Multiple sequence alignment - TraesCS1B01G224800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G224800 chr1B 100.000 7902 0 0 1 7902 403411136 403419037 0.000000e+00 14593.0
1 TraesCS1B01G224800 chr1B 94.044 319 17 2 7586 7902 288557093 288556775 4.290000e-132 483.0
2 TraesCS1B01G224800 chr1B 88.994 318 35 0 7585 7902 319901001 319900684 2.070000e-105 394.0
3 TraesCS1B01G224800 chr1A 94.140 3481 146 27 1439 4887 373314131 373317585 0.000000e+00 5245.0
4 TraesCS1B01G224800 chr1A 94.059 2525 104 17 4885 7367 373317666 373320186 0.000000e+00 3790.0
5 TraesCS1B01G224800 chr1A 88.108 1337 54 35 161 1430 373312768 373314066 0.000000e+00 1491.0
6 TraesCS1B01G224800 chr1A 87.697 317 39 0 7586 7902 37490520 37490204 3.480000e-98 370.0
7 TraesCS1B01G224800 chr1A 90.789 152 10 3 7430 7581 373320395 373320542 4.840000e-47 200.0
8 TraesCS1B01G224800 chr1A 91.935 62 1 2 116 177 373312670 373312727 5.080000e-12 84.2
9 TraesCS1B01G224800 chr1D 94.812 2506 93 20 4885 7369 299268546 299271035 0.000000e+00 3873.0
10 TraesCS1B01G224800 chr1D 94.444 1656 62 9 3247 4887 299266782 299268422 0.000000e+00 2521.0
11 TraesCS1B01G224800 chr1D 94.084 1589 60 16 1439 3002 299264954 299266533 0.000000e+00 2383.0
12 TraesCS1B01G224800 chr1D 93.878 1323 50 12 120 1430 299263586 299264889 0.000000e+00 1965.0
13 TraesCS1B01G224800 chr1D 88.382 241 16 8 2994 3230 299266566 299266798 6.040000e-71 279.0
14 TraesCS1B01G224800 chr1D 84.043 188 18 3 7403 7581 299271145 299271329 3.790000e-38 171.0
15 TraesCS1B01G224800 chr5B 94.025 318 18 1 7586 7902 526730261 526729944 1.540000e-131 481.0
16 TraesCS1B01G224800 chr3B 90.476 315 30 0 7588 7902 676607483 676607797 4.410000e-112 416.0
17 TraesCS1B01G224800 chr3B 88.994 318 33 2 7586 7902 562443676 562443360 7.430000e-105 392.0
18 TraesCS1B01G224800 chr4A 88.924 316 35 0 7587 7902 513094736 513095051 2.670000e-104 390.0
19 TraesCS1B01G224800 chr7D 87.013 308 40 0 7585 7892 70131793 70132100 1.630000e-91 348.0
20 TraesCS1B01G224800 chr2B 85.174 317 45 2 7587 7902 800731243 800730928 2.750000e-84 324.0
21 TraesCS1B01G224800 chr6D 96.970 33 1 0 3666 3698 22994498 22994466 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G224800 chr1B 403411136 403419037 7901 False 14593.000000 14593 100.000000 1 7902 1 chr1B.!!$F1 7901
1 TraesCS1B01G224800 chr1A 373312670 373320542 7872 False 2162.040000 5245 91.806200 116 7581 5 chr1A.!!$F1 7465
2 TraesCS1B01G224800 chr1D 299263586 299271329 7743 False 1865.333333 3873 91.607167 120 7581 6 chr1D.!!$F1 7461

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.109272 GCGGCCTATTCGATCGATCA 60.109 55.000 24.40 5.12 0.00 2.92 F
1342 1466 0.468029 GCCCATCGGGTTCATCCATT 60.468 55.000 0.06 0.00 46.51 3.16 F
2781 2987 1.068474 ACGTACAGATGAAACAGCGC 58.932 50.000 0.00 0.00 0.00 5.92 F
3971 4228 0.035152 AGCTCCATTTGATCACGCCA 60.035 50.000 0.00 0.00 0.00 5.69 F
4050 4307 0.904649 CAGTGGGGCAGTGACTATCA 59.095 55.000 0.00 0.00 36.99 2.15 F
4074 4331 2.850321 CCCGTTCGACATCAACATTTG 58.150 47.619 0.00 0.00 0.00 2.32 F
5718 6114 0.245266 GGGTTGTTTTATGCACCCCG 59.755 55.000 0.00 0.00 28.94 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 1474 0.909623 GGGGGAGGAAATGAGACGAA 59.090 55.0 0.00 0.00 0.00 3.85 R
3142 3391 0.339859 AGGCTGAGATGGTGGTCCTA 59.660 55.0 0.00 0.00 34.23 2.94 R
4050 4307 0.802494 GTTGATGTCGAACGGGCAAT 59.198 50.0 0.00 0.00 0.00 3.56 R
4801 5071 0.097674 CAAAGTGCATGCTACTCGGC 59.902 55.0 20.33 0.59 0.00 5.54 R
4949 5345 0.321564 TCAGACCATTGCCCTGAACG 60.322 55.0 0.00 0.00 34.38 3.95 R
6024 6420 0.955919 CAAAGGGACAGGGCGAAGTC 60.956 60.0 0.00 0.00 0.00 3.01 R
7567 8155 0.035056 AAGCGTTAGATGCTGGCCTT 60.035 50.0 3.32 0.00 40.06 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 7.809546 AGGTAAAGATAAAGATAAAGCTGGC 57.190 36.000 0.00 0.00 0.00 4.85
91 92 7.578203 AGGTAAAGATAAAGATAAAGCTGGCT 58.422 34.615 0.00 0.00 0.00 4.75
92 93 8.055790 AGGTAAAGATAAAGATAAAGCTGGCTT 58.944 33.333 1.60 1.60 37.98 4.35
93 94 9.338622 GGTAAAGATAAAGATAAAGCTGGCTTA 57.661 33.333 8.30 0.00 34.84 3.09
97 98 8.628630 AGATAAAGATAAAGCTGGCTTAATCC 57.371 34.615 8.30 0.00 34.84 3.01
98 99 8.443979 AGATAAAGATAAAGCTGGCTTAATCCT 58.556 33.333 8.30 1.85 34.84 3.24
99 100 9.726438 GATAAAGATAAAGCTGGCTTAATCCTA 57.274 33.333 8.30 0.00 34.84 2.94
101 102 8.823220 AAAGATAAAGCTGGCTTAATCCTAAA 57.177 30.769 8.30 0.00 34.84 1.85
102 103 8.823220 AAGATAAAGCTGGCTTAATCCTAAAA 57.177 30.769 8.30 0.00 34.84 1.52
103 104 8.823220 AGATAAAGCTGGCTTAATCCTAAAAA 57.177 30.769 8.30 0.00 34.84 1.94
149 150 0.109272 GCGGCCTATTCGATCGATCA 60.109 55.000 24.40 5.12 0.00 2.92
240 294 2.260154 TGCGGTTGCCATGTCTGTG 61.260 57.895 0.00 0.00 41.78 3.66
262 316 0.909610 TCCACCAGGTTGGAGCTAGG 60.910 60.000 1.40 0.00 41.00 3.02
354 433 1.712018 CGCTGGTCCGTCATCGTAGA 61.712 60.000 0.00 0.00 45.75 2.59
401 480 1.338769 CCAAGGAAGGTTCGACCGATT 60.339 52.381 0.00 0.00 44.90 3.34
433 516 2.939103 GCAAAGCATGGACCACTACTAG 59.061 50.000 0.00 0.00 0.00 2.57
434 517 3.619979 GCAAAGCATGGACCACTACTAGT 60.620 47.826 0.00 0.00 0.00 2.57
435 518 4.382685 GCAAAGCATGGACCACTACTAGTA 60.383 45.833 0.00 1.89 0.00 1.82
436 519 5.352284 CAAAGCATGGACCACTACTAGTAG 58.648 45.833 25.30 25.30 39.04 2.57
437 520 3.567397 AGCATGGACCACTACTAGTAGG 58.433 50.000 29.05 18.20 37.49 3.18
438 521 3.052793 AGCATGGACCACTACTAGTAGGT 60.053 47.826 29.05 20.99 37.49 3.08
439 522 3.705072 GCATGGACCACTACTAGTAGGTT 59.295 47.826 29.05 15.34 37.49 3.50
440 523 4.891756 GCATGGACCACTACTAGTAGGTTA 59.108 45.833 29.05 15.03 37.49 2.85
441 524 5.009811 GCATGGACCACTACTAGTAGGTTAG 59.990 48.000 29.05 17.98 37.49 2.34
442 525 4.530875 TGGACCACTACTAGTAGGTTAGC 58.469 47.826 29.05 15.89 37.49 3.09
443 526 4.229123 TGGACCACTACTAGTAGGTTAGCT 59.771 45.833 29.05 8.50 37.49 3.32
444 527 5.429762 TGGACCACTACTAGTAGGTTAGCTA 59.570 44.000 29.05 12.53 37.49 3.32
485 569 5.102953 TGTAGCTGAGTTGCCAAAGATAT 57.897 39.130 0.00 0.00 0.00 1.63
491 575 6.049149 GCTGAGTTGCCAAAGATATACAGTA 58.951 40.000 0.00 0.00 0.00 2.74
539 623 2.222886 CGATGGAGAAAGCACATTGACG 60.223 50.000 0.00 0.00 0.00 4.35
551 635 5.183969 AGCACATTGACGTCTAGAGTACTA 58.816 41.667 17.92 0.00 0.00 1.82
647 739 2.740714 GGCACGAACACGATGCTCC 61.741 63.158 0.00 0.00 35.84 4.70
648 740 3.071459 GCACGAACACGATGCTCCG 62.071 63.158 0.00 0.00 34.24 4.63
649 741 2.126071 ACGAACACGATGCTCCGG 60.126 61.111 0.00 0.00 0.00 5.14
650 742 2.126071 CGAACACGATGCTCCGGT 60.126 61.111 0.00 0.00 0.00 5.28
653 745 2.537792 GAACACGATGCTCCGGTCGA 62.538 60.000 17.93 0.00 40.11 4.20
654 746 2.579787 CACGATGCTCCGGTCGAC 60.580 66.667 17.93 7.13 40.11 4.20
656 748 3.518998 CGATGCTCCGGTCGACCT 61.519 66.667 30.92 12.42 40.11 3.85
831 938 1.411501 GCATCAGAGTCTCCTCCCTCT 60.412 57.143 0.00 0.00 38.58 3.69
955 1070 0.523966 CGGAGCGGCCAATAAACAAA 59.476 50.000 2.24 0.00 35.94 2.83
956 1071 1.731098 CGGAGCGGCCAATAAACAAAC 60.731 52.381 2.24 0.00 35.94 2.93
1342 1466 0.468029 GCCCATCGGGTTCATCCATT 60.468 55.000 0.06 0.00 46.51 3.16
1344 1468 1.682854 CCCATCGGGTTCATCCATTTG 59.317 52.381 0.00 0.00 38.25 2.32
1350 1474 2.825532 CGGGTTCATCCATTTGAAGGTT 59.174 45.455 0.00 0.00 36.34 3.50
1430 1554 6.183361 TGCTTACATAGATAGCTTCCACACAT 60.183 38.462 0.00 0.00 35.93 3.21
1431 1555 6.708054 GCTTACATAGATAGCTTCCACACATT 59.292 38.462 0.00 0.00 32.26 2.71
1434 1558 6.653020 ACATAGATAGCTTCCACACATTTCA 58.347 36.000 0.00 0.00 0.00 2.69
1435 1559 7.112122 ACATAGATAGCTTCCACACATTTCAA 58.888 34.615 0.00 0.00 0.00 2.69
1437 1617 5.564550 AGATAGCTTCCACACATTTCAACT 58.435 37.500 0.00 0.00 0.00 3.16
1456 1636 6.148948 TCAACTGGCGATTCAACTATTTTTG 58.851 36.000 0.00 0.00 0.00 2.44
1690 1880 1.845143 AGAGAGATGCCTTGCTTGGAT 59.155 47.619 0.00 0.00 0.00 3.41
1748 1938 2.440539 ACTAGTGCGGAGTGTGAAAG 57.559 50.000 0.00 0.00 0.00 2.62
1779 1969 1.753078 ATCGGCGTGCTACAGAGGA 60.753 57.895 6.85 0.00 0.00 3.71
1958 2157 2.589540 CTGATGGGTTGGCGCCTA 59.410 61.111 29.70 19.10 0.00 3.93
