Multiple sequence alignment - TraesCS1B01G223600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G223600 chr1B 100.000 7509 0 0 1 7509 401617269 401624777 0.000000e+00 13867.0
1 TraesCS1B01G223600 chr1B 88.465 1075 101 17 4143 5203 653230262 653231327 0.000000e+00 1277.0
2 TraesCS1B01G223600 chr1B 98.137 161 3 0 6176 6336 543806103 543805943 1.600000e-71 281.0
3 TraesCS1B01G223600 chr1B 100.000 33 0 0 5701 5733 386519907 386519939 2.260000e-05 62.1
4 TraesCS1B01G223600 chr1D 95.937 6227 149 34 1 6179 298566840 298573010 0.000000e+00 10002.0
5 TraesCS1B01G223600 chr1D 97.487 597 11 2 6330 6925 298573002 298573595 0.000000e+00 1016.0
6 TraesCS1B01G223600 chr1D 97.971 345 7 0 3607 3951 333497998 333498342 3.880000e-167 599.0
7 TraesCS1B01G223600 chr1D 91.908 346 12 8 7179 7509 298574004 298574348 3.170000e-128 470.0
8 TraesCS1B01G223600 chr1D 93.413 167 11 0 7014 7180 298573759 298573925 1.620000e-61 248.0
9 TraesCS1B01G223600 chr1D 92.500 80 6 0 1690 1769 413217231 413217310 1.710000e-21 115.0
10 TraesCS1B01G223600 chr1D 94.444 36 2 0 6955 6990 298573593 298573628 1.000000e-03 56.5
11 TraesCS1B01G223600 chr1A 96.850 1619 40 5 1980 3598 372237794 372239401 0.000000e+00 2697.0
12 TraesCS1B01G223600 chr1A 96.723 1190 30 3 809 1990 372236275 372237463 0.000000e+00 1973.0
13 TraesCS1B01G223600 chr1A 95.092 978 34 7 5200 6176 372239432 372240396 0.000000e+00 1528.0
14 TraesCS1B01G223600 chr1A 96.564 844 22 3 6341 7180 372240399 372241239 0.000000e+00 1391.0
15 TraesCS1B01G223600 chr1A 87.556 675 53 15 144 810 372235597 372236248 0.000000e+00 752.0
16 TraesCS1B01G223600 chr1A 91.765 340 21 4 7177 7509 372241314 372241653 4.100000e-127 466.0
17 TraesCS1B01G223600 chr1A 92.308 91 5 2 1680 1769 545330974 545330885 2.200000e-25 128.0
18 TraesCS1B01G223600 chr1A 96.078 51 2 0 3951 4001 372239385 372239435 4.830000e-12 84.2
19 TraesCS1B01G223600 chr1A 94.118 51 2 1 619 669 499766470 499766421 8.080000e-10 76.8
20 TraesCS1B01G223600 chr5B 88.187 1219 124 12 3998 5205 512935841 512934632 0.000000e+00 1435.0
21 TraesCS1B01G223600 chr5B 96.914 162 5 0 6175 6336 474318507 474318346 9.600000e-69 272.0
22 TraesCS1B01G223600 chr5B 89.888 89 9 0 3283 3371 643301958 643301870 1.710000e-21 115.0
23 TraesCS1B01G223600 chr5B 97.222 36 1 0 5701 5736 462886780 462886815 2.260000e-05 62.1
24 TraesCS1B01G223600 chr3B 90.556 1080 85 9 4000 5067 20557171 20556097 0.000000e+00 1413.0
25 TraesCS1B01G223600 chr3B 88.240 1216 93 27 4000 5203 561043492 561042315 0.000000e+00 1408.0
26 TraesCS1B01G223600 chr3B 86.596 1037 106 22 3998 5021 64792298 64793314 0.000000e+00 1114.0
27 TraesCS1B01G223600 chr3B 82.979 1222 151 29 4002 5206 826492559 826493740 0.000000e+00 1051.0
28 TraesCS1B01G223600 chr3B 99.390 164 1 0 6174 6337 2172553 2172716 1.580000e-76 298.0
29 TraesCS1B01G223600 chr3B 98.137 161 3 0 6176 6336 243784045 243784205 1.600000e-71 281.0
30 TraesCS1B01G223600 chr6B 87.387 1213 122 23 4000 5192 688659384 688658183 0.000000e+00 1363.0
31 TraesCS1B01G223600 chr6B 95.808 167 7 0 6170 6336 332382881 332382715 3.450000e-68 270.0
32 TraesCS1B01G223600 chr6B 95.238 168 8 0 6172 6339 527523723 527523556 4.470000e-67 267.0
33 TraesCS1B01G223600 chr6B 95.455 88 3 1 1683 1769 278674610 278674697 1.020000e-28 139.0
34 TraesCS1B01G223600 chr5D 86.949 1203 133 15 4000 5200 382293114 382294294 0.000000e+00 1330.0
35 TraesCS1B01G223600 chr5D 92.473 93 5 1 1685 1775 541806265 541806173 1.700000e-26 132.0
36 TraesCS1B01G223600 chr5D 89.583 96 8 2 1676 1769 60477065 60476970 3.680000e-23 121.0
37 TraesCS1B01G223600 chr5D 93.671 79 4 1 1685 1763 302333834 302333911 4.760000e-22 117.0
38 TraesCS1B01G223600 chr2B 86.278 1217 141 14 3998 5203 84842788 84841587 0.000000e+00 1299.0
39 TraesCS1B01G223600 chr2B 96.389 360 10 2 3596 3952 280493559 280493200 2.330000e-164 590.0
40 TraesCS1B01G223600 chr2B 98.137 161 3 0 6176 6336 650282374 650282214 1.600000e-71 281.0
41 TraesCS1B01G223600 chr2B 81.224 245 35 6 5934 6176 543512515 543512280 3.580000e-43 187.0
42 TraesCS1B01G223600 chr2B 91.667 120 9 1 6057 6176 543512237 543512119 1.680000e-36 165.0
43 TraesCS1B01G223600 chr4B 84.130 1172 147 26 4033 5181 615564854 615563699 0.000000e+00 1098.0
44 TraesCS1B01G223600 chr4B 88.073 218 19 6 6125 6336 659784420 659784204 1.250000e-62 252.0
45 TraesCS1B01G223600 chr4B 89.091 55 3 3 5681 5734 660491527 660491579 1.750000e-06 65.8
46 TraesCS1B01G223600 chr2D 98.261 345 6 0 3607 3951 402239429 402239085 8.330000e-169 604.0
47 TraesCS1B01G223600 chr2D 97.971 345 7 0 3607 3951 370058033 370058377 3.880000e-167 599.0
48 TraesCS1B01G223600 chr7D 97.977 346 7 0 3607 3952 429475523 429475868 1.080000e-167 601.0
49 TraesCS1B01G223600 chr7D 97.971 345 7 0 3607 3951 554582108 554581764 3.880000e-167 599.0
50 TraesCS1B01G223600 chr7D 93.258 89 3 2 1684 1769 333692849 333692937 2.200000e-25 128.0
51 TraesCS1B01G223600 chr7D 87.719 114 7 3 3283 3389 60287465 60287352 7.910000e-25 126.0
52 TraesCS1B01G223600 chr7D 90.698 43 4 0 641 683 46796619 46796577 2.930000e-04 58.4
53 TraesCS1B01G223600 chr7D 100.000 29 0 0 3344 3372 311269465 311269437 4.000000e-03 54.7
54 TraesCS1B01G223600 chr4D 97.977 346 7 0 3607 3952 179876411 179876066 1.080000e-167 601.0
55 TraesCS1B01G223600 chr4D 93.258 89 4 2 1682 1769 10243321 10243408 6.110000e-26 130.0
56 TraesCS1B01G223600 chr4D 94.118 85 4 1 1686 1769 502014059 502014143 2.200000e-25 128.0
