0.032130 ATGCCTGCGTCCGTGTATAG 59.968 55.000 0.00 0.00 0.00 1.31
5106 6064 4.340894 GTCCGTGTATAGACGTGTAACA 57.659 45.455 19.62 0.00 37.66 2.41
5147 6105 5.643664 TCTTTGTCACGTACGTATTGCTAT 58.356 37.500 22.34 0.00 0.00 2.97
5160 6118 6.303839 ACGTATTGCTATCCCACCAATTATT 58.696 36.000 0.00 0.00 32.07 1.40
5224 6193 4.051922 GCACTGTCGGGTGATAATCTAAG 58.948 47.826 7.94 0.00 39.34 2.18
5231 6200 6.778069 TGTCGGGTGATAATCTAAGAAGATCT 59.222 38.462 0.00 0.00 41.81 2.75
5282 6251 2.303175 GAATAGCCGTCTGGTCTCTCT 58.697 52.381 0.00 0.00 37.67 3.10
5285 6254 0.033601 AGCCGTCTGGTCTCTCTCAT 60.034 55.000 0.00 0.00 37.67 2.90
5288 6257 2.746803 GCCGTCTGGTCTCTCTCATCTA 60.747 54.545 0.00 0.00 37.67 1.98
5306 6275 1.063174 CTAAGCGCTAGCCTTTGCAAG 59.937 52.381 12.05 10.56 46.67 4.01
5331 6300 2.930040 GCTACTGTTGCGCTTGATTCTA 59.070 45.455 9.73 0.00 0.00 2.10
5342 6311 3.374988 CGCTTGATTCTATGCAACAGGAA 59.625 43.478 0.00 0.00 0.00 3.36
5344 6313 4.397417 GCTTGATTCTATGCAACAGGAACT 59.603 41.667 0.00 0.00 43.88 3.01
5345 6314 5.448360 GCTTGATTCTATGCAACAGGAACTC 60.448 44.000 0.00 0.00 34.60 3.01
5346 6315 4.517285 TGATTCTATGCAACAGGAACTCC 58.483 43.478 0.00 0.00 34.60 3.85
5348 6317 4.640771 TTCTATGCAACAGGAACTCCTT 57.359 40.909 0.00 0.00 46.09 3.36
5424 6434 8.193438 TCATTGTAACATCACACATGTTTCAAA 58.807 29.630 17.79 5.76 45.40 2.69
5437 6449 4.582701 TGTTTCAAAACACATAGCCCTG 57.417 40.909 4.24 0.00 43.45 4.45
5438 6450 3.957497 TGTTTCAAAACACATAGCCCTGT 59.043 39.130 4.24 0.00 43.45 4.00
5484 6496 6.155393 ACAAATGTTTTAGAAACAGAACCCCA 59.845 34.615 11.34 0.00 33.18 4.96
5509 6523 2.158971 GCAAACACCAAATCCCAACACT 60.159 45.455 0.00 0.00 0.00 3.55
5513 6527 5.722021 AACACCAAATCCCAACACTATTC 57.278 39.130 0.00 0.00 0.00 1.75
5515 6529 4.085733 CACCAAATCCCAACACTATTCCA 58.914 43.478 0.00 0.00 0.00 3.53
5520 6534 3.981071 TCCCAACACTATTCCAGTCAG 57.019 47.619 0.00 0.00 34.26 3.51
5543 6686 0.314935 CATTGCAGTCACAACCCCAC 59.685 55.000 0.00 0.00 31.03 4.61
5552 6695 2.124067 CAACCCCACCACCGTTGT 60.124 61.111 0.00 0.00 33.72 3.32
5553 6696 2.124067 AACCCCACCACCGTTGTG 60.124 61.111 0.00 0.00 42.39 3.33
5650 6794 2.279851 CAACACCGACACGCCTCA 60.280 61.111 0.00 0.00 0.00 3.86
5652 6796 1.070786 AACACCGACACGCCTCAAT 59.929 52.632 0.00 0.00 0.00 2.57
5677 6822 2.226437 AGTGTTGGTCGATGTTTCATGC 59.774 45.455 0.00 0.00 0.00 4.06
5680 6825 1.358877 TGGTCGATGTTTCATGCTCG 58.641 50.000 0.00 0.00 0.00 5.03
5716 6861 3.434319 GCATCAGCCGTGGTGGTG 61.434 66.667 10.74 10.74 43.92 4.17
5717 6862 2.032528 CATCAGCCGTGGTGGTGT 59.967 61.111 7.83 0.00 37.38 4.16
5718 6863 2.034879 CATCAGCCGTGGTGGTGTC 61.035 63.158 7.83 0.00 37.38 3.67
5719 6864 3.254024 ATCAGCCGTGGTGGTGTCC 62.254 63.158 3.77 0.00 41.21 4.02
5734 6879 1.291272 GTCCCGTGGTGGTGTCTAC 59.709 63.158 0.00 0.00 35.15 2.59
5821 7802 5.428184 AGAAGACTCGATGAAGGGAAAAT 57.572 39.130 0.00 0.00 0.00 1.82
5828 7809 2.164219 CGATGAAGGGAAAATGTGTGGG 59.836 50.000 0.00 0.00 0.00 4.61
5856 7837 3.699038 GCATTTGCTGGGATAAGGTTGTA 59.301 43.478 0.00 0.00 38.21 2.41
5860 7841 3.884895 TGCTGGGATAAGGTTGTATGTG 58.115 45.455 0.00 0.00 0.00 3.21
5865 7846 5.865085 TGGGATAAGGTTGTATGTGATAGC 58.135 41.667 0.00 0.00 0.00 2.97
5878 7859 3.334891 ATAGCGTTGGGTGGGCCA 61.335 61.111 0.00 0.00 36.17 5.36
5883 7866 1.303724 CGTTGGGTGGGCCAACATA 60.304 57.895 25.48 9.01 45.26 2.29
5891 7874 1.274728 GTGGGCCAACATAAACATGCA 59.725 47.619 8.40 0.00 0.00 3.96
5907 7890 1.226773 GCATCATGCAACCGAAGCC 60.227 57.895 4.20 0.00 44.26 4.35
5909 7892 0.099968 CATCATGCAACCGAAGCCAG 59.900 55.000 0.00 0.00 0.00 4.85
5910 7893 0.322816 ATCATGCAACCGAAGCCAGT 60.323 50.000 0.00 0.00 0.00 4.00
5911 7894 0.537143 TCATGCAACCGAAGCCAGTT 60.537 50.000 0.00 0.00 0.00 3.16
5914 7897 0.107831 TGCAACCGAAGCCAGTTACT 59.892 50.000 0.00 0.00 0.00 2.24
5963 7959 6.210584 CCAAAAAGAAAAGCATAGTCCCCTTA 59.789 38.462 0.00 0.00 0.00 2.69
5966 7962 3.783082 AGAAAAGCATAGTCCCCTTAGCT 59.217 43.478 0.00 0.00 32.85 3.32
