Multiple sequence alignment - TraesCS1B01G222000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G222000 chr1B 100.000 5225 0 0 1 5225 399332026 399337250 0.000000e+00 9649
1 TraesCS1B01G222000 chr1B 90.141 284 27 1 2028 2311 612222087 612222369 8.270000e-98 368
2 TraesCS1B01G222000 chr1D 96.046 4679 144 27 4 4658 297162037 297166698 0.000000e+00 7577
3 TraesCS1B01G222000 chr1D 87.319 276 33 1 4952 5225 297321060 297321335 1.090000e-81 315
4 TraesCS1B01G222000 chr1A 95.232 3943 118 16 626 4546 369694584 369698478 0.000000e+00 6176
5 TraesCS1B01G222000 chr1A 80.952 462 61 17 4 451 369693925 369694373 1.800000e-89 340
6 TraesCS1B01G222000 chr4A 89.490 314 32 1 1998 2311 521198675 521198987 3.790000e-106 396


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G222000 chr1B 399332026 399337250 5224 False 9649 9649 100.000 1 5225 1 chr1B.!!$F1 5224
1 TraesCS1B01G222000 chr1D 297162037 297166698 4661 False 7577 7577 96.046 4 4658 1 chr1D.!!$F1 4654
2 TraesCS1B01G222000 chr1A 369693925 369698478 4553 False 3258 6176 88.092 4 4546 2 chr1A.!!$F1 4542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
328 331 0.465097 GGAGGGACCGACGATCTACA 60.465 60.000 0.00 0.00 0.00 2.74 F
331 334 0.662085 GGGACCGACGATCTACAGAC 59.338 60.000 0.00 0.00 0.00 3.51 F
1247 1369 0.670854 GAGGTCAGACAAAGGGACGC 60.671 60.000 2.17 0.00 32.39 5.19 F
1306 1428 1.069765 GCGACCATGGATCCATCGT 59.930 57.895 28.10 26.02 33.90 3.73 F
2008 2130 1.302511 TCTTCCTTGTTGCCTCCGC 60.303 57.895 0.00 0.00 0.00 5.54 F
2844 2966 1.781429 CGTCTTATGAATCCAGTCGCG 59.219 52.381 0.00 0.00 0.00 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 1601 0.108424 ACTCAGCAGCGACAGATTCC 60.108 55.000 0.00 0.00 0.00 3.01 R
1893 2015 0.179078 CAGGAGCAGAGCTAGCCTTG 60.179 60.000 12.13 11.34 39.88 3.61 R
2269 2391 1.273759 TCTGCCATCTCTTGTGCTCT 58.726 50.000 0.00 0.00 0.00 4.09 R
2563 2685 2.746279 TCAGGAGGGTTTTTGCTCAA 57.254 45.000 0.00 0.00 0.00 3.02 R
3693 3815 1.213537 CTGCAAATCAAGCCCCACG 59.786 57.895 0.00 0.00 0.00 4.94 R
4740 4877 0.108585 AAGTCAACACAGGCACCGAT 59.891 50.000 0.00 0.00 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.610438 AACCAAGCCTCACCATTCAT 57.390 45.000 0.00 0.00 0.00 2.57
52 53 8.729756 TGACAAACTACATGAATTTATGTCCAG 58.270 33.333 18.18 13.67 41.31 3.86
66 67 9.467258 AATTTATGTCCAGAAAATATTGATGCG 57.533 29.630 0.00 0.00 0.00 4.73
71 72 3.374745 CAGAAAATATTGATGCGGCCAC 58.625 45.455 2.24 0.00 0.00 5.01
154 155 4.330894 CACAAACATCTATGATGCGTCACT 59.669 41.667 11.65 3.54 37.14 3.41
176 177 6.311445 CACTGATGAAGACTTTATTGTACGCT 59.689 38.462 0.00 0.00 0.00 5.07
180 181 5.716094 TGAAGACTTTATTGTACGCTGCTA 58.284 37.500 0.00 0.00 0.00 3.49
181 182 5.575606 TGAAGACTTTATTGTACGCTGCTAC 59.424 40.000 0.00 0.42 0.00 3.58
182 183 5.068234 AGACTTTATTGTACGCTGCTACA 57.932 39.130 0.00 3.13 0.00 2.74
191 192 2.813179 CGCTGCTACAATCACCGCC 61.813 63.158 0.00 0.00 0.00 6.13
296 297 2.425592 CTTGCACTCCCACACCGA 59.574 61.111 0.00 0.00 0.00 4.69
299 300 3.041940 GCACTCCCACACCGAACG 61.042 66.667 0.00 0.00 0.00 3.95
305 306 1.302192 CCCACACCGAACGACCAAT 60.302 57.895 0.00 0.00 0.00 3.16
319 322 0.546747 ACCAATGAAGGAGGGACCGA 60.547 55.000 0.00 0.00 44.74 4.69
328 331 0.465097 GGAGGGACCGACGATCTACA 60.465 60.000 0.00 0.00 0.00 2.74
331 334 0.662085 GGGACCGACGATCTACAGAC 59.338 60.000 0.00 0.00 0.00 3.51
349 352 2.683867 AGACGACGAAGGAGAGGTAATG 59.316 50.000 0.00 0.00 0.00 1.90
423 435 6.037610 GTCGATCAAGCTTATTTGAGTTGGAT 59.962 38.462 0.00 0.00 40.16 3.41
467 576 5.667466 TGAAAGTCAAGGGTTATATCGTCC 58.333 41.667 0.00 0.00 0.00 4.79
468 577 5.188163 TGAAAGTCAAGGGTTATATCGTCCA 59.812 40.000 0.00 0.00 0.00 4.02
760 880 1.938861 CAACACCCAAACTCGTCCG 59.061 57.895 0.00 0.00 0.00 4.79
761 881 1.227734 AACACCCAAACTCGTCCGG 60.228 57.895 0.00 0.00 0.00 5.14
815 936 1.529948 TCGACGAGGTTGGTGGACT 60.530 57.895 0.00 0.00 0.00 3.85
892 1013 4.765339 CCTTTTCCAAGTTTATTCCCGTCT 59.235 41.667 0.00 0.00 0.00 4.18
1247 1369 0.670854 GAGGTCAGACAAAGGGACGC 60.671 60.000 2.17 0.00 32.39 5.19
1253 1375 4.636435 ACAAAGGGACGCCGGTGG 62.636 66.667 21.14 6.53 0.00 4.61
1306 1428 1.069765 GCGACCATGGATCCATCGT 59.930 57.895 28.10 26.02 33.90 3.73
1355 1477 1.507174 GAGTAGCGCAGAGGAACGT 59.493 57.895 11.47 0.00 0.00 3.99
1468 1590 1.610363 TTTTCACAATGCGGTGGCTA 58.390 45.000 3.57 0.00 39.27 3.93
1516 1638 2.611292 GAGTGCGAGGAAATTGAGGATG 59.389 50.000 0.00 0.00 0.00 3.51
1518 1640 3.118112 AGTGCGAGGAAATTGAGGATGAT 60.118 43.478 0.00 0.00 0.00 2.45
1647 1769 2.299993 TGGCTGAACATCTCGATGAC 57.700 50.000 13.45 7.63 41.20 3.06
1695 1817 1.602311 CTGCCTGTGATAGCAATCCC 58.398 55.000 0.00 0.00 38.82 3.85
1757 1879 5.809001 AGAAGCTATGTTGGTTGATCAGAA 58.191 37.500 0.00 0.00 0.00 3.02
1810 1932 1.450312 GCTGCCCGTGATAGCAAGT 60.450 57.895 0.00 0.00 38.82 3.16
1893 2015 5.728471 TCAAACTCCTCTGATGATGAGAAC 58.272 41.667 5.58 0.00 38.03 3.01
1986 2108 2.515523 CCTGCTGGCCTTGGATCG 60.516 66.667 3.32 0.00 0.00 3.69
2008 2130 1.302511 TCTTCCTTGTTGCCTCCGC 60.303 57.895 0.00 0.00 0.00 5.54
2269 2391 5.392286 GTCGTGGTGTTTTTAACTTTGACA 58.608 37.500 0.00 0.00 0.00 3.58
2844 2966 1.781429 CGTCTTATGAATCCAGTCGCG 59.219 52.381 0.00 0.00 0.00 5.87
3553 3675 4.525996 TCATGATGTGGGTTATGAAGGTG 58.474 43.478 0.00 0.00 0.00 4.00
3573 3695 8.617290 AAGGTGTAAACGTTGAGAGATTATTT 57.383 30.769 0.00 0.00 0.00 1.40
3672 3794 3.891366 AGGTTGCAAGTTCTGTTAAGCAT 59.109 39.130 0.00 0.00 0.00 3.79
3693 3815 2.082231 GGCGAGGGTAAAACTTCTTCC 58.918 52.381 0.00 0.00 0.00 3.46
3831 3953 2.037251 TGGAGATACTTTATCAGCGGGC 59.963 50.000 0.00 0.00 37.65 6.13
3832 3954 2.613223 GGAGATACTTTATCAGCGGGCC 60.613 54.545 0.00 0.00 37.65 5.80
3918 4040 2.347490 GGGAAAGGAGACGCTGCA 59.653 61.111 0.00 0.00 0.00 4.41
4090 4212 3.446442 ACCTGATTGCCAGTCTGAATT 57.554 42.857 0.00 0.00 41.33 2.17
4186 4308 4.442893 CCCTCGTGCCTATATTCAAGAACA 60.443 45.833 0.00 0.00 0.00 3.18
4189 4311 6.161855 TCGTGCCTATATTCAAGAACATCT 57.838 37.500 0.00 0.00 0.00 2.90
4235 4357 1.043116 TCTGCCTAGTGCCTGCGTAT 61.043 55.000 1.42 0.00 40.16 3.06
4250 4372 2.135933 GCGTATGCCTGAATAGACACC 58.864 52.381 0.00 0.00 33.98 4.16
4271 4393 0.393448 GGCGGGAAGATCCTTAGGAC 59.607 60.000 1.74 0.00 36.57 3.85
4370 4493 2.614259 TGTTTTCCTGAGCTCTCTCCT 58.386 47.619 16.19 0.00 38.58 3.69
4392 4515 4.935702 TGTGAAGTGAAGCTGAATTTTGG 58.064 39.130 0.00 0.00 0.00 3.28
4496 4633 2.462456 TGCTTCTCGCATCTGAACTT 57.538 45.000 0.00 0.00 45.47 2.66
4498 4635 1.396301 GCTTCTCGCATCTGAACTTGG 59.604 52.381 0.00 0.00 38.92 3.61
4500 4637 3.329386 CTTCTCGCATCTGAACTTGGAA 58.671 45.455 0.00 0.00 0.00 3.53