57 TraesCS1B01G223600 chr4D 91.667 84 6 1 1686 1768 234413566 234413483 1.710000e-21 115.0
58 TraesCS1B01G223600 chr4D 88.043 92 8 3 1686 1775 231221879 231221789 1.030000e-18 106.0
59 TraesCS1B01G223600 chr3D 95.455 374 16 1 3607 3980 526277903 526278275 5.020000e-166 595.0
60 TraesCS1B01G223600 chr3D 89.216 204 20 2 5975 6177 132924532 132924330 3.480000e-63 254.0
61 TraesCS1B01G223600 chr7B 98.137 161 3 0 6176 6336 424980075 424979915 1.600000e-71 281.0
62 TraesCS1B01G223600 chr7B 84.942 259 34 5 5921 6176 634627784 634628040 2.690000e-64 257.0
63 TraesCS1B01G223600 chr7B 92.391 92 4 3 1686 1774 13801939 13801848 2.200000e-25 128.0
64 TraesCS1B01G223600 chr7B 86.667 90 12 0 3283 3372 683516301 683516390 4.790000e-17 100.0
65 TraesCS1B01G223600 chr7B 77.483 151 26 6 391 535 469473818 469473670 4.830000e-12 84.2
66 TraesCS1B01G223600 chr6D 87.111 225 22 6 5952 6174 399036884 399037103 1.620000e-61 248.0
67 TraesCS1B01G223600 chr6D 95.455 88 3 1 1683 1769 155601958 155602045 1.020000e-28 139.0
68 TraesCS1B01G223600 chr6D 96.250 80 3 0 1690 1769 13067120 13067041 1.700000e-26 132.0
69 TraesCS1B01G223600 chr6D 94.048 84 4 1 1686 1769 458975446 458975364 7.910000e-25 126.0
70 TraesCS1B01G223600 chr6D 92.771 83 3 3 1690 1769 24823341 24823423 4.760000e-22 117.0
71 TraesCS1B01G223600 chr6D 86.239 109 11 4 6070 6176 267531436 267531330 1.710000e-21 115.0
72 TraesCS1B01G223600 chr6D 90.476 84 6 2 1683 1764 131940517 131940434 7.970000e-20 110.0
73 TraesCS1B01G223600 chr6D 91.250 80 1 2 1686 1764 459051523 459051597 3.710000e-18 104.0
74 TraesCS1B01G223600 chr6D 94.595 37 2 0 6334 6370 399037101 399037137 2.930000e-04 58.4
75 TraesCS1B01G223600 chr5A 84.082 245 30 7 5934 6176 609951665 609951902 2.110000e-55 228.0
76 TraesCS1B01G223600 chr5A 89.908 109 11 0 3264 3372 640679567 640679459 2.820000e-29 141.0
77 TraesCS1B01G223600 chr7A 87.097 186 23 1 5932 6116 669275038 669275223 7.630000e-50 209.0
78 TraesCS1B01G223600 chr7A 81.579 76 10 4 3299 3372 360613307 360613234 8.140000e-05 60.2
79 TraesCS1B01G223600 chr6A 95.455 88 3 1 1683 1769 209391338 209391425 1.020000e-28 139.0
80 TraesCS1B01G223600 chr6A 97.500 80 2 0 1690 1769 14351067 14350988 3.650000e-28 137.0
81 TraesCS1B01G223600 chr6A 100.000 36 0 0 5701 5736 39440923 39440958 4.860000e-07 67.6
82 TraesCS1B01G223600 chrUn 88.506 87 9 1 1685 1770 84439923 84439837 3.710000e-18 104.0
83 TraesCS1B01G223600 chrUn 86.458 96 7 3 1680 1769 83375641 83375546 4.790000e-17 100.0
84 TraesCS1B01G223600 chrUn 88.750 80 7 2 1681 1759 288819309 288819387 6.200000e-16 97.1
85 TraesCS1B01G223600 chrUn 97.619 42 0 1 1686 1726 97741825 97741866 3.760000e-08 71.3
86 TraesCS1B01G223600 chrUn 88.889 54 3 3 5681 5733 110464771 110464822 6.290000e-06 63.9
87 TraesCS1B01G223600 chr3A 82.883 111 14 4 411 520 579118229 579118123 2.230000e-15 95.3
88 TraesCS1B01G223600 chr3A 87.324 71 3 6 466 533 219166963 219166896 8.080000e-10 76.8
89 TraesCS1B01G223600 chr3A 95.122 41 2 0 5701 5741 507310449 507310489 1.750000e-06 65.8
90 TraesCS1B01G223600 chr4A 97.436 39 1 0 5701 5739 338747797 338747759 4.860000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G223600 chr1B 401617269 401624777 7508 False 13867.000000 13867 100.000000 1 7509 1 chr1B.!!$F2 7508
1 TraesCS1B01G223600 chr1B 653230262 653231327 1065 False 1277.000000 1277 88.465000 4143 5203 1 chr1B.!!$F3 1060
2 TraesCS1B01G223600 chr1D 298566840 298574348 7508 False 2358.500000 10002 94.637800 1 7509 5 chr1D.!!$F3 7508
3 TraesCS1B01G223600 chr1A 372235597 372241653 6056 False 1270.171429 2697 94.375429 144 7509 7 chr1A.!!$F1 7365
4 TraesCS1B01G223600 chr5B 512934632 512935841 1209 True 1435.000000 1435 88.187000 3998 5205 1 chr5B.!!$R2 1207
5 TraesCS1B01G223600 chr3B 20556097 20557171 1074 True 1413.000000 1413 90.556000 4000 5067 1 chr3B.!!$R1 1067
6 TraesCS1B01G223600 chr3B 561042315 561043492 1177 True 1408.000000 1408 88.240000 4000 5203 1 chr3B.!!$R2 1203
7 TraesCS1B01G223600 chr3B 64792298 64793314 1016 False 1114.000000 1114 86.596000 3998 5021 1 chr3B.!!$F2 1023
8 TraesCS1B01G223600 chr3B 826492559 826493740 1181 False 1051.000000 1051 82.979000 4002 5206 1 chr3B.!!$F4 1204
9 TraesCS1B01G223600 chr6B 688658183 688659384 1201 True 1363.000000 1363 87.387000 4000 5192 1 chr6B.!!$R3 1192
10 TraesCS1B01G223600 chr5D 382293114 382294294 1180 False 1330.000000 1330 86.949000 4000 5200 1 chr5D.!!$F2 1200
11 TraesCS1B01G223600 chr2B 84841587 84842788 1201 True 1299.000000 1299 86.278000 3998 5203 1 chr2B.!!$R1 1205
12 TraesCS1B01G223600 chr4B 615563699 615564854 1155 True 1098.000000 1098 84.130000 4033 5181 1 chr4B.!!$R1 1148

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
805 823 1.335142 GCTATTCAGCTCGTAGGTCGG 60.335 57.143 0.00 0.0 44.93 4.79 F
1962 2019 1.686052 GTGCAAACCCTGTCAATGGAA 59.314 47.619 0.00 0.0 0.00 3.53 F
2789 3188 1.116536 TATCGCGGGGCATCCAAGTA 61.117 55.000 6.13 0.0 34.36 2.24 F
3497 3896 1.135228 GTCGTTTTGTGGTGCAAACCT 60.135 47.619 0.00 0.0 45.70 3.50 F
3901 4300 1.972588 AGGCTATCACAACCCTCCTT 58.027 50.000 0.00 0.0 0.00 3.36 F
4801 5233 1.873591 CCTGTTTGTCCACTTCCTTCG 59.126 52.381 0.00 0.0 0.00 3.79 F
6250 6723 1.818674 ACGGAGCAAAATGGGTGAATC 59.181 47.619 0.00 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2789 3188 2.093106 CACGTCTCCAAGGTAGCTAGT 58.907 52.381 0.00 0.0 0.00 2.57 R
3732 4131 0.589223 TGGCGAGCCAACGTAAAAAG 59.411 50.000 15.24 0.0 44.12 2.27 R