5967 7963 3.567478 AAAGCATAGTCCCCTTAGCTG 57.433 47.619 0.00 0.00 32.15 4.24
5968 7964 1.428869 AGCATAGTCCCCTTAGCTGG 58.571 55.000 0.00 0.00 31.05 4.85
5969 7965 1.062121 AGCATAGTCCCCTTAGCTGGA 60.062 52.381 0.00 0.00 31.05 3.86
5970 7966 1.768870 GCATAGTCCCCTTAGCTGGAA 59.231 52.381 0.00 0.00 31.03 3.53
5971 7967 2.224402 GCATAGTCCCCTTAGCTGGAAG 60.224 54.545 0.00 0.00 31.03 3.46
5997 7993 5.663456 TGTAAACTTCAAACTGTCTACCGT 58.337 37.500 0.00 0.00 0.00 4.83
6001 7997 3.118884 ACTTCAAACTGTCTACCGTGTGT 60.119 43.478 0.00 0.00 0.00 3.72
6008 8004 4.304110 ACTGTCTACCGTGTGTTAACATG 58.696 43.478 12.26 5.11 42.11 3.21
6010 8006 4.695396 TGTCTACCGTGTGTTAACATGTT 58.305 39.130 16.68 16.68 41.06 2.71
6037 8033 2.084610 TGAGAAGCACCATCTTGACG 57.915 50.000 0.00 0.00 0.00 4.35
6038 8034 0.723981 GAGAAGCACCATCTTGACGC 59.276 55.000 0.00 0.00 0.00 5.19
6040 8036 2.568935 GAAGCACCATCTTGACGCGC 62.569 60.000 5.73 0.00 0.00 6.86
6042 8038 4.505217 CACCATCTTGACGCGCGC 62.505 66.667 32.58 23.91 0.00 6.86
6059 8055 2.949030 GCGCGCACACACACACATA 61.949 57.895 29.10 0.00 0.00 2.29
6060 8056 1.154672 CGCGCACACACACACATAC 60.155 57.895 8.75 0.00 0.00 2.39
6061 8057 1.826299 CGCGCACACACACACATACA 61.826 55.000 8.75 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.245531 CAGTGGGCTACAAATTTACTCAGA 58.754 41.667 3.15 0.00 0.00 3.27
2 3 3.756434 GCAGTGGGCTACAAATTTACTCA 59.244 43.478 3.15 0.00 40.25 3.41
35 36 5.041951 TCTTTCGCTCGCAATATTTTTGT 57.958 34.783 0.00 0.00 0.00 2.83
51 52 9.435688 TTTACCATACATGATCCATATCTTTCG 57.564 33.333 0.00 0.00 32.93 3.46
239 241 9.439500 TTGAGTTTATAAGTTAGGCACGTATTT 57.561 29.630 0.00 0.00 32.81 1.40
278 280 2.223525 GCTAACCGCGGGCTCTATATAG 60.224 54.545 31.76 17.11 0.00 1.31
291 293 5.192327 TGGTTAATAGTAGAGCTAACCGC 57.808 43.478 6.34 0.00 44.15 5.68
315 317 4.767409 ACAGAGGGAGTATTTTCCAAAAGC 59.233 41.667 0.00 0.00 39.09 3.51
317 319 7.066781 AGAAACAGAGGGAGTATTTTCCAAAA 58.933 34.615 0.00 0.00 39.09 2.44
526 528 9.856488 GAAGTATTAATCCCCTGTTTCTTTTTC 57.144 33.333 0.00 0.00 0.00 2.29
538 540 5.855045 AGATGACACGAAGTATTAATCCCC 58.145 41.667 0.00 0.00 41.61 4.81
539 541 6.513180 TGAGATGACACGAAGTATTAATCCC 58.487 40.000 0.00 0.00 41.61 3.85
549 551 1.350193 CGGGTTGAGATGACACGAAG 58.650 55.000 0.00 0.00 46.34 3.79
550 552 0.037697 CCGGGTTGAGATGACACGAA 60.038 55.000 0.00 0.00 46.34 3.85
606 608 4.654091 TCCCAGAAGCTCAAACAAAAAG 57.346 40.909 0.00 0.00 0.00 2.27
608 610 5.413309 TTTTCCCAGAAGCTCAAACAAAA 57.587 34.783 0.00 0.00 0.00 2.44
661 1069 8.627403 CATGACTCTGGCACTCATTAATTAATT 58.373 33.333 8.01 5.89 0.00 1.40
671 1079 0.545071 TCCCATGACTCTGGCACTCA 60.545 55.000 0.00 0.00 34.77 3.41
696 1104 2.937959 ATCTCCTGTCTCCCGGGCTC 62.938 65.000 18.49 9.11 39.73 4.70
698 1106 1.152525 TATCTCCTGTCTCCCGGGC 60.153 63.158 18.49 1.66 39.73 6.13
730 1138 1.176619 TCGTCGTCTCCTTCTGCCAA 61.177 55.000 0.00 0.00 0.00 4.52
745 1153 8.928733 TGATTAGTTTGTGGTTAATTAGTCGTC 58.071 33.333 0.00 0.00 0.00 4.20
823 1231 0.759436 GGGAAGCCGGTGGATCTCTA 60.759 60.000 1.90 0.00 0.00 2.43
874 1282 1.065926 GTGATGATGCTGGTGGAGTGA 60.066 52.381 0.00 0.00 0.00 3.41
928 1340 1.371558 CAGCCGGGGAATAGGTAGC 59.628 63.158 2.18 0.00 0.00 3.58
931 1343 2.366972 AGCAGCCGGGGAATAGGT 60.367 61.111 2.18 0.00 0.00 3.08
993 1406 2.249413 CTTCCGTGCCCATCTCTGCT 62.249 60.000 0.00 0.00 0.00 4.24
1060 1473 2.508663 GTAGTCCCAAGCGTCCGC 60.509 66.667 2.94 2.94 42.33 5.54
1068 1481 3.074281 CGGCCCTTGTAGTCCCAA 58.926 61.111 0.00 0.00 0.00 4.12
1153 1566 4.038080 CAAAACGACAGGGGCGCC 62.038 66.667 21.18 21.18 0.00 6.53
1213 1632 0.248825 CTCAGCTCTCCATTCGTCCG 60.249 60.000 0.00 0.00 0.00 4.79
1227 1646 5.392811 CCTTCACCAAAATCAAGATCTCAGC 60.393 44.000 0.00 0.00 0.00 4.26
1239 1658 1.586154 CTCCGCGCCTTCACCAAAAT 61.586 55.000 0.00 0.00 0.00 1.82
1294 1713 0.321210 TCATGTACGGCACCAGGTTG 60.321 55.000 0.00 0.00 0.00 3.77
1360 1779 0.693049 AGGAGGTGCCGATGAAGTTT 59.307 50.000 0.00 0.00 43.43 2.66