4501 4638 2.688507 TCTCGCATCTGAACTTGGAAC 58.311 47.619 0.00 0.00 0.00 3.62
4502 4639 1.391485 CTCGCATCTGAACTTGGAACG 59.609 52.381 0.00 0.00 0.00 3.95
4503 4640 1.000394 TCGCATCTGAACTTGGAACGA 60.000 47.619 0.00 0.00 0.00 3.85
4504 4641 2.002586 CGCATCTGAACTTGGAACGAT 58.997 47.619 0.00 0.00 0.00 3.73
4505 4642 3.119280 TCGCATCTGAACTTGGAACGATA 60.119 43.478 0.00 0.00 0.00 2.92
4506 4643 3.804325 CGCATCTGAACTTGGAACGATAT 59.196 43.478 0.00 0.00 0.00 1.63
4546 4683 3.067742 CCTAAGCTTTGCCTCATCCATTG 59.932 47.826 3.20 0.00 0.00 2.82
4547 4684 1.481871 AGCTTTGCCTCATCCATTGG 58.518 50.000 0.00 0.00 0.00 3.16
4549 4686 1.134907 GCTTTGCCTCATCCATTGGTG 60.135 52.381 1.86 1.00 0.00 4.17
4551 4688 2.832643 TTGCCTCATCCATTGGTGAT 57.167 45.000 1.86 0.00 0.00 3.06
4553 4690 3.949586 TGCCTCATCCATTGGTGATTA 57.050 42.857 1.86 0.00 0.00 1.75
4555 4692 3.202818 TGCCTCATCCATTGGTGATTAGT 59.797 43.478 1.86 0.00 0.00 2.24
4556 4693 4.210331 GCCTCATCCATTGGTGATTAGTT 58.790 43.478 1.86 0.00 0.00 2.24
4557 4694 5.104151 TGCCTCATCCATTGGTGATTAGTTA 60.104 40.000 1.86 0.00 0.00 2.24
4581 4718 7.659652 AAGAAGAATAGACTTTGCTACACAC 57.340 36.000 0.00 0.00 0.00 3.82
4591 4728 3.769739 TTGCTACACACCACTCTCATT 57.230 42.857 0.00 0.00 0.00 2.57
4636 4773 3.541632 AGAGTTTGTTACACACCACCAG 58.458 45.455 0.00 0.00 0.00 4.00
4658 4795 4.770531 AGGGTTACAAAAAGGCCATTACTC 59.229 41.667 5.01 0.00 0.00 2.59
4659 4796 4.770531 GGGTTACAAAAAGGCCATTACTCT 59.229 41.667 5.01 0.00 0.00 3.24
4660 4797 5.245301 GGGTTACAAAAAGGCCATTACTCTT 59.755 40.000 5.01 0.00 0.00 2.85
4661 4798 6.387465 GGTTACAAAAAGGCCATTACTCTTC 58.613 40.000 5.01 0.00 0.00 2.87
4662 4799 6.208797 GGTTACAAAAAGGCCATTACTCTTCT 59.791 38.462 5.01 0.00 0.00 2.85
4663 4800 5.966742 ACAAAAAGGCCATTACTCTTCTC 57.033 39.130 5.01 0.00 0.00 2.87
4664 4801 4.767409 ACAAAAAGGCCATTACTCTTCTCC 59.233 41.667 5.01 0.00 0.00 3.71
4665 4802 4.936685 AAAAGGCCATTACTCTTCTCCT 57.063 40.909 5.01 0.00 0.00 3.69
4666 4803 3.922171 AAGGCCATTACTCTTCTCCTG 57.078 47.619 5.01 0.00 0.00 3.86
4667 4804 2.122768 AGGCCATTACTCTTCTCCTGG 58.877 52.381 5.01 0.00 0.00 4.45
4668 4805 1.475930 GGCCATTACTCTTCTCCTGGC 60.476 57.143 0.00 2.80 46.57 4.85
4669 4806 1.210478 GCCATTACTCTTCTCCTGGCA 59.790 52.381 6.50 0.00 46.54 4.92
4670 4807 2.158696 GCCATTACTCTTCTCCTGGCAT 60.159 50.000 6.50 0.00 46.54 4.40
4671 4808 3.686691 GCCATTACTCTTCTCCTGGCATT 60.687 47.826 6.50 0.00 46.54 3.56
4672 4809 4.444876 GCCATTACTCTTCTCCTGGCATTA 60.445 45.833 6.50 0.00 46.54 1.90
4673 4810 5.747248 GCCATTACTCTTCTCCTGGCATTAT 60.747 44.000 6.50 0.00 46.54 1.28
4674 4811 5.704515 CCATTACTCTTCTCCTGGCATTATG 59.295 44.000 0.00 0.00 0.00 1.90
4675 4812 5.957771 TTACTCTTCTCCTGGCATTATGT 57.042 39.130 0.00 0.00 0.00 2.29
4676 4813 4.851639 ACTCTTCTCCTGGCATTATGTT 57.148 40.909 0.00 0.00 0.00 2.71
4677 4814 5.184892 ACTCTTCTCCTGGCATTATGTTT 57.815 39.130 0.00 0.00 0.00 2.83
4678 4815 5.189180 ACTCTTCTCCTGGCATTATGTTTC 58.811 41.667 0.00 0.00 0.00 2.78
4679 4816 4.526970 TCTTCTCCTGGCATTATGTTTCC 58.473 43.478 0.00 0.00 0.00 3.13
4680 4817 4.228210 TCTTCTCCTGGCATTATGTTTCCT 59.772 41.667 0.00 0.00 0.00 3.36
4681 4818 5.428457 TCTTCTCCTGGCATTATGTTTCCTA 59.572 40.000 0.00 0.00 0.00 2.94
4682 4819 5.912149 TCTCCTGGCATTATGTTTCCTAT 57.088 39.130 0.00 0.00 0.00 2.57
4683 4820 6.266131 TCTCCTGGCATTATGTTTCCTATT 57.734 37.500 0.00 0.00 0.00 1.73
4684 4821 6.672593 TCTCCTGGCATTATGTTTCCTATTT 58.327 36.000 0.00 0.00 0.00 1.40
4685 4822 7.125391 TCTCCTGGCATTATGTTTCCTATTTT 58.875 34.615 0.00 0.00 0.00 1.82
4686 4823 7.619302 TCTCCTGGCATTATGTTTCCTATTTTT 59.381 33.333 0.00 0.00 0.00 1.94
4708 4845 2.774439 GCACCCGCAATAACCAATAG 57.226 50.000 0.00 0.00 38.36 1.73
4709 4846 2.021457 GCACCCGCAATAACCAATAGT 58.979 47.619 0.00 0.00 38.36 2.12
4710 4847 2.032924 GCACCCGCAATAACCAATAGTC 59.967 50.000 0.00 0.00 38.36 2.59
4711 4848 3.541632 CACCCGCAATAACCAATAGTCT 58.458 45.455 0.00 0.00 0.00 3.24
4712 4849 4.699637 CACCCGCAATAACCAATAGTCTA 58.300 43.478 0.00 0.00 0.00 2.59
4713 4850 4.750098 CACCCGCAATAACCAATAGTCTAG 59.250 45.833 0.00 0.00 0.00 2.43
4714 4851 3.746492 CCCGCAATAACCAATAGTCTAGC 59.254 47.826 0.00 0.00 0.00 3.42
4715 4852 4.503296 CCCGCAATAACCAATAGTCTAGCT 60.503 45.833 0.00 0.00 0.00 3.32
4716 4853 5.057149 CCGCAATAACCAATAGTCTAGCTT 58.943 41.667 0.00 0.00 0.00 3.74
4717 4854 5.177696 CCGCAATAACCAATAGTCTAGCTTC 59.822 44.000 0.00 0.00 0.00 3.86
4718 4855 5.986135 CGCAATAACCAATAGTCTAGCTTCT 59.014 40.000 0.00 0.00 0.00 2.85
4719 4856 6.074088 CGCAATAACCAATAGTCTAGCTTCTG 60.074 42.308 0.00 0.00 0.00 3.02
4720 4857 6.763610 GCAATAACCAATAGTCTAGCTTCTGT 59.236 38.462 0.00 0.00 0.00 3.41
4721 4858 7.281100 GCAATAACCAATAGTCTAGCTTCTGTT 59.719 37.037 0.00 0.00 0.00 3.16
4722 4859 9.167311 CAATAACCAATAGTCTAGCTTCTGTTT 57.833 33.333 0.00 0.00 0.00 2.83
4723 4860 9.740710 AATAACCAATAGTCTAGCTTCTGTTTT 57.259 29.630 0.00 0.00 0.00 2.43
4724 4861 7.440523 AACCAATAGTCTAGCTTCTGTTTTG 57.559 36.000 0.00 0.00 0.00 2.44
4725 4862 6.769512 ACCAATAGTCTAGCTTCTGTTTTGA 58.230 36.000 0.00 0.00 0.00 2.69
4726 4863 7.398024 ACCAATAGTCTAGCTTCTGTTTTGAT 58.602 34.615 0.00 0.00 0.00 2.57
4727 4864 7.335422 ACCAATAGTCTAGCTTCTGTTTTGATG 59.665 37.037 0.00 0.00 0.00 3.07
4728 4865 7.201679 CCAATAGTCTAGCTTCTGTTTTGATGG 60.202 40.741 0.00 0.00 0.00 3.51
4729 4866 5.234466 AGTCTAGCTTCTGTTTTGATGGT 57.766 39.130 0.00 0.00 0.00 3.55
4730 4867 4.999950 AGTCTAGCTTCTGTTTTGATGGTG 59.000 41.667 0.00 0.00 0.00 4.17
4731 4868 3.753272 TCTAGCTTCTGTTTTGATGGTGC 59.247 43.478 0.00 0.00 0.00 5.01
4732 4869 1.615392 AGCTTCTGTTTTGATGGTGCC 59.385 47.619 0.00 0.00 0.00 5.01
4733 4870 1.666888 GCTTCTGTTTTGATGGTGCCG 60.667 52.381 0.00 0.00 0.00 5.69
4734 4871 1.879380 CTTCTGTTTTGATGGTGCCGA 59.121 47.619 0.00 0.00 0.00 5.54
4735 4872 1.974265 TCTGTTTTGATGGTGCCGAA 58.026 45.000 0.00 0.00 0.00 4.30
4736 4873 1.879380 TCTGTTTTGATGGTGCCGAAG 59.121 47.619 0.00 0.00 0.00 3.79
4737 4874 1.879380 CTGTTTTGATGGTGCCGAAGA 59.121 47.619 0.00 0.00 0.00 2.87
4738 4875 2.489329 CTGTTTTGATGGTGCCGAAGAT 59.511 45.455 0.00 0.00 0.00 2.40
4739 4876 2.228582 TGTTTTGATGGTGCCGAAGATG 59.771 45.455 0.00 0.00 0.00 2.90
4740 4877 2.487762 GTTTTGATGGTGCCGAAGATGA 59.512 45.455 0.00 0.00 0.00 2.92
4741 4878 2.715749 TTGATGGTGCCGAAGATGAT 57.284 45.000 0.00 0.00 0.00 2.45
4742 4879 2.245159 TGATGGTGCCGAAGATGATC 57.755 50.000 0.00 0.00 0.00 2.92
4743 4880 1.143305 GATGGTGCCGAAGATGATCG 58.857 55.000 0.00 0.00 42.37 3.69
4750 4887 2.598045 CGAAGATGATCGGTGCCTG 58.402 57.895 0.00 0.00 39.12 4.85