1972 2171 1.343506 CGCCTAGGTTTGTGTCGTAC 58.656 55.000 11.31 0.00 0.00 3.67
1997 2196 1.202758 TGGATGTCCGTGAGTTTGCTT 60.203 47.619 0.00 0.00 39.43 3.91
2043 2245 5.116084 TCTGTCCATCTCCATTTAAAGGG 57.884 43.478 12.75 12.75 0.00 3.95
2130 2333 6.315642 GTCCTTTATGTTAGCCTGTCCTTTAC 59.684 42.308 0.00 0.00 0.00 2.01
2204 2409 2.254152 TACAGTGCTGGGAGGATTCT 57.746 50.000 4.11 0.00 34.19 2.40
2327 2532 5.063180 TGTTGTCGTTGGTCTATACGAAT 57.937 39.130 0.00 0.00 46.87 3.34
2461 2667 9.691362 TCTGGTTGCTAATTTTTGTAATTCTTC 57.309 29.630 0.00 0.00 0.00 2.87
2526 2732 7.867909 TCAGATGACAAACGGTTCTATATCATC 59.132 37.037 16.67 16.67 40.87 2.92
2745 2951 3.434641 ACTGTGAGCAGATTGTTCATTCG 59.565 43.478 1.30 0.00 45.28 3.34
2775 2981 6.262193 TCACAGTATCACGTACAGATGAAA 57.738 37.500 7.80 0.00 35.67 2.69
2781 2987 1.068474 ACGTACAGATGAAACAGCGC 58.932 50.000 0.00 0.00 0.00 5.92
2820 3026 1.179152 TTATCGGCAGTCTTCCACGA 58.821 50.000 0.00 0.00 38.00 4.35
2860 3066 3.263425 TCTTGGAACCCTGTGATTAGACC 59.737 47.826 0.00 0.00 0.00 3.85
2916 3122 6.801575 TCTTTTTCTTCAAGCAAATAACGGT 58.198 32.000 0.00 0.00 0.00 4.83
2954 3160 6.013725 TGGTCATACTCACCAACTTTAGTGAT 60.014 38.462 0.00 0.00 41.17 3.06
2960 3166 6.533730 ACTCACCAACTTTAGTGATGAATGA 58.466 36.000 0.00 0.00 41.90 2.57
2979 3185 3.196463 TGAACGTTAAGAACTTGCGGAA 58.804 40.909 0.00 0.00 0.00 4.30
3046 3295 7.099120 GTGCCAAAAGATGACTGGATATTTTT 58.901 34.615 0.00 0.00 31.38 1.94
3101 3350 6.763610 GCAGTCAACCTTTATCAGTAGCTAAT 59.236 38.462 0.00 0.00 0.00 1.73
3129 3378 4.156739 GCACTTGCTAGCAATATTATCCCC 59.843 45.833 29.40 7.89 38.21 4.81
3141 3390 2.891191 TTATCCCCACTTTGGTGTCC 57.109 50.000 0.00 0.00 41.53 4.02
3142 3391 2.053747 TATCCCCACTTTGGTGTCCT 57.946 50.000 0.00 0.00 41.53 3.85
3162 3413 0.980231 AGGACCACCATCTCAGCCTC 60.980 60.000 0.00 0.00 38.94 4.70
3172 3423 2.322355 TCTCAGCCTCTTGCAATAGC 57.678 50.000 0.00 3.27 44.83 2.97
3260 3511 5.505181 TGAGCAAAGAGACCCTTTTAGAT 57.495 39.130 0.00 0.00 42.13 1.98
3318 3569 2.965147 AGGAAACCCAATTGTGGTTCAG 59.035 45.455 23.34 1.23 45.23 3.02
3339 3590 3.776969 AGACATTTCCTCATAGGCACTGA 59.223 43.478 0.00 0.00 41.52 3.41
3344 3595 3.616956 TCCTCATAGGCACTGAAGTTG 57.383 47.619 0.00 0.00 41.52 3.16
3386 3637 9.147732 AGGAAGGTGAGTTTTATTTTCTTCAAT 57.852 29.630 0.00 0.00 33.24 2.57
3429 3683 5.535753 AAAAAGATTGTTTGGAGTCTGGG 57.464 39.130 0.00 0.00 0.00 4.45
3512 3766 5.858381 TCTGCTGACTTATTGTGTTCTCTT 58.142 37.500 0.00 0.00 0.00 2.85
3547 3801 3.935203 CAGAAGATGCAACTATTCGTGGT 59.065 43.478 0.00 0.00 0.00 4.16
3609 3863 5.351740 GCTCTGGAAAATGTAGTGGTACTTC 59.648 44.000 0.00 0.00 0.00 3.01
3653 3907 8.035984 GGTTTTCTCTAACAGTTATGACTAGCT 58.964 37.037 0.00 0.00 33.90 3.32
3815 4071 5.287035 GCTAATTCGCATTTTTCTTGGACTG 59.713 40.000 0.00 0.00 0.00 3.51
3816 4072 2.704725 TCGCATTTTTCTTGGACTGC 57.295 45.000 0.00 0.00 0.00 4.40
3817 4073 2.229792 TCGCATTTTTCTTGGACTGCT 58.770 42.857 0.00 0.00 0.00 4.24
3818 4074 2.030893 TCGCATTTTTCTTGGACTGCTG 60.031 45.455 0.00 0.00 0.00 4.41
3819 4075 2.030893 CGCATTTTTCTTGGACTGCTGA 60.031 45.455 0.00 0.00 0.00 4.26
3820 4076 3.550639 CGCATTTTTCTTGGACTGCTGAA 60.551 43.478 0.00 0.00 0.00 3.02
3821 4077 4.563061 GCATTTTTCTTGGACTGCTGAAT 58.437 39.130 0.00 0.00 0.00 2.57
3822 4078 4.992951 GCATTTTTCTTGGACTGCTGAATT 59.007 37.500 0.00 0.00 0.00 2.17
3882 4139 5.426689 TCATTTCTCTAAGCACCTGTGAT 57.573 39.130 0.51 0.00 0.00 3.06
3895 4152 4.293415 CACCTGTGATTTTTCTTGCACTC 58.707 43.478 0.00 0.00 32.69 3.51
3896 4153 4.037208 CACCTGTGATTTTTCTTGCACTCT 59.963 41.667 0.00 0.00 32.69 3.24
3935 4192 1.067295 ATGGCTGGTGTTTCTGGAGA 58.933 50.000 0.00 0.00 0.00 3.71
3970 4227 1.953559 TAGCTCCATTTGATCACGCC 58.046 50.000 0.00 0.00 0.00 5.68
3971 4228 0.035152 AGCTCCATTTGATCACGCCA 60.035 50.000 0.00 0.00 0.00 5.69
3974 4231 2.358957 CTCCATTTGATCACGCCAAGA 58.641 47.619 0.00 0.00 0.00 3.02
4034 4291 4.217118 ACGTAGTTGAGAACGATTACCAGT 59.783 41.667 1.45 0.00 37.78 4.00
4050 4307 0.904649 CAGTGGGGCAGTGACTATCA 59.095 55.000 0.00 0.00 36.99 2.15
4074 4331 2.850321 CCCGTTCGACATCAACATTTG 58.150 47.619 0.00 0.00 0.00 2.32
4095 4352 7.452880 TTTGAAGACCATGGTAGAAATTCAG 57.547 36.000 19.80 0.00 0.00 3.02
4102 4359 5.103940 ACCATGGTAGAAATTCAGGCATAGT 60.104 40.000 18.10 0.00 0.00 2.12
4213 4470 3.817647 ACTGCAAACACTTCTTCCATCTC 59.182 43.478 0.00 0.00 0.00 2.75
4307 4564 7.882791 TGAAGATGCTGGTAAACAAGAAATAGA 59.117 33.333 0.00 0.00 0.00 1.98
4465 4722 4.269183 TGCCGACAAGACCAATGAATATT 58.731 39.130 0.00 0.00 0.00 1.28
4512 4769 3.476552 CAAGTTGCCTGAACCAGTAGAA 58.523 45.455 0.00 0.00 34.80 2.10
4718 4987 5.067023 CCTGCTTTCTTCTGATCCAAATACC 59.933 44.000 0.00 0.00 0.00 2.73
4719 4988 5.569355 TGCTTTCTTCTGATCCAAATACCA 58.431 37.500 0.00 0.00 0.00 3.25
4949 5345 9.490663 GTTGATAGTAATGTCTTTTGCACATAC 57.509 33.333 0.00 0.00 33.12 2.39
4997 5393 2.029110 TCTTTATGTTGCTGCCTTTGCC 60.029 45.455 0.00 0.00 36.33 4.52
5137 5533 7.321153 GTTAGTCTGGTATACAACACATCTGT 58.679 38.462 5.01 0.00 0.00 3.41
5272 5668 7.384477 AGTGACATACATGGATATGATGACAG 58.616 38.462 9.63 0.00 37.73 3.51
5298 5694 6.401367 GCCTATTAAGAGTTTCGTTGCGTTTA 60.401 38.462 0.00 0.00 0.00 2.01
5390 5786 1.259142 TGGCATGCCATTGTGAAGGG 61.259 55.000 35.59 0.00 41.89 3.95
5421 5817 3.967332 AATTTTGGGGAGACAGCAATG 57.033 42.857 0.00 0.00 0.00 2.82
5454 5850 1.275291 TCTGGGGTCAGTCGATTCAAC 59.725 52.381 0.00 0.00 41.59 3.18
5539 5935 2.154462 ACAGATTCTTCACCAAAGGCG 58.846 47.619 0.00 0.00 35.54 5.52
5551 5947 3.627577 CACCAAAGGCGCTCATACTATTT 59.372 43.478 7.64 0.00 0.00 1.40
5555 5951 5.527582 CCAAAGGCGCTCATACTATTTTAGT 59.472 40.000 7.64 0.00 42.68 2.24
5557 5953 6.604735 AAGGCGCTCATACTATTTTAGTTG 57.395 37.500 7.64 0.00 40.14 3.16
5593 5989 8.522830 ACCATTCTCGAAATAATGTTTTGATGT 58.477 29.630 11.62 1.81 32.34 3.06
5607 6003 0.897401 TGATGTTTGCCGATTGCCCA 60.897 50.000 0.00 0.00 40.16 5.36
5611 6007 1.983481 TTTGCCGATTGCCCATGCT 60.983 52.632 0.00 0.00 40.16 3.79
5660 6056 8.871570 ACCTATCCTATTCTTCTAGGGAAAAA 57.128 34.615 0.00 0.00 39.08 1.94
5690 6086 2.945668 GCCCAGCTTATTACTGTTCCTG 59.054 50.000 0.00 0.00 33.09 3.86
5695 6091 5.352569 CCAGCTTATTACTGTTCCTGTTCTG 59.647 44.000 0.00 0.00 33.09 3.02
5718 6114 0.245266 GGGTTGTTTTATGCACCCCG 59.755 55.000 0.00 0.00 28.94 5.73
5722 6118 3.507786 GTTGTTTTATGCACCCCGATTC 58.492 45.455 0.00 0.00 0.00 2.52
5799 6195 3.008813 ACTCACATGAAGCTTGGAGATGT 59.991 43.478 2.10 3.94 0.00 3.06
5819 6215 7.637229 AGATGTGCAAGAAGAATTGAATATCG 58.363 34.615 0.00 0.00 39.87 2.92
6008 6404 2.231478 CGTAATCCTCGCCAGGTATGAT 59.769 50.000 0.00 0.00 41.28 2.45
6024 6420 7.423199 CAGGTATGATGAACAATTTCCATCAG 58.577 38.462 15.20 3.51 35.04 2.90
6055 6451 5.440610 CCTGTCCCTTTGCTTATGTAGATT 58.559 41.667 0.00 0.00 0.00 2.40
6198 6594 7.761704 TGATGCTTCTAAACTGAACTCTCATAC 59.238 37.037 0.88 0.00 0.00 2.39
6513 6913 1.213013 CCTCGAGACCAGACAACGG 59.787 63.158 15.71 0.00 0.00 4.44
6605 7007 1.811965 TCACATTGCTGTACATGGCAC 59.188 47.619 9.15 0.00 38.23 5.01
6611 7013 1.635663 GCTGTACATGGCACCACGTC 61.636 60.000 0.00 0.00 0.00 4.34
6612 7014 1.004320 TGTACATGGCACCACGTCC 60.004 57.895 0.00 0.00 0.00 4.79
6626 7028 2.671396 CCACGTCCGAGTTTTTCATAGG 59.329 50.000 0.00 0.00 0.00 2.57
6627 7029 2.671396 CACGTCCGAGTTTTTCATAGGG 59.329 50.000 0.00 0.00 0.00 3.53
6628 7030 2.277084 CGTCCGAGTTTTTCATAGGGG 58.723 52.381 0.00 0.00 0.00 4.79
6630 7032 3.119029 CGTCCGAGTTTTTCATAGGGGTA 60.119 47.826 0.00 0.00 0.00 3.69
6631 7033 4.439968 GTCCGAGTTTTTCATAGGGGTAG 58.560 47.826 0.00 0.00 0.00 3.18
6634 7049 4.634443 CCGAGTTTTTCATAGGGGTAGTTG 59.366 45.833 0.00 0.00 0.00 3.16
6644 7059 1.625818 AGGGGTAGTTGCACTGAAGAG 59.374 52.381 0.00 0.00 0.00 2.85
6645 7060 1.443802 GGGTAGTTGCACTGAAGAGC 58.556 55.000 0.00 0.00 0.00 4.09
6668 7083 1.270907 CTGTCTGGTCCTTACCTGCT 58.729 55.000 0.00 0.00 46.91 4.24
6689 7104 7.201679 CCTGCTCTAACTGATGGTTATTTCTTG 60.202 40.741 0.00 0.00 39.36 3.02
6865 7280 1.581934 TCTGCGATAATCCAAAGCCG 58.418 50.000 0.00 0.00 0.00 5.52