1444 1863 2.154798 CTTGGACGGCGGAGAAGACA 62.155 60.000 13.24 0.00 0.00 3.41
1482 1984 0.168788 CGTGCAACTGTGGCTTATGG 59.831 55.000 8.88 0.00 31.75 2.74
1513 2019 7.317390 TCGATTAAACTATGCAAGTCAGTACA 58.683 34.615 0.00 0.00 37.50 2.90
1530 2040 3.342377 TCACACCCTGCATCGATTAAA 57.658 42.857 0.00 0.00 0.00 1.52
1532 2042 2.433970 TCATCACACCCTGCATCGATTA 59.566 45.455 0.00 0.00 0.00 1.75
1657 2173 2.529136 AGCCCCAGGTACAGCACA 60.529 61.111 0.00 0.00 0.00 4.57
1726 2242 2.203523 TCGAACTGGTCCGACCCA 60.204 61.111 15.24 2.61 37.50 4.51
1999 2515 2.188994 GAGCGCTTCCTCCATGCT 59.811 61.111 13.26 0.00 38.89 3.79
2192 2708 7.469732 GCTCGTCTACCAGGTTAATTACTACAT 60.470 40.741 0.00 0.00 0.00 2.29
2194 2710 6.039159 AGCTCGTCTACCAGGTTAATTACTAC 59.961 42.308 0.00 0.00 0.00 2.73
2195 2711 6.125029 AGCTCGTCTACCAGGTTAATTACTA 58.875 40.000 0.00 0.00 0.00 1.82
2196 2712 4.954826 AGCTCGTCTACCAGGTTAATTACT 59.045 41.667 0.00 0.00 0.00 2.24
2197 2713 5.067544 AGAGCTCGTCTACCAGGTTAATTAC 59.932 44.000 8.37 0.00 31.71 1.89
2198 2714 5.198965 AGAGCTCGTCTACCAGGTTAATTA 58.801 41.667 8.37 0.00 31.71 1.40
2200 2716 3.633418 AGAGCTCGTCTACCAGGTTAAT 58.367 45.455 8.37 0.00 31.71 1.40
2209 2725 4.062677 TCTTCTCCTAGAGCTCGTCTAC 57.937 50.000 8.37 0.00 36.64 2.59
2218 2740 6.957920 TGTCAGATGATTCTTCTCCTAGAG 57.042 41.667 0.00 0.00 0.00 2.43
2228 2750 7.551974 CCTGATACAACTTTGTCAGATGATTCT 59.448 37.037 10.79 0.00 42.35 2.40
2308 2831 2.322638 GATGAGCTCCCTGGCTGGAC 62.323 65.000 12.15 1.09 43.20 4.02
2427 2964 2.097304 TGCATGTGTTGTGAGTTGTGAC 59.903 45.455 0.00 0.00 0.00 3.67
2555 3093 5.405063 TCCCCTAGTGTCTATTCTAGCTT 57.595 43.478 0.00 0.00 34.18 3.74
2610 3148 3.140325 AGTGGCGAGATTCCTCAAAAA 57.860 42.857 0.00 0.00 39.39 1.94
2611 3149 2.859165 AGTGGCGAGATTCCTCAAAA 57.141 45.000 0.00 0.00 39.39 2.44
2612 3150 2.859165 AAGTGGCGAGATTCCTCAAA 57.141 45.000 0.00 0.00 39.39 2.69
2613 3151 2.859165 AAAGTGGCGAGATTCCTCAA 57.141 45.000 0.00 0.00 39.39 3.02
2614 3152 4.487714 AATAAAGTGGCGAGATTCCTCA 57.512 40.909 0.00 0.00 39.39 3.86
2615 3153 5.106908 GCATAATAAAGTGGCGAGATTCCTC 60.107 44.000 0.00 0.00 36.08 3.71
2616 3154 4.757149 GCATAATAAAGTGGCGAGATTCCT 59.243 41.667 0.00 0.00 0.00 3.36
2617 3155 4.515191 TGCATAATAAAGTGGCGAGATTCC 59.485 41.667 0.00 0.00 0.00 3.01
2618 3156 5.673337 TGCATAATAAAGTGGCGAGATTC 57.327 39.130 0.00 0.00 0.00 2.52
2619 3157 6.639632 ATTGCATAATAAAGTGGCGAGATT 57.360 33.333 0.00 0.00 0.00 2.40
2620 3158 7.161404 TCTATTGCATAATAAAGTGGCGAGAT 58.839 34.615 0.00 0.00 0.00 2.75
2621 3159 6.521162 TCTATTGCATAATAAAGTGGCGAGA 58.479 36.000 0.00 0.00 0.00 4.04
2622 3160 6.785488 TCTATTGCATAATAAAGTGGCGAG 57.215 37.500 0.00 0.00 0.00 5.03
2623 3161 6.989759 TCTTCTATTGCATAATAAAGTGGCGA 59.010 34.615 0.00 0.00 0.00 5.54
2624 3162 7.189693 TCTTCTATTGCATAATAAAGTGGCG 57.810 36.000 0.00 0.00 0.00 5.69
2625 3163 9.403110 CAATCTTCTATTGCATAATAAAGTGGC 57.597 33.333 0.00 0.00 0.00 5.01
2643 3181 8.887717 GCTTGACACTTGATATTACAATCTTCT 58.112 33.333 0.00 0.00 0.00 2.85
2644 3182 8.668353 TGCTTGACACTTGATATTACAATCTTC 58.332 33.333 0.00 0.00 0.00 2.87
2645 3183 8.565896 TGCTTGACACTTGATATTACAATCTT 57.434 30.769 0.00 0.00 0.00 2.40
2646 3184 8.565896 TTGCTTGACACTTGATATTACAATCT 57.434 30.769 0.00 0.00 0.00 2.40
2647 3185 9.282247 CTTTGCTTGACACTTGATATTACAATC 57.718 33.333 0.00 0.00 0.00 2.67
2648 3186 7.756722 GCTTTGCTTGACACTTGATATTACAAT 59.243 33.333 0.00 0.00 0.00 2.71
2649 3187 7.040478 AGCTTTGCTTGACACTTGATATTACAA 60.040 33.333 0.00 0.00 33.89 2.41
2650 3188 6.430925 AGCTTTGCTTGACACTTGATATTACA 59.569 34.615 0.00 0.00 33.89 2.41
2651 3189 6.846350 AGCTTTGCTTGACACTTGATATTAC 58.154 36.000 0.00 0.00 33.89 1.89
2652 3190 7.201644 GCTAGCTTTGCTTGACACTTGATATTA 60.202 37.037 7.70 0.00 40.44 0.98
2653 3191 5.972107 AGCTTTGCTTGACACTTGATATT 57.028 34.783 0.00 0.00 33.89 1.28
2654 3192 5.065731 GCTAGCTTTGCTTGACACTTGATAT 59.934 40.000 7.70 0.00 40.44 1.63