4384 4806 1.671742 GCCAAGGAGAAGGACGACA 59.328 57.895 0.00 0.0 0.00 4.35 R
4787 5219 2.747686 GGGCGAAGGAAGTGGACA 59.252 61.111 0.00 0.0 0.00 4.02 R
5865 6337 5.683876 AGTCAAGTTGGCATCTGTAGTAT 57.316 39.130 10.65 0.0 0.00 2.12 R
6321 6794 1.064091 ACCTAGTACTCCCTCCGTTCC 60.064 57.143 0.00 0.0 0.00 3.62 R
7382 8089 1.079503 GCAAAAACAAACCAACGCCA 58.920 45.000 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
677 694 8.748412 TGAAATCCCGAATTATTTTGAAGATGT 58.252 29.630 0.00 0.00 0.00 3.06
805 823 1.335142 GCTATTCAGCTCGTAGGTCGG 60.335 57.143 0.00 0.00 44.93 4.79
860 906 2.159707 CCATTAAGCCGAACACAACTCG 60.160 50.000 0.00 0.00 36.06 4.18
917 963 3.044305 GCTCGCCGAGTTGCTTGT 61.044 61.111 16.50 0.00 31.39 3.16
1205 1251 4.572909 TGTTTGTGTGATCTCCATCTCTG 58.427 43.478 0.00 0.00 0.00 3.35
1209 1255 4.544683 TGTGTGATCTCCATCTCTGATCT 58.455 43.478 0.00 0.00 37.89 2.75
1711 1768 8.375493 ACACCTCTGTTCCTAAATATAAGACA 57.625 34.615 0.00 0.00 0.00 3.41
1940 1997 9.945904 AATTTACCTAAACTAGACCTGAAAGAG 57.054 33.333 0.00 0.00 34.07 2.85
1962 2019 1.686052 GTGCAAACCCTGTCAATGGAA 59.314 47.619 0.00 0.00 0.00 3.53
2016 2414 1.725641 TGTTGTTGCATCTAGGCTCG 58.274 50.000 0.00 0.00 34.04 5.03
2120 2519 8.565896 TGTCTAGTGCATGATCTAAATTGTTT 57.434 30.769 0.00 0.00 0.00 2.83
2436 2835 2.232208 GGCACTGCTGGCTTAAATTTCT 59.768 45.455 0.00 0.00 39.91 2.52
2443 2842 4.957954 TGCTGGCTTAAATTTCTCATGGAT 59.042 37.500 0.00 0.00 0.00 3.41
2483 2882 7.966246 AAACGTCCACATTAGTACATTACAA 57.034 32.000 0.00 0.00 0.00 2.41
2789 3188 1.116536 TATCGCGGGGCATCCAAGTA 61.117 55.000 6.13 0.00 34.36 2.24
2939 3338 4.651962 GGAGCTCCTATATGATACCCTTCC 59.348 50.000 26.25 0.00 0.00 3.46
3023 3422 2.194212 GGACGCTATCTCCTCCGCA 61.194 63.158 0.00 0.00 0.00 5.69
3454 3853 2.305635 TCTGGATGCAAGGAAGCTACAA 59.694 45.455 0.00 0.00 34.99 2.41
3497 3896 1.135228 GTCGTTTTGTGGTGCAAACCT 60.135 47.619 0.00 0.00 45.70 3.50
3538 3937 4.165760 CCTGGTATAGGGGGTTAAGTAGG 58.834 52.174 0.00 0.00 43.33 3.18
3729 4128 4.149598 GGTTTCATACCCAAAAGACTGGT 58.850 43.478 0.00 0.00 41.43 4.00
3732 4131 6.294342 GGTTTCATACCCAAAAGACTGGTTAC 60.294 42.308 0.00 0.00 41.43 2.50
3851 4250 5.277974 CGCTCAAATGGGTTTCATACCTATG 60.278 44.000 0.00 0.00 46.51 2.23
3901 4300 1.972588 AGGCTATCACAACCCTCCTT 58.027 50.000 0.00 0.00 0.00 3.36
4259 4681 9.287373 ACTACATTCATTACTAGTACTAGAGGC 57.713 37.037 31.93 0.00 36.97 4.70
4688 5111 4.162690 GCGGCGTGGGAGGATCTT 62.163 66.667 9.37 0.00 33.73 2.40
4728 5160 2.588877 GCGTATGCCTGTGCCGAT 60.589 61.111 0.00 0.00 36.33 4.18
4800 5232 2.230660 CCCTGTTTGTCCACTTCCTTC 58.769 52.381 0.00 0.00 0.00 3.46
4801 5233 1.873591 CCTGTTTGTCCACTTCCTTCG 59.126 52.381 0.00 0.00 0.00 3.79
5329 5801 7.427989 AAATTTGATGCCTGGAATCTGTTAT 57.572 32.000 15.71 1.74 0.00 1.89
5603 6075 4.097437 TCTGTTATATCCTTCGAAGCACGT 59.903 41.667 19.99 7.95 43.13 4.49
5685 6157 4.485875 TGGTACTCTCCTGAAGGTTACAA 58.514 43.478 0.00 0.00 36.34 2.41
5750 6222 5.221742 GGGAGTATCTGTTAAGCTTATGCCT 60.222 44.000 7.08 0.00 35.76 4.75
5903 6375 9.463443 CCAACTTGACTTAAAAACTTAATCTGG 57.537 33.333 0.00 0.00 0.00 3.86
6136 6609 3.785486 TGTGACTACATGCATGACTAGC 58.215 45.455 32.75 18.44 0.00 3.42
6177 6650 6.706716 GCATGGAGAGGAAAATTAGGTAGTAC 59.293 42.308 0.00 0.00 0.00 2.73
6178 6651 7.419172 GCATGGAGAGGAAAATTAGGTAGTACT 60.419 40.741 0.00 0.00 0.00 2.73
6179 6652 8.487028 CATGGAGAGGAAAATTAGGTAGTACTT 58.513 37.037 0.00 0.00 0.00 2.24
6180 6653 8.075761 TGGAGAGGAAAATTAGGTAGTACTTC 57.924 38.462 0.00 0.00 0.00 3.01
6181 6654 7.125356 TGGAGAGGAAAATTAGGTAGTACTTCC 59.875 40.741 10.44 10.44 0.00 3.46
6182 6655 7.345132 GGAGAGGAAAATTAGGTAGTACTTCCT 59.655 40.741 22.90 22.90 42.96 3.36
6184 6657 7.434927 AGGAAAATTAGGTAGTACTTCCTCC 57.565 40.000 22.99 16.75 37.25 4.30
6185 6658 6.097981 AGGAAAATTAGGTAGTACTTCCTCCG 59.902 42.308 22.99 0.00 37.25 4.63
6186 6659 6.127225 GGAAAATTAGGTAGTACTTCCTCCGT 60.127 42.308 22.99 8.94 35.51 4.69
6187 6660 6.864151 AAATTAGGTAGTACTTCCTCCGTT 57.136 37.500 22.99 13.72 35.51 4.44
6188 6661 6.462552 AATTAGGTAGTACTTCCTCCGTTC 57.537 41.667 22.99 0.00 35.51 3.95
6189 6662 2.732763 AGGTAGTACTTCCTCCGTTCC 58.267 52.381 14.91 0.00 0.00 3.62
6190 6663 2.311243 AGGTAGTACTTCCTCCGTTCCT 59.689 50.000 14.91 1.08 0.00 3.36
6191 6664 3.525199 AGGTAGTACTTCCTCCGTTCCTA 59.475 47.826 14.91 0.00 0.00 2.94
6192 6665 4.018050 AGGTAGTACTTCCTCCGTTCCTAA 60.018 45.833 14.91 0.00 0.00 2.69
6193 6666 4.706962 GGTAGTACTTCCTCCGTTCCTAAA 59.293 45.833 11.11 0.00 0.00 1.85
6194 6667 5.362143 GGTAGTACTTCCTCCGTTCCTAAAT 59.638 44.000 11.11 0.00 0.00 1.40
6195 6668 5.340439 AGTACTTCCTCCGTTCCTAAATG 57.660 43.478 0.00 0.00 0.00 2.32
6196 6669 4.776308 AGTACTTCCTCCGTTCCTAAATGT 59.224 41.667 0.00 0.00 0.00 2.71
6197 6670 5.954150 AGTACTTCCTCCGTTCCTAAATGTA 59.046 40.000 0.00 0.00 0.00 2.29
6198 6671 5.750352 ACTTCCTCCGTTCCTAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
6199 6672 5.731591 ACTTCCTCCGTTCCTAAATGTAAG 58.268 41.667 0.00 0.00 0.00 2.34
6200 6673 5.247792 ACTTCCTCCGTTCCTAAATGTAAGT 59.752 40.000 0.00 0.00 0.00 2.24
6201 6674 5.334724 TCCTCCGTTCCTAAATGTAAGTC 57.665 43.478 0.00 0.00 0.00 3.01
6202 6675 5.021458 TCCTCCGTTCCTAAATGTAAGTCT 58.979 41.667 0.00 0.00 0.00 3.24
6203 6676 5.482878 TCCTCCGTTCCTAAATGTAAGTCTT 59.517 40.000 0.00 0.00 0.00 3.01
6204 6677 6.013984 TCCTCCGTTCCTAAATGTAAGTCTTT 60.014 38.462 0.00 0.00 0.00 2.52
6205 6678 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