6907 7322 1.654954 GCGCGAGTGTCTAAGGAGGA 61.655 60.000 12.10 0.00 0.00 3.71
6966 7404 5.696724 GGTACATAATCGATTGGTTCCTCTG 59.303 44.000 20.87 7.37 0.00 3.35
7016 7454 7.682787 AGATGTTCTCCTTGTTGTCCTATAT 57.317 36.000 0.00 0.00 0.00 0.86
7026 7464 8.418662 TCCTTGTTGTCCTATATACATACACAC 58.581 37.037 0.00 0.00 0.00 3.82
7040 7478 1.165907 ACACACACGCTGGGACATTG 61.166 55.000 0.00 0.00 38.20 2.82
7053 7491 1.269517 GGACATTGAGCGCAACCAAAA 60.270 47.619 11.47 0.00 36.72 2.44
7055 7493 1.408702 ACATTGAGCGCAACCAAAACT 59.591 42.857 11.47 0.00 36.72 2.66
7097 7535 7.273381 GGTATACTTTTGCTAACATTGTTGCTG 59.727 37.037 12.30 3.92 0.00 4.41
7124 7562 9.981460 AAATAGTCAATAATATCATTCTCCCCC 57.019 33.333 0.00 0.00 0.00 5.40
7130 7568 7.295672 TCAATAATATCATTCTCCCCCTGTCTT 59.704 37.037 0.00 0.00 0.00 3.01
7131 7569 4.989875 ATATCATTCTCCCCCTGTCTTG 57.010 45.455 0.00 0.00 0.00 3.02
7142 7580 2.295885 CCCTGTCTTGGATGAGAATGC 58.704 52.381 0.00 0.00 0.00 3.56
7144 7582 1.938577 CTGTCTTGGATGAGAATGCGG 59.061 52.381 0.00 0.00 0.00 5.69
7150 7588 1.017387 GGATGAGAATGCGGGACAAC 58.983 55.000 0.00 0.00 0.00 3.32
7155 7593 2.499693 TGAGAATGCGGGACAACTATGA 59.500 45.455 0.00 0.00 0.00 2.15
7159 7597 5.680619 AGAATGCGGGACAACTATGATTAA 58.319 37.500 0.00 0.00 0.00 1.40
7168 7606 7.336396 GGGACAACTATGATTAACTTACTGGT 58.664 38.462 0.00 0.00 0.00 4.00
7177 7615 2.031495 AACTTACTGGTGAGGAGGCT 57.969 50.000 0.00 0.00 0.00 4.58
7185 7623 0.179000 GGTGAGGAGGCTACATGGTG 59.821 60.000 0.00 0.00 0.00 4.17
7201 7639 9.796120 GCTACATGGTGCAAGTTTAAAATATTA 57.204 29.630 0.00 0.00 0.00 0.98
7238 7676 4.633126 TCAAAGTGATGCTTAGAGTGATGC 59.367 41.667 0.00 0.00 36.17 3.91
7265 7704 8.424731 GTTTTTGCATAACATAGTTAAGTGTGC 58.575 33.333 6.93 6.37 33.45 4.57
7305 7744 5.620206 TCAATCTCAGTTCTTGGCAGTAAA 58.380 37.500 0.00 0.00 0.00 2.01
7325 7764 8.522830 CAGTAAATTGGATTGTTGATGTAACCT 58.477 33.333 0.00 0.00 38.55 3.50
7340 7779 8.918202 TGATGTAACCTCAAATTGAACTAACT 57.082 30.769 0.00 0.00 0.00 2.24
7349 7788 8.834465 CCTCAAATTGAACTAACTATCATGAGG 58.166 37.037 0.09 8.63 0.00 3.86
7351 7793 9.605275 TCAAATTGAACTAACTATCATGAGGAG 57.395 33.333 0.09 3.64 0.00 3.69
7372 7814 3.516615 GCTGATAGCGTTTCTCTGAAGT 58.483 45.455 0.00 0.00 0.00 3.01
7373 7815 3.305629 GCTGATAGCGTTTCTCTGAAGTG 59.694 47.826 0.00 0.00 0.00 3.16
7400 7865 6.657836 TGATTATATGAATGCTCTGATGCG 57.342 37.500 0.00 0.00 35.36 4.73
7419 7986 7.099120 TGATGCGCATCATACTACATTCTATT 58.901 34.615 41.41 8.15 42.42 1.73
7436 8015 7.069085 ACATTCTATTGGAAATCAATCACCCTG 59.931 37.037 0.00 0.00 44.32 4.45
7439 8018 7.638444 TCTATTGGAAATCAATCACCCTGTTA 58.362 34.615 0.00 0.00 44.32 2.41
7443 8030 6.754193 TGGAAATCAATCACCCTGTTAAAAC 58.246 36.000 0.00 0.00 0.00 2.43
7449 8036 6.754193 TCAATCACCCTGTTAAAACAAATCC 58.246 36.000 0.00 0.00 38.66 3.01
7482 8070 9.868277 TTTCTTTTGATGTTTATCACACAAACT 57.132 25.926 0.00 0.00 42.79 2.66
7483 8071 9.868277 TTCTTTTGATGTTTATCACACAAACTT 57.132 25.926 0.00 0.00 42.79 2.66
7499 8087 8.960591 CACACAAACTTAAATCCCATAGAATCT 58.039 33.333 0.00 0.00 0.00 2.40
7523 8111 2.513753 TGGGCACGACATTTCAATCTT 58.486 42.857 0.00 0.00 0.00 2.40
7584 8172 0.811281 AAAAGGCCAGCATCTAACGC 59.189 50.000 5.01 0.00 0.00 4.84
7585 8173 0.035056 AAAGGCCAGCATCTAACGCT 60.035 50.000 5.01 0.00 41.47 5.07
7586 8174 0.035056 AAGGCCAGCATCTAACGCTT 60.035 50.000 5.01 0.00 37.72 4.68
7587 8175 0.035056 AGGCCAGCATCTAACGCTTT 60.035 50.000 5.01 0.00 37.72 3.51
7588 8176 0.811281 GGCCAGCATCTAACGCTTTT 59.189 50.000 0.00 0.00 37.72 2.27
7589 8177 1.202348 GGCCAGCATCTAACGCTTTTT 59.798 47.619 0.00 0.00 37.72 1.94
7622 8210 6.351327 AGCAAAGCTTTATAGATCAACGAC 57.649 37.500 12.25 0.00 33.89 4.34
7623 8211 5.005779 AGCAAAGCTTTATAGATCAACGACG 59.994 40.000 12.25 0.00 33.89 5.12
7624 8212 5.191059 CAAAGCTTTATAGATCAACGACGC 58.809 41.667 12.25 0.00 0.00 5.19
7625 8213 4.308899 AGCTTTATAGATCAACGACGCT 57.691 40.909 0.00 0.00 0.00 5.07
7626 8214 4.291783 AGCTTTATAGATCAACGACGCTC 58.708 43.478 0.00 0.00 0.00 5.03
7627 8215 3.118157 GCTTTATAGATCAACGACGCTCG 59.882 47.826 0.00 5.97 46.93 5.03
7628 8216 2.963498 TATAGATCAACGACGCTCGG 57.037 50.000 11.13 0.00 45.59 4.63
7629 8217 0.311165 ATAGATCAACGACGCTCGGG 59.689 55.000 11.13 4.41 45.59 5.14
7630 8218 2.332362 TAGATCAACGACGCTCGGGC 62.332 60.000 0.00 0.00 45.59 6.13
7631 8219 3.982372 GATCAACGACGCTCGGGCA 62.982 63.158 8.62 0.00 45.59 5.36
7632 8220 3.371097 ATCAACGACGCTCGGGCAT 62.371 57.895 8.62 0.00 45.59 4.40
7633 8221 2.011741 ATCAACGACGCTCGGGCATA 62.012 55.000 8.62 0.00 45.59 3.14
7634 8222 1.591594 CAACGACGCTCGGGCATAT 60.592 57.895 8.62 0.00 45.59 1.78
7635 8223 1.299926 AACGACGCTCGGGCATATC 60.300 57.895 8.62 0.00 45.59 1.63
7636 8224 2.801162 CGACGCTCGGGCATATCG 60.801 66.667 8.62 9.87 36.00 2.92
7637 8225 3.106407 GACGCTCGGGCATATCGC 61.106 66.667 8.62 0.00 38.60 4.58
7646 8234 3.702555 GCATATCGCCCGACACGC 61.703 66.667 0.00 0.00 32.94 5.34
7647 8235 2.279186 CATATCGCCCGACACGCA 60.279 61.111 0.00 0.00 0.00 5.24
7648 8236 1.880796 CATATCGCCCGACACGCAA 60.881 57.895 0.00 0.00 0.00 4.85
7650 8238 2.011741 ATATCGCCCGACACGCAAGA 62.012 55.000 0.00 0.00 43.62 3.02
7651 8239 2.607668 TATCGCCCGACACGCAAGAG 62.608 60.000 0.00 0.00 43.62 2.85
7655 8243 4.680237 CCGACACGCAAGAGGCCA 62.680 66.667 5.01 0.00 40.31 5.36
7656 8244 3.414700 CGACACGCAAGAGGCCAC 61.415 66.667 5.01 0.00 40.31 5.01
7657 8245 2.031163 GACACGCAAGAGGCCACT 59.969 61.111 5.01 0.00 40.31 4.00
7658 8246 1.598130 GACACGCAAGAGGCCACTT 60.598 57.895 9.94 9.94 40.31 3.16
7659 8247 1.152963 ACACGCAAGAGGCCACTTT 60.153 52.632 13.29 0.00 40.31 2.66
7660 8248 1.283793 CACGCAAGAGGCCACTTTG 59.716 57.895 13.29 11.09 40.31 2.77
7661 8249 1.898574 ACGCAAGAGGCCACTTTGG 60.899 57.895 13.29 10.19 40.31 3.28
7662 8250 2.629656 CGCAAGAGGCCACTTTGGG 61.630 63.158 13.29 13.53 40.31 4.12
7669 8257 2.281900 GCCACTTTGGGCGGTACA 60.282 61.111 0.00 0.00 45.40 2.90
7670 8258 1.899534 GCCACTTTGGGCGGTACAA 60.900 57.895 0.00 0.00 45.40 2.41
7671 8259 1.248101 GCCACTTTGGGCGGTACAAT 61.248 55.000 0.00 0.00 45.40 2.71
7672 8260 1.951424 GCCACTTTGGGCGGTACAATA 60.951 52.381 0.00 0.00 45.40 1.90
7673 8261 2.014128 CCACTTTGGGCGGTACAATAG 58.986 52.381 0.00 0.00 32.67 1.73
7674 8262 2.617021 CCACTTTGGGCGGTACAATAGT 60.617 50.000 0.00 0.00 32.67 2.12
7675 8263 3.369681 CCACTTTGGGCGGTACAATAGTA 60.370 47.826 0.00 0.00 32.67 1.82
7676 8264 4.448210 CACTTTGGGCGGTACAATAGTAT 58.552 43.478 0.00 0.00 31.84 2.12
7677 8265 4.510340 CACTTTGGGCGGTACAATAGTATC 59.490 45.833 0.00 0.00 31.84 2.24
7678 8266 3.756933 TTGGGCGGTACAATAGTATCC 57.243 47.619 0.00 0.00 31.84 2.59
7679 8267 1.972795 TGGGCGGTACAATAGTATCCC 59.027 52.381 0.00 0.00 37.50 3.85
7680 8268 1.972795 GGGCGGTACAATAGTATCCCA 59.027 52.381 0.00 0.00 37.22 4.37
7681 8269 2.289257 GGGCGGTACAATAGTATCCCAC 60.289 54.545 0.00 0.00 37.22 4.61
7682 8270 2.631545 GGCGGTACAATAGTATCCCACT 59.368 50.000 0.00 0.00 41.62 4.00
7683 8271 3.305881 GGCGGTACAATAGTATCCCACTC 60.306 52.174 0.00 0.00 38.80 3.51
7684 8272 3.611057 GCGGTACAATAGTATCCCACTCG 60.611 52.174 0.00 0.00 38.80 4.18
7685 8273 3.817084 CGGTACAATAGTATCCCACTCGA 59.183 47.826 0.00 0.00 38.80 4.04
7686 8274 4.320057 CGGTACAATAGTATCCCACTCGAC 60.320 50.000 0.00 0.00 38.80 4.20
7687 8275 4.581824 GGTACAATAGTATCCCACTCGACA 59.418 45.833 0.00 0.00 38.80 4.35
7688 8276 4.920640 ACAATAGTATCCCACTCGACAG 57.079 45.455 0.00 0.00 38.80 3.51
7689 8277 3.068307 ACAATAGTATCCCACTCGACAGC 59.932 47.826 0.00 0.00 38.80 4.40
7690 8278 1.688772 TAGTATCCCACTCGACAGCC 58.311 55.000 0.00 0.00 38.80 4.85
7691 8279 1.065928 GTATCCCACTCGACAGCCG 59.934 63.158 0.00 0.00 40.25 5.52
7692 8280 1.379443 TATCCCACTCGACAGCCGT 60.379 57.895 0.00 0.00 39.75 5.68
7693 8281 1.663379 TATCCCACTCGACAGCCGTG 61.663 60.000 0.00 0.00 39.75 4.94
7694 8282 3.991051 CCCACTCGACAGCCGTGT 61.991 66.667 1.68 0.00 44.63 4.49
7695 8283 2.029073 CCACTCGACAGCCGTGTT 59.971 61.111 1.68 0.00 42.28 3.32
7696 8284 2.022129 CCACTCGACAGCCGTGTTC 61.022 63.158 1.68 0.00 42.28 3.18