2745 3321 4.957259 CAATCGATCGCGCGCGTG 62.957 66.667 46.54 36.12 40.74 5.34
2747 3323 4.386244 CTCAATCGATCGCGCGCG 62.386 66.667 44.84 44.84 41.35 6.86
2748 3324 2.860628 AACTCAATCGATCGCGCGC 61.861 57.895 27.95 23.91 37.46 6.86
2749 3325 1.084666 CAACTCAATCGATCGCGCG 60.085 57.895 26.76 26.76 37.46 6.86
2750 3326 1.273887 CCAACTCAATCGATCGCGC 59.726 57.895 11.09 0.00 37.46 6.86
3029 3841 4.332828 AGAGTAATTTCTTTTCCGGGTGG 58.667 43.478 0.00 0.00 0.00 4.61
3031 3843 5.500546 AGAGAGTAATTTCTTTTCCGGGT 57.499 39.130 0.00 0.00 0.00 5.28
3032 3844 5.123979 CCAAGAGAGTAATTTCTTTTCCGGG 59.876 44.000 0.00 0.00 31.53 5.73
3035 3847 9.014297 TGAATCCAAGAGAGTAATTTCTTTTCC 57.986 33.333 0.00 0.00 31.53 3.13
3051 3863 6.708502 TCACGACACTTATTTTGAATCCAAGA 59.291 34.615 0.00 0.00 33.23 3.02
3054 3866 7.447374 AATCACGACACTTATTTTGAATCCA 57.553 32.000 0.00 0.00 0.00 3.41
3055 3867 8.742554 AAAATCACGACACTTATTTTGAATCC 57.257 30.769 0.00 0.00 31.99 3.01
3089 3902 6.348621 TGAGTGTCGTGGTTTTAGTTTAAC 57.651 37.500 0.00 0.00 0.00 2.01
3144 3957 4.261994 GGGTGAGCATAAACTTTTTGCTGA 60.262 41.667 20.19 11.82 46.21 4.26
3154 3967 1.092348 GAACCGGGGTGAGCATAAAC 58.908 55.000 6.32 0.00 0.00 2.01
3155 3968 0.693622 TGAACCGGGGTGAGCATAAA 59.306 50.000 6.32 0.00 0.00 1.40
3158 3971 1.140312 ATATGAACCGGGGTGAGCAT 58.860 50.000 6.32 2.36 0.00 3.79
3160 3973 2.922740 TAATATGAACCGGGGTGAGC 57.077 50.000 6.32 0.00 0.00 4.26
3162 3975 5.118729 ACAATTAATATGAACCGGGGTGA 57.881 39.130 6.32 0.00 0.00 4.02
3166 3979 3.813166 AGCGACAATTAATATGAACCGGG 59.187 43.478 6.32 0.00 0.00 5.73
3170 3983 7.915397 ACCAAATCAGCGACAATTAATATGAAC 59.085 33.333 0.00 0.00 0.00 3.18
3176 3989 6.751514 TGTACCAAATCAGCGACAATTAAT 57.248 33.333 0.00 0.00 0.00 1.40
3186 3999 6.509418 TGGTTAGAATTGTACCAAATCAGC 57.491 37.500 0.00 0.00 38.92 4.26
3187 4000 8.279970 TCATGGTTAGAATTGTACCAAATCAG 57.720 34.615 6.92 0.00 44.49 2.90
3231 4044 2.693797 TCTGTGTAACGTTCCGACTC 57.306 50.000 2.82 0.00 42.39 3.36
3240 4053 4.274950 ACCCATCAAAGTTTCTGTGTAACG 59.725 41.667 0.00 0.00 42.39 3.18
3256 4069 5.269554 ACTTTCCCTAAATTGACCCATCA 57.730 39.130 0.00 0.00 0.00 3.07
3283 4096 1.372087 GCTATGGCTGCTTCTTGCGT 61.372 55.000 0.00 0.00 46.63 5.24
3312 4125 4.592942 AGATGCCTCTCACATAAAAGCAA 58.407 39.130 0.00 0.00 31.73 3.91
3345 4158 2.416747 CATTGCACGTTTCTCTCTCCA 58.583 47.619 0.00 0.00 0.00 3.86
3346 4159 1.129437 GCATTGCACGTTTCTCTCTCC 59.871 52.381 3.15 0.00 0.00 3.71
3376 4189 1.521681 GATCTCGGCCGAACCCAAG 60.522 63.158 30.53 16.53 33.26 3.61
3443 4256 6.695713 GTGACTTAATTGAAACCAAACAGACC 59.304 38.462 0.00 0.00 0.00 3.85
3444 4257 7.480810 AGTGACTTAATTGAAACCAAACAGAC 58.519 34.615 0.00 0.00 0.00 3.51
3445 4258 7.639113 AGTGACTTAATTGAAACCAAACAGA 57.361 32.000 0.00 0.00 0.00 3.41
3446 4259 9.233232 GTTAGTGACTTAATTGAAACCAAACAG 57.767 33.333 0.00 0.00 0.00 3.16
3447 4260 8.962679 AGTTAGTGACTTAATTGAAACCAAACA 58.037 29.630 0.00 0.00 33.92 2.83
3448 4261 9.797556 AAGTTAGTGACTTAATTGAAACCAAAC 57.202 29.630 0.00 0.00 46.61 2.93
3485 4298 9.646427 TGACAAAATAAGTTACTTTTTGCACTT 57.354 25.926 17.24 3.64 41.69 3.16
3486 4299 9.646427 TTGACAAAATAAGTTACTTTTTGCACT 57.354 25.926 17.24 3.91 41.69 4.40
3505 4318 7.558444 ACTTATAAGTTGGGTCTGTTTGACAAA 59.442 33.333 12.50 0.00 40.94 2.83
3506 4319 7.057894 ACTTATAAGTTGGGTCTGTTTGACAA 58.942 34.615 12.50 0.00 40.94 3.18
3507 4320 6.597562 ACTTATAAGTTGGGTCTGTTTGACA 58.402 36.000 12.50 0.00 40.94 3.58
3508 4321 6.708949 TGACTTATAAGTTGGGTCTGTTTGAC 59.291 38.462 18.96 2.46 41.15 3.18
3509 4322 6.708949 GTGACTTATAAGTTGGGTCTGTTTGA 59.291 38.462 18.96 0.00 39.88 2.69
3510 4323 6.710744 AGTGACTTATAAGTTGGGTCTGTTTG 59.289 38.462 18.96 0.00 39.88 2.93
3511 4324 6.838382 AGTGACTTATAAGTTGGGTCTGTTT 58.162 36.000 18.96 0.00 39.88 2.83
3512 4325 6.435292 AGTGACTTATAAGTTGGGTCTGTT 57.565 37.500 18.96 0.00 39.88 3.16
3513 4326 5.046520 GGAGTGACTTATAAGTTGGGTCTGT 60.047 44.000 18.96 0.00 39.88 3.41