6206 6679 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
6207 6680 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
6208 6681 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
6209 6682 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
6210 6683 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
6211 6684 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
6217 6690 6.946229 TGTAAGTCTTTGTAGAGATTTCGC 57.054 37.500 0.00 0.00 29.76 4.70
6218 6691 6.688578 TGTAAGTCTTTGTAGAGATTTCGCT 58.311 36.000 0.00 0.00 29.76 4.93
6219 6692 7.823665 TGTAAGTCTTTGTAGAGATTTCGCTA 58.176 34.615 0.00 0.00 29.76 4.26
6220 6693 8.467598 TGTAAGTCTTTGTAGAGATTTCGCTAT 58.532 33.333 0.00 0.00 31.23 2.97
6221 6694 7.763172 AAGTCTTTGTAGAGATTTCGCTATG 57.237 36.000 0.00 0.00 31.23 2.23
6222 6695 6.276847 AGTCTTTGTAGAGATTTCGCTATGG 58.723 40.000 0.00 0.00 31.23 2.74
6223 6696 6.096987 AGTCTTTGTAGAGATTTCGCTATGGA 59.903 38.462 0.00 0.00 31.23 3.41
6224 6697 6.199342 GTCTTTGTAGAGATTTCGCTATGGAC 59.801 42.308 0.00 0.00 31.23 4.02
6225 6698 5.854010 TTGTAGAGATTTCGCTATGGACT 57.146 39.130 0.00 0.00 31.23 3.85
6226 6699 6.954487 TTGTAGAGATTTCGCTATGGACTA 57.046 37.500 0.00 0.00 31.23 2.59
6227 6700 6.315091 TGTAGAGATTTCGCTATGGACTAC 57.685 41.667 0.00 0.00 31.23 2.73
6228 6701 5.826208 TGTAGAGATTTCGCTATGGACTACA 59.174 40.000 0.00 0.00 36.46 2.74
6229 6702 6.490381 TGTAGAGATTTCGCTATGGACTACAT 59.510 38.462 0.00 0.00 43.68 2.29
6230 6703 7.664318 TGTAGAGATTTCGCTATGGACTACATA 59.336 37.037 0.00 0.00 41.03 2.29
6231 6704 6.915349 AGAGATTTCGCTATGGACTACATAC 58.085 40.000 0.00 0.00 41.03 2.39
6232 6705 5.700846 AGATTTCGCTATGGACTACATACG 58.299 41.667 0.00 0.00 41.03 3.06
6233 6706 3.909776 TTCGCTATGGACTACATACGG 57.090 47.619 0.00 0.00 41.03 4.02
6234 6707 3.130280 TCGCTATGGACTACATACGGA 57.870 47.619 0.00 0.00 41.03 4.69
6235 6708 3.072211 TCGCTATGGACTACATACGGAG 58.928 50.000 0.00 0.00 41.03 4.63
6236 6709 2.414293 CGCTATGGACTACATACGGAGC 60.414 54.545 0.00 0.00 41.03 4.70
6237 6710 2.557056 GCTATGGACTACATACGGAGCA 59.443 50.000 0.00 0.00 41.03 4.26
6238 6711 3.005472 GCTATGGACTACATACGGAGCAA 59.995 47.826 0.00 0.00 41.03 3.91
6239 6712 4.500887 GCTATGGACTACATACGGAGCAAA 60.501 45.833 0.00 0.00 41.03 3.68
6240 6713 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
6241 6714 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
6242 6715 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
6243 6716 3.560068 GGACTACATACGGAGCAAAATGG 59.440 47.826 0.00 0.00 0.00 3.16
6244 6717 3.541632 ACTACATACGGAGCAAAATGGG 58.458 45.455 0.00 0.00 0.00 4.00
6245 6718 2.507407 ACATACGGAGCAAAATGGGT 57.493 45.000 0.00 0.00 0.00 4.51
6246 6719 2.091541 ACATACGGAGCAAAATGGGTG 58.908 47.619 0.00 0.00 0.00 4.61
6247 6720 2.290641 ACATACGGAGCAAAATGGGTGA 60.291 45.455 0.00 0.00 0.00 4.02
6248 6721 2.570415 TACGGAGCAAAATGGGTGAA 57.430 45.000 0.00 0.00 0.00 3.18
6249 6722 1.923356 ACGGAGCAAAATGGGTGAAT 58.077 45.000 0.00 0.00 0.00 2.57
6250 6723 1.818674 ACGGAGCAAAATGGGTGAATC 59.181 47.619 0.00 0.00 0.00 2.52
6251 6724 2.094675 CGGAGCAAAATGGGTGAATCT 58.905 47.619 0.00 0.00 0.00 2.40
6252 6725 3.278574 CGGAGCAAAATGGGTGAATCTA 58.721 45.455 0.00 0.00 0.00 1.98
6253 6726 3.065371 CGGAGCAAAATGGGTGAATCTAC 59.935 47.826 0.00 0.00 0.00 2.59
6254 6727 4.016444 GGAGCAAAATGGGTGAATCTACA 58.984 43.478 0.00 0.00 0.00 2.74
6255 6728 4.142381 GGAGCAAAATGGGTGAATCTACAC 60.142 45.833 0.00 0.00 39.70 2.90
6256 6729 4.666512 AGCAAAATGGGTGAATCTACACT 58.333 39.130 0.00 0.00 40.22 3.55
6257 6730 4.702131 AGCAAAATGGGTGAATCTACACTC 59.298 41.667 0.00 0.00 41.16 3.51
6264 6737 4.458989 TGGGTGAATCTACACTCAAAATGC 59.541 41.667 0.00 0.00 46.35 3.56
6265 6738 4.458989 GGGTGAATCTACACTCAAAATGCA 59.541 41.667 0.00 0.00 40.56 3.96
6266 6739 5.126061 GGGTGAATCTACACTCAAAATGCAT 59.874 40.000 0.00 0.00 40.56 3.96
6267 6740 6.261118 GGTGAATCTACACTCAAAATGCATC 58.739 40.000 0.00 0.00 40.22 3.91
6268 6741 6.094603 GGTGAATCTACACTCAAAATGCATCT 59.905 38.462 0.00 0.00 40.22 2.90
6269 6742 7.280876 GGTGAATCTACACTCAAAATGCATCTA 59.719 37.037 0.00 0.00 40.22 1.98
6270 6743 8.834465 GTGAATCTACACTCAAAATGCATCTAT 58.166 33.333 0.00 0.00 37.73 1.98
6278 6751 9.224267 ACACTCAAAATGCATCTATATACATCC 57.776 33.333 0.00 0.00 0.00 3.51
6279 6752 8.385858 CACTCAAAATGCATCTATATACATCCG 58.614 37.037 0.00 0.00 0.00 4.18
6280 6753 8.097038 ACTCAAAATGCATCTATATACATCCGT 58.903 33.333 0.00 0.00 0.00 4.69
6281 6754 9.586435 CTCAAAATGCATCTATATACATCCGTA 57.414 33.333 0.00 0.00 0.00 4.02
6285 6758 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
6286 6759 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
6287 6760 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
6288 6761 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
6289 6762 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
6290 6763 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
6291 6764 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
6292 6765 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
6293 6766 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
6294 6767 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
6295 6768 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
6296 6769 3.173668 TCCGTATGTGGTTCATAGTGC 57.826 47.619 0.00 0.00 39.36 4.40
6297 6770 2.498078 TCCGTATGTGGTTCATAGTGCA 59.502 45.455 0.00 0.00 39.36 4.57
6298 6771 3.055747 TCCGTATGTGGTTCATAGTGCAA 60.056 43.478 0.00 0.00 39.36 4.08