7697 8285 2.050351 ACTCGACAGCCGTGTTCG 60.050 61.111 0.00 0.00 41.55 3.95
7707 8295 3.350377 CGTGTTCGGTGGGCAATT 58.650 55.556 0.00 0.00 0.00 2.32
7708 8296 2.545875 CGTGTTCGGTGGGCAATTA 58.454 52.632 0.00 0.00 0.00 1.40
7709 8297 0.167251 CGTGTTCGGTGGGCAATTAC 59.833 55.000 0.00 0.00 0.00 1.89
7710 8298 1.240256 GTGTTCGGTGGGCAATTACA 58.760 50.000 0.00 0.00 0.00 2.41
7711 8299 1.816224 GTGTTCGGTGGGCAATTACAT 59.184 47.619 0.00 0.00 0.00 2.29
7712 8300 2.230266 GTGTTCGGTGGGCAATTACATT 59.770 45.455 0.00 0.00 0.00 2.71
7713 8301 2.490115 TGTTCGGTGGGCAATTACATTC 59.510 45.455 0.00 0.00 0.00 2.67
7714 8302 2.490115 GTTCGGTGGGCAATTACATTCA 59.510 45.455 0.00 0.00 0.00 2.57
7715 8303 2.796557 TCGGTGGGCAATTACATTCAA 58.203 42.857 0.00 0.00 0.00 2.69
7716 8304 3.360867 TCGGTGGGCAATTACATTCAAT 58.639 40.909 0.00 0.00 0.00 2.57
7717 8305 3.766591 TCGGTGGGCAATTACATTCAATT 59.233 39.130 0.00 0.00 0.00 2.32
7718 8306 4.221703 TCGGTGGGCAATTACATTCAATTT 59.778 37.500 0.00 0.00 0.00 1.82
7719 8307 4.329528 CGGTGGGCAATTACATTCAATTTG 59.670 41.667 0.00 0.00 0.00 2.32
7720 8308 4.635324 GGTGGGCAATTACATTCAATTTGG 59.365 41.667 0.00 0.00 0.00 3.28
7721 8309 4.635324 GTGGGCAATTACATTCAATTTGGG 59.365 41.667 0.00 0.00 0.00 4.12
7722 8310 3.627123 GGGCAATTACATTCAATTTGGGC 59.373 43.478 0.00 0.00 0.00 5.36
7723 8311 4.516323 GGCAATTACATTCAATTTGGGCT 58.484 39.130 0.00 0.00 0.00 5.19
7724 8312 5.396213 GGGCAATTACATTCAATTTGGGCTA 60.396 40.000 0.00 0.00 0.00 3.93
7725 8313 6.112058 GGCAATTACATTCAATTTGGGCTAA 58.888 36.000 0.00 0.00 0.00 3.09
7726 8314 6.037062 GGCAATTACATTCAATTTGGGCTAAC 59.963 38.462 0.00 0.00 0.00 2.34
7727 8315 6.818142 GCAATTACATTCAATTTGGGCTAACT 59.182 34.615 0.00 0.00 0.00 2.24
7728 8316 7.010460 GCAATTACATTCAATTTGGGCTAACTC 59.990 37.037 0.00 0.00 0.00 3.01
7729 8317 4.701956 ACATTCAATTTGGGCTAACTCG 57.298 40.909 0.00 0.00 0.00 4.18
7730 8318 4.079253 ACATTCAATTTGGGCTAACTCGT 58.921 39.130 0.00 0.00 0.00 4.18
7731 8319 4.082787 ACATTCAATTTGGGCTAACTCGTG 60.083 41.667 0.00 0.00 0.00 4.35
7732 8320 3.410631 TCAATTTGGGCTAACTCGTGA 57.589 42.857 0.00 0.00 0.00 4.35
7733 8321 3.334691 TCAATTTGGGCTAACTCGTGAG 58.665 45.455 0.00 0.00 0.00 3.51
7734 8322 1.739067 ATTTGGGCTAACTCGTGAGC 58.261 50.000 0.00 0.00 38.00 4.26
7735 8323 0.669318 TTTGGGCTAACTCGTGAGCG 60.669 55.000 0.49 0.00 39.72 5.03
7736 8324 1.529152 TTGGGCTAACTCGTGAGCGA 61.529 55.000 0.49 0.00 45.79 4.93
7737 8325 1.516603 GGGCTAACTCGTGAGCGAC 60.517 63.158 0.49 0.00 42.81 5.19
7738 8326 1.211969 GGCTAACTCGTGAGCGACA 59.788 57.895 0.49 0.00 42.81 4.35
7739 8327 0.798771 GGCTAACTCGTGAGCGACAG 60.799 60.000 0.49 0.00 42.81 3.51
7740 8328 0.109689 GCTAACTCGTGAGCGACAGT 60.110 55.000 0.00 0.00 42.81 3.55
7741 8329 1.607713 CTAACTCGTGAGCGACAGTG 58.392 55.000 0.00 0.00 42.81 3.66
7742 8330 0.949397 TAACTCGTGAGCGACAGTGT 59.051 50.000 0.00 0.00 42.81 3.55
7743 8331 0.102481 AACTCGTGAGCGACAGTGTT 59.898 50.000 0.00 0.00 42.81 3.32
7744 8332 0.317938 ACTCGTGAGCGACAGTGTTC 60.318 55.000 0.00 0.00 42.81 3.18
7745 8333 0.317854 CTCGTGAGCGACAGTGTTCA 60.318 55.000 0.00 0.00 42.81 3.18
7746 8334 0.313987 TCGTGAGCGACAGTGTTCAT 59.686 50.000 0.00 0.00 42.81 2.57
7747 8335 0.436150 CGTGAGCGACAGTGTTCATG 59.564 55.000 0.00 0.00 41.33 3.07
7748 8336 0.792640 GTGAGCGACAGTGTTCATGG 59.207 55.000 0.00 0.00 0.00 3.66
7749 8337 0.392706 TGAGCGACAGTGTTCATGGT 59.607 50.000 0.00 0.00 0.00 3.55
7750 8338 1.202639 TGAGCGACAGTGTTCATGGTT 60.203 47.619 0.00 0.00 0.00 3.67
7751 8339 1.461127 GAGCGACAGTGTTCATGGTTC 59.539 52.381 0.00 0.00 0.00 3.62
7752 8340 0.163788 GCGACAGTGTTCATGGTTCG 59.836 55.000 0.00 0.00 0.00 3.95
7753 8341 1.497991 CGACAGTGTTCATGGTTCGT 58.502 50.000 0.00 0.00 0.00 3.85
7754 8342 1.455786 CGACAGTGTTCATGGTTCGTC 59.544 52.381 0.00 0.00 0.00 4.20
7755 8343 2.755650 GACAGTGTTCATGGTTCGTCT 58.244 47.619 0.00 0.00 0.00 4.18
7756 8344 3.610821 CGACAGTGTTCATGGTTCGTCTA 60.611 47.826 0.00 0.00 0.00 2.59
7757 8345 3.650139 ACAGTGTTCATGGTTCGTCTAC 58.350 45.455 0.00 0.00 0.00 2.59
7758 8346 2.661675 CAGTGTTCATGGTTCGTCTACG 59.338 50.000 0.00 0.00 41.45 3.51
7759 8347 1.389106 GTGTTCATGGTTCGTCTACGC 59.611 52.381 0.00 0.00 39.60 4.42
7760 8348 0.638746 GTTCATGGTTCGTCTACGCG 59.361 55.000 3.53 3.53 39.60 6.01
7761 8349 1.074319 TTCATGGTTCGTCTACGCGC 61.074 55.000 5.73 0.00 39.60 6.86
7762 8350 1.803922 CATGGTTCGTCTACGCGCA 60.804 57.895 5.73 0.00 39.60 6.09
7763 8351 1.516386 ATGGTTCGTCTACGCGCAG 60.516 57.895 5.73 1.58 39.60 5.18
7764 8352 2.126580 GGTTCGTCTACGCGCAGT 60.127 61.111 5.73 9.29 39.60 4.40
7765 8353 1.731969 GGTTCGTCTACGCGCAGTT 60.732 57.895 5.73 0.00 39.60 3.16
7766 8354 0.454957 GGTTCGTCTACGCGCAGTTA 60.455 55.000 5.73 0.00 39.60 2.24
7767 8355 0.632241 GTTCGTCTACGCGCAGTTAC 59.368 55.000 5.73 7.68 39.60 2.50
7768 8356 0.238025 TTCGTCTACGCGCAGTTACA 59.762 50.000 5.73 0.00 39.60 2.41
7769 8357 0.453282 TCGTCTACGCGCAGTTACAC 60.453 55.000 5.73 0.00 39.60 2.90
7770 8358 0.453950 CGTCTACGCGCAGTTACACT 60.454 55.000 5.73 0.00 0.00 3.55
7771 8359 1.257539 GTCTACGCGCAGTTACACTC 58.742 55.000 5.73 0.00 0.00 3.51
7772 8360 0.169672 TCTACGCGCAGTTACACTCC 59.830 55.000 5.73 0.00 0.00 3.85
7773 8361 0.109458 CTACGCGCAGTTACACTCCA 60.109 55.000 5.73 0.00 0.00 3.86
7774 8362 0.528924 TACGCGCAGTTACACTCCAT 59.471 50.000 5.73 0.00 0.00 3.41
7775 8363 0.736325 ACGCGCAGTTACACTCCATC 60.736 55.000 5.73 0.00 0.00 3.51
7776 8364 0.458543 CGCGCAGTTACACTCCATCT 60.459 55.000 8.75 0.00 0.00 2.90
7777 8365 1.002366 GCGCAGTTACACTCCATCTG 58.998 55.000 0.30 0.00 0.00 2.90
7778 8366 1.645034 CGCAGTTACACTCCATCTGG 58.355 55.000 0.00 0.00 0.00 3.86
7779 8367 1.204704 CGCAGTTACACTCCATCTGGA 59.795 52.381 0.00 0.00 43.08 3.86
7780 8368 2.353704 CGCAGTTACACTCCATCTGGAA 60.354 50.000 0.00 0.00 44.91 3.53
7781 8369 3.674997 GCAGTTACACTCCATCTGGAAA 58.325 45.455 0.00 0.00 44.91 3.13
7782 8370 4.072131 GCAGTTACACTCCATCTGGAAAA 58.928 43.478 0.00 0.00 44.91 2.29
7783 8371 4.083271 GCAGTTACACTCCATCTGGAAAAC 60.083 45.833 0.00 3.55 44.91 2.43
7784 8372 4.455877 CAGTTACACTCCATCTGGAAAACC 59.544 45.833 0.00 0.00 44.91 3.27
7785 8373 4.104102 AGTTACACTCCATCTGGAAAACCA 59.896 41.667 0.00 0.00 44.91 3.67
7786 8374 2.863809 ACACTCCATCTGGAAAACCAC 58.136 47.619 0.00 0.00 44.91 4.16
7787 8375 2.174639 ACACTCCATCTGGAAAACCACA 59.825 45.455 0.00 0.00 44.91 4.17
7788 8376 2.816087 CACTCCATCTGGAAAACCACAG 59.184 50.000 0.00 0.00 44.91 3.66
7789 8377 2.443255 ACTCCATCTGGAAAACCACAGT 59.557 45.455 0.00 0.00 44.91 3.55
7790 8378 3.117512 ACTCCATCTGGAAAACCACAGTT 60.118 43.478 0.00 0.00 44.91 3.16
7801 8389 4.649088 AAACCACAGTTTTAGCTGGAAC 57.351 40.909 0.00 0.69 43.82 3.62
7802 8390 3.577805 ACCACAGTTTTAGCTGGAACT 57.422 42.857 9.88 9.88 40.59 3.01
7803 8391 3.898482 ACCACAGTTTTAGCTGGAACTT 58.102 40.909 12.29 4.31 40.59 2.66
7804 8392 3.883489 ACCACAGTTTTAGCTGGAACTTC 59.117 43.478 12.29 0.00 40.59 3.01
7805 8393 3.058914 CCACAGTTTTAGCTGGAACTTCG 60.059 47.826 12.29 6.76 40.59 3.79
7806 8394 3.560068 CACAGTTTTAGCTGGAACTTCGT 59.440 43.478 12.29 7.26 40.59 3.85
7807 8395 4.748102 CACAGTTTTAGCTGGAACTTCGTA 59.252 41.667 12.29 0.00 40.59 3.43
7808 8396 5.408604 CACAGTTTTAGCTGGAACTTCGTAT 59.591 40.000 12.29 0.00 40.59 3.06
7809 8397 5.638234 ACAGTTTTAGCTGGAACTTCGTATC 59.362 40.000 12.29 0.00 40.59 2.24
7810 8398 5.869888 CAGTTTTAGCTGGAACTTCGTATCT 59.130 40.000 12.29 0.00 34.04 1.98
7811 8399 6.369065 CAGTTTTAGCTGGAACTTCGTATCTT 59.631 38.462 12.29 0.00 34.04 2.40
7812 8400 6.590677 AGTTTTAGCTGGAACTTCGTATCTTC 59.409 38.462 9.88 0.00 32.43 2.87
7813 8401 5.654603 TTAGCTGGAACTTCGTATCTTCA 57.345 39.130 0.00 0.00 0.00 3.02
7814 8402 4.537135 AGCTGGAACTTCGTATCTTCAA 57.463 40.909 0.00 0.00 0.00 2.69
7815 8403 5.091261 AGCTGGAACTTCGTATCTTCAAT 57.909 39.130 0.00 0.00 0.00 2.57
7816 8404 6.222038 AGCTGGAACTTCGTATCTTCAATA 57.778 37.500 0.00 0.00 0.00 1.90
7817 8405 6.640518 AGCTGGAACTTCGTATCTTCAATAA 58.359 36.000 0.00 0.00 0.00 1.40
7818 8406 7.275920 AGCTGGAACTTCGTATCTTCAATAAT 58.724 34.615 0.00 0.00 0.00 1.28