4751 4888 0.179100 CGAAGATGATCGGTGCCTGT 60.179 55.000 0.00 0.00 39.12 4.00
4752 4889 1.293924 GAAGATGATCGGTGCCTGTG 58.706 55.000 0.00 0.00 0.00 3.66
4753 4890 0.615331 AAGATGATCGGTGCCTGTGT 59.385 50.000 0.00 0.00 0.00 3.72
4754 4891 0.615331 AGATGATCGGTGCCTGTGTT 59.385 50.000 0.00 0.00 0.00 3.32
4755 4892 0.729116 GATGATCGGTGCCTGTGTTG 59.271 55.000 0.00 0.00 0.00 3.33
4756 4893 0.324614 ATGATCGGTGCCTGTGTTGA 59.675 50.000 0.00 0.00 0.00 3.18
4757 4894 0.602638 TGATCGGTGCCTGTGTTGAC 60.603 55.000 0.00 0.00 0.00 3.18
4758 4895 0.320771 GATCGGTGCCTGTGTTGACT 60.321 55.000 0.00 0.00 0.00 3.41
4759 4896 0.108585 ATCGGTGCCTGTGTTGACTT 59.891 50.000 0.00 0.00 0.00 3.01
4760 4897 0.813610 TCGGTGCCTGTGTTGACTTG 60.814 55.000 0.00 0.00 0.00 3.16
4761 4898 1.095228 CGGTGCCTGTGTTGACTTGT 61.095 55.000 0.00 0.00 0.00 3.16
4762 4899 0.381801 GGTGCCTGTGTTGACTTGTG 59.618 55.000 0.00 0.00 0.00 3.33
4763 4900 0.248621 GTGCCTGTGTTGACTTGTGC 60.249 55.000 0.00 0.00 0.00 4.57
4764 4901 1.360192 GCCTGTGTTGACTTGTGCC 59.640 57.895 0.00 0.00 0.00 5.01
4765 4902 1.648720 CCTGTGTTGACTTGTGCCG 59.351 57.895 0.00 0.00 0.00 5.69
4766 4903 1.648720 CTGTGTTGACTTGTGCCGG 59.351 57.895 0.00 0.00 0.00 6.13
4767 4904 0.813610 CTGTGTTGACTTGTGCCGGA 60.814 55.000 5.05 0.00 0.00 5.14
4768 4905 0.813610 TGTGTTGACTTGTGCCGGAG 60.814 55.000 5.05 0.00 0.00 4.63
4769 4906 1.891919 TGTTGACTTGTGCCGGAGC 60.892 57.895 5.05 0.00 40.48 4.70
4781 4918 2.432628 CGGAGCACACGGGAGTTC 60.433 66.667 0.00 0.00 44.67 3.01
4782 4919 2.047179 GGAGCACACGGGAGTTCC 60.047 66.667 1.68 1.68 44.67 3.62
4783 4920 2.584391 GGAGCACACGGGAGTTCCT 61.584 63.158 10.67 0.00 44.67 3.36
4784 4921 1.079750 GAGCACACGGGAGTTCCTC 60.080 63.158 0.00 0.00 44.67 3.71
4785 4922 1.534235 AGCACACGGGAGTTCCTCT 60.534 57.895 0.00 0.00 44.67 3.69
4786 4923 1.122019 AGCACACGGGAGTTCCTCTT 61.122 55.000 0.00 0.00 44.67 2.85
4787 4924 0.250338 GCACACGGGAGTTCCTCTTT 60.250 55.000 0.00 0.00 44.67 2.52
4788 4925 1.814248 GCACACGGGAGTTCCTCTTTT 60.814 52.381 0.00 0.00 44.67 2.27
4789 4926 2.143925 CACACGGGAGTTCCTCTTTTC 58.856 52.381 0.00 0.00 44.67 2.29
4790 4927 1.766496 ACACGGGAGTTCCTCTTTTCA 59.234 47.619 0.00 0.00 44.67 2.69
4791 4928 2.143925 CACGGGAGTTCCTCTTTTCAC 58.856 52.381 0.00 0.00 44.67 3.18
4792 4929 1.766496 ACGGGAGTTCCTCTTTTCACA 59.234 47.619 0.00 0.00 43.33 3.58
4793 4930 2.372172 ACGGGAGTTCCTCTTTTCACAT 59.628 45.455 0.00 0.00 43.33 3.21
4794 4931 2.744202 CGGGAGTTCCTCTTTTCACATG 59.256 50.000 0.00 0.00 35.95 3.21
4795 4932 3.557054 CGGGAGTTCCTCTTTTCACATGA 60.557 47.826 0.00 0.00 35.95 3.07
4796 4933 4.593956 GGGAGTTCCTCTTTTCACATGAT 58.406 43.478 0.00 0.00 35.95 2.45
4797 4934 4.637977 GGGAGTTCCTCTTTTCACATGATC 59.362 45.833 0.00 0.00 35.95 2.92
4798 4935 4.637977 GGAGTTCCTCTTTTCACATGATCC 59.362 45.833 0.00 0.00 0.00 3.36
4799 4936 5.246981 AGTTCCTCTTTTCACATGATCCA 57.753 39.130 0.00 0.00 0.00 3.41
4800 4937 5.634118 AGTTCCTCTTTTCACATGATCCAA 58.366 37.500 0.00 0.00 0.00 3.53
4801 4938 5.474876 AGTTCCTCTTTTCACATGATCCAAC 59.525 40.000 0.00 0.00 0.00 3.77
4802 4939 5.246981 TCCTCTTTTCACATGATCCAACT 57.753 39.130 0.00 0.00 0.00 3.16
4803 4940 6.373005 TCCTCTTTTCACATGATCCAACTA 57.627 37.500 0.00 0.00 0.00 2.24
4804 4941 6.778821 TCCTCTTTTCACATGATCCAACTAA 58.221 36.000 0.00 0.00 0.00 2.24
4805 4942 6.655003 TCCTCTTTTCACATGATCCAACTAAC 59.345 38.462 0.00 0.00 0.00 2.34
4806 4943 6.656693 CCTCTTTTCACATGATCCAACTAACT 59.343 38.462 0.00 0.00 0.00 2.24
4807 4944 7.175641 CCTCTTTTCACATGATCCAACTAACTT 59.824 37.037 0.00 0.00 0.00 2.66
4808 4945 7.874940 TCTTTTCACATGATCCAACTAACTTG 58.125 34.615 0.00 0.00 0.00 3.16
4809 4946 5.627499 TTCACATGATCCAACTAACTTGC 57.373 39.130 0.00 0.00 0.00 4.01
4810 4947 4.650734 TCACATGATCCAACTAACTTGCA 58.349 39.130 0.00 0.00 0.00 4.08
4811 4948 5.255687 TCACATGATCCAACTAACTTGCAT 58.744 37.500 0.00 0.00 0.00 3.96
4812 4949 6.413892 TCACATGATCCAACTAACTTGCATA 58.586 36.000 0.00 0.00 0.00 3.14
4813 4950 6.316140 TCACATGATCCAACTAACTTGCATAC 59.684 38.462 0.00 0.00 0.00 2.39
4814 4951 6.317140 CACATGATCCAACTAACTTGCATACT 59.683 38.462 0.00 0.00 0.00 2.12
4815 4952 6.317140 ACATGATCCAACTAACTTGCATACTG 59.683 38.462 0.00 0.00 0.00 2.74
4816 4953 6.048732 TGATCCAACTAACTTGCATACTGA 57.951 37.500 0.00 0.00 0.00 3.41
4817 4954 5.874810 TGATCCAACTAACTTGCATACTGAC 59.125 40.000 0.00 0.00 0.00 3.51
4818 4955 5.483685 TCCAACTAACTTGCATACTGACT 57.516 39.130 0.00 0.00 0.00 3.41
4819 4956 5.865085 TCCAACTAACTTGCATACTGACTT 58.135 37.500 0.00 0.00 0.00 3.01
4820 4957 5.700832 TCCAACTAACTTGCATACTGACTTG 59.299 40.000 0.00 0.00 0.00 3.16
4821 4958 5.470098 CCAACTAACTTGCATACTGACTTGT 59.530 40.000 0.00 0.00 0.00 3.16
4822 4959 6.365839 CAACTAACTTGCATACTGACTTGTG 58.634 40.000 0.00 0.00 0.00 3.33
4823 4960 5.611374 ACTAACTTGCATACTGACTTGTGT 58.389 37.500 0.00 0.00 0.00 3.72
4824 4961 5.696724 ACTAACTTGCATACTGACTTGTGTC 59.303 40.000 0.00 0.00 43.20 3.67
4825 4962 4.342862 ACTTGCATACTGACTTGTGTCT 57.657 40.909 0.00 0.00 43.29 3.41
4826 4963 4.708177 ACTTGCATACTGACTTGTGTCTT 58.292 39.130 0.00 0.00 43.29 3.01
4827 4964 5.126067 ACTTGCATACTGACTTGTGTCTTT 58.874 37.500 0.00 0.00 43.29 2.52
4828 4965 5.590259 ACTTGCATACTGACTTGTGTCTTTT 59.410 36.000 0.00 0.00 43.29 2.27
4829 4966 6.095440 ACTTGCATACTGACTTGTGTCTTTTT 59.905 34.615 0.00 0.00 43.29 1.94
4849 4986 3.594603 TTTTAAGCTCTCCGTCCTCTG 57.405 47.619 0.00 0.00 0.00 3.35
4850 4987 1.475403 TTAAGCTCTCCGTCCTCTGG 58.525 55.000 0.00 0.00 0.00 3.86
4851 4988 1.038130 TAAGCTCTCCGTCCTCTGGC 61.038 60.000 0.00 0.00 0.00 4.85
4852 4989 3.071206 GCTCTCCGTCCTCTGGCA 61.071 66.667 0.00 0.00 0.00 4.92
4853 4990 2.430610 GCTCTCCGTCCTCTGGCAT 61.431 63.158 0.00 0.00 0.00 4.40
4854 4991 1.965754 GCTCTCCGTCCTCTGGCATT 61.966 60.000 0.00 0.00 0.00 3.56
4855 4992 0.539051 CTCTCCGTCCTCTGGCATTT 59.461 55.000 0.00 0.00 0.00 2.32
4856 4993 1.757118 CTCTCCGTCCTCTGGCATTTA 59.243 52.381 0.00 0.00 0.00 1.40
4857 4994 2.366916 CTCTCCGTCCTCTGGCATTTAT 59.633 50.000 0.00 0.00 0.00 1.40
4858 4995 2.771943 TCTCCGTCCTCTGGCATTTATT 59.228 45.455 0.00 0.00 0.00 1.40
4859 4996 3.134458 CTCCGTCCTCTGGCATTTATTC 58.866 50.000 0.00 0.00 0.00 1.75
4860 4997 2.503765 TCCGTCCTCTGGCATTTATTCA 59.496 45.455 0.00 0.00 0.00 2.57
4861 4998 3.054728 TCCGTCCTCTGGCATTTATTCAA 60.055 43.478 0.00 0.00 0.00 2.69
4862 4999 3.885297 CCGTCCTCTGGCATTTATTCAAT 59.115 43.478 0.00 0.00 0.00 2.57
4863 5000 5.063204 CCGTCCTCTGGCATTTATTCAATA 58.937 41.667 0.00 0.00 0.00 1.90
4864 5001 5.530915 CCGTCCTCTGGCATTTATTCAATAA 59.469 40.000 0.00 0.00 0.00 1.40
4865 5002 6.207417 CCGTCCTCTGGCATTTATTCAATAAT 59.793 38.462 0.00 0.00 0.00 1.28