6299 6772 3.876914 CCGTATGTGGTTCATAGTGCAAT 59.123 43.478 0.00 0.00 39.36 3.56
6300 6773 4.024893 CCGTATGTGGTTCATAGTGCAATC 60.025 45.833 0.00 0.00 39.36 2.67
6301 6774 4.811024 CGTATGTGGTTCATAGTGCAATCT 59.189 41.667 0.00 0.00 39.36 2.40
6302 6775 5.050769 CGTATGTGGTTCATAGTGCAATCTC 60.051 44.000 0.00 0.00 39.36 2.75
6303 6776 4.558226 TGTGGTTCATAGTGCAATCTCT 57.442 40.909 0.00 0.00 0.00 3.10
6304 6777 5.675684 TGTGGTTCATAGTGCAATCTCTA 57.324 39.130 0.00 0.00 0.00 2.43
6305 6778 5.419542 TGTGGTTCATAGTGCAATCTCTAC 58.580 41.667 0.00 0.00 0.00 2.59
6306 6779 5.046663 TGTGGTTCATAGTGCAATCTCTACA 60.047 40.000 0.00 0.00 0.00 2.74
6307 6780 5.874810 GTGGTTCATAGTGCAATCTCTACAA 59.125 40.000 0.00 0.00 0.00 2.41
6308 6781 6.371548 GTGGTTCATAGTGCAATCTCTACAAA 59.628 38.462 0.00 0.00 0.00 2.83
6309 6782 6.595326 TGGTTCATAGTGCAATCTCTACAAAG 59.405 38.462 0.00 0.00 0.00 2.77
6310 6783 6.818644 GGTTCATAGTGCAATCTCTACAAAGA 59.181 38.462 0.00 0.00 0.00 2.52
6311 6784 7.201565 GGTTCATAGTGCAATCTCTACAAAGAC 60.202 40.741 0.00 0.00 0.00 3.01
6312 6785 7.175347 TCATAGTGCAATCTCTACAAAGACT 57.825 36.000 0.00 0.00 0.00 3.24
6313 6786 7.615403 TCATAGTGCAATCTCTACAAAGACTT 58.385 34.615 0.00 0.00 0.00 3.01
6314 6787 8.749354 TCATAGTGCAATCTCTACAAAGACTTA 58.251 33.333 0.00 0.00 0.00 2.24
6315 6788 9.539825 CATAGTGCAATCTCTACAAAGACTTAT 57.460 33.333 0.00 0.00 0.00 1.73
6329 6802 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
6330 6803 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
6331 6804 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
6332 6805 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
6333 6806 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
6334 6807 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
6335 6808 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
6661 7134 2.418368 TCCCAGTTTGCGCATATCTT 57.582 45.000 12.75 0.00 0.00 2.40
6830 7304 6.017440 TGTTTTACTGACAATGGCAGAACTAC 60.017 38.462 24.73 14.72 36.86 2.73
6837 7314 5.358725 TGACAATGGCAGAACTACGATACTA 59.641 40.000 0.00 0.00 0.00 1.82
6850 7327 6.439599 ACTACGATACTAGTAAAGCTGCATG 58.560 40.000 6.70 0.00 0.00 4.06
6851 7328 5.263968 ACGATACTAGTAAAGCTGCATGT 57.736 39.130 6.70 0.00 0.00 3.21
6852 7329 6.387041 ACGATACTAGTAAAGCTGCATGTA 57.613 37.500 6.70 0.00 0.00 2.29
6925 7434 4.988598 AGCACGGCGTTCACAGGG 62.989 66.667 11.19 0.00 0.00 4.45
6926 7435 4.980805 GCACGGCGTTCACAGGGA 62.981 66.667 11.19 0.00 0.00 4.20
6927 7436 2.280524 CACGGCGTTCACAGGGAA 60.281 61.111 11.19 0.00 0.00 3.97
6928 7437 1.671054 CACGGCGTTCACAGGGAAT 60.671 57.895 11.19 0.00 37.93 3.01
6929 7438 0.390603 CACGGCGTTCACAGGGAATA 60.391 55.000 11.19 0.00 37.93 1.75
6930 7439 0.322322 ACGGCGTTCACAGGGAATAA 59.678 50.000 6.77 0.00 37.93 1.40
6931 7440 0.725117 CGGCGTTCACAGGGAATAAC 59.275 55.000 0.00 0.00 37.93 1.89
6932 7441 1.092348 GGCGTTCACAGGGAATAACC 58.908 55.000 0.00 0.00 37.93 2.85
6933 7442 1.612199 GGCGTTCACAGGGAATAACCA 60.612 52.381 0.00 0.00 41.20 3.67
6934 7443 2.365582 GCGTTCACAGGGAATAACCAT 58.634 47.619 0.00 0.00 41.20 3.55
6935 7444 2.752903 GCGTTCACAGGGAATAACCATT 59.247 45.455 0.00 0.00 41.20 3.16
6936 7445 3.192633 GCGTTCACAGGGAATAACCATTT 59.807 43.478 0.00 0.00 41.20 2.32
6937 7446 4.396790 GCGTTCACAGGGAATAACCATTTA 59.603 41.667 0.00 0.00 41.20 1.40
6938 7447 5.448632 GCGTTCACAGGGAATAACCATTTAG 60.449 44.000 0.00 0.00 41.20 1.85
6939 7448 5.448632 CGTTCACAGGGAATAACCATTTAGC 60.449 44.000 0.00 0.00 41.20 3.09
6940 7449 5.186256 TCACAGGGAATAACCATTTAGCA 57.814 39.130 0.00 0.00 41.20 3.49
6941 7450 5.575157 TCACAGGGAATAACCATTTAGCAA 58.425 37.500 0.00 0.00 41.20 3.91
6942 7451 6.013379 TCACAGGGAATAACCATTTAGCAAA 58.987 36.000 0.00 0.00 41.20 3.68
6943 7452 6.152661 TCACAGGGAATAACCATTTAGCAAAG 59.847 38.462 0.00 0.00 41.20 2.77
6944 7453 6.016555 ACAGGGAATAACCATTTAGCAAAGT 58.983 36.000 0.00 0.00 41.20 2.66
6945 7454 6.496911 ACAGGGAATAACCATTTAGCAAAGTT 59.503 34.615 0.00 0.00 41.20 2.66
6946 7455 6.813152 CAGGGAATAACCATTTAGCAAAGTTG 59.187 38.462 0.00 0.00 41.20 3.16
6947 7456 6.070824 AGGGAATAACCATTTAGCAAAGTTGG 60.071 38.462 0.00 0.00 41.20 3.77
6948 7457 6.071051 GGGAATAACCATTTAGCAAAGTTGGA 60.071 38.462 7.71 0.00 41.20 3.53
6949 7458 7.382898 GGAATAACCATTTAGCAAAGTTGGAA 58.617 34.615 7.71 0.00 38.79 3.53
6950 7459 7.330946 GGAATAACCATTTAGCAAAGTTGGAAC 59.669 37.037 7.71 0.00 38.79 3.62
6951 7460 5.869649 AACCATTTAGCAAAGTTGGAACT 57.130 34.783 7.71 0.00 42.04 3.01
6952 7461 5.200368 ACCATTTAGCAAAGTTGGAACTG 57.800 39.130 7.71 0.00 39.66 3.16
6953 7462 4.892934 ACCATTTAGCAAAGTTGGAACTGA 59.107 37.500 7.71 0.00 39.66 3.41
6954 7463 5.362430 ACCATTTAGCAAAGTTGGAACTGAA 59.638 36.000 7.71 0.00 39.66 3.02
6955 7464 5.922544 CCATTTAGCAAAGTTGGAACTGAAG 59.077 40.000 0.00 0.00 39.66 3.02
6956 7465 5.514274 TTTAGCAAAGTTGGAACTGAAGG 57.486 39.130 0.00 0.00 39.66 3.46
6991 7500 2.222729 GCACCGAACATGTCATTACGTC 60.223 50.000 0.00 0.00 0.00 4.34
7004 7513 0.248990 TTACGTCACCACACGACACC 60.249 55.000 0.00 0.00 42.69 4.16
7036 7652 6.628185 AGACTTAACATTAACGGACCAGTAG 58.372 40.000 0.00 0.00 0.00 2.57
7102 7718 5.212194 ACTAGCAAGCAAATTAACAACGTG 58.788 37.500 0.00 0.00 0.00 4.49
7109 7725 3.122780 GCAAATTAACAACGTGCCATTCC 59.877 43.478 0.00 0.00 0.00 3.01
7339 8034 2.338620 CTTCAGTGCGTCCACCGA 59.661 61.111 0.00 0.00 43.09 4.69
7397 8104 3.058115 GCTTGGCGTTGGTTTGTTT 57.942 47.368 0.00 0.00 0.00 2.83