7819 8407 7.770897 AGCTGGAACTTCGTATCTTCAATAATT 59.229 33.333 0.00 0.00 0.00 1.40
7820 8408 7.852945 GCTGGAACTTCGTATCTTCAATAATTG 59.147 37.037 0.00 0.00 0.00 2.32
7821 8409 7.693952 TGGAACTTCGTATCTTCAATAATTGC 58.306 34.615 0.00 0.00 0.00 3.56
7822 8410 7.552687 TGGAACTTCGTATCTTCAATAATTGCT 59.447 33.333 0.00 0.00 0.00 3.91
7823 8411 7.852945 GGAACTTCGTATCTTCAATAATTGCTG 59.147 37.037 0.00 0.00 0.00 4.41
7824 8412 6.719365 ACTTCGTATCTTCAATAATTGCTGC 58.281 36.000 0.00 0.00 0.00 5.25
7825 8413 5.328886 TCGTATCTTCAATAATTGCTGCG 57.671 39.130 0.00 0.00 0.00 5.18
7826 8414 4.808895 TCGTATCTTCAATAATTGCTGCGT 59.191 37.500 0.00 0.00 0.00 5.24
7827 8415 5.980715 TCGTATCTTCAATAATTGCTGCGTA 59.019 36.000 0.00 0.00 0.00 4.42
7828 8416 6.065153 CGTATCTTCAATAATTGCTGCGTAC 58.935 40.000 0.00 0.00 0.00 3.67
7829 8417 4.514545 TCTTCAATAATTGCTGCGTACG 57.485 40.909 11.84 11.84 0.00 3.67
7830 8418 3.308595 TCTTCAATAATTGCTGCGTACGG 59.691 43.478 18.39 1.85 0.00 4.02
7840 8428 2.412112 GCGTACGGCGAGGAATCT 59.588 61.111 16.62 0.00 44.77 2.40
7841 8429 1.650912 GCGTACGGCGAGGAATCTA 59.349 57.895 16.62 0.00 44.77 1.98
7842 8430 0.659711 GCGTACGGCGAGGAATCTAC 60.660 60.000 16.62 2.29 44.77 2.59
7843 8431 0.942962 CGTACGGCGAGGAATCTACT 59.057 55.000 16.62 0.00 44.77 2.57
7844 8432 1.070041 CGTACGGCGAGGAATCTACTC 60.070 57.143 16.62 0.00 44.77 2.59
7851 8439 0.389757 GAGGAATCTACTCGGTGGGC 59.610 60.000 0.00 0.00 0.00 5.36
7852 8440 0.325296 AGGAATCTACTCGGTGGGCA 60.325 55.000 0.00 0.00 0.00 5.36
7853 8441 0.759346 GGAATCTACTCGGTGGGCAT 59.241 55.000 0.00 0.00 0.00 4.40
7854 8442 1.270358 GGAATCTACTCGGTGGGCATC 60.270 57.143 0.00 0.00 0.00 3.91
7855 8443 0.759346 AATCTACTCGGTGGGCATCC 59.241 55.000 0.00 0.00 0.00 3.51
7856 8444 0.398522 ATCTACTCGGTGGGCATCCA 60.399 55.000 0.00 0.00 41.58 3.41
7857 8445 0.398522 TCTACTCGGTGGGCATCCAT 60.399 55.000 0.00 0.00 46.09 3.41
7858 8446 0.469917 CTACTCGGTGGGCATCCATT 59.530 55.000 0.00 0.00 46.09 3.16
7859 8447 0.180171 TACTCGGTGGGCATCCATTG 59.820 55.000 0.00 0.00 46.09 2.82
7867 8455 3.599704 GCATCCATTGCCTCGGCC 61.600 66.667 5.33 0.00 46.15 6.13
7868 8456 2.124193 CATCCATTGCCTCGGCCA 60.124 61.111 2.24 0.00 41.09 5.36
7869 8457 2.191513 CATCCATTGCCTCGGCCAG 61.192 63.158 2.24 0.00 41.09 4.85
7870 8458 4.802051 TCCATTGCCTCGGCCAGC 62.802 66.667 2.24 2.39 41.09 4.85
7872 8460 3.515286 CATTGCCTCGGCCAGCAG 61.515 66.667 11.48 0.00 40.73 4.24
7881 8469 4.828925 GGCCAGCAGCTCGGAGTC 62.829 72.222 13.41 0.00 43.05 3.36
7882 8470 4.828925 GCCAGCAGCTCGGAGTCC 62.829 72.222 13.41 0.00 38.99 3.85
7894 8482 2.656560 CGGAGTCCGTCTCAAAGATT 57.343 50.000 23.83 0.00 44.40 2.40
7895 8483 2.263077 CGGAGTCCGTCTCAAAGATTG 58.737 52.381 23.83 0.00 44.40 2.67
7896 8484 2.003301 GGAGTCCGTCTCAAAGATTGC 58.997 52.381 0.00 0.00 44.40 3.56
7897 8485 2.003301 GAGTCCGTCTCAAAGATTGCC 58.997 52.381 0.90 0.00 42.34 4.52
7898 8486 1.087501 GTCCGTCTCAAAGATTGCCC 58.912 55.000 0.00 0.00 0.00 5.36
7899 8487 0.391130 TCCGTCTCAAAGATTGCCCG 60.391 55.000 0.00 0.00 0.00 6.13
7900 8488 1.369091 CCGTCTCAAAGATTGCCCGG 61.369 60.000 0.00 0.00 0.00 5.73
7901 8489 0.391130 CGTCTCAAAGATTGCCCGGA 60.391 55.000 0.73 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 9.338622 GCCAGCTTTATCTTTATCTTTACCTAA 57.661 33.333 0.00 0.00 0.00 2.69
65 66 8.714906 AGCCAGCTTTATCTTTATCTTTACCTA 58.285 33.333 0.00 0.00 0.00 3.08
66 67 7.578203 AGCCAGCTTTATCTTTATCTTTACCT 58.422 34.615 0.00 0.00 0.00 3.08
67 68 7.809546 AGCCAGCTTTATCTTTATCTTTACC 57.190 36.000 0.00 0.00 0.00 2.85
71 72 9.072375 GGATTAAGCCAGCTTTATCTTTATCTT 57.928 33.333 23.18 0.00 40.13 2.40
72 73 8.443979 AGGATTAAGCCAGCTTTATCTTTATCT 58.556 33.333 23.18 13.10 40.13 1.98
73 74 8.628630 AGGATTAAGCCAGCTTTATCTTTATC 57.371 34.615 23.18 11.56 40.13 1.75
75 76 9.914834 TTTAGGATTAAGCCAGCTTTATCTTTA 57.085 29.630 23.18 15.96 40.13 1.85
76 77 8.823220 TTTAGGATTAAGCCAGCTTTATCTTT 57.177 30.769 23.18 16.67 40.13 2.52
77 78 8.823220 TTTTAGGATTAAGCCAGCTTTATCTT 57.177 30.769 23.18 19.98 40.13 2.40
78 79 8.823220 TTTTTAGGATTAAGCCAGCTTTATCT 57.177 30.769 23.18 15.03 40.13 1.98
103 104 1.303643 CTCCCGGAGCTGGCTTTTT 60.304 57.895 0.73 0.00 0.00 1.94
104 105 2.352805 CTCCCGGAGCTGGCTTTT 59.647 61.111 0.73 0.00 0.00 2.27
105 106 3.721706 CCTCCCGGAGCTGGCTTT 61.722 66.667 9.17 0.00 0.00 3.51
149 150 1.607148 TCCACGAGATATCGCACGAAT 59.393 47.619 10.14 0.00 36.44 3.34
240 294 1.077429 GCTCCAACCTGGTGGATCC 60.077 63.158 15.37 4.20 46.66 3.36
262 316 4.730949 TGTCTTGTACCAGTGGCTATAC 57.269 45.455 9.78 5.24 0.00 1.47
354 433 0.254178 GTCATCCTCCAGCACCATGT 59.746 55.000 0.00 0.00 0.00 3.21
401 480 1.462731 ATGCTTTGCTGGTTTCCGCA 61.463 50.000 0.00 0.00 33.08 5.69
442 525 9.360093 GCTACATATACTCCTGTTGCTAATTAG 57.640 37.037 8.20 8.20 39.79 1.73
462 545 3.423539 TCTTTGGCAACTCAGCTACAT 57.576 42.857 0.00 0.00 37.61 2.29
463 546 2.928801 TCTTTGGCAACTCAGCTACA 57.071 45.000 0.00 0.00 37.61 2.74
485 569 0.330604 ACAGGAGCCCGAGTACTGTA 59.669 55.000 0.00 0.00 40.31 2.74
491 575 1.597461 GCTTAACAGGAGCCCGAGT 59.403 57.895 0.00 0.00 34.06 4.18
539 623 4.083696 GGCTCGCTTGATAGTACTCTAGAC 60.084 50.000 0.00 0.00 0.00 2.59
551 635 0.669077 CTACGGTAGGCTCGCTTGAT 59.331 55.000 7.30 0.00 0.00 2.57
650 742 1.521450 GGTTGGTCGAGTCAGGTCGA 61.521 60.000 0.00 0.00 46.52 4.20
653 745 1.746517 GTGGTTGGTCGAGTCAGGT 59.253 57.895 0.00 0.00 0.00 4.00
654 746 1.372997 CGTGGTTGGTCGAGTCAGG 60.373 63.158 0.00 0.00 0.00 3.86
656 748 2.028484 GCGTGGTTGGTCGAGTCA 59.972 61.111 0.00 0.00 0.00 3.41
705 806 1.304952 CTCCTCGTGTCCCTCTCCT 59.695 63.158 0.00 0.00 0.00 3.69
831 938 1.846439 GTTGAGATGGGAATGGGAGGA 59.154 52.381 0.00 0.00 0.00 3.71
1011 1129 2.580815 CAGAGCGGGTGCATCTCA 59.419 61.111 0.00 0.00 46.23 3.27
1070 1188 2.282040 AGTCCCCGTCGTCTTCGT 60.282 61.111 0.00 0.00 38.33 3.85
1132 1253 1.609580 GCCGATGTTGGTCCACTTGTA 60.610 52.381 0.00 0.00 0.00 2.41
1332 1456 5.048713 AGACGAAACCTTCAAATGGATGAAC 60.049 40.000 0.00 0.00 35.55 3.18
1336 1460 4.651778 TGAGACGAAACCTTCAAATGGAT 58.348 39.130 0.00 0.00 0.00 3.41
1342 1466 4.714632 AGGAAATGAGACGAAACCTTCAA 58.285 39.130 0.00 0.00 0.00 2.69
1344 1468 3.685272 GGAGGAAATGAGACGAAACCTTC 59.315 47.826 0.00 0.00 0.00 3.46
1350 1474 0.909623 GGGGGAGGAAATGAGACGAA 59.090 55.000 0.00 0.00 0.00 3.85
1430 1554 5.957842 AATAGTTGAATCGCCAGTTGAAA 57.042 34.783 0.00 0.00 0.00 2.69
1431 1555 5.957842 AAATAGTTGAATCGCCAGTTGAA 57.042 34.783 0.00 0.00 0.00 2.69
1434 1558 5.010617 ACCAAAAATAGTTGAATCGCCAGTT 59.989 36.000 0.00 0.00 0.00 3.16
1435 1559 4.522789 ACCAAAAATAGTTGAATCGCCAGT 59.477 37.500 0.00 0.00 0.00 4.00
1437 1617 5.461032 AACCAAAAATAGTTGAATCGCCA 57.539 34.783 0.00 0.00 0.00 5.69
1499 1681 2.723618 CGCGGAAATACCAACTCGTTTG 60.724 50.000 0.00 0.00 38.90 2.93
1748 1938 1.790387 GCCGATGCAGACACTGTTC 59.210 57.895 0.00 0.00 37.47 3.18
1958 2157 4.084287 TCCATCTAGTACGACACAAACCT 58.916 43.478 0.00 0.00 0.00 3.50
1972 2171 4.115516 CAAACTCACGGACATCCATCTAG 58.884 47.826 0.00 0.00 35.14 2.43
1997 2196 2.870119 CGTACCACCCCACGTTCCA 61.870 63.158 0.00 0.00 33.56 3.53
2030 2230 1.482182 GGCAAGCCCCTTTAAATGGAG 59.518 52.381 10.80 3.07 0.00 3.86
2096 2299 2.674796 ACATAAAGGACGCTGACTCC 57.325 50.000 0.00 0.00 0.00 3.85
2181 2386 1.656587 TCCTCCCAGCACTGTAATGT 58.343 50.000 0.00 0.00 0.00 2.71
2256 2461 9.790344 CAATATTTTGATCAGTCTCCTAGGATT 57.210 33.333 13.12 0.00 34.60 3.01
2327 2532 1.662517 ATTCATGCGGCGATTACACA 58.337 45.000 12.98 0.00 0.00 3.72
2420 2626 1.142870 ACCAGACTGGCACTTTAAGCA 59.857 47.619 21.95 0.00 42.67 3.91
2433 2639 8.860088 AGAATTACAAAAATTAGCAACCAGACT 58.140 29.630 0.00 0.00 0.00 3.24
2461 2667 8.489990 AATGATGAGATCTACAAACAGTTCAG 57.510 34.615 0.00 0.00 0.00 3.02
2526 2732 1.318576 GAAGTGTCTTGGTTGGGGTG 58.681 55.000 0.00 0.00 0.00 4.61
2745 2951 6.588756 TCTGTACGTGATACTGTGAAAATTCC 59.411 38.462 0.00 0.00 34.99 3.01
2775 2981 2.010145 AATACGATTCACAGCGCTGT 57.990 45.000 36.44 36.44 46.17 4.40