4866 5003 7.390440 CCGTCCTCTGGCATTTATTCAATAATA 59.610 37.037 0.00 0.00 0.00 0.98
4867 5004 8.446273 CGTCCTCTGGCATTTATTCAATAATAG 58.554 37.037 0.00 0.00 0.00 1.73
4868 5005 8.734386 GTCCTCTGGCATTTATTCAATAATAGG 58.266 37.037 0.00 0.00 0.00 2.57
4869 5006 7.394359 TCCTCTGGCATTTATTCAATAATAGGC 59.606 37.037 8.24 8.24 0.00 3.93
4870 5007 7.144722 TCTGGCATTTATTCAATAATAGGCG 57.855 36.000 9.77 6.49 31.57 5.52
4871 5008 6.939730 TCTGGCATTTATTCAATAATAGGCGA 59.060 34.615 9.77 7.98 31.57 5.54
4872 5009 7.446931 TCTGGCATTTATTCAATAATAGGCGAA 59.553 33.333 9.77 0.00 31.57 4.70
4873 5010 7.592938 TGGCATTTATTCAATAATAGGCGAAG 58.407 34.615 9.77 0.00 31.57 3.79
4874 5011 7.029563 GGCATTTATTCAATAATAGGCGAAGG 58.970 38.462 0.00 0.00 0.00 3.46
4887 5024 0.864455 GCGAAGGCATATCTGACTGC 59.136 55.000 5.68 5.68 41.05 4.40
4888 5025 1.807755 GCGAAGGCATATCTGACTGCA 60.808 52.381 13.92 0.00 41.05 4.41
4889 5026 2.554142 CGAAGGCATATCTGACTGCAA 58.446 47.619 13.92 0.00 41.05 4.08
4890 5027 2.938451 CGAAGGCATATCTGACTGCAAA 59.062 45.455 13.92 0.00 41.05 3.68
4891 5028 3.374988 CGAAGGCATATCTGACTGCAAAA 59.625 43.478 13.92 0.00 41.05 2.44
4892 5029 4.142622 CGAAGGCATATCTGACTGCAAAAA 60.143 41.667 13.92 0.00 41.05 1.94
4893 5030 5.449588 CGAAGGCATATCTGACTGCAAAAAT 60.450 40.000 13.92 0.00 41.05 1.82
4894 5031 6.238456 CGAAGGCATATCTGACTGCAAAAATA 60.238 38.462 13.92 0.00 41.05 1.40
4895 5032 6.630444 AGGCATATCTGACTGCAAAAATAG 57.370 37.500 13.92 0.00 40.12 1.73
4896 5033 6.125029 AGGCATATCTGACTGCAAAAATAGT 58.875 36.000 13.92 0.00 40.12 2.12
4897 5034 7.282585 AGGCATATCTGACTGCAAAAATAGTA 58.717 34.615 13.92 0.00 40.12 1.82
4898 5035 7.443575 AGGCATATCTGACTGCAAAAATAGTAG 59.556 37.037 13.92 0.00 40.12 2.57
4899 5036 7.227512 GGCATATCTGACTGCAAAAATAGTAGT 59.772 37.037 13.92 0.00 40.18 2.73
4900 5037 9.261180 GCATATCTGACTGCAAAAATAGTAGTA 57.739 33.333 8.67 0.00 38.28 1.82
4905 5042 9.856488 TCTGACTGCAAAAATAGTAGTAGTAAG 57.144 33.333 0.00 0.00 31.94 2.34
4906 5043 9.856488 CTGACTGCAAAAATAGTAGTAGTAAGA 57.144 33.333 0.00 0.00 31.94 2.10
4911 5048 9.760077 TGCAAAAATAGTAGTAGTAAGATAGCC 57.240 33.333 0.00 0.00 0.00 3.93
4912 5049 9.760077 GCAAAAATAGTAGTAGTAAGATAGCCA 57.240 33.333 0.00 0.00 0.00 4.75
4915 5052 8.653036 AAATAGTAGTAGTAAGATAGCCAGGG 57.347 38.462 0.00 0.00 0.00 4.45
4916 5053 5.926580 AGTAGTAGTAAGATAGCCAGGGA 57.073 43.478 0.00 0.00 0.00 4.20
4917 5054 6.471942 AGTAGTAGTAAGATAGCCAGGGAT 57.528 41.667 0.00 0.00 0.00 3.85
4918 5055 6.865520 AGTAGTAGTAAGATAGCCAGGGATT 58.134 40.000 0.00 0.00 0.00 3.01
4919 5056 7.997915 AGTAGTAGTAAGATAGCCAGGGATTA 58.002 38.462 0.00 0.00 0.00 1.75
4920 5057 7.889600 AGTAGTAGTAAGATAGCCAGGGATTAC 59.110 40.741 0.00 0.00 0.00 1.89
4921 5058 6.621394 AGTAGTAAGATAGCCAGGGATTACA 58.379 40.000 0.00 0.00 0.00 2.41
4922 5059 7.249715 AGTAGTAAGATAGCCAGGGATTACAT 58.750 38.462 0.00 0.00 0.00 2.29
4923 5060 6.613153 AGTAAGATAGCCAGGGATTACATC 57.387 41.667 0.00 0.00 0.00 3.06
4924 5061 6.084738 AGTAAGATAGCCAGGGATTACATCA 58.915 40.000 0.00 0.00 0.00 3.07
4925 5062 5.912149 AAGATAGCCAGGGATTACATCAA 57.088 39.130 0.00 0.00 0.00 2.57
4926 5063 6.460103 AAGATAGCCAGGGATTACATCAAT 57.540 37.500 0.00 0.00 0.00 2.57
4927 5064 5.813383 AGATAGCCAGGGATTACATCAATG 58.187 41.667 0.00 0.00 0.00 2.82
4928 5065 3.959495 AGCCAGGGATTACATCAATGT 57.041 42.857 0.70 0.70 44.48 2.71
4929 5066 4.255510 AGCCAGGGATTACATCAATGTT 57.744 40.909 0.20 0.00 41.97 2.71
4930 5067 4.210331 AGCCAGGGATTACATCAATGTTC 58.790 43.478 0.20 0.00 41.97 3.18
4931 5068 3.953612 GCCAGGGATTACATCAATGTTCA 59.046 43.478 0.20 0.00 41.97 3.18
4932 5069 4.402155 GCCAGGGATTACATCAATGTTCAA 59.598 41.667 0.20 0.00 41.97 2.69
4933 5070 5.105392 GCCAGGGATTACATCAATGTTCAAA 60.105 40.000 0.20 0.00 41.97 2.69
4934 5071 6.574073 GCCAGGGATTACATCAATGTTCAAAA 60.574 38.462 0.20 0.00 41.97 2.44
4935 5072 6.813152 CCAGGGATTACATCAATGTTCAAAAC 59.187 38.462 0.20 0.00 41.97 2.43
4936 5073 7.309990 CCAGGGATTACATCAATGTTCAAAACT 60.310 37.037 0.20 0.00 41.97 2.66
4937 5074 7.543172 CAGGGATTACATCAATGTTCAAAACTG 59.457 37.037 0.20 1.20 41.97 3.16
4938 5075 7.451255 AGGGATTACATCAATGTTCAAAACTGA 59.549 33.333 0.20 0.00 41.97 3.41
4939 5076 8.087750 GGGATTACATCAATGTTCAAAACTGAA 58.912 33.333 0.20 0.00 41.97 3.02
4940 5077 9.474920 GGATTACATCAATGTTCAAAACTGAAA 57.525 29.630 0.20 0.00 41.97 2.69
4943 5080 9.868277 TTACATCAATGTTCAAAACTGAAAAGT 57.132 25.926 0.20 0.00 41.97 2.66
4944 5081 8.776376 ACATCAATGTTCAAAACTGAAAAGTT 57.224 26.923 0.00 0.00 37.90 2.66
4945 5082 8.872845 ACATCAATGTTCAAAACTGAAAAGTTC 58.127 29.630 0.00 0.00 37.90 3.01
4946 5083 8.871862 CATCAATGTTCAAAACTGAAAAGTTCA 58.128 29.630 0.00 0.00 38.17 3.18
4947 5084 8.824159 TCAATGTTCAAAACTGAAAAGTTCAA 57.176 26.923 0.00 0.00 39.58 2.69
4948 5085 9.265901 TCAATGTTCAAAACTGAAAAGTTCAAA 57.734 25.926 0.00 0.00 39.58 2.69
4951 5088 9.657419 ATGTTCAAAACTGAAAAGTTCAAATCT 57.343 25.926 0.00 0.00 39.58 2.40
4955 5092 9.787532 TCAAAACTGAAAAGTTCAAATCTAGTG 57.212 29.630 0.00 0.00 39.58 2.74
4956 5093 8.534778 CAAAACTGAAAAGTTCAAATCTAGTGC 58.465 33.333 0.00 0.00 39.58 4.40
4957 5094 7.573968 AACTGAAAAGTTCAAATCTAGTGCT 57.426 32.000 0.00 0.00 39.58 4.40
4958 5095 7.573968 ACTGAAAAGTTCAAATCTAGTGCTT 57.426 32.000 0.00 0.00 39.58 3.91
4959 5096 7.643579 ACTGAAAAGTTCAAATCTAGTGCTTC 58.356 34.615 0.00 0.00 39.58 3.86
4960 5097 6.970484 TGAAAAGTTCAAATCTAGTGCTTCC 58.030 36.000 0.00 0.00 36.59 3.46
4961 5098 6.772716 TGAAAAGTTCAAATCTAGTGCTTCCT 59.227 34.615 0.00 0.00 36.59 3.36
4962 5099 7.285401 TGAAAAGTTCAAATCTAGTGCTTCCTT 59.715 33.333 0.00 0.00 36.59 3.36
4963 5100 8.691661 AAAAGTTCAAATCTAGTGCTTCCTTA 57.308 30.769 0.00 0.00 0.00 2.69
4964 5101 7.913674 AAGTTCAAATCTAGTGCTTCCTTAG 57.086 36.000 0.00 0.00 0.00 2.18
4975 5112 2.029838 CTTCCTTAGCAAGCCGATGT 57.970 50.000 0.00 0.00 0.00 3.06
4976 5113 1.667724 CTTCCTTAGCAAGCCGATGTG 59.332 52.381 0.00 0.00 0.00 3.21
4977 5114 0.744414 TCCTTAGCAAGCCGATGTGC 60.744 55.000 0.00 0.00 41.22 4.57
4978 5115 1.026182 CCTTAGCAAGCCGATGTGCA 61.026 55.000 6.88 0.00 43.42 4.57
4979 5116 0.376152 CTTAGCAAGCCGATGTGCAG 59.624 55.000 6.88 0.00 43.42 4.41
4980 5117 1.647545 TTAGCAAGCCGATGTGCAGC 61.648 55.000 6.88 0.00 43.42 5.25
4981 5118 4.487412 GCAAGCCGATGTGCAGCC 62.487 66.667 0.00 0.00 40.58 4.85
4982 5119 4.170062 CAAGCCGATGTGCAGCCG 62.170 66.667 0.00 0.00 0.00 5.52
4983 5120 4.393155 AAGCCGATGTGCAGCCGA 62.393 61.111 4.17 0.00 0.00 5.54
4984 5121 3.687321 AAGCCGATGTGCAGCCGAT 62.687 57.895 4.17 0.00 0.00 4.18
4985 5122 3.204827 GCCGATGTGCAGCCGATT 61.205 61.111 4.17 0.00 0.00 3.34