7469 8179 1.965754 CTAGAGCCAGGGTGGACAGC 61.966 65.000 0.00 0.00 40.96 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.705519 CGCAGGCGGCCTTGTTTG 62.706 66.667 21.26 10.02 40.31 2.93
60 61 4.753662 CTGGAGTCGGGGTCGGGA 62.754 72.222 0.00 0.00 36.95 5.14
64 65 3.450115 CGGACTGGAGTCGGGGTC 61.450 72.222 6.48 0.00 45.65 4.46
159 160 3.353689 ATACCCCAGCTCCAGCCCT 62.354 63.158 0.00 0.00 43.38 5.19
255 256 9.635520 TCAAACCAAAAAGTGTTCGTAAATTTA 57.364 25.926 0.00 0.00 0.00 1.40
303 304 5.236263 GCGAATTTGAAACTTTGTTCCCATT 59.764 36.000 0.00 0.00 0.00 3.16
488 492 7.903995 AAATGTTCGCATATTCCAAAAATGT 57.096 28.000 0.00 0.00 36.70 2.71
492 496 7.953158 TGAAAAATGTTCGCATATTCCAAAA 57.047 28.000 0.00 0.00 36.70 2.44
533 538 7.962918 GGAAATCATAAAATATTCGTGGATCCG 59.037 37.037 7.39 0.00 0.00 4.18
534 539 8.244113 GGGAAATCATAAAATATTCGTGGATCC 58.756 37.037 4.20 4.20 0.00 3.36
535 540 8.792633 TGGGAAATCATAAAATATTCGTGGATC 58.207 33.333 0.00 0.00 0.00 3.36
675 692 9.649167 TTTTTCCTTTCGGTATTTGTTTTTACA 57.351 25.926 0.00 0.00 0.00 2.41
677 694 9.649167 TGTTTTTCCTTTCGGTATTTGTTTTTA 57.351 25.926 0.00 0.00 0.00 1.52
795 813 1.830279 ATGAGTTCACCGACCTACGA 58.170 50.000 0.00 0.00 45.77 3.43
860 906 1.029681 GGGTTGTGGTCCAGACAAAC 58.970 55.000 2.28 2.28 39.82 2.93
1345 1392 4.188511 GTAGGGAGGGGGAGGGGG 62.189 77.778 0.00 0.00 0.00 5.40
2016 2414 5.364157 ACAGTACAAGAATCCTCCCATCTAC 59.636 44.000 0.00 0.00 0.00 2.59
2436 2835 6.813293 TTCCTAAAGTGAGATCATCCATGA 57.187 37.500 0.00 0.00 41.70 3.07
2443 2842 5.221561 TGGACGTTTTCCTAAAGTGAGATCA 60.222 40.000 0.00 0.00 46.10 2.92
2483 2882 3.944015 GAGCACAGCCAATAGTTTGAGAT 59.056 43.478 0.00 0.00 34.60 2.75
2789 3188 2.093106 CACGTCTCCAAGGTAGCTAGT 58.907 52.381 0.00 0.00 0.00 2.57
2939 3338 4.068599 GGTTCTTTCTTCCAGAAGGTCAG 58.931 47.826 7.53 2.26 35.37 3.51
3023 3422 1.678970 GACAAAGAATGGCGGGGCT 60.679 57.895 0.00 0.00 0.00 5.19
3279 3678 0.887387 GGTTGGTGCTCGCCTTAACA 60.887 55.000 0.86 0.00 0.00 2.41
3497 3896 2.101783 GGATTGGTGATGACATGGCAA 58.898 47.619 4.70 0.00 0.00 4.52
3538 3937 3.204526 CACCTGATGAAGAATCTGAGGC 58.795 50.000 0.00 0.00 36.58 4.70
3716 4115 6.183360 ACGTAAAAAGTAACCAGTCTTTTGGG 60.183 38.462 0.00 0.00 41.17 4.12
3729 4128 2.223845 GGCGAGCCAACGTAAAAAGTAA 59.776 45.455 9.58 0.00 35.81 2.24
3732 4131 0.589223 TGGCGAGCCAACGTAAAAAG 59.411 50.000 15.24 0.00 44.12 2.27
3851 4250 3.049708 ACGTAAAAACTAGCCAGTCCC 57.950 47.619 0.00 0.00 32.29 4.46
3884 4283 2.789409 ACAAGGAGGGTTGTGATAGC 57.211 50.000 0.00 0.00 39.25 2.97
3901 4300 2.437002 CCCAAGCCCGGGTAAACA 59.563 61.111 24.63 0.00 41.83 2.83
3986 4385 5.065914 AGAGATGCTCTAACTGCTCTCTAG 58.934 45.833 12.41 0.00 39.28 2.43
4139 4541 1.861542 CGGTTGCAATTTCTCCCGCA 61.862 55.000 10.48 0.00 0.00 5.69
4243 4657 3.434167 CCCCACGCCTCTAGTACTAGTAA 60.434 52.174 25.58 9.94 34.84 2.24
4289 4711 4.429212 CCACCGCGTCGTCCATGA 62.429 66.667 4.92 0.00 0.00 3.07
4380 4802 2.224305 CCAAGGAGAAGGACGACAAGTT 60.224 50.000 0.00 0.00 0.00 2.66
4384 4806 1.671742 GCCAAGGAGAAGGACGACA 59.328 57.895 0.00 0.00 0.00 4.35
4473 4896 4.441695 CAGCTTGCGCGAGGAGGA 62.442 66.667 25.74 0.00 42.32 3.71
4787 5219 2.747686 GGGCGAAGGAAGTGGACA 59.252 61.111 0.00 0.00 0.00 4.02
5865 6337 5.683876 AGTCAAGTTGGCATCTGTAGTAT 57.316 39.130 10.65 0.00 0.00 2.12
5903 6375 3.988379 TTCAGGTCTGCAATCACAAAC 57.012 42.857 0.00 0.00 0.00 2.93
6177 6650 5.731591 ACTTACATTTAGGAACGGAGGAAG 58.268 41.667 0.00 0.00 0.00 3.46
6178 6651 5.482878 AGACTTACATTTAGGAACGGAGGAA 59.517 40.000 0.00 0.00 0.00 3.36
6179 6652 5.021458 AGACTTACATTTAGGAACGGAGGA 58.979 41.667 0.00 0.00 0.00 3.71
6180 6653 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
6181 6654 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
6182 6655 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
6183 6656 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
6184 6657 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
6185 6658 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
6191 6664 8.443937 GCGAAATCTCTACAAAGACTTACATTT 58.556 33.333 0.00 0.00 0.00 2.32
6192 6665 7.819900 AGCGAAATCTCTACAAAGACTTACATT 59.180 33.333 0.00 0.00 0.00 2.71
6193 6666 7.324178 AGCGAAATCTCTACAAAGACTTACAT 58.676 34.615 0.00 0.00 0.00 2.29
6194 6667 6.688578 AGCGAAATCTCTACAAAGACTTACA 58.311 36.000 0.00 0.00 0.00 2.41
6195 6668 8.747666 CATAGCGAAATCTCTACAAAGACTTAC 58.252 37.037 0.00 0.00 0.00 2.34
6196 6669 7.921214 CCATAGCGAAATCTCTACAAAGACTTA 59.079 37.037 0.00 0.00 0.00 2.24
6197 6670 6.758886 CCATAGCGAAATCTCTACAAAGACTT 59.241 38.462 0.00 0.00 0.00 3.01
6198 6671 6.096987 TCCATAGCGAAATCTCTACAAAGACT 59.903 38.462 0.00 0.00 0.00 3.24
6199 6672 6.199342 GTCCATAGCGAAATCTCTACAAAGAC 59.801 42.308 0.00 0.00 0.00 3.01
6200 6673 6.096987 AGTCCATAGCGAAATCTCTACAAAGA 59.903 38.462 0.00 0.00 0.00 2.52
6201 6674 6.276847 AGTCCATAGCGAAATCTCTACAAAG 58.723 40.000 0.00 0.00 0.00 2.77
6202 6675 6.222038 AGTCCATAGCGAAATCTCTACAAA 57.778 37.500 0.00 0.00 0.00 2.83
6203 6676 5.854010 AGTCCATAGCGAAATCTCTACAA 57.146 39.130 0.00 0.00 0.00 2.41
6204 6677 5.826208 TGTAGTCCATAGCGAAATCTCTACA 59.174 40.000 0.00 0.00 34.82 2.74
6205 6678 6.315091 TGTAGTCCATAGCGAAATCTCTAC 57.685 41.667 0.00 0.00 0.00 2.59
6206 6679 7.148457 CGTATGTAGTCCATAGCGAAATCTCTA 60.148 40.741 0.00 0.00 36.71 2.43
6207 6680 6.348622 CGTATGTAGTCCATAGCGAAATCTCT 60.349 42.308 0.00 0.00 36.71 3.10
6208 6681 5.795939 CGTATGTAGTCCATAGCGAAATCTC 59.204 44.000 0.00 0.00 36.71 2.75
6209 6682 5.335740 CCGTATGTAGTCCATAGCGAAATCT 60.336 44.000 0.00 0.00 36.71 2.40