2781 2987 8.004344 CCGATAAAGCTTAAATACGATTCACAG 58.996 37.037 0.00 0.00 0.00 3.66
2820 3026 5.006386 CCAAGAAGCATTACCTCAAGTTCT 58.994 41.667 0.00 0.00 0.00 3.01
2860 3066 5.051816 ACCAAAAAGTGCATGATTTGTCTG 58.948 37.500 15.41 7.03 32.29 3.51
2916 3122 5.248248 TGAGTATGACCATCAAGTTCCTTCA 59.752 40.000 0.00 0.00 0.00 3.02
2939 3145 6.079763 CGTTCATTCATCACTAAAGTTGGTG 58.920 40.000 1.38 1.38 40.54 4.17
2954 3160 4.319190 CCGCAAGTTCTTAACGTTCATTCA 60.319 41.667 2.82 0.00 36.23 2.57
2960 3166 2.288729 GGTTCCGCAAGTTCTTAACGTT 59.711 45.455 5.88 5.88 36.23 3.99
3002 3208 5.163513 GGCACAACTAAGAACATCAATTGG 58.836 41.667 5.42 0.00 0.00 3.16
3046 3295 4.916041 AGGAAGACAATCACATGGAAGA 57.084 40.909 0.00 0.00 0.00 2.87
3101 3350 7.173218 GGATAATATTGCTAGCAAGTGCAGTAA 59.827 37.037 31.88 14.01 45.16 2.24
3141 3390 0.755686 GGCTGAGATGGTGGTCCTAG 59.244 60.000 0.00 0.00 34.23 3.02
3142 3391 0.339859 AGGCTGAGATGGTGGTCCTA 59.660 55.000 0.00 0.00 34.23 2.94
3162 3413 9.143631 AGCAAAAACTATTAAAGCTATTGCAAG 57.856 29.630 4.94 0.00 40.12 4.01
3172 3423 9.827411 GTCACCTTCTAGCAAAAACTATTAAAG 57.173 33.333 0.00 0.00 0.00 1.85
3239 3490 5.249420 ACATCTAAAAGGGTCTCTTTGCTC 58.751 41.667 0.00 0.00 44.30 4.26
3260 3511 7.907389 ACAGGTTGAGTATCTTCATCTTTACA 58.093 34.615 0.00 0.00 34.92 2.41
3279 3530 7.039293 GGGTTTCCTTGTCATTTATAACAGGTT 60.039 37.037 0.00 0.00 0.00 3.50
3315 3566 3.776969 AGTGCCTATGAGGAAATGTCTGA 59.223 43.478 0.00 0.00 37.67 3.27
3318 3569 4.142609 TCAGTGCCTATGAGGAAATGTC 57.857 45.455 1.03 0.00 39.94 3.06
3413 3667 0.482446 TGGCCCAGACTCCAAACAAT 59.518 50.000 0.00 0.00 0.00 2.71
3429 3683 9.252962 CCATCAATTTATTATTTGAGTTCTGGC 57.747 33.333 0.00 0.00 35.47 4.85
3512 3766 5.744171 TGCATCTTCTGAATTAACTGCCTA 58.256 37.500 0.00 0.00 0.00 3.93
3547 3801 2.831685 ACAACTGCGACTGTGGATTA 57.168 45.000 0.00 0.00 0.00 1.75
3732 3988 8.706322 AAACACAGGTAATTGGAGAAACTAAT 57.294 30.769 0.00 0.00 0.00 1.73
3815 4071 4.730035 GCAGTCTAACATCAGCAATTCAGC 60.730 45.833 0.00 0.00 0.00 4.26
3816 4072 4.634883 AGCAGTCTAACATCAGCAATTCAG 59.365 41.667 0.00 0.00 0.00 3.02
3817 4073 4.582869 AGCAGTCTAACATCAGCAATTCA 58.417 39.130 0.00 0.00 0.00 2.57
3818 4074 5.353678 AGAAGCAGTCTAACATCAGCAATTC 59.646 40.000 0.00 0.00 33.56 2.17
3819 4075 5.251764 AGAAGCAGTCTAACATCAGCAATT 58.748 37.500 0.00 0.00 33.56 2.32
3820 4076 4.841422 AGAAGCAGTCTAACATCAGCAAT 58.159 39.130 0.00 0.00 33.56 3.56
3821 4077 4.277515 AGAAGCAGTCTAACATCAGCAA 57.722 40.909 0.00 0.00 33.56 3.91
3822 4078 3.969287 AGAAGCAGTCTAACATCAGCA 57.031 42.857 0.00 0.00 33.56 4.41
3869 4126 4.340666 TGCAAGAAAAATCACAGGTGCTTA 59.659 37.500 0.00 0.00 0.00 3.09
3882 4139 7.504238 TCCAGGTAAAATAGAGTGCAAGAAAAA 59.496 33.333 0.00 0.00 0.00 1.94
3895 4152 5.297776 CCATGAAGCAGTCCAGGTAAAATAG 59.702 44.000 0.00 0.00 0.00 1.73
3896 4153 5.192927 CCATGAAGCAGTCCAGGTAAAATA 58.807 41.667 0.00 0.00 0.00 1.40
4034 4291 1.408683 GCAATGATAGTCACTGCCCCA 60.409 52.381 2.24 0.00 43.09 4.96
4050 4307 0.802494 GTTGATGTCGAACGGGCAAT 59.198 50.000 0.00 0.00 0.00 3.56
4074 4331 4.336713 GCCTGAATTTCTACCATGGTCTTC 59.663 45.833 23.76 16.74 0.00 2.87
4102 4359 8.773645 CAAACATAGATGAGTTGTAACAGTCAA 58.226 33.333 0.00 0.00 0.00 3.18
4135 4392 7.815068 GCATGGTCTACGTATTCAGATTAATCT 59.185 37.037 12.37 12.37 37.72 2.40
4150 4407 3.436700 TGTAGTGATGCATGGTCTACG 57.563 47.619 2.46 0.00 35.26 3.51
4160 4417 5.207768 CGCCAAATAAAGATGTAGTGATGC 58.792 41.667 0.00 0.00 0.00 3.91
4233 4490 5.833131 TGATGGCAAAGAAGAAAAAGTAGGT 59.167 36.000 0.00 0.00 0.00 3.08
4307 4564 8.632906 AAACTCATCTTCATCTGACATTTTCT 57.367 30.769 0.00 0.00 0.00 2.52
4512 4769 4.984146 AAGGCTAACACTTCTCTCCTTT 57.016 40.909 0.00 0.00 0.00 3.11
4801 5071 0.097674 CAAAGTGCATGCTACTCGGC 59.902 55.000 20.33 0.59 0.00 5.54
4894 5290 5.416083 TCTGGGATAAGTACACATGAAACG 58.584 41.667 0.00 0.00 0.00 3.60
4949 5345 0.321564 TCAGACCATTGCCCTGAACG 60.322 55.000 0.00 0.00 34.38 3.95
5090 5486 7.803279 AACCTTTTCAGAGAAGAAACGTATT 57.197 32.000 2.14 0.00 37.24 1.89
5137 5533 3.721035 CACTGGATCGCATGACAGAATA 58.279 45.455 0.00 0.00 35.08 1.75
5272 5668 3.242316 CGCAACGAAACTCTTAATAGGCC 60.242 47.826 0.00 0.00 0.00 5.19
5390 5786 4.346709 TCTCCCCAAAATTTCCAACCTTTC 59.653 41.667 0.00 0.00 0.00 2.62
5421 5817 6.473758 ACTGACCCCAGAATTTACTCTTTAC 58.526 40.000 0.00 0.00 43.02 2.01
5454 5850 5.491982 GGTTAATATGCCACTAGGATCCAG 58.508 45.833 15.82 11.76 36.89 3.86
5539 5935 8.662781 TCATGGACAACTAAAATAGTATGAGC 57.337 34.615 0.00 0.00 38.26 4.26
5551 5947 6.761242 CGAGAATGGTAATCATGGACAACTAA 59.239 38.462 0.00 0.00 35.99 2.24
5555 5951 5.351948 TCGAGAATGGTAATCATGGACAA 57.648 39.130 0.00 0.00 35.99 3.18
5557 5953 6.867662 ATTTCGAGAATGGTAATCATGGAC 57.132 37.500 0.00 0.00 35.99 4.02
5690 6086 3.679502 GCATAAAACAACCCATGCAGAAC 59.320 43.478 0.00 0.00 42.61 3.01
5695 6091 2.345876 GGTGCATAAAACAACCCATGC 58.654 47.619 0.00 0.00 43.22 4.06
5758 6154 6.096423 TGTGAGTAGTGTCAGTGTTTTCTAGT 59.904 38.462 0.00 0.00 0.00 2.57
5772 6168 3.324846 TCCAAGCTTCATGTGAGTAGTGT 59.675 43.478 0.00 0.00 0.00 3.55
5799 6195 8.296000 TCAAAACGATATTCAATTCTTCTTGCA 58.704 29.630 0.00 0.00 0.00 4.08
6008 6404 4.083324 GCGAAGTCTGATGGAAATTGTTCA 60.083 41.667 0.00 0.00 35.25 3.18
6024 6420 0.955919 CAAAGGGACAGGGCGAAGTC 60.956 60.000 0.00 0.00 0.00 3.01
6198 6594 1.703438 GCCAGCGCTCTGATGTGAAG 61.703 60.000 7.13 0.00 42.95 3.02
6392 6789 4.093556 GTGGAAGCTTCTCCTAAAATGACG 59.906 45.833 25.05 0.00 36.35 4.35
6523 6923 9.413734 GTAGGACACTATAAAGAACTAGGGTAA 57.586 37.037 0.00 0.00 31.81 2.85
6605 7007 2.671396 CCTATGAAAAACTCGGACGTGG 59.329 50.000 0.00 0.00 0.00 4.94
6611 7013 4.482952 ACTACCCCTATGAAAAACTCGG 57.517 45.455 0.00 0.00 0.00 4.63
6612 7014 4.094442 GCAACTACCCCTATGAAAAACTCG 59.906 45.833 0.00 0.00 0.00 4.18
6631 7033 2.072298 CAGGTAGCTCTTCAGTGCAAC 58.928 52.381 0.00 0.00 37.04 4.17
6634 7049 1.548269 AGACAGGTAGCTCTTCAGTGC 59.452 52.381 0.00 0.00 35.00 4.40
6663 7078 6.352516 AGAAATAACCATCAGTTAGAGCAGG 58.647 40.000 0.00 0.00 44.07 4.85
6668 7083 8.383175 AGGAACAAGAAATAACCATCAGTTAGA 58.617 33.333 0.00 0.00 44.07 2.10
6689 7104 3.751518 TCCTTGCCTGTTTAAGAGGAAC 58.248 45.455 12.62 0.00 31.48 3.62
6853 7268 1.747367 CACCCGCGGCTTTGGATTA 60.747 57.895 22.85 0.00 0.00 1.75
6907 7322 1.616865 TGCTGTCAACGCCTACTACTT 59.383 47.619 0.00 0.00 0.00 2.24
6952 7368 3.533606 AGATGTCAGAGGAACCAATCG 57.466 47.619 0.00 0.00 0.00 3.34
6966 7404 6.578023 AGCTCTTCTTTGTACCATAGATGTC 58.422 40.000 0.00 0.00 0.00 3.06
7016 7454 1.067425 GTCCCAGCGTGTGTGTATGTA 60.067 52.381 0.00 0.00 0.00 2.29
7026 7464 3.181367 GCTCAATGTCCCAGCGTG 58.819 61.111 0.00 0.00 0.00 5.34
7040 7478 3.831715 ATTAGAGTTTTGGTTGCGCTC 57.168 42.857 9.73 1.18 0.00 5.03
7119 7557 0.417437 TCTCATCCAAGACAGGGGGA 59.583 55.000 0.00 0.00 34.70 4.81
7124 7562 1.938577 CCGCATTCTCATCCAAGACAG 59.061 52.381 0.00 0.00 0.00 3.51
7130 7568 0.617935 TTGTCCCGCATTCTCATCCA 59.382 50.000 0.00 0.00 0.00 3.41
7131 7569 1.017387 GTTGTCCCGCATTCTCATCC 58.983 55.000 0.00 0.00 0.00 3.51
7142 7580 6.479001 CCAGTAAGTTAATCATAGTTGTCCCG 59.521 42.308 0.00 0.00 0.00 5.14
7144 7582 8.038944 TCACCAGTAAGTTAATCATAGTTGTCC 58.961 37.037 0.00 0.00 0.00 4.02
7150 7588 7.437748 CCTCCTCACCAGTAAGTTAATCATAG 58.562 42.308 0.00 0.00 0.00 2.23
7155 7593 4.104831 AGCCTCCTCACCAGTAAGTTAAT 58.895 43.478 0.00 0.00 0.00 1.40
7159 7597 2.225293 TGTAGCCTCCTCACCAGTAAGT 60.225 50.000 0.00 0.00 0.00 2.24
7168 7606 0.909133 TGCACCATGTAGCCTCCTCA 60.909 55.000 4.42 0.00 0.00 3.86
7201 7639 7.341256 AGCATCACTTTGATTCATGGAGTAAAT 59.659 33.333 0.00 0.00 34.28 1.40
7238 7676 8.626576 CACACTTAACTATGTTATGCAAAAACG 58.373 33.333 9.85 0.00 0.00 3.60
7247 7686 3.554324 CGCCGCACACTTAACTATGTTAT 59.446 43.478 0.00 0.00 0.00 1.89
7289 7728 5.649782 ATCCAATTTACTGCCAAGAACTG 57.350 39.130 0.00 0.00 0.00 3.16
7305 7744 7.537596 TTTGAGGTTACATCAACAATCCAAT 57.462 32.000 12.09 0.00 39.04 3.16
7325 7764 9.605275 CTCCTCATGATAGTTAGTTCAATTTGA 57.395 33.333 0.00 0.00 0.00 2.69
7340 7779 3.425659 ACGCTATCAGCTCCTCATGATA 58.574 45.455 0.00 0.00 39.60 2.15