4986 5123 2.764314 GCCGATGTGCAGCCGATTT 61.764 57.895 4.17 0.00 0.00 2.17
4987 5124 1.436195 GCCGATGTGCAGCCGATTTA 61.436 55.000 4.17 0.00 0.00 1.40
4988 5125 0.583438 CCGATGTGCAGCCGATTTAG 59.417 55.000 4.17 0.00 0.00 1.85
4989 5126 1.570813 CGATGTGCAGCCGATTTAGA 58.429 50.000 0.00 0.00 0.00 2.10
4990 5127 1.933181 CGATGTGCAGCCGATTTAGAA 59.067 47.619 0.00 0.00 0.00 2.10
4991 5128 2.545526 CGATGTGCAGCCGATTTAGAAT 59.454 45.455 0.00 0.00 0.00 2.40
4992 5129 3.605461 CGATGTGCAGCCGATTTAGAATG 60.605 47.826 0.00 0.00 0.00 2.67
4993 5130 2.016318 TGTGCAGCCGATTTAGAATGG 58.984 47.619 0.00 0.00 0.00 3.16
4998 5135 1.949257 CCGATTTAGAATGGCGGCC 59.051 57.895 13.32 13.32 35.17 6.13
4999 5136 0.817634 CCGATTTAGAATGGCGGCCA 60.818 55.000 26.11 26.11 38.19 5.36
5000 5137 0.588252 CGATTTAGAATGGCGGCCAG 59.412 55.000 27.62 6.28 36.75 4.85
5019 5156 3.853475 CAGCAAACTGGAATTGGAATCC 58.147 45.455 0.00 0.00 40.48 3.01
5020 5157 2.833943 AGCAAACTGGAATTGGAATCCC 59.166 45.455 0.00 0.00 36.04 3.85
5021 5158 2.833943 GCAAACTGGAATTGGAATCCCT 59.166 45.455 0.00 0.00 36.04 4.20
5022 5159 3.261643 GCAAACTGGAATTGGAATCCCTT 59.738 43.478 0.00 0.00 36.04 3.95
5023 5160 4.824289 CAAACTGGAATTGGAATCCCTTG 58.176 43.478 0.00 0.00 36.04 3.61
5024 5161 3.833559 ACTGGAATTGGAATCCCTTGT 57.166 42.857 0.00 0.00 36.04 3.16
5025 5162 3.434309 ACTGGAATTGGAATCCCTTGTG 58.566 45.455 0.00 0.00 36.04 3.33
5026 5163 3.075882 ACTGGAATTGGAATCCCTTGTGA 59.924 43.478 0.00 0.00 36.04 3.58
5027 5164 3.430453 TGGAATTGGAATCCCTTGTGAC 58.570 45.455 0.00 0.00 36.04 3.67
5028 5165 3.075882 TGGAATTGGAATCCCTTGTGACT 59.924 43.478 0.00 0.00 36.04 3.41
5029 5166 4.089361 GGAATTGGAATCCCTTGTGACTT 58.911 43.478 0.00 0.00 0.00 3.01
5030 5167 4.082026 GGAATTGGAATCCCTTGTGACTTG 60.082 45.833 0.00 0.00 0.00 3.16
5031 5168 3.593442 TTGGAATCCCTTGTGACTTGT 57.407 42.857 0.00 0.00 0.00 3.16
5032 5169 2.862541 TGGAATCCCTTGTGACTTGTG 58.137 47.619 0.00 0.00 0.00 3.33
5033 5170 2.174639 TGGAATCCCTTGTGACTTGTGT 59.825 45.455 0.00 0.00 0.00 3.72
5034 5171 2.814336 GGAATCCCTTGTGACTTGTGTC 59.186 50.000 0.00 0.00 43.20 3.67
5051 5188 3.520290 TGTCAGAACACACGAGAGTTT 57.480 42.857 0.00 0.00 46.40 2.66
5052 5189 3.444916 TGTCAGAACACACGAGAGTTTC 58.555 45.455 0.00 0.00 46.40 2.78
5053 5190 3.130516 TGTCAGAACACACGAGAGTTTCT 59.869 43.478 0.00 0.00 46.40 2.52
5054 5191 3.731717 GTCAGAACACACGAGAGTTTCTC 59.268 47.826 0.00 0.00 46.40 2.87
5055 5192 3.632604 TCAGAACACACGAGAGTTTCTCT 59.367 43.478 4.73 0.00 46.40 3.10
5071 5208 8.766476 AGAGTTTCTCTCATTTTAGATGATCCA 58.234 33.333 0.00 0.00 44.98 3.41
5072 5209 9.388506 GAGTTTCTCTCATTTTAGATGATCCAA 57.611 33.333 0.00 0.00 42.34 3.53
5073 5210 9.171877 AGTTTCTCTCATTTTAGATGATCCAAC 57.828 33.333 0.00 0.00 0.00 3.77
5074 5211 8.401709 GTTTCTCTCATTTTAGATGATCCAACC 58.598 37.037 0.00 0.00 0.00 3.77
5075 5212 7.199167 TCTCTCATTTTAGATGATCCAACCA 57.801 36.000 0.00 0.00 0.00 3.67
5076 5213 7.632861 TCTCTCATTTTAGATGATCCAACCAA 58.367 34.615 0.00 0.00 0.00 3.67
5077 5214 7.554118 TCTCTCATTTTAGATGATCCAACCAAC 59.446 37.037 0.00 0.00 0.00 3.77
5078 5215 7.405292 TCTCATTTTAGATGATCCAACCAACT 58.595 34.615 0.00 0.00 0.00 3.16
5079 5216 7.890127 TCTCATTTTAGATGATCCAACCAACTT 59.110 33.333 0.00 0.00 0.00 2.66
5080 5217 7.829725 TCATTTTAGATGATCCAACCAACTTG 58.170 34.615 0.00 0.00 0.00 3.16
5081 5218 5.643379 TTTAGATGATCCAACCAACTTGC 57.357 39.130 0.00 0.00 0.00 4.01
5082 5219 3.159213 AGATGATCCAACCAACTTGCA 57.841 42.857 0.00 0.00 0.00 4.08
5083 5220 3.705051 AGATGATCCAACCAACTTGCAT 58.295 40.909 0.00 0.00 0.00 3.96
5084 5221 3.446161 AGATGATCCAACCAACTTGCATG 59.554 43.478 0.00 0.00 0.00 4.06
5085 5222 1.894466 TGATCCAACCAACTTGCATGG 59.106 47.619 3.18 3.18 43.84 3.66
5091 5228 3.040965 CCAACTTGCATGGTGAGGT 57.959 52.632 18.62 0.00 33.08 3.85
5092 5229 2.198827 CCAACTTGCATGGTGAGGTA 57.801 50.000 18.62 0.00 33.08 3.08
5093 5230 2.726821 CCAACTTGCATGGTGAGGTAT 58.273 47.619 18.62 0.00 33.08 2.73
5094 5231 2.424601 CCAACTTGCATGGTGAGGTATG 59.575 50.000 18.62 0.00 33.08 2.39
5095 5232 3.084039 CAACTTGCATGGTGAGGTATGT 58.916 45.455 12.11 0.00 0.00 2.29
5096 5233 2.991250 ACTTGCATGGTGAGGTATGTC 58.009 47.619 4.44 0.00 0.00 3.06
5097 5234 1.935873 CTTGCATGGTGAGGTATGTCG 59.064 52.381 0.00 0.00 0.00 4.35
5098 5235 0.901827 TGCATGGTGAGGTATGTCGT 59.098 50.000 0.00 0.00 0.00 4.34
5099 5236 1.290203 GCATGGTGAGGTATGTCGTG 58.710 55.000 0.00 0.00 0.00 4.35
5100 5237 1.939974 CATGGTGAGGTATGTCGTGG 58.060 55.000 0.00 0.00 0.00 4.94
5101 5238 0.178068 ATGGTGAGGTATGTCGTGGC 59.822 55.000 0.00 0.00 0.00 5.01
5102 5239 1.153429 GGTGAGGTATGTCGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
5103 5240 1.614241 GGTGAGGTATGTCGTGGCCT 61.614 60.000 3.32 0.00 0.00 5.19
5104 5241 0.249398 GTGAGGTATGTCGTGGCCTT 59.751 55.000 3.32 0.00 0.00 4.35
5105 5242 0.535335 TGAGGTATGTCGTGGCCTTC 59.465 55.000 3.32 0.00 0.00 3.46
5106 5243 0.179081 GAGGTATGTCGTGGCCTTCC 60.179 60.000 3.32 0.00 0.00 3.46
5107 5244 0.617820 AGGTATGTCGTGGCCTTCCT 60.618 55.000 3.32 0.00 0.00 3.36
5108 5245 1.117150 GGTATGTCGTGGCCTTCCTA 58.883 55.000 3.32 0.00 0.00 2.94
5109 5246 1.692519 GGTATGTCGTGGCCTTCCTAT 59.307 52.381 3.32 0.00 0.00 2.57
5110 5247 2.288886 GGTATGTCGTGGCCTTCCTATC 60.289 54.545 3.32 0.00 0.00 2.08
5111 5248 0.389391 ATGTCGTGGCCTTCCTATCG 59.611 55.000 3.32 0.00 0.00 2.92
5112 5249 0.968901 TGTCGTGGCCTTCCTATCGT 60.969 55.000 3.32 0.00 0.00 3.73
5113 5250 0.527817 GTCGTGGCCTTCCTATCGTG 60.528 60.000 3.32 0.00 0.00 4.35
5114 5251 1.227263 CGTGGCCTTCCTATCGTGG 60.227 63.158 3.32 0.00 0.00 4.94
5115 5252 1.672854 CGTGGCCTTCCTATCGTGGA 61.673 60.000 3.32 0.00 0.00 4.02
5116 5253 0.759346 GTGGCCTTCCTATCGTGGAT 59.241 55.000 3.32 0.00 35.83 3.41
5117 5254 0.758734 TGGCCTTCCTATCGTGGATG 59.241 55.000 3.32 0.00 35.83 3.51
5118 5255 0.759346 GGCCTTCCTATCGTGGATGT 59.241 55.000 0.00 0.00 35.83 3.06
5119 5256 1.141053 GGCCTTCCTATCGTGGATGTT 59.859 52.381 0.00 0.00 35.83 2.71
5120 5257 2.213499 GCCTTCCTATCGTGGATGTTG 58.787 52.381 0.00 0.00 35.83 3.33
5121 5258 2.420129 GCCTTCCTATCGTGGATGTTGT 60.420 50.000 0.00 0.00 35.83 3.32
5122 5259 3.873910 CCTTCCTATCGTGGATGTTGTT 58.126 45.455 0.00 0.00 35.83 2.83
5123 5260 4.261801 CCTTCCTATCGTGGATGTTGTTT 58.738 43.478 0.00 0.00 35.83 2.83
5124 5261 4.332819 CCTTCCTATCGTGGATGTTGTTTC 59.667 45.833 0.00 0.00 35.83 2.78
5125 5262 3.869065 TCCTATCGTGGATGTTGTTTCC 58.131 45.455 0.00 0.00 0.00 3.13
5126 5263 3.262151 TCCTATCGTGGATGTTGTTTCCA 59.738 43.478 0.00 0.00 40.96 3.53
5127 5264 3.623060 CCTATCGTGGATGTTGTTTCCAG 59.377 47.826 0.00 0.00 43.78 3.86