6210 6683 4.857588 CCGTATGTAGTCCATAGCGAAATC 59.142 45.833 0.00 0.00 36.71 2.17
6211 6684 4.521639 TCCGTATGTAGTCCATAGCGAAAT 59.478 41.667 0.00 0.00 36.71 2.17
6212 6685 3.884693 TCCGTATGTAGTCCATAGCGAAA 59.115 43.478 0.00 0.00 36.71 3.46
6213 6686 3.479489 TCCGTATGTAGTCCATAGCGAA 58.521 45.455 0.00 0.00 36.71 4.70
6214 6687 3.072211 CTCCGTATGTAGTCCATAGCGA 58.928 50.000 0.00 0.00 36.71 4.93
6215 6688 2.414293 GCTCCGTATGTAGTCCATAGCG 60.414 54.545 0.00 0.00 36.71 4.26
6216 6689 2.557056 TGCTCCGTATGTAGTCCATAGC 59.443 50.000 0.00 0.00 36.71 2.97
6217 6690 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
6218 6691 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
6219 6692 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
6220 6693 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
6221 6694 3.560068 CCATTTTGCTCCGTATGTAGTCC 59.440 47.826 0.00 0.00 0.00 3.85
6222 6695 3.560068 CCCATTTTGCTCCGTATGTAGTC 59.440 47.826 0.00 0.00 0.00 2.59
6223 6696 3.054655 ACCCATTTTGCTCCGTATGTAGT 60.055 43.478 0.00 0.00 0.00 2.73
6224 6697 3.312421 CACCCATTTTGCTCCGTATGTAG 59.688 47.826 0.00 0.00 0.00 2.74
6225 6698 3.055021 TCACCCATTTTGCTCCGTATGTA 60.055 43.478 0.00 0.00 0.00 2.29
6226 6699 2.091541 CACCCATTTTGCTCCGTATGT 58.908 47.619 0.00 0.00 0.00 2.29
6227 6700 2.364632 TCACCCATTTTGCTCCGTATG 58.635 47.619 0.00 0.00 0.00 2.39
6228 6701 2.799126 TCACCCATTTTGCTCCGTAT 57.201 45.000 0.00 0.00 0.00 3.06
6229 6702 2.570415 TTCACCCATTTTGCTCCGTA 57.430 45.000 0.00 0.00 0.00 4.02
6230 6703 1.818674 GATTCACCCATTTTGCTCCGT 59.181 47.619 0.00 0.00 0.00 4.69
6231 6704 2.094675 AGATTCACCCATTTTGCTCCG 58.905 47.619 0.00 0.00 0.00 4.63
6232 6705 4.016444 TGTAGATTCACCCATTTTGCTCC 58.984 43.478 0.00 0.00 0.00 4.70
6233 6706 4.702131 AGTGTAGATTCACCCATTTTGCTC 59.298 41.667 0.00 0.00 38.91 4.26
6234 6707 4.666512 AGTGTAGATTCACCCATTTTGCT 58.333 39.130 0.00 0.00 38.91 3.91
6235 6708 4.458989 TGAGTGTAGATTCACCCATTTTGC 59.541 41.667 0.00 0.00 38.91 3.68
6236 6709 6.573664 TTGAGTGTAGATTCACCCATTTTG 57.426 37.500 0.00 0.00 38.91 2.44
6237 6710 7.595819 TTTTGAGTGTAGATTCACCCATTTT 57.404 32.000 0.00 0.00 38.91 1.82
6238 6711 7.605449 CATTTTGAGTGTAGATTCACCCATTT 58.395 34.615 0.00 0.00 38.91 2.32
6239 6712 6.350445 GCATTTTGAGTGTAGATTCACCCATT 60.350 38.462 0.00 0.00 38.91 3.16
6240 6713 5.126061 GCATTTTGAGTGTAGATTCACCCAT 59.874 40.000 0.00 0.00 38.91 4.00
6241 6714 4.458989 GCATTTTGAGTGTAGATTCACCCA 59.541 41.667 0.00 0.00 38.91 4.51
6242 6715 4.458989 TGCATTTTGAGTGTAGATTCACCC 59.541 41.667 0.00 0.00 38.91 4.61
6243 6716 5.627499 TGCATTTTGAGTGTAGATTCACC 57.373 39.130 0.00 0.00 38.91 4.02
6244 6717 7.081526 AGATGCATTTTGAGTGTAGATTCAC 57.918 36.000 0.00 0.00 38.46 3.18
6245 6718 8.969260 ATAGATGCATTTTGAGTGTAGATTCA 57.031 30.769 0.00 0.00 0.00 2.57
6252 6725 9.224267 GGATGTATATAGATGCATTTTGAGTGT 57.776 33.333 0.00 0.00 38.38 3.55
6253 6726 8.385858 CGGATGTATATAGATGCATTTTGAGTG 58.614 37.037 11.19 0.00 38.38 3.51
6254 6727 8.097038 ACGGATGTATATAGATGCATTTTGAGT 58.903 33.333 11.19 0.00 38.38 3.41
6255 6728 8.484641 ACGGATGTATATAGATGCATTTTGAG 57.515 34.615 11.19 0.00 38.38 3.02
6258 6731 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
6259 6732 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
6260 6733 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
6261 6734 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
6262 6735 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
6263 6736 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
6264 6737 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
6265 6738 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
6266 6739 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
6267 6740 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
6268 6741 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
6269 6742 8.251026 CACTATGAACCACATACGGATGTATAT 58.749 37.037 14.23 1.68 44.82 0.86
6270 6743 7.599171 CACTATGAACCACATACGGATGTATA 58.401 38.462 14.23 6.48 44.82 1.47
6271 6744 6.455647 CACTATGAACCACATACGGATGTAT 58.544 40.000 14.23 5.54 44.82 2.29
6272 6745 5.737922 GCACTATGAACCACATACGGATGTA 60.738 44.000 14.23 0.00 44.82 2.29
6274 6747 3.494626 GCACTATGAACCACATACGGATG 59.505 47.826 5.94 5.94 40.07 3.51
6275 6748 3.133901 TGCACTATGAACCACATACGGAT 59.866 43.478 0.00 0.00 40.07 4.18
6276 6749 2.498078 TGCACTATGAACCACATACGGA 59.502 45.455 0.00 0.00 40.07 4.69
6277 6750 2.899976 TGCACTATGAACCACATACGG 58.100 47.619 0.00 0.00 40.07 4.02
6278 6751 4.811024 AGATTGCACTATGAACCACATACG 59.189 41.667 0.00 0.00 40.07 3.06
6279 6752 6.051717 AGAGATTGCACTATGAACCACATAC 58.948 40.000 0.00 0.00 40.07 2.39
6280 6753 6.239217 AGAGATTGCACTATGAACCACATA 57.761 37.500 0.00 0.00 40.07 2.29
6281 6754 5.108187 AGAGATTGCACTATGAACCACAT 57.892 39.130 0.00 0.00 42.39 3.21
6282 6755 4.558226 AGAGATTGCACTATGAACCACA 57.442 40.909 0.00 0.00 0.00 4.17
6283 6756 5.419542 TGTAGAGATTGCACTATGAACCAC 58.580 41.667 0.00 0.00 0.00 4.16
6284 6757 5.675684 TGTAGAGATTGCACTATGAACCA 57.324 39.130 0.00 0.00 0.00 3.67
6285 6758 6.818644 TCTTTGTAGAGATTGCACTATGAACC 59.181 38.462 0.00 0.00 0.00 3.62
6286 6759 7.547370 AGTCTTTGTAGAGATTGCACTATGAAC 59.453 37.037 0.00 0.00 0.00 3.18
6287 6760 7.615403 AGTCTTTGTAGAGATTGCACTATGAA 58.385 34.615 0.00 0.00 0.00 2.57
6288 6761 7.175347 AGTCTTTGTAGAGATTGCACTATGA 57.825 36.000 0.00 0.00 0.00 2.15
6289 6762 7.840342 AAGTCTTTGTAGAGATTGCACTATG 57.160 36.000 0.00 0.00 0.00 2.23