7349 7788 3.428746 TCAGAGAAACGCTATCAGCTC 57.571 47.619 0.00 0.00 39.60 4.09
7351 7793 3.305629 CACTTCAGAGAAACGCTATCAGC 59.694 47.826 0.00 0.00 38.02 4.26
7358 7800 4.732285 TCAAATCACTTCAGAGAAACGC 57.268 40.909 0.00 0.00 0.00 4.84
7373 7815 9.504710 GCATCAGAGCATTCATATAATCAAATC 57.495 33.333 0.00 0.00 0.00 2.17
7419 7986 6.325028 TGTTTTAACAGGGTGATTGATTTCCA 59.675 34.615 0.00 0.00 34.30 3.53
7479 8067 9.359653 CCATTCAGATTCTATGGGATTTAAGTT 57.640 33.333 7.37 0.00 36.10 2.66
7480 8068 8.930846 CCATTCAGATTCTATGGGATTTAAGT 57.069 34.615 7.37 0.00 36.10 2.24
7499 8087 1.902938 TGAAATGTCGTGCCCATTCA 58.097 45.000 0.00 0.00 31.49 2.57
7509 8097 9.179552 TGAAAAATACACAAGATTGAAATGTCG 57.820 29.630 0.00 0.00 0.00 4.35
7567 8155 0.035056 AAGCGTTAGATGCTGGCCTT 60.035 50.000 3.32 0.00 40.06 4.35
7599 8187 5.005779 CGTCGTTGATCTATAAAGCTTTGCT 59.994 40.000 22.02 11.18 42.56 3.91
7600 8188 5.191059 CGTCGTTGATCTATAAAGCTTTGC 58.809 41.667 22.02 4.80 0.00 3.68
7601 8189 5.005779 AGCGTCGTTGATCTATAAAGCTTTG 59.994 40.000 22.02 5.30 0.00 2.77
7602 8190 5.109903 AGCGTCGTTGATCTATAAAGCTTT 58.890 37.500 17.30 17.30 0.00 3.51
7603 8191 4.683832 AGCGTCGTTGATCTATAAAGCTT 58.316 39.130 0.00 0.00 0.00 3.74
7604 8192 4.291783 GAGCGTCGTTGATCTATAAAGCT 58.708 43.478 0.00 0.00 0.00 3.74
7605 8193 3.118157 CGAGCGTCGTTGATCTATAAAGC 59.882 47.826 0.00 0.00 34.72 3.51
7606 8194 3.664486 CCGAGCGTCGTTGATCTATAAAG 59.336 47.826 0.00 0.00 38.40 1.85
7607 8195 3.549423 CCCGAGCGTCGTTGATCTATAAA 60.549 47.826 0.00 0.00 38.40 1.40
7608 8196 2.031420 CCCGAGCGTCGTTGATCTATAA 60.031 50.000 0.00 0.00 38.40 0.98
7609 8197 1.534163 CCCGAGCGTCGTTGATCTATA 59.466 52.381 0.00 0.00 38.40 1.31
7610 8198 0.311165 CCCGAGCGTCGTTGATCTAT 59.689 55.000 0.00 0.00 38.40 1.98
7611 8199 1.725665 CCCGAGCGTCGTTGATCTA 59.274 57.895 0.00 0.00 38.40 1.98
7612 8200 2.490217 CCCGAGCGTCGTTGATCT 59.510 61.111 0.00 0.00 38.40 2.75
7613 8201 3.255379 GCCCGAGCGTCGTTGATC 61.255 66.667 0.00 0.00 38.40 2.92
7614 8202 2.011741 TATGCCCGAGCGTCGTTGAT 62.012 55.000 0.00 0.00 44.31 2.57
7615 8203 2.011741 ATATGCCCGAGCGTCGTTGA 62.012 55.000 0.00 0.00 44.31 3.18
7616 8204 1.548973 GATATGCCCGAGCGTCGTTG 61.549 60.000 0.00 0.24 44.31 4.10
7617 8205 1.299926 GATATGCCCGAGCGTCGTT 60.300 57.895 0.00 0.00 44.31 3.85
7618 8206 2.335369 GATATGCCCGAGCGTCGT 59.665 61.111 0.00 0.00 44.31 4.34
7619 8207 2.801162 CGATATGCCCGAGCGTCG 60.801 66.667 0.00 0.00 44.31 5.12
7620 8208 3.106407 GCGATATGCCCGAGCGTC 61.106 66.667 0.00 0.00 44.31 5.19
7629 8217 3.702555 GCGTGTCGGGCGATATGC 61.703 66.667 0.00 0.00 40.10 3.14
7630 8218 1.821241 CTTGCGTGTCGGGCGATATG 61.821 60.000 0.00 0.00 0.00 1.78
7631 8219 1.591594 CTTGCGTGTCGGGCGATAT 60.592 57.895 0.00 0.00 0.00 1.63
7632 8220 2.202690 CTTGCGTGTCGGGCGATA 60.203 61.111 0.00 0.00 0.00 2.92
7633 8221 3.989698 CTCTTGCGTGTCGGGCGAT 62.990 63.158 0.00 0.00 0.00 4.58
7634 8222 4.717629 CTCTTGCGTGTCGGGCGA 62.718 66.667 0.00 0.00 0.00 5.54
7638 8226 4.680237 TGGCCTCTTGCGTGTCGG 62.680 66.667 3.32 0.00 42.61 4.79
7639 8227 3.414700 GTGGCCTCTTGCGTGTCG 61.415 66.667 3.32 0.00 42.61 4.35
7640 8228 1.166531 AAAGTGGCCTCTTGCGTGTC 61.167 55.000 20.33 0.00 42.61 3.67
7641 8229 1.152963 AAAGTGGCCTCTTGCGTGT 60.153 52.632 20.33 1.86 42.61 4.49
7642 8230 1.283793 CAAAGTGGCCTCTTGCGTG 59.716 57.895 20.33 11.46 42.61 5.34
7643 8231 1.898574 CCAAAGTGGCCTCTTGCGT 60.899 57.895 20.33 2.61 42.61 5.24
7644 8232 2.629656 CCCAAAGTGGCCTCTTGCG 61.630 63.158 20.33 14.09 42.61 4.85
7645 8233 2.935740 GCCCAAAGTGGCCTCTTGC 61.936 63.158 20.33 15.30 46.11 4.01
7646 8234 3.369921 GCCCAAAGTGGCCTCTTG 58.630 61.111 20.33 13.67 46.11 3.02
7654 8242 2.706890 ACTATTGTACCGCCCAAAGTG 58.293 47.619 0.00 0.00 0.00 3.16
7655 8243 4.443881 GGATACTATTGTACCGCCCAAAGT 60.444 45.833 0.00 0.00 0.00 2.66
7656 8244 4.062991 GGATACTATTGTACCGCCCAAAG 58.937 47.826 0.00 0.00 0.00 2.77
7657 8245 3.181452 GGGATACTATTGTACCGCCCAAA 60.181 47.826 13.29 0.00 37.59 3.28
7658 8246 2.369532 GGGATACTATTGTACCGCCCAA 59.630 50.000 13.29 0.00 37.59 4.12
7659 8247 1.972795 GGGATACTATTGTACCGCCCA 59.027 52.381 13.29 0.00 37.59 5.36
7660 8248 1.972795 TGGGATACTATTGTACCGCCC 59.027 52.381 12.02 12.02 37.88 6.13
7661 8249 2.631545 AGTGGGATACTATTGTACCGCC 59.368 50.000 4.61 0.93 38.04 6.13
7662 8250 3.611057 CGAGTGGGATACTATTGTACCGC 60.611 52.174 0.00 0.00 40.53 5.68
7663 8251 3.817084 TCGAGTGGGATACTATTGTACCG 59.183 47.826 0.00 0.00 40.53 4.02
7664 8252 4.581824 TGTCGAGTGGGATACTATTGTACC 59.418 45.833 0.00 0.00 40.53 3.34
7665 8253 5.759963 CTGTCGAGTGGGATACTATTGTAC 58.240 45.833 0.00 0.00 40.53 2.90
7666 8254 4.277672 GCTGTCGAGTGGGATACTATTGTA 59.722 45.833 0.00 0.00 40.53 2.41
7667 8255 3.068307 GCTGTCGAGTGGGATACTATTGT 59.932 47.826 0.00 0.00 40.53 2.71
7668 8256 3.553096 GGCTGTCGAGTGGGATACTATTG 60.553 52.174 0.00 0.00 40.53 1.90
7669 8257 2.628657 GGCTGTCGAGTGGGATACTATT 59.371 50.000 0.00 0.00 40.53 1.73
7670 8258 2.240279 GGCTGTCGAGTGGGATACTAT 58.760 52.381 0.00 0.00 40.53 2.12
7671 8259 1.688772 GGCTGTCGAGTGGGATACTA 58.311 55.000 0.00 0.00 40.53 1.82
7672 8260 1.384989 CGGCTGTCGAGTGGGATACT 61.385 60.000 0.00 0.00 44.02 2.12
7673 8261 1.065928 CGGCTGTCGAGTGGGATAC 59.934 63.158 0.00 0.00 42.43 2.24
7674 8262 1.379443 ACGGCTGTCGAGTGGGATA 60.379 57.895 9.35 0.00 42.43 2.59
7675 8263 2.680352 ACGGCTGTCGAGTGGGAT 60.680 61.111 9.35 0.00 42.43 3.85
7676 8264 3.680786 CACGGCTGTCGAGTGGGA 61.681 66.667 9.35 0.00 42.43 4.37
7677 8265 3.515316 AACACGGCTGTCGAGTGGG 62.515 63.158 9.35 0.00 41.55 4.61
7678 8266 2.022129 GAACACGGCTGTCGAGTGG 61.022 63.158 9.35 0.00 41.55 4.00
7679 8267 2.365068 CGAACACGGCTGTCGAGTG 61.365 63.158 9.35 0.00 41.55 3.51
7680 8268 2.050351 CGAACACGGCTGTCGAGT 60.050 61.111 9.35 3.05 44.09 4.18
7681 8269 2.805353 CCGAACACGGCTGTCGAG 60.805 66.667 9.35 2.21 42.43 4.04
7690 8278 0.167251 GTAATTGCCCACCGAACACG 59.833 55.000 0.00 0.00 0.00 4.49
7691 8279 1.240256 TGTAATTGCCCACCGAACAC 58.760 50.000 0.00 0.00 0.00 3.32
7692 8280 2.208132 ATGTAATTGCCCACCGAACA 57.792 45.000 0.00 0.00 0.00 3.18
7693 8281 2.490115 TGAATGTAATTGCCCACCGAAC 59.510 45.455 0.00 0.00 36.07 3.95
7694 8282 2.796557 TGAATGTAATTGCCCACCGAA 58.203 42.857 0.00 0.00 36.07 4.30
7695 8283 2.498644 TGAATGTAATTGCCCACCGA 57.501 45.000 0.00 0.00 36.07 4.69
7696 8284 3.799281 ATTGAATGTAATTGCCCACCG 57.201 42.857 0.00 0.00 36.07 4.94
7697 8285 4.635324 CCAAATTGAATGTAATTGCCCACC 59.365 41.667 0.00 0.00 36.07 4.61
7698 8286 4.635324 CCCAAATTGAATGTAATTGCCCAC 59.365 41.667 0.00 0.00 36.07 4.61
7699 8287 4.841422 CCCAAATTGAATGTAATTGCCCA 58.159 39.130 0.00 0.00 36.07 5.36
7700 8288 3.627123 GCCCAAATTGAATGTAATTGCCC 59.373 43.478 0.00 0.00 36.07 5.36
7701 8289 4.516323 AGCCCAAATTGAATGTAATTGCC 58.484 39.130 0.00 0.00 36.07 4.52
7702 8290 6.818142 AGTTAGCCCAAATTGAATGTAATTGC 59.182 34.615 0.00 0.00 36.07 3.56
7703 8291 7.220683 CGAGTTAGCCCAAATTGAATGTAATTG 59.779 37.037 0.00 0.00 36.07 2.32
7704 8292 7.093945 ACGAGTTAGCCCAAATTGAATGTAATT 60.094 33.333 0.00 0.00 40.93 1.40
7705 8293 6.377146 ACGAGTTAGCCCAAATTGAATGTAAT 59.623 34.615 0.00 0.00 0.00 1.89
7706 8294 5.708230 ACGAGTTAGCCCAAATTGAATGTAA 59.292 36.000 0.00 0.00 0.00 2.41
7707 8295 5.123186 CACGAGTTAGCCCAAATTGAATGTA 59.877 40.000 0.00 0.00 0.00 2.29
7708 8296 4.079253 ACGAGTTAGCCCAAATTGAATGT 58.921 39.130 0.00 0.00 0.00 2.71
7709 8297 4.155826 TCACGAGTTAGCCCAAATTGAATG 59.844 41.667 0.00 0.00 0.00 2.67
7710 8298 4.331968 TCACGAGTTAGCCCAAATTGAAT 58.668 39.130 0.00 0.00 0.00 2.57
7711 8299 3.745799 TCACGAGTTAGCCCAAATTGAA 58.254 40.909 0.00 0.00 0.00 2.69
7712 8300 3.334691 CTCACGAGTTAGCCCAAATTGA 58.665 45.455 0.00 0.00 0.00 2.57
7713 8301 2.159517 GCTCACGAGTTAGCCCAAATTG 60.160 50.000 0.00 0.00 32.40 2.32
7714 8302 2.084546 GCTCACGAGTTAGCCCAAATT 58.915 47.619 0.00 0.00 32.40 1.82
7715 8303 1.739067 GCTCACGAGTTAGCCCAAAT 58.261 50.000 0.00 0.00 32.40 2.32
7716 8304 0.669318 CGCTCACGAGTTAGCCCAAA 60.669 55.000 4.10 0.00 43.93 3.28