3514 4327 5.046591 TGGAGTGACTTATAAGTTGGGTCTG 60.047 44.000 18.96 0.00 39.88 3.51
3515 4328 5.091552 TGGAGTGACTTATAAGTTGGGTCT 58.908 41.667 18.96 12.32 39.88 3.85
3516 4329 5.416271 TGGAGTGACTTATAAGTTGGGTC 57.584 43.478 18.96 12.77 39.88 4.46
3517 4330 5.309806 AGTTGGAGTGACTTATAAGTTGGGT 59.690 40.000 18.96 5.19 39.88 4.51
3518 4331 5.805728 AGTTGGAGTGACTTATAAGTTGGG 58.194 41.667 18.96 0.00 39.88 4.12
3528 4341 9.877178 CTTATGACTTATAAGTTGGAGTGACTT 57.123 33.333 18.96 5.26 42.11 3.01
3541 4354 7.147391 TGGGATGGAGCAACTTATGACTTATAA 60.147 37.037 0.00 0.00 0.00 0.98
3542 4355 6.328934 TGGGATGGAGCAACTTATGACTTATA 59.671 38.462 0.00 0.00 0.00 0.98
3543 4356 5.132648 TGGGATGGAGCAACTTATGACTTAT 59.867 40.000 0.00 0.00 0.00 1.73
3544 4357 4.473196 TGGGATGGAGCAACTTATGACTTA 59.527 41.667 0.00 0.00 0.00 2.24
3545 4358 3.266772 TGGGATGGAGCAACTTATGACTT 59.733 43.478 0.00 0.00 0.00 3.01
3546 4359 2.846206 TGGGATGGAGCAACTTATGACT 59.154 45.455 0.00 0.00 0.00 3.41
3547 4360 3.281727 TGGGATGGAGCAACTTATGAC 57.718 47.619 0.00 0.00 0.00 3.06
3548 4361 3.266772 AGTTGGGATGGAGCAACTTATGA 59.733 43.478 0.00 0.00 34.63 2.15
3549 4362 3.624777 AGTTGGGATGGAGCAACTTATG 58.375 45.455 0.00 0.00 34.63 1.90
3550 4363 3.266772 TGAGTTGGGATGGAGCAACTTAT 59.733 43.478 0.00 0.00 37.92 1.73
3551 4364 2.642311 TGAGTTGGGATGGAGCAACTTA 59.358 45.455 0.00 0.00 37.92 2.24
3552 4365 1.425066 TGAGTTGGGATGGAGCAACTT 59.575 47.619 0.00 0.00 37.92 2.66
3553 4366 1.067295 TGAGTTGGGATGGAGCAACT 58.933 50.000 0.00 0.00 40.16 3.16
3554 4367 1.909700 TTGAGTTGGGATGGAGCAAC 58.090 50.000 0.00 0.00 0.00 4.17
3555 4368 2.627699 GTTTTGAGTTGGGATGGAGCAA 59.372 45.455 0.00 0.00 0.00 3.91
3556 4369 2.158475 AGTTTTGAGTTGGGATGGAGCA 60.158 45.455 0.00 0.00 0.00 4.26
3557 4370 2.519013 AGTTTTGAGTTGGGATGGAGC 58.481 47.619 0.00 0.00 0.00 4.70
3558 4371 7.611855 ACTTATAAGTTTTGAGTTGGGATGGAG 59.388 37.037 12.50 0.00 35.21 3.86
3559 4372 7.466804 ACTTATAAGTTTTGAGTTGGGATGGA 58.533 34.615 12.50 0.00 35.21 3.41
3560 4373 7.393234 TGACTTATAAGTTTTGAGTTGGGATGG 59.607 37.037 18.96 0.00 39.88 3.51
3561 4374 8.237267 GTGACTTATAAGTTTTGAGTTGGGATG 58.763 37.037 18.96 0.00 39.88 3.51
3562 4375 7.393515 GGTGACTTATAAGTTTTGAGTTGGGAT 59.606 37.037 18.96 0.00 39.88 3.85
3563 4376 6.713450 GGTGACTTATAAGTTTTGAGTTGGGA 59.287 38.462 18.96 0.00 39.88 4.37
3564 4377 6.715264 AGGTGACTTATAAGTTTTGAGTTGGG 59.285 38.462 18.96 0.00 39.88 4.12
3565 4378 7.094762 GGAGGTGACTTATAAGTTTTGAGTTGG 60.095 40.741 18.96 0.00 44.43 3.77
3566 4379 7.661847 AGGAGGTGACTTATAAGTTTTGAGTTG 59.338 37.037 18.96 0.00 44.43 3.16
3567 4380 7.746703 AGGAGGTGACTTATAAGTTTTGAGTT 58.253 34.615 18.96 2.77 44.43 3.01
3568 4381 7.317722 AGGAGGTGACTTATAAGTTTTGAGT 57.682 36.000 18.96 3.20 44.43 3.41
3569 4382 8.622948 AAAGGAGGTGACTTATAAGTTTTGAG 57.377 34.615 18.96 0.00 44.43 3.02
3570 4383 8.990163 AAAAGGAGGTGACTTATAAGTTTTGA 57.010 30.769 18.96 2.12 44.43 2.69
3572 4385 8.996271 CGTAAAAGGAGGTGACTTATAAGTTTT 58.004 33.333 18.96 14.10 44.43 2.43
3573 4386 8.152898 ACGTAAAAGGAGGTGACTTATAAGTTT 58.847 33.333 18.96 8.71 44.43 2.66
3574 4387 7.601508 CACGTAAAAGGAGGTGACTTATAAGTT 59.398 37.037 18.96 3.42 44.43 2.66
3575 4388 7.095270 CACGTAAAAGGAGGTGACTTATAAGT 58.905 38.462 18.05 18.05 44.43 2.24
3576 4389 6.534079 CCACGTAAAAGGAGGTGACTTATAAG 59.466 42.308 11.05 11.05 44.43 1.73
3577 4390 6.400568 CCACGTAAAAGGAGGTGACTTATAA 58.599 40.000 0.00 0.00 44.43 0.98
3578 4391 5.105228 CCCACGTAAAAGGAGGTGACTTATA 60.105 44.000 0.00 0.00 44.43 0.98
3579 4392 4.323257 CCCACGTAAAAGGAGGTGACTTAT 60.323 45.833 0.00 0.00 44.43 1.73
3580 4393 3.007182 CCCACGTAAAAGGAGGTGACTTA 59.993 47.826 0.00 0.00 44.43 2.24
3581 4394 2.224450 CCCACGTAAAAGGAGGTGACTT 60.224 50.000 0.00 0.00 44.43 3.01
3583 4396 1.071228 ACCCACGTAAAAGGAGGTGAC 59.929 52.381 0.00 0.00 37.39 3.67
3584 4397 1.426751 ACCCACGTAAAAGGAGGTGA 58.573 50.000 0.00 0.00 37.39 4.02
3585 4398 2.148768 GAACCCACGTAAAAGGAGGTG 58.851 52.381 0.00 0.00 35.46 4.00