5128 5265 2.920724 TCGTGGATGTTGTTTCCAGA 57.079 45.000 0.00 0.00 43.78 3.86
5129 5266 2.489971 TCGTGGATGTTGTTTCCAGAC 58.510 47.619 0.00 0.00 43.78 3.51
5130 5267 2.158885 TCGTGGATGTTGTTTCCAGACA 60.159 45.455 0.00 0.00 43.78 3.41
5131 5268 2.813754 CGTGGATGTTGTTTCCAGACAT 59.186 45.455 0.00 0.00 43.78 3.06
5132 5269 4.000325 CGTGGATGTTGTTTCCAGACATA 59.000 43.478 0.00 0.00 43.78 2.29
5133 5270 4.635765 CGTGGATGTTGTTTCCAGACATAT 59.364 41.667 0.00 0.00 43.78 1.78
5134 5271 5.123820 CGTGGATGTTGTTTCCAGACATATT 59.876 40.000 0.00 0.00 43.78 1.28
5135 5272 6.349280 CGTGGATGTTGTTTCCAGACATATTT 60.349 38.462 0.00 0.00 43.78 1.40
5136 5273 7.378181 GTGGATGTTGTTTCCAGACATATTTT 58.622 34.615 0.00 0.00 43.78 1.82
5137 5274 7.872483 GTGGATGTTGTTTCCAGACATATTTTT 59.128 33.333 0.00 0.00 43.78 1.94
5157 5294 2.996249 TCATCAATGGGAGAGAGTGC 57.004 50.000 0.00 0.00 0.00 4.40
5158 5295 2.190538 TCATCAATGGGAGAGAGTGCA 58.809 47.619 0.00 0.00 0.00 4.57
5159 5296 2.573009 TCATCAATGGGAGAGAGTGCAA 59.427 45.455 0.00 0.00 0.00 4.08
5160 5297 2.479566 TCAATGGGAGAGAGTGCAAC 57.520 50.000 0.00 0.00 0.00 4.17
5161 5298 1.081892 CAATGGGAGAGAGTGCAACG 58.918 55.000 0.00 0.00 45.86 4.10
5162 5299 0.674895 AATGGGAGAGAGTGCAACGC 60.675 55.000 0.00 0.00 45.86 4.84
5163 5300 2.435059 GGGAGAGAGTGCAACGCC 60.435 66.667 0.00 0.00 45.86 5.68
5164 5301 2.435059 GGAGAGAGTGCAACGCCC 60.435 66.667 0.00 0.00 45.86 6.13
5165 5302 2.435059 GAGAGAGTGCAACGCCCC 60.435 66.667 0.00 0.00 45.86 5.80
5166 5303 3.959991 GAGAGAGTGCAACGCCCCC 62.960 68.421 0.00 0.00 45.86 5.40
5180 5317 2.359011 CCCCCAAGTTGCCCTACC 59.641 66.667 0.00 0.00 0.00 3.18
5181 5318 2.543797 CCCCCAAGTTGCCCTACCA 61.544 63.158 0.00 0.00 0.00 3.25
5182 5319 1.462928 CCCCAAGTTGCCCTACCAA 59.537 57.895 0.00 0.00 0.00 3.67
5183 5320 0.041090 CCCCAAGTTGCCCTACCAAT 59.959 55.000 0.00 0.00 0.00 3.16
5184 5321 1.474330 CCCAAGTTGCCCTACCAATC 58.526 55.000 0.00 0.00 0.00 2.67
5185 5322 1.272425 CCCAAGTTGCCCTACCAATCA 60.272 52.381 0.00 0.00 0.00 2.57
5186 5323 1.818674 CCAAGTTGCCCTACCAATCAC 59.181 52.381 0.00 0.00 0.00 3.06
5187 5324 2.513753 CAAGTTGCCCTACCAATCACA 58.486 47.619 0.00 0.00 0.00 3.58
5188 5325 3.091545 CAAGTTGCCCTACCAATCACAT 58.908 45.455 0.00 0.00 0.00 3.21
5189 5326 2.726821 AGTTGCCCTACCAATCACATG 58.273 47.619 0.00 0.00 0.00 3.21
5190 5327 1.750778 GTTGCCCTACCAATCACATGG 59.249 52.381 0.00 0.00 46.38 3.66
5191 5328 1.294041 TGCCCTACCAATCACATGGA 58.706 50.000 0.00 0.00 43.54 3.41
5192 5329 1.212688 TGCCCTACCAATCACATGGAG 59.787 52.381 0.00 0.00 43.54 3.86
5193 5330 1.477558 GCCCTACCAATCACATGGAGG 60.478 57.143 0.00 3.15 43.54 4.30
5194 5331 1.477558 CCCTACCAATCACATGGAGGC 60.478 57.143 0.00 0.00 43.54 4.70
5195 5332 1.492176 CCTACCAATCACATGGAGGCT 59.508 52.381 0.00 0.00 43.54 4.58
5196 5333 2.569059 CTACCAATCACATGGAGGCTG 58.431 52.381 0.00 0.00 43.54 4.85
5197 5334 0.994247 ACCAATCACATGGAGGCTGA 59.006 50.000 0.00 0.00 43.54 4.26
5198 5335 1.064906 ACCAATCACATGGAGGCTGAG 60.065 52.381 0.00 0.00 43.54 3.35
5199 5336 1.022735 CAATCACATGGAGGCTGAGC 58.977 55.000 0.00 0.00 0.00 4.26
5211 5348 3.383092 GCTGAGCCAATCTCTGAGG 57.617 57.895 4.59 0.00 41.62 3.86
5212 5349 0.829333 GCTGAGCCAATCTCTGAGGA 59.171 55.000 4.59 0.00 41.62 3.71
5213 5350 1.202557 GCTGAGCCAATCTCTGAGGAG 60.203 57.143 4.59 0.00 41.62 3.69
5214 5351 1.413445 CTGAGCCAATCTCTGAGGAGG 59.587 57.143 4.59 5.80 41.62 4.30
5215 5352 1.273495 TGAGCCAATCTCTGAGGAGGT 60.273 52.381 4.59 0.00 42.38 3.85
5216 5353 1.836802 GAGCCAATCTCTGAGGAGGTT 59.163 52.381 4.59 2.72 43.03 3.50
5217 5354 1.836802 AGCCAATCTCTGAGGAGGTTC 59.163 52.381 4.59 0.00 40.58 3.62
5218 5355 1.134250 GCCAATCTCTGAGGAGGTTCC 60.134 57.143 4.59 0.00 40.58 3.62
5219 5356 2.191400 CCAATCTCTGAGGAGGTTCCA 58.809 52.381 4.59 0.00 40.58 3.53
5220 5357 2.573462 CCAATCTCTGAGGAGGTTCCAA 59.427 50.000 4.59 0.00 40.58 3.53
5221 5358 3.009473 CCAATCTCTGAGGAGGTTCCAAA 59.991 47.826 4.59 0.00 40.58 3.28
5222 5359 4.324874 CCAATCTCTGAGGAGGTTCCAAAT 60.325 45.833 4.59 0.00 40.58 2.32
5223 5360 5.259632 CAATCTCTGAGGAGGTTCCAAATT 58.740 41.667 4.59 0.00 40.58 1.82
5224 5361 4.559862 TCTCTGAGGAGGTTCCAAATTC 57.440 45.455 4.59 0.00 39.61 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.171003 GGTGAGGCTTGGTTTTGCTAT 58.829 47.619 0.00 0.00 0.00 2.97
1 2 1.133637 TGGTGAGGCTTGGTTTTGCTA 60.134 47.619 0.00 0.00 0.00 3.49
2 3 0.396974 TGGTGAGGCTTGGTTTTGCT 60.397 50.000 0.00 0.00 0.00 3.91
26 27 8.628630 TGGACATAAATTCATGTAGTTTGTCA 57.371 30.769 18.91 9.94 39.25 3.58
46 47 3.066621 GCCGCATCAATATTTTCTGGACA 59.933 43.478 0.00 0.00 0.00 4.02
52 53 3.066621 TCTGTGGCCGCATCAATATTTTC 59.933 43.478 21.54 0.00 0.00 2.29
66 67 3.068024 TCTCAATTGTGTTTTCTGTGGCC 59.932 43.478 5.13 0.00 0.00 5.36
71 72 7.650504 ACATTCACATCTCAATTGTGTTTTCTG 59.349 33.333 5.13 1.33 43.86 3.02
154 155 5.063438 GCAGCGTACAATAAAGTCTTCATCA 59.937 40.000 0.00 0.00 0.00 3.07
176 177 0.320858 TTTCGGCGGTGATTGTAGCA 60.321 50.000 7.21 0.00 0.00 3.49
180 181 0.322322 TACCTTTCGGCGGTGATTGT 59.678 50.000 7.21 0.00 35.98 2.71
181 182 1.663695 ATACCTTTCGGCGGTGATTG 58.336 50.000 7.21 0.00 35.98 2.67
182 183 3.547054 TTATACCTTTCGGCGGTGATT 57.453 42.857 7.21 0.00 35.98 2.57
264 265 0.033109 GCAAGGAGGCCCTGGTTTAT 60.033 55.000 0.00 0.00 43.48 1.40
296 297 1.003233 GTCCCTCCTTCATTGGTCGTT 59.997 52.381 0.00 0.00 0.00 3.85
299 300 0.107654 CGGTCCCTCCTTCATTGGTC 60.108 60.000 0.00 0.00 0.00 4.02
305 306 1.000019 ATCGTCGGTCCCTCCTTCA 60.000 57.895 0.00 0.00 0.00 3.02
319 322 1.664659 CCTTCGTCGTCTGTAGATCGT 59.335 52.381 0.00 0.00 0.00 3.73
328 331 2.486472 TTACCTCTCCTTCGTCGTCT 57.514 50.000 0.00 0.00 0.00 4.18
331 334 1.134367 TGCATTACCTCTCCTTCGTCG 59.866 52.381 0.00 0.00 0.00 5.12
349 352 1.168714 GTGGTGATCAGAGGGTTTGC 58.831 55.000 0.00 0.00 0.00 3.68
423 435 6.373005 TCAGAAGATTGATTTGGTACCAGA 57.627 37.500 15.65 11.70 0.00 3.86
760 880 0.880718 GCGTGGGAGATCGGAATTCC 60.881 60.000 15.01 15.01 0.00 3.01
761 881 0.880718 GGCGTGGGAGATCGGAATTC 60.881 60.000 0.00 0.00 0.00 2.17
923 1045 0.865111 CGGATCAAACAACAGCGACA 59.135 50.000 0.00 0.00 0.00 4.35
1034 1156 3.288290 CCCGATCCTCCGTCTCCG 61.288 72.222 0.00 0.00 0.00 4.63
1253 1375 2.214181 ATCAGACACCACCTCGTCGC 62.214 60.000 0.00 0.00 37.23 5.19
1257 1379 0.390340 CCACATCAGACACCACCTCG 60.390 60.000 0.00 0.00 0.00 4.63
1306 1428 3.879295 GCAGCCTGTTGATCATAGCTTAA 59.121 43.478 0.00 0.00 34.66 1.85
1461 1583 4.446413 CCGGTCACCGTAGCCACC 62.446 72.222 16.87 0.00 46.80 4.61
1462 1584 4.446413 CCCGGTCACCGTAGCCAC 62.446 72.222 16.87 0.00 46.80 5.01