7717 8305 1.080093 CGCTCACGAGTTAGCCCAA 60.080 57.895 4.10 0.00 43.93 4.12
7718 8306 1.974875 TCGCTCACGAGTTAGCCCA 60.975 57.895 4.10 0.00 45.12 5.36
7719 8307 2.882876 TCGCTCACGAGTTAGCCC 59.117 61.111 4.10 0.00 45.12 5.19
7728 8316 0.436150 CATGAACACTGTCGCTCACG 59.564 55.000 0.00 0.00 42.01 4.35
7729 8317 0.792640 CCATGAACACTGTCGCTCAC 59.207 55.000 0.00 0.00 0.00 3.51
7730 8318 0.392706 ACCATGAACACTGTCGCTCA 59.607 50.000 0.00 0.00 0.00 4.26
7731 8319 1.461127 GAACCATGAACACTGTCGCTC 59.539 52.381 0.00 0.00 0.00 5.03
7732 8320 1.512926 GAACCATGAACACTGTCGCT 58.487 50.000 0.00 0.00 0.00 4.93
7733 8321 0.163788 CGAACCATGAACACTGTCGC 59.836 55.000 0.00 0.00 0.00 5.19
7734 8322 1.455786 GACGAACCATGAACACTGTCG 59.544 52.381 0.00 0.00 0.00 4.35
7735 8323 2.755650 AGACGAACCATGAACACTGTC 58.244 47.619 0.00 0.00 0.00 3.51
7736 8324 2.910688 AGACGAACCATGAACACTGT 57.089 45.000 0.00 0.00 0.00 3.55
7737 8325 2.661675 CGTAGACGAACCATGAACACTG 59.338 50.000 0.00 0.00 43.02 3.66
7738 8326 2.925306 GCGTAGACGAACCATGAACACT 60.925 50.000 6.19 0.00 43.02 3.55
7739 8327 1.389106 GCGTAGACGAACCATGAACAC 59.611 52.381 6.19 0.00 43.02 3.32
7740 8328 1.705256 GCGTAGACGAACCATGAACA 58.295 50.000 6.19 0.00 43.02 3.18
7741 8329 0.638746 CGCGTAGACGAACCATGAAC 59.361 55.000 6.19 0.00 43.02 3.18
7742 8330 1.074319 GCGCGTAGACGAACCATGAA 61.074 55.000 8.43 0.00 43.02 2.57
7743 8331 1.515519 GCGCGTAGACGAACCATGA 60.516 57.895 8.43 0.00 43.02 3.07
7744 8332 1.742900 CTGCGCGTAGACGAACCATG 61.743 60.000 20.27 0.00 43.02 3.66
7745 8333 1.516386 CTGCGCGTAGACGAACCAT 60.516 57.895 20.27 0.00 43.02 3.55
7746 8334 2.126618 CTGCGCGTAGACGAACCA 60.127 61.111 20.27 0.00 43.02 3.67
7747 8335 0.454957 TAACTGCGCGTAGACGAACC 60.455 55.000 31.08 0.00 43.02 3.62
7748 8336 0.632241 GTAACTGCGCGTAGACGAAC 59.368 55.000 31.08 17.06 43.02 3.95
7749 8337 0.238025 TGTAACTGCGCGTAGACGAA 59.762 50.000 31.08 10.47 43.02 3.85
7750 8338 0.453282 GTGTAACTGCGCGTAGACGA 60.453 55.000 31.08 11.94 43.02 4.20
7751 8339 1.978697 GTGTAACTGCGCGTAGACG 59.021 57.895 31.08 5.72 43.27 4.18
7761 8349 4.455877 GGTTTTCCAGATGGAGTGTAACTG 59.544 45.833 1.13 0.00 46.36 3.16
7762 8350 4.652822 GGTTTTCCAGATGGAGTGTAACT 58.347 43.478 1.13 0.00 46.36 2.24
7763 8351 4.394729 TGGTTTTCCAGATGGAGTGTAAC 58.605 43.478 1.13 5.87 46.22 2.50
7764 8352 4.715534 TGGTTTTCCAGATGGAGTGTAA 57.284 40.909 1.13 0.00 46.22 2.41
7780 8368 4.278310 AGTTCCAGCTAAAACTGTGGTTT 58.722 39.130 11.10 0.00 46.27 3.27
7781 8369 3.898482 AGTTCCAGCTAAAACTGTGGTT 58.102 40.909 11.10 0.00 34.52 3.67
7782 8370 3.577805 AGTTCCAGCTAAAACTGTGGT 57.422 42.857 11.10 0.00 34.52 4.16
7783 8371 3.058914 CGAAGTTCCAGCTAAAACTGTGG 60.059 47.826 12.29 0.00 35.93 4.17
7784 8372 3.560068 ACGAAGTTCCAGCTAAAACTGTG 59.440 43.478 12.29 10.46 37.78 3.66
7785 8373 3.805207 ACGAAGTTCCAGCTAAAACTGT 58.195 40.909 12.29 5.86 37.78 3.55
7786 8374 5.869888 AGATACGAAGTTCCAGCTAAAACTG 59.130 40.000 12.29 5.35 37.78 3.16
7787 8375 6.038997 AGATACGAAGTTCCAGCTAAAACT 57.961 37.500 7.01 7.01 37.78 2.66
7788 8376 6.367969 TGAAGATACGAAGTTCCAGCTAAAAC 59.632 38.462 0.00 2.86 37.78 2.43
7789 8377 6.460781 TGAAGATACGAAGTTCCAGCTAAAA 58.539 36.000 0.00 0.00 37.78 1.52
7790 8378 6.032956 TGAAGATACGAAGTTCCAGCTAAA 57.967 37.500 0.00 0.00 37.78 1.85
7791 8379 5.654603 TGAAGATACGAAGTTCCAGCTAA 57.345 39.130 0.00 0.00 37.78 3.09
7792 8380 5.654603 TTGAAGATACGAAGTTCCAGCTA 57.345 39.130 0.00 0.00 37.78 3.32
7793 8381 4.537135 TTGAAGATACGAAGTTCCAGCT 57.463 40.909 0.00 0.00 37.78 4.24
7794 8382 6.903883 TTATTGAAGATACGAAGTTCCAGC 57.096 37.500 0.00 0.00 37.78 4.85
7795 8383 7.852945 GCAATTATTGAAGATACGAAGTTCCAG 59.147 37.037 9.36 0.00 37.78 3.86
7796 8384 7.552687 AGCAATTATTGAAGATACGAAGTTCCA 59.447 33.333 9.36 0.00 37.78 3.53
7797 8385 7.852945 CAGCAATTATTGAAGATACGAAGTTCC 59.147 37.037 9.36 0.00 37.78 3.62
7798 8386 7.374491 GCAGCAATTATTGAAGATACGAAGTTC 59.626 37.037 9.36 0.00 37.78 3.01
7799 8387 7.189512 GCAGCAATTATTGAAGATACGAAGTT 58.810 34.615 9.36 0.00 37.78 2.66
7801 8389 5.842843 CGCAGCAATTATTGAAGATACGAAG 59.157 40.000 9.36 0.00 0.00 3.79
7802 8390 5.293324 ACGCAGCAATTATTGAAGATACGAA 59.707 36.000 9.36 0.00 0.00 3.85
7803 8391 4.808895 ACGCAGCAATTATTGAAGATACGA 59.191 37.500 9.36 0.00 0.00 3.43
7804 8392 5.083136 ACGCAGCAATTATTGAAGATACG 57.917 39.130 9.36 5.59 0.00 3.06
7805 8393 6.065153 CGTACGCAGCAATTATTGAAGATAC 58.935 40.000 9.36 3.59 0.00 2.24
7806 8394 5.176774 CCGTACGCAGCAATTATTGAAGATA 59.823 40.000 10.49 0.00 0.00 1.98
7807 8395 4.024893 CCGTACGCAGCAATTATTGAAGAT 60.025 41.667 10.49 0.00 0.00 2.40
7808 8396 3.308595 CCGTACGCAGCAATTATTGAAGA 59.691 43.478 10.49 0.00 0.00 2.87
7809 8397 3.607439 CCGTACGCAGCAATTATTGAAG 58.393 45.455 10.49 1.14 0.00 3.02
7810 8398 2.223157 GCCGTACGCAGCAATTATTGAA 60.223 45.455 10.49 0.00 37.47 2.69
7811 8399 1.329292 GCCGTACGCAGCAATTATTGA 59.671 47.619 10.49 0.00 37.47 2.57
7812 8400 1.741993 GCCGTACGCAGCAATTATTG 58.258 50.000 10.49 0.00 37.47 1.90
7813 8401 0.303493 CGCCGTACGCAGCAATTATT 59.697 50.000 10.49 0.00 37.30 1.40
7814 8402 0.528901 TCGCCGTACGCAGCAATTAT 60.529 50.000 10.49 0.00 43.23 1.28
7815 8403 1.143373 CTCGCCGTACGCAGCAATTA 61.143 55.000 10.49 0.00 43.23 1.40
7816 8404 2.433491 TCGCCGTACGCAGCAATT 60.433 55.556 10.49 0.00 43.23 2.32
7817 8405 2.885644 CTCGCCGTACGCAGCAAT 60.886 61.111 10.49 0.00 43.23 3.56
7820 8408 4.789075 TTCCTCGCCGTACGCAGC 62.789 66.667 10.49 8.16 43.23 5.25
7821 8409 1.944676 GATTCCTCGCCGTACGCAG 60.945 63.158 10.49 5.78 43.23 5.18
7822 8410 1.096967 TAGATTCCTCGCCGTACGCA 61.097 55.000 10.49 0.00 43.23 5.24
7823 8411 0.659711 GTAGATTCCTCGCCGTACGC 60.660 60.000 10.49 4.62 43.23 4.42
7824 8412 0.942962 AGTAGATTCCTCGCCGTACG 59.057 55.000 8.69 8.69 45.62 3.67
7825 8413 1.070041 CGAGTAGATTCCTCGCCGTAC 60.070 57.143 0.00 0.00 44.42 3.67
7826 8414 1.224075 CGAGTAGATTCCTCGCCGTA 58.776 55.000 0.00 0.00 44.42 4.02
7827 8415 2.023318 CGAGTAGATTCCTCGCCGT 58.977 57.895 0.00 0.00 44.42 5.68
7828 8416 4.924924 CGAGTAGATTCCTCGCCG 57.075 61.111 0.00 0.00 44.42 6.46
7832 8420 0.389757 GCCCACCGAGTAGATTCCTC 59.610 60.000 0.00 0.00 0.00 3.71
7833 8421 0.325296 TGCCCACCGAGTAGATTCCT 60.325 55.000 0.00 0.00 0.00 3.36
7834 8422 0.759346 ATGCCCACCGAGTAGATTCC 59.241 55.000 0.00 0.00 0.00 3.01
7835 8423 1.270358 GGATGCCCACCGAGTAGATTC 60.270 57.143 0.00 0.00 0.00 2.52
7836 8424 0.759346 GGATGCCCACCGAGTAGATT 59.241 55.000 0.00 0.00 0.00 2.40
7837 8425 0.398522 TGGATGCCCACCGAGTAGAT 60.399 55.000 0.00 0.00 37.58 1.98
7838 8426 0.398522 ATGGATGCCCACCGAGTAGA 60.399 55.000 0.00 0.00 46.98 2.59
7839 8427 0.469917 AATGGATGCCCACCGAGTAG 59.530 55.000 0.00 0.00 46.98 2.57
7840 8428 0.180171 CAATGGATGCCCACCGAGTA 59.820 55.000 0.00 0.00 46.98 2.59
7841 8429 1.077501 CAATGGATGCCCACCGAGT 60.078 57.895 0.00 0.00 46.98 4.18
7842 8430 3.831883 CAATGGATGCCCACCGAG 58.168 61.111 0.00 0.00 46.98 4.63
7851 8439 2.124193 TGGCCGAGGCAATGGATG 60.124 61.111 16.65 0.00 44.11 3.51
7852 8440 2.194056 CTGGCCGAGGCAATGGAT 59.806 61.111 16.65 0.00 44.11 3.41
7853 8441 4.802051 GCTGGCCGAGGCAATGGA 62.802 66.667 16.65 0.00 44.11 3.41
7855 8443 3.515286 CTGCTGGCCGAGGCAATG 61.515 66.667 16.65 6.20 44.11 2.82
7864 8452 4.828925 GACTCCGAGCTGCTGGCC 62.829 72.222 7.01 0.00 43.05 5.36
7865 8453 4.828925 GGACTCCGAGCTGCTGGC 62.829 72.222 7.01 0.00 42.19 4.85
7876 8464 2.003301 GCAATCTTTGAGACGGACTCC 58.997 52.381 5.08 0.00 44.34 3.85
7877 8465 2.003301 GGCAATCTTTGAGACGGACTC 58.997 52.381 0.38 0.38 45.11 3.36
7878 8466 1.339151 GGGCAATCTTTGAGACGGACT 60.339 52.381 0.00 0.00 0.00 3.85
7879 8467 1.087501 GGGCAATCTTTGAGACGGAC 58.912 55.000 0.00 0.00 0.00 4.79
7880 8468 0.391130 CGGGCAATCTTTGAGACGGA 60.391 55.000 0.00 0.00 0.00 4.69
7881 8469 1.369091 CCGGGCAATCTTTGAGACGG 61.369 60.000 0.00 0.00 36.77 4.79
7882 8470 0.391130 TCCGGGCAATCTTTGAGACG 60.391 55.000 0.00 0.00 0.00 4.18
7883 8471 3.551259 TCCGGGCAATCTTTGAGAC 57.449 52.632 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.