3586 4399 1.072806 GGAACCCACGTAAAAGGAGGT 59.927 52.381 0.00 0.00 0.00 3.85
3587 4400 1.072648 TGGAACCCACGTAAAAGGAGG 59.927 52.381 0.00 0.00 0.00 4.30
3588 4401 2.554370 TGGAACCCACGTAAAAGGAG 57.446 50.000 0.00 0.00 0.00 3.69
3589 4402 2.372504 TGATGGAACCCACGTAAAAGGA 59.627 45.455 0.00 0.00 35.80 3.36
3590 4403 2.486592 GTGATGGAACCCACGTAAAAGG 59.513 50.000 0.00 0.00 35.80 3.11
3591 4404 2.486592 GGTGATGGAACCCACGTAAAAG 59.513 50.000 0.00 0.00 35.80 2.27
3592 4405 2.106857 AGGTGATGGAACCCACGTAAAA 59.893 45.455 0.00 0.00 41.54 1.52
3593 4406 1.700739 AGGTGATGGAACCCACGTAAA 59.299 47.619 0.00 0.00 41.54 2.01
3594 4407 1.002659 CAGGTGATGGAACCCACGTAA 59.997 52.381 0.00 0.00 41.54 3.18
3595 4408 0.611200 CAGGTGATGGAACCCACGTA 59.389 55.000 0.00 0.00 41.54 3.57
3596 4409 1.374947 CAGGTGATGGAACCCACGT 59.625 57.895 0.00 0.00 41.54 4.49
3597 4410 2.040544 GCAGGTGATGGAACCCACG 61.041 63.158 0.00 0.00 41.54 4.94
3598 4411 0.323725 ATGCAGGTGATGGAACCCAC 60.324 55.000 0.00 0.00 41.54 4.61
3599 4412 0.323633 CATGCAGGTGATGGAACCCA 60.324 55.000 0.00 0.00 41.54 4.51
3600 4413 0.034186 TCATGCAGGTGATGGAACCC 60.034 55.000 0.00 0.00 41.54 4.11
3601 4414 2.062971 ATCATGCAGGTGATGGAACC 57.937 50.000 1.96 0.00 37.44 3.62
3607 4420 3.383505 CCAATCAACATCATGCAGGTGAT 59.616 43.478 10.76 10.76 39.34 3.06
3608 4421 2.756207 CCAATCAACATCATGCAGGTGA 59.244 45.455 7.30 7.30 0.00 4.02
3609 4422 2.494471 ACCAATCAACATCATGCAGGTG 59.506 45.455 0.00 0.00 0.00 4.00
3610 4423 2.811410 ACCAATCAACATCATGCAGGT 58.189 42.857 0.00 0.00 0.00 4.00
3611 4424 4.581409 TCATACCAATCAACATCATGCAGG 59.419 41.667 0.00 0.00 0.00 4.85
3612 4425 5.761165 TCATACCAATCAACATCATGCAG 57.239 39.130 0.00 0.00 0.00 4.41
3613 4426 6.527057 TTTCATACCAATCAACATCATGCA 57.473 33.333 0.00 0.00 0.00 3.96
3614 4427 7.259882 TCTTTTCATACCAATCAACATCATGC 58.740 34.615 0.00 0.00 0.00 4.06
3615 4428 9.244799 CATCTTTTCATACCAATCAACATCATG 57.755 33.333 0.00 0.00 0.00 3.07
3616 4429 8.974238 ACATCTTTTCATACCAATCAACATCAT 58.026 29.630 0.00 0.00 0.00 2.45
3617 4430 8.245491 CACATCTTTTCATACCAATCAACATCA 58.755 33.333 0.00 0.00 0.00 3.07
3618 4431 8.461222 TCACATCTTTTCATACCAATCAACATC 58.539 33.333 0.00 0.00 0.00 3.06
3619 4432 8.352137 TCACATCTTTTCATACCAATCAACAT 57.648 30.769 0.00 0.00 0.00 2.71
3620 4433 7.757941 TCACATCTTTTCATACCAATCAACA 57.242 32.000 0.00 0.00 0.00 3.33
3621 4434 9.474920 TTTTCACATCTTTTCATACCAATCAAC 57.525 29.630 0.00 0.00 0.00 3.18
3622 4435 9.695526 CTTTTCACATCTTTTCATACCAATCAA 57.304 29.630 0.00 0.00 0.00 2.57
3623 4436 8.306038 CCTTTTCACATCTTTTCATACCAATCA 58.694 33.333 0.00 0.00 0.00 2.57
3624 4437 8.306761 ACCTTTTCACATCTTTTCATACCAATC 58.693 33.333 0.00 0.00 0.00 2.67
3625 4438 8.090214 CACCTTTTCACATCTTTTCATACCAAT 58.910 33.333 0.00 0.00 0.00 3.16
3626 4439 7.286546 TCACCTTTTCACATCTTTTCATACCAA 59.713 33.333 0.00 0.00 0.00 3.67
3627 4440 6.775142 TCACCTTTTCACATCTTTTCATACCA 59.225 34.615 0.00 0.00 0.00 3.25
3628 4441 7.040409 AGTCACCTTTTCACATCTTTTCATACC 60.040 37.037 0.00 0.00 0.00 2.73
3629 4442 7.875971 AGTCACCTTTTCACATCTTTTCATAC 58.124 34.615 0.00 0.00 0.00 2.39
3630 4443 8.463930 AAGTCACCTTTTCACATCTTTTCATA 57.536 30.769 0.00 0.00 0.00 2.15
3631 4444 6.966534 AGTCACCTTTTCACATCTTTTCAT 57.033 33.333 0.00 0.00 0.00 2.57
3632 4445 6.773976 AAGTCACCTTTTCACATCTTTTCA 57.226 33.333 0.00 0.00 0.00 2.69
3635 4448 9.574516 ACTTATAAGTCACCTTTTCACATCTTT 57.425 29.630 12.50 0.00 32.86 2.52
3660 4473 9.827411 GATTTTACTGATTTTAAGTCACCTGAC 57.173 33.333 0.00 0.00 45.08 3.51
3661 4474 9.567776 TGATTTTACTGATTTTAAGTCACCTGA 57.432 29.630 0.00 0.00 0.00 3.86
3662 4475 9.831737 CTGATTTTACTGATTTTAAGTCACCTG 57.168 33.333 0.00 0.00 0.00 4.00
3663 4476 9.014297 CCTGATTTTACTGATTTTAAGTCACCT 57.986 33.333 0.00 0.00 0.00 4.00
3664 4477 8.793592 ACCTGATTTTACTGATTTTAAGTCACC 58.206 33.333 0.00 0.00 0.00 4.02
3665 4478 9.612620 CACCTGATTTTACTGATTTTAAGTCAC 57.387 33.333 0.00 0.00 0.00 3.67