1468 1590 2.284405 AGATTCCCCGGTCACCGT 60.284 61.111 16.87 0.00 46.80 4.83
1479 1601 0.108424 ACTCAGCAGCGACAGATTCC 60.108 55.000 0.00 0.00 0.00 3.01
1505 1627 3.494332 GCAGGCCTATCATCCTCAATTT 58.506 45.455 3.98 0.00 0.00 1.82
1516 1638 0.321122 CCAATCTCGGCAGGCCTATC 60.321 60.000 3.98 0.00 0.00 2.08
1518 1640 1.689233 ACCAATCTCGGCAGGCCTA 60.689 57.895 3.98 0.00 0.00 3.93
1647 1769 1.078848 CCTGCCCTTCTCAGGTTCG 60.079 63.158 1.07 0.00 44.62 3.95
1695 1817 4.844420 GAGTTCATGGGGAGCTCG 57.156 61.111 7.83 0.00 42.79 5.03
1757 1879 4.133078 GCTATATTCTGGCTGCTCTTTGT 58.867 43.478 0.00 0.00 0.00 2.83
1836 1958 1.679311 GACCACCACATCAGGCTCA 59.321 57.895 0.00 0.00 0.00 4.26
1893 2015 0.179078 CAGGAGCAGAGCTAGCCTTG 60.179 60.000 12.13 11.34 39.88 3.61
1957 2079 1.735920 CAGCAGGACGAGACAGCAC 60.736 63.158 0.00 0.00 0.00 4.40
1986 2108 1.149148 GAGGCAACAAGGAAGACGAC 58.851 55.000 0.00 0.00 41.41 4.34
2008 2130 2.046892 CTGCTGAACAGGTCGGGG 60.047 66.667 0.00 0.00 43.19 5.73
2043 2165 3.311110 TCCCTGTCCACAGCGACC 61.311 66.667 0.76 0.00 42.47 4.79
2269 2391 1.273759 TCTGCCATCTCTTGTGCTCT 58.726 50.000 0.00 0.00 0.00 4.09
2563 2685 2.746279 TCAGGAGGGTTTTTGCTCAA 57.254 45.000 0.00 0.00 0.00 3.02
3383 3505 2.611971 GCAACATTGGTCGGAGTACTGA 60.612 50.000 0.00 0.00 0.00 3.41
3553 3675 7.519002 ACAGCAAATAATCTCTCAACGTTTAC 58.481 34.615 0.00 0.00 0.00 2.01
3573 3695 1.953686 GGCACTTTACCTTTGACAGCA 59.046 47.619 0.00 0.00 0.00 4.41
3672 3794 2.551504 GGAAGAAGTTTTACCCTCGCCA 60.552 50.000 0.00 0.00 0.00 5.69
3693 3815 1.213537 CTGCAAATCAAGCCCCACG 59.786 57.895 0.00 0.00 0.00 4.94
3831 3953 5.144692 TCAGTCTGTCTTCAATCTTCAGG 57.855 43.478 0.00 0.00 0.00 3.86
3832 3954 7.488792 CACTATCAGTCTGTCTTCAATCTTCAG 59.511 40.741 0.00 0.00 0.00 3.02
4090 4212 1.228124 CGGTCCCCTTGTTGCTCAA 60.228 57.895 0.00 0.00 34.61 3.02
4186 4308 5.780793 AGTAGTTGTCCAGTAACTTCCAGAT 59.219 40.000 0.00 0.00 39.06 2.90
4189 4311 6.722590 TCATAGTAGTTGTCCAGTAACTTCCA 59.277 38.462 0.00 0.00 39.06 3.53
4235 4357 1.904771 CCGGGTGTCTATTCAGGCA 59.095 57.895 0.00 0.00 32.73 4.75
4250 4372 1.367840 CTAAGGATCTTCCCGCCGG 59.632 63.158 0.00 0.00 37.19 6.13
4271 4393 5.215160 GGTTCCGATTTATGCTTGCATTAG 58.785 41.667 13.52 0.00 0.00 1.73
4345 4468 5.242615 GGAGAGAGCTCAGGAAAACAATTTT 59.757 40.000 17.77 0.00 43.14 1.82
4346 4469 4.764308 GGAGAGAGCTCAGGAAAACAATTT 59.236 41.667 17.77 0.00 43.14 1.82
4347 4470 4.042684 AGGAGAGAGCTCAGGAAAACAATT 59.957 41.667 17.77 0.00 43.14 2.32
4348 4471 3.586618 AGGAGAGAGCTCAGGAAAACAAT 59.413 43.478 17.77 0.00 43.14 2.71
4370 4493 4.202141 CCCAAAATTCAGCTTCACTTCACA 60.202 41.667 0.00 0.00 0.00 3.58
4392 4515 3.750130 GGACATCAGACATGTATGCATCC 59.250 47.826 15.67 16.23 31.99 3.51
4512 4649 5.106515 GGCAAAGCTTAGGTCTCAGTTTTAG 60.107 44.000 0.00 0.00 0.00 1.85
4513 4650 4.760204 GGCAAAGCTTAGGTCTCAGTTTTA 59.240 41.667 0.00 0.00 0.00 1.52
4519 4656 1.977854 TGAGGCAAAGCTTAGGTCTCA 59.022 47.619 23.78 23.78 0.00 3.27
4525 4662 3.067742 CCAATGGATGAGGCAAAGCTTAG 59.932 47.826 0.00 0.00 0.00 2.18
4553 4690 9.425577 GTGTAGCAAAGTCTATTCTTCTTAACT 57.574 33.333 0.00 0.00 0.00 2.24
4555 4692 9.204570 GTGTGTAGCAAAGTCTATTCTTCTTAA 57.795 33.333 0.00 0.00 0.00 1.85
4556 4693 7.817962 GGTGTGTAGCAAAGTCTATTCTTCTTA 59.182 37.037 0.00 0.00 0.00 2.10
4557 4694 6.651225 GGTGTGTAGCAAAGTCTATTCTTCTT 59.349 38.462 0.00 0.00 0.00 2.52
4574 4711 8.498054 AATTAATGAATGAGAGTGGTGTGTAG 57.502 34.615 0.00 0.00 0.00 2.74
4636 4773 4.770531 AGAGTAATGGCCTTTTTGTAACCC 59.229 41.667 9.46 0.00 0.00 4.11
4647 4784 2.122768 CCAGGAGAAGAGTAATGGCCT 58.877 52.381 3.32 0.00 0.00 5.19
4658 4795 4.530875 AGGAAACATAATGCCAGGAGAAG 58.469 43.478 0.00 0.00 0.00 2.85
4659 4796 4.591321 AGGAAACATAATGCCAGGAGAA 57.409 40.909 0.00 0.00 0.00 2.87
4660 4797 5.912149 ATAGGAAACATAATGCCAGGAGA 57.088 39.130 0.00 0.00 0.00 3.71
4661 4798 6.966534 AAATAGGAAACATAATGCCAGGAG 57.033 37.500 0.00 0.00 0.00 3.69
4662 4799 7.732222 AAAAATAGGAAACATAATGCCAGGA 57.268 32.000 0.00 0.00 0.00 3.86
4689 4826 2.021457 ACTATTGGTTATTGCGGGTGC 58.979 47.619 0.00 0.00 43.20 5.01
4690 4827 3.541632 AGACTATTGGTTATTGCGGGTG 58.458 45.455 0.00 0.00 0.00 4.61
4691 4828 3.926058 AGACTATTGGTTATTGCGGGT 57.074 42.857 0.00 0.00 0.00 5.28
4692 4829 3.746492 GCTAGACTATTGGTTATTGCGGG 59.254 47.826 0.00 0.00 0.00 6.13
4693 4830 4.632153 AGCTAGACTATTGGTTATTGCGG 58.368 43.478 0.00 0.00 0.00 5.69
4694 4831 5.986135 AGAAGCTAGACTATTGGTTATTGCG 59.014 40.000 0.00 0.00 0.00 4.85
4695 4832 6.763610 ACAGAAGCTAGACTATTGGTTATTGC 59.236 38.462 0.00 0.00 0.00 3.56
4696 4833 8.723942 AACAGAAGCTAGACTATTGGTTATTG 57.276 34.615 0.00 0.00 0.00 1.90
4697 4834 9.740710 AAAACAGAAGCTAGACTATTGGTTATT 57.259 29.630 0.00 0.00 0.00 1.40
4698 4835 9.167311 CAAAACAGAAGCTAGACTATTGGTTAT 57.833 33.333 0.00 0.00 0.00 1.89
4699 4836 8.372459 TCAAAACAGAAGCTAGACTATTGGTTA 58.628 33.333 0.00 0.00 0.00 2.85
4700 4837 7.224297 TCAAAACAGAAGCTAGACTATTGGTT 58.776 34.615 0.00 0.00 0.00 3.67
4701 4838 6.769512 TCAAAACAGAAGCTAGACTATTGGT 58.230 36.000 0.00 0.00 0.00 3.67
4702 4839 7.201679 CCATCAAAACAGAAGCTAGACTATTGG 60.202 40.741 0.00 0.00 0.00 3.16
4703 4840 7.335422 ACCATCAAAACAGAAGCTAGACTATTG 59.665 37.037 0.00 0.00 0.00 1.90
4704 4841 7.335422 CACCATCAAAACAGAAGCTAGACTATT 59.665 37.037 0.00 0.00 0.00 1.73
4705 4842 6.820656 CACCATCAAAACAGAAGCTAGACTAT 59.179 38.462 0.00 0.00 0.00 2.12
4706 4843 6.166279 CACCATCAAAACAGAAGCTAGACTA 58.834 40.000 0.00 0.00 0.00 2.59
4707 4844 4.999950 CACCATCAAAACAGAAGCTAGACT 59.000 41.667 0.00 0.00 0.00 3.24
4708 4845 4.378874 GCACCATCAAAACAGAAGCTAGAC 60.379 45.833 0.00 0.00 0.00 2.59
4709 4846 3.753272 GCACCATCAAAACAGAAGCTAGA 59.247 43.478 0.00 0.00 0.00 2.43
4710 4847 3.119708 GGCACCATCAAAACAGAAGCTAG 60.120 47.826 0.00 0.00 0.00 3.42
4711 4848 2.819608 GGCACCATCAAAACAGAAGCTA 59.180 45.455 0.00 0.00 0.00 3.32
4712 4849 1.615392 GGCACCATCAAAACAGAAGCT 59.385 47.619 0.00 0.00 0.00 3.74
4713 4850 1.666888 CGGCACCATCAAAACAGAAGC 60.667 52.381 0.00 0.00 0.00 3.86
4714 4851 1.879380 TCGGCACCATCAAAACAGAAG 59.121 47.619 0.00 0.00 0.00 2.85
4715 4852 1.974265 TCGGCACCATCAAAACAGAA 58.026 45.000 0.00 0.00 0.00 3.02
4716 4853 1.879380 CTTCGGCACCATCAAAACAGA 59.121 47.619 0.00 0.00 0.00 3.41
4717 4854 1.879380 TCTTCGGCACCATCAAAACAG 59.121 47.619 0.00 0.00 0.00 3.16
4718 4855 1.974265 TCTTCGGCACCATCAAAACA 58.026 45.000 0.00 0.00 0.00 2.83
4719 4856 2.487762 TCATCTTCGGCACCATCAAAAC 59.512 45.455 0.00 0.00 0.00 2.43
4720 4857 2.789213 TCATCTTCGGCACCATCAAAA 58.211 42.857 0.00 0.00 0.00 2.44
4721 4858 2.488204 TCATCTTCGGCACCATCAAA 57.512 45.000 0.00 0.00 0.00 2.69