6304 6777 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
6305 6778 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
6306 6779 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
6307 6780 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
6308 6781 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
6309 6782 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
6310 6783 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
6311 6784 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
6312 6785 7.300658 AGTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
6313 6786 6.856757 AGTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
6314 6787 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
6315 6788 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
6316 6789 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
6317 6790 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
6318 6791 3.117738 CCTAGTACTCCCTCCGTTCCTAA 60.118 52.174 0.00 0.00 0.00 2.69
6319 6792 2.441001 CCTAGTACTCCCTCCGTTCCTA 59.559 54.545 0.00 0.00 0.00 2.94
6320 6793 1.214923 CCTAGTACTCCCTCCGTTCCT 59.785 57.143 0.00 0.00 0.00 3.36
6321 6794 1.064091 ACCTAGTACTCCCTCCGTTCC 60.064 57.143 0.00 0.00 0.00 3.62
6322 6795 2.426381 CAACCTAGTACTCCCTCCGTTC 59.574 54.545 0.00 0.00 0.00 3.95
6323 6796 2.225217 ACAACCTAGTACTCCCTCCGTT 60.225 50.000 0.00 0.00 0.00 4.44
6324 6797 1.357079 ACAACCTAGTACTCCCTCCGT 59.643 52.381 0.00 0.00 0.00 4.69
6325 6798 2.140839 ACAACCTAGTACTCCCTCCG 57.859 55.000 0.00 0.00 0.00 4.63
6326 6799 2.957680 GCTACAACCTAGTACTCCCTCC 59.042 54.545 0.00 0.00 0.00 4.30
6327 6800 3.900971 AGCTACAACCTAGTACTCCCTC 58.099 50.000 0.00 0.00 0.00 4.30
6328 6801 5.666474 ATAGCTACAACCTAGTACTCCCT 57.334 43.478 0.00 0.00 0.00 4.20
6329 6802 6.728089 AAATAGCTACAACCTAGTACTCCC 57.272 41.667 0.00 0.00 0.00 4.30
6330 6803 9.129532 TCTTAAATAGCTACAACCTAGTACTCC 57.870 37.037 0.00 0.00 0.00 3.85
6689 7162 5.817296 TGATCTGAAATCAACAAGATACCCG 59.183 40.000 0.00 0.00 35.39 5.28
6800 7274 6.017440 TCTGCCATTGTCAGTAAAACAAGTAC 60.017 38.462 0.00 0.00 39.78 2.73
6830 7304 6.439599 ACTACATGCAGCTTTACTAGTATCG 58.560 40.000 2.79 0.00 0.00 2.92
6837 7314 8.424918 AGACATTATACTACATGCAGCTTTACT 58.575 33.333 0.00 0.00 0.00 2.24
6925 7434 8.088365 AGTTCCAACTTTGCTAAATGGTTATTC 58.912 33.333 10.64 2.24 35.21 1.75
6926 7435 7.872483 CAGTTCCAACTTTGCTAAATGGTTATT 59.128 33.333 10.64 0.00 37.08 1.40
6927 7436 7.232534 TCAGTTCCAACTTTGCTAAATGGTTAT 59.767 33.333 10.64 0.00 37.08 1.89
6928 7437 6.547880 TCAGTTCCAACTTTGCTAAATGGTTA 59.452 34.615 10.64 1.42 37.08 2.85
6929 7438 5.362430 TCAGTTCCAACTTTGCTAAATGGTT 59.638 36.000 10.64 0.00 37.08 3.67
6930 7439 4.892934 TCAGTTCCAACTTTGCTAAATGGT 59.107 37.500 10.64 0.00 37.08 3.55
6931 7440 5.452078 TCAGTTCCAACTTTGCTAAATGG 57.548 39.130 6.17 6.17 37.08 3.16
6932 7441 5.922544 CCTTCAGTTCCAACTTTGCTAAATG 59.077 40.000 0.00 0.00 37.08 2.32
6933 7442 5.598417 ACCTTCAGTTCCAACTTTGCTAAAT 59.402 36.000 0.00 0.00 37.08 1.40
6934 7443 4.953579 ACCTTCAGTTCCAACTTTGCTAAA 59.046 37.500 0.00 0.00 37.08 1.85
6935 7444 4.532834 ACCTTCAGTTCCAACTTTGCTAA 58.467 39.130 0.00 0.00 37.08 3.09
6936 7445 4.164843 ACCTTCAGTTCCAACTTTGCTA 57.835 40.909 0.00 0.00 37.08 3.49
6937 7446 3.018423 ACCTTCAGTTCCAACTTTGCT 57.982 42.857 0.00 0.00 37.08 3.91
6938 7447 5.392057 GCTATACCTTCAGTTCCAACTTTGC 60.392 44.000 0.00 0.00 37.08 3.68
6939 7448 5.163854 CGCTATACCTTCAGTTCCAACTTTG 60.164 44.000 0.00 0.00 37.08 2.77
6940 7449 4.935808 CGCTATACCTTCAGTTCCAACTTT 59.064 41.667 0.00 0.00 37.08 2.66
6941 7450 4.504858 CGCTATACCTTCAGTTCCAACTT 58.495 43.478 0.00 0.00 37.08 2.66
6942 7451 3.679083 GCGCTATACCTTCAGTTCCAACT 60.679 47.826 0.00 0.00 40.60 3.16
6943 7452 2.608090 GCGCTATACCTTCAGTTCCAAC 59.392 50.000 0.00 0.00 0.00 3.77
6944 7453 2.235155 TGCGCTATACCTTCAGTTCCAA 59.765 45.455 9.73 0.00 0.00 3.53
6945 7454 1.828595 TGCGCTATACCTTCAGTTCCA 59.171 47.619 9.73 0.00 0.00 3.53
6946 7455 2.474816 CTGCGCTATACCTTCAGTTCC 58.525 52.381 9.73 0.00 0.00 3.62
6947 7456 1.861575 GCTGCGCTATACCTTCAGTTC 59.138 52.381 9.73 0.00 0.00 3.01
6948 7457 1.207089 TGCTGCGCTATACCTTCAGTT 59.793 47.619 9.73 0.00 0.00 3.16
6949 7458 0.824109 TGCTGCGCTATACCTTCAGT 59.176 50.000 9.73 0.00 0.00 3.41
6950 7459 1.863454 CTTGCTGCGCTATACCTTCAG 59.137 52.381 9.73 0.00 0.00 3.02
6951 7460 1.939974 CTTGCTGCGCTATACCTTCA 58.060 50.000 9.73 0.00 0.00 3.02
6952 7461 0.583917 GCTTGCTGCGCTATACCTTC 59.416 55.000 9.73 0.00 0.00 3.46
6953 7462 0.107703 TGCTTGCTGCGCTATACCTT 60.108 50.000 9.73 0.00 46.63 3.50
6954 7463 1.522092 TGCTTGCTGCGCTATACCT 59.478 52.632 9.73 0.00 46.63 3.08
6955 7464 4.124910 TGCTTGCTGCGCTATACC 57.875 55.556 9.73 0.00 46.63 2.73
6991 7500 1.272490 ACTATCTGGTGTCGTGTGGTG 59.728 52.381 0.00 0.00 0.00 4.17
7004 7513 9.448294 GTCCGTTAATGTTAAGTCTACTATCTG 57.552 37.037 0.00 0.00 0.00 2.90
7026 7642 2.296471 AGTTTGTCTGTCTACTGGTCCG 59.704 50.000 0.00 0.00 0.00 4.79
7036 7652 8.355806 CGCGAATTTTAATTAAGTTTGTCTGTC 58.644 33.333 0.00 0.00 0.00 3.51
7102 7718 4.465512 CACGCACGCAGGAATGGC 62.466 66.667 0.00 0.00 0.00 4.40
7171 7787 4.680237 CCGTCTGTCCTGCGGCAA 62.680 66.667 3.44 0.00 38.99 4.52
7328 8023 2.566570 TAAGTGCTCGGTGGACGCA 61.567 57.895 0.00 0.00 42.15 5.24
7339 8034 4.452733 GCGGCGGAGGTAAGTGCT 62.453 66.667 9.78 0.00 0.00 4.40
7382 8089 1.079503 GCAAAAACAAACCAACGCCA 58.920 45.000 0.00 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.