3666 4479 9.567776 TCACCTGATTTTACTGATTTTAAGTCA 57.432 29.630 0.00 0.00 0.00 3.41
3683 4496 8.458843 CGTTTGGTTCTAATAAATCACCTGATT 58.541 33.333 0.00 0.00 45.91 2.57
3684 4497 7.067008 CCGTTTGGTTCTAATAAATCACCTGAT 59.933 37.037 0.00 0.00 36.07 2.90
3685 4498 6.373216 CCGTTTGGTTCTAATAAATCACCTGA 59.627 38.462 0.00 0.00 0.00 3.86
3686 4499 6.551736 CCGTTTGGTTCTAATAAATCACCTG 58.448 40.000 0.00 0.00 0.00 4.00
3687 4500 6.753107 CCGTTTGGTTCTAATAAATCACCT 57.247 37.500 0.00 0.00 0.00 4.00
3703 4516 3.891324 TGAAAATTTAGCGACCGTTTGG 58.109 40.909 0.00 0.00 42.84 3.28
3704 4517 4.323336 CCATGAAAATTTAGCGACCGTTTG 59.677 41.667 0.00 0.00 0.00 2.93
3705 4518 4.481463 CCATGAAAATTTAGCGACCGTTT 58.519 39.130 0.00 0.00 0.00 3.60
3706 4519 3.672241 GCCATGAAAATTTAGCGACCGTT 60.672 43.478 0.00 0.00 0.00 4.44
3707 4520 2.159435 GCCATGAAAATTTAGCGACCGT 60.159 45.455 0.00 0.00 0.00 4.83
3708 4521 2.450160 GCCATGAAAATTTAGCGACCG 58.550 47.619 0.00 0.00 0.00 4.79
3709 4522 2.794631 CGGCCATGAAAATTTAGCGACC 60.795 50.000 2.24 0.00 0.00 4.79
3710 4523 2.450160 CGGCCATGAAAATTTAGCGAC 58.550 47.619 2.24 0.00 0.00 5.19
3711 4524 1.403679 CCGGCCATGAAAATTTAGCGA 59.596 47.619 2.24 0.00 0.00 4.93
3712 4525 1.838913 CCGGCCATGAAAATTTAGCG 58.161 50.000 2.24 0.00 0.00 4.26
3713 4526 1.570813 GCCGGCCATGAAAATTTAGC 58.429 50.000 18.11 0.00 0.00 3.09
3714 4527 1.480137 TGGCCGGCCATGAAAATTTAG 59.520 47.619 44.23 0.00 41.89 1.85
3715 4528 1.480137 CTGGCCGGCCATGAAAATTTA 59.520 47.619 46.65 21.47 46.15 1.40
3716 4529 0.249955 CTGGCCGGCCATGAAAATTT 59.750 50.000 46.65 0.00 46.15 1.82
3717 4530 0.904394 ACTGGCCGGCCATGAAAATT 60.904 50.000 46.65 22.10 46.15 1.82
3718 4531 0.904394 AACTGGCCGGCCATGAAAAT 60.904 50.000 46.65 25.63 46.15 1.82
3890 4712 1.407936 AGTCACCAGCTATCTCGCAT 58.592 50.000 0.00 0.00 0.00 4.73
3977 4838 9.597170 AAGCACATGAGACATATGATATGATAC 57.403 33.333 18.62 9.42 0.00 2.24
3996 4862 0.880278 ACTCGTGAACGCAAGCACAT 60.880 50.000 0.00 0.00 45.62 3.21
4043 4909 0.723414 GTACGTCGATCTCCGTCACA 59.277 55.000 9.42 0.00 38.43 3.58
4045 4911 0.458370 TCGTACGTCGATCTCCGTCA 60.458 55.000 16.05 0.00 44.01 4.35
4060 4926 6.565435 CGTCAAAACTGAGTCTACTTCTCGTA 60.565 42.308 0.00 0.00 34.99 3.43
4061 4927 5.521544 GTCAAAACTGAGTCTACTTCTCGT 58.478 41.667 0.00 0.00 34.99 4.18
4090 4961 0.810648 TTGAATCATTGGGCTGACGC 59.189 50.000 0.00 0.00 0.00 5.19
4102 4973 5.866633 GTCCATGGCGTTTTTAATTGAATCA 59.133 36.000 6.96 0.00 0.00 2.57
4468 5393 1.760086 CGGTGAGGAGGATGGAGCT 60.760 63.158 0.00 0.00 0.00 4.09
4761 5707 1.211457 GTGCTCATGGTCTTCATCCCT 59.789 52.381 0.00 0.00 32.92 4.20
4863 5815 4.680237 CAGCCGTCGTTGCTCCCA 62.680 66.667 0.00 0.00 36.81 4.37
5147 6105 9.829507 CTTTTTGCATATTAATAATTGGTGGGA 57.170 29.630 0.00 0.00 0.00 4.37
5197 6162 4.624364 CACCCGACAGTGCTGCCA 62.624 66.667 0.00 0.00 0.00 4.92
5204 6169 5.892119 TCTTCTTAGATTATCACCCGACAGT 59.108 40.000 0.00 0.00 0.00 3.55
5247 6216 3.681897 GGCTATTCGAGTATGCATCCAAG 59.318 47.826 0.19 0.00 0.00 3.61
5258 6227 0.739561 GACCAGACGGCTATTCGAGT 59.260 55.000 0.00 0.00 34.57 4.18
5282 6251 2.826428 CAAAGGCTAGCGCTTAGATGA 58.174 47.619 18.68 0.00 36.09 2.92
5285 6254 0.249120 TGCAAAGGCTAGCGCTTAGA 59.751 50.000 18.68 0.00 41.91 2.10
5288 6257 0.606401 TCTTGCAAAGGCTAGCGCTT 60.606 50.000 18.68 10.42 46.24 4.68
5306 6275 0.166814 CAAGCGCAACAGTAGCCTTC 59.833 55.000 11.47 0.00 0.00 3.46
5314 6283 2.096335 TGCATAGAATCAAGCGCAACAG 59.904 45.455 11.47 0.00 0.00 3.16
5398 6408 7.269477 TGAAACATGTGTGATGTTACAATGA 57.731 32.000 0.00 0.00 40.94 2.57
5424 6434 5.190677 GGTATGTAAACAGGGCTATGTGTT 58.809 41.667 0.00 0.00 38.56 3.32
5436 6448 5.980116 GTGTTGTTGCAATGGTATGTAAACA 59.020 36.000 0.59 0.67 31.57 2.83
5437 6449 5.980116 TGTGTTGTTGCAATGGTATGTAAAC 59.020 36.000 0.59 0.00 0.00 2.01
5438 6450 6.149129 TGTGTTGTTGCAATGGTATGTAAA 57.851 33.333 0.59 0.00 0.00 2.01
5469 6481 2.173782 TGCAACTGGGGTTCTGTTTCTA 59.826 45.455 0.00 0.00 35.72 2.10
5477 6489 0.104120 GGTGTTTGCAACTGGGGTTC 59.896 55.000 0.00 0.00 32.73 3.62
5479 6491 0.616111 TTGGTGTTTGCAACTGGGGT 60.616 50.000 0.00 0.00 32.44 4.95
5484 6496 2.114616 TGGGATTTGGTGTTTGCAACT 58.885 42.857 0.00 0.00 32.44 3.16
5509 6523 5.748402 ACTGCAATGATTCTGACTGGAATA 58.252 37.500 0.00 0.00 36.24 1.75
5513 6527 3.126514 GTGACTGCAATGATTCTGACTGG 59.873 47.826 0.00 0.00 0.00 4.00
5515 6529 4.011966 TGTGACTGCAATGATTCTGACT 57.988 40.909 0.00 0.00 0.00 3.41
5520 6534 2.094545 GGGGTTGTGACTGCAATGATTC 60.095 50.000 0.00 0.00 0.00 2.52
5559 6702 1.956170 GAGTCTGCACGGTGGTGTG 60.956 63.158 10.60 0.00 46.13 3.82
5613 6756 3.139850 TGCACCAAAAATTTCTGCCATG 58.860 40.909 0.00 0.00 0.00 3.66
5645 6789 2.609459 CGACCAACACTATCATTGAGGC 59.391 50.000 0.00 0.00 0.00 4.70
5650 6794 5.937540 TGAAACATCGACCAACACTATCATT 59.062 36.000 0.00 0.00 0.00 2.57
5652 6796 4.888917 TGAAACATCGACCAACACTATCA 58.111 39.130 0.00 0.00 0.00 2.15
5677 6822 0.674581 TCATTGACCAAGCAGGCGAG 60.675 55.000 0.00 0.00 43.14 5.03
5680 6825 1.318158 CCCTCATTGACCAAGCAGGC 61.318 60.000 0.00 0.00 43.14 4.85
5710 6855 4.636435 CCACCACGGGACACCACC 62.636 72.222 0.00 0.00 36.13 4.61
5711 6856 3.868985 ACCACCACGGGACACCAC 61.869 66.667 0.00 0.00 40.22 4.16
5712 6857 3.867783 CACCACCACGGGACACCA 61.868 66.667 0.00 0.00 40.22 4.17
5713 6858 3.819877 GACACCACCACGGGACACC 62.820 68.421 0.00 0.00 40.22 4.16
5714 6859 1.466025 TAGACACCACCACGGGACAC 61.466 60.000 0.00 0.00 40.22 3.67
5715 6860 1.152504 TAGACACCACCACGGGACA 60.153 57.895 0.00 0.00 40.22 4.02
5716 6861 1.183676 AGTAGACACCACCACGGGAC 61.184 60.000 0.00 0.00 40.22 4.46
5717 6862 1.154454 AGTAGACACCACCACGGGA 59.846 57.895 0.00 0.00 40.22 5.14
5718 6863 1.183030 TCAGTAGACACCACCACGGG 61.183 60.000 0.00 0.00 40.22 5.28
5719 6864 0.038526 GTCAGTAGACACCACCACGG 60.039 60.000 0.00 0.00 44.34 4.94
5720 6865 3.491581 GTCAGTAGACACCACCACG 57.508 57.895 0.00 0.00 44.34 4.94
5734 6879 1.503542 GCCGCAAGTTGGATGTCAG 59.496 57.895 4.75 0.00 0.00 3.51
5756 6901 2.692041 CAATTTCTTCTCATCCCAGCCC 59.308 50.000 0.00 0.00 0.00 5.19
5821 7802 1.074072 AAATGCGGCTACCCACACA 59.926 52.632 0.00 0.00 0.00 3.72
5856 7837 0.107214 CCCACCCAACGCTATCACAT 60.107 55.000 0.00 0.00 0.00 3.21
5860 7841 2.516225 GGCCCACCCAACGCTATC 60.516 66.667 0.00 0.00 0.00 2.08
5891 7874 0.322816 ACTGGCTTCGGTTGCATGAT 60.323 50.000 0.00 0.00 0.00 2.45
5901 7884 1.202268 CCCGACTAGTAACTGGCTTCG 60.202 57.143 0.00 0.00 0.00 3.79
5904 7887 1.183549 CACCCGACTAGTAACTGGCT 58.816 55.000 0.00 0.00 0.00 4.75
5907 7890 2.683867 CTCCTCACCCGACTAGTAACTG 59.316 54.545 0.00 0.00 0.00 3.16
5909 7892 2.996631 TCTCCTCACCCGACTAGTAAC 58.003 52.381 0.00 0.00 0.00 2.50
5910 7893 3.618351 CTTCTCCTCACCCGACTAGTAA 58.382 50.000 0.00 0.00 0.00 2.24
5911 7894 2.683152 GCTTCTCCTCACCCGACTAGTA 60.683 54.545 0.00 0.00 0.00 1.82
5914 7897 0.039180 TGCTTCTCCTCACCCGACTA 59.961 55.000 0.00 0.00 0.00 2.59
5963 7959 3.754965 TGAAGTTTACATGCTTCCAGCT 58.245 40.909 7.93 0.00 42.97 4.24
5966 7962 5.359576 ACAGTTTGAAGTTTACATGCTTCCA 59.640 36.000 7.93 0.00 40.07 3.53
5967 7963 5.831997 ACAGTTTGAAGTTTACATGCTTCC 58.168 37.500 7.93 0.00 40.07 3.46
5968 7964 6.729187 AGACAGTTTGAAGTTTACATGCTTC 58.271 36.000 0.00 0.00 40.90 3.86
5969 7965 6.699575 AGACAGTTTGAAGTTTACATGCTT 57.300 33.333 0.00 0.00 0.00 3.91
5970 7966 6.204882 GGTAGACAGTTTGAAGTTTACATGCT 59.795 38.462 0.00 0.00 29.68 3.79
5971 7967 6.371389 GGTAGACAGTTTGAAGTTTACATGC 58.629 40.000 0.00 0.00 29.68 4.06
5972 7968 6.202188 ACGGTAGACAGTTTGAAGTTTACATG 59.798 38.462 0.00 0.00 29.68 3.21
5973 7969 6.202188 CACGGTAGACAGTTTGAAGTTTACAT 59.798 38.462 0.00 0.00 29.68 2.29
5976 7972 5.521010 CACACGGTAGACAGTTTGAAGTTTA 59.479 40.000 0.00 0.00 0.00 2.01
5982 7978 3.530265 AACACACGGTAGACAGTTTGA 57.470 42.857 6.17 0.00 0.00 2.69
5984 7980 4.757594 TGTTAACACACGGTAGACAGTTT 58.242 39.130 3.59 0.00 0.00 2.66
6042 8038 1.154672 GTATGTGTGTGTGTGCGCG 60.155 57.895 0.00 0.00 0.00 6.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.