4722 4859 2.564771 GATCATCTTCGGCACCATCAA 58.435 47.619 0.00 0.00 0.00 2.57
4723 4860 1.538849 CGATCATCTTCGGCACCATCA 60.539 52.381 0.00 0.00 35.50 3.07
4724 4861 1.143305 CGATCATCTTCGGCACCATC 58.857 55.000 0.00 0.00 35.50 3.51
4725 4862 3.295734 CGATCATCTTCGGCACCAT 57.704 52.632 0.00 0.00 35.50 3.55
4726 4863 4.833811 CGATCATCTTCGGCACCA 57.166 55.556 0.00 0.00 35.50 4.17
4732 4869 0.179100 ACAGGCACCGATCATCTTCG 60.179 55.000 0.00 0.00 38.83 3.79
4733 4870 1.293924 CACAGGCACCGATCATCTTC 58.706 55.000 0.00 0.00 0.00 2.87
4734 4871 0.615331 ACACAGGCACCGATCATCTT 59.385 50.000 0.00 0.00 0.00 2.40
4735 4872 0.615331 AACACAGGCACCGATCATCT 59.385 50.000 0.00 0.00 0.00 2.90
4736 4873 0.729116 CAACACAGGCACCGATCATC 59.271 55.000 0.00 0.00 0.00 2.92
4737 4874 0.324614 TCAACACAGGCACCGATCAT 59.675 50.000 0.00 0.00 0.00 2.45
4738 4875 0.602638 GTCAACACAGGCACCGATCA 60.603 55.000 0.00 0.00 0.00 2.92
4739 4876 0.320771 AGTCAACACAGGCACCGATC 60.321 55.000 0.00 0.00 0.00 3.69
4740 4877 0.108585 AAGTCAACACAGGCACCGAT 59.891 50.000 0.00 0.00 0.00 4.18
4741 4878 0.813610 CAAGTCAACACAGGCACCGA 60.814 55.000 0.00 0.00 0.00 4.69
4742 4879 1.095228 ACAAGTCAACACAGGCACCG 61.095 55.000 0.00 0.00 0.00 4.94
4743 4880 0.381801 CACAAGTCAACACAGGCACC 59.618 55.000 0.00 0.00 0.00 5.01
4744 4881 0.248621 GCACAAGTCAACACAGGCAC 60.249 55.000 0.00 0.00 0.00 5.01
4745 4882 1.383456 GGCACAAGTCAACACAGGCA 61.383 55.000 0.00 0.00 0.00 4.75
4746 4883 1.360192 GGCACAAGTCAACACAGGC 59.640 57.895 0.00 0.00 0.00 4.85
4747 4884 1.648720 CGGCACAAGTCAACACAGG 59.351 57.895 0.00 0.00 0.00 4.00
4748 4885 0.813610 TCCGGCACAAGTCAACACAG 60.814 55.000 0.00 0.00 0.00 3.66
4749 4886 0.813610 CTCCGGCACAAGTCAACACA 60.814 55.000 0.00 0.00 0.00 3.72
4750 4887 1.941812 CTCCGGCACAAGTCAACAC 59.058 57.895 0.00 0.00 0.00 3.32
4751 4888 1.891919 GCTCCGGCACAAGTCAACA 60.892 57.895 0.00 0.00 38.54 3.33
4752 4889 1.891919 TGCTCCGGCACAAGTCAAC 60.892 57.895 0.00 0.00 44.28 3.18
4753 4890 2.508436 TGCTCCGGCACAAGTCAA 59.492 55.556 0.00 0.00 44.28 3.18
4763 4900 3.934391 GAACTCCCGTGTGCTCCGG 62.934 68.421 0.00 0.00 45.07 5.14
4764 4901 2.432628 GAACTCCCGTGTGCTCCG 60.433 66.667 0.00 0.00 0.00 4.63
4765 4902 2.047179 GGAACTCCCGTGTGCTCC 60.047 66.667 0.00 0.00 0.00 4.70
4766 4903 3.060866 AGGAACTCCCGTGTGCTC 58.939 61.111 0.00 0.00 40.87 4.26
4778 4915 5.474876 AGTTGGATCATGTGAAAAGAGGAAC 59.525 40.000 0.00 0.00 0.00 3.62
4779 4916 5.634118 AGTTGGATCATGTGAAAAGAGGAA 58.366 37.500 0.00 0.00 0.00 3.36
4780 4917 5.246981 AGTTGGATCATGTGAAAAGAGGA 57.753 39.130 0.00 0.00 0.00 3.71
4781 4918 6.656693 AGTTAGTTGGATCATGTGAAAAGAGG 59.343 38.462 0.00 0.00 0.00 3.69
4782 4919 7.678947 AGTTAGTTGGATCATGTGAAAAGAG 57.321 36.000 0.00 0.00 0.00 2.85
4783 4920 7.522073 GCAAGTTAGTTGGATCATGTGAAAAGA 60.522 37.037 1.75 0.00 36.56 2.52
4784 4921 6.583806 GCAAGTTAGTTGGATCATGTGAAAAG 59.416 38.462 1.75 0.00 36.56 2.27
4785 4922 6.040278 TGCAAGTTAGTTGGATCATGTGAAAA 59.960 34.615 1.75 0.00 36.56 2.29
4786 4923 5.534278 TGCAAGTTAGTTGGATCATGTGAAA 59.466 36.000 1.75 0.00 36.56 2.69
4787 4924 5.069318 TGCAAGTTAGTTGGATCATGTGAA 58.931 37.500 1.75 0.00 36.56 3.18
4788 4925 4.650734 TGCAAGTTAGTTGGATCATGTGA 58.349 39.130 1.75 0.00 36.56 3.58
4789 4926 5.571784 ATGCAAGTTAGTTGGATCATGTG 57.428 39.130 0.85 0.00 43.29 3.21
4790 4927 6.317140 CAGTATGCAAGTTAGTTGGATCATGT 59.683 38.462 9.98 0.00 43.29 3.21
4791 4928 6.539826 TCAGTATGCAAGTTAGTTGGATCATG 59.460 38.462 9.98 10.19 43.29 3.07
4792 4929 6.540189 GTCAGTATGCAAGTTAGTTGGATCAT 59.460 38.462 9.98 3.83 43.29 2.45
4793 4930 5.874810 GTCAGTATGCAAGTTAGTTGGATCA 59.125 40.000 9.98 0.00 43.29 2.92
4794 4931 6.109359 AGTCAGTATGCAAGTTAGTTGGATC 58.891 40.000 9.98 3.53 43.29 3.36
4796 4933 5.483685 AGTCAGTATGCAAGTTAGTTGGA 57.516 39.130 1.75 0.00 41.30 3.53
4797 4934 5.470098 ACAAGTCAGTATGCAAGTTAGTTGG 59.530 40.000 1.75 0.00 36.56 3.77
4798 4935 6.017934 ACACAAGTCAGTATGCAAGTTAGTTG 60.018 38.462 0.00 0.00 39.41 3.16
4799 4936 6.055588 ACACAAGTCAGTATGCAAGTTAGTT 58.944 36.000 0.00 0.00 34.76 2.24
4800 4937 5.611374 ACACAAGTCAGTATGCAAGTTAGT 58.389 37.500 0.00 0.00 34.76 2.24
4801 4938 6.158175 GACACAAGTCAGTATGCAAGTTAG 57.842 41.667 0.00 0.00 44.34 2.34
4828 4965 3.306780 CCAGAGGACGGAGAGCTTAAAAA 60.307 47.826 0.00 0.00 0.00 1.94
4829 4966 2.233922 CCAGAGGACGGAGAGCTTAAAA 59.766 50.000 0.00 0.00 0.00 1.52
4830 4967 1.825474 CCAGAGGACGGAGAGCTTAAA 59.175 52.381 0.00 0.00 0.00 1.52
4831 4968 1.475403 CCAGAGGACGGAGAGCTTAA 58.525 55.000 0.00 0.00 0.00 1.85
4832 4969 1.038130 GCCAGAGGACGGAGAGCTTA 61.038 60.000 0.00 0.00 0.00 3.09
4833 4970 2.355193 GCCAGAGGACGGAGAGCTT 61.355 63.158 0.00 0.00 0.00 3.74
4834 4971 2.757917 GCCAGAGGACGGAGAGCT 60.758 66.667 0.00 0.00 0.00 4.09
4835 4972 1.965754 AATGCCAGAGGACGGAGAGC 61.966 60.000 0.00 0.00 0.00 4.09
4836 4973 0.539051 AAATGCCAGAGGACGGAGAG 59.461 55.000 0.00 0.00 0.00 3.20
4837 4974 1.860641 TAAATGCCAGAGGACGGAGA 58.139 50.000 0.00 0.00 0.00 3.71
4838 4975 2.918712 ATAAATGCCAGAGGACGGAG 57.081 50.000 0.00 0.00 0.00 4.63
4839 4976 2.503765 TGAATAAATGCCAGAGGACGGA 59.496 45.455 0.00 0.00 0.00 4.69
4840 4977 2.917933 TGAATAAATGCCAGAGGACGG 58.082 47.619 0.00 0.00 0.00 4.79
4841 4978 6.618287 TTATTGAATAAATGCCAGAGGACG 57.382 37.500 0.00 0.00 0.00 4.79
4842 4979 8.734386 CCTATTATTGAATAAATGCCAGAGGAC 58.266 37.037 1.27 0.00 0.00 3.85
4843 4980 7.394359 GCCTATTATTGAATAAATGCCAGAGGA 59.606 37.037 1.27 0.00 0.00 3.71
4844 4981 7.542025 GCCTATTATTGAATAAATGCCAGAGG 58.458 38.462 1.27 0.00 0.00 3.69
4845 4982 7.119699 TCGCCTATTATTGAATAAATGCCAGAG 59.880 37.037 1.27 0.00 0.00 3.35
4846 4983 6.939730 TCGCCTATTATTGAATAAATGCCAGA 59.060 34.615 1.27 0.00 0.00 3.86
4847 4984 7.144722 TCGCCTATTATTGAATAAATGCCAG 57.855 36.000 1.27 0.00 0.00 4.85
4848 4985 7.309133 CCTTCGCCTATTATTGAATAAATGCCA 60.309 37.037 1.27 0.00 0.00 4.92
4849 4986 7.029563 CCTTCGCCTATTATTGAATAAATGCC 58.970 38.462 1.27 0.00 0.00 4.40
4850 4987 6.528072 GCCTTCGCCTATTATTGAATAAATGC 59.472 38.462 1.27 4.57 0.00 3.56
4851 4988 7.592938 TGCCTTCGCCTATTATTGAATAAATG 58.407 34.615 1.27 0.00 0.00 2.32
4852 4989 7.759489 TGCCTTCGCCTATTATTGAATAAAT 57.241 32.000 1.27 0.00 0.00 1.40
4853 4990 7.759489 ATGCCTTCGCCTATTATTGAATAAA 57.241 32.000 1.27 0.00 0.00 1.40
4854 4991 9.109393 GATATGCCTTCGCCTATTATTGAATAA 57.891 33.333 0.00 0.00 0.00 1.40
4855 4992 8.486210 AGATATGCCTTCGCCTATTATTGAATA 58.514 33.333 0.00 0.00 0.00 1.75
4856 4993 7.281774 CAGATATGCCTTCGCCTATTATTGAAT 59.718 37.037 0.00 0.00 0.00 2.57
4857 4994 6.595326 CAGATATGCCTTCGCCTATTATTGAA 59.405 38.462 0.00 0.00 0.00 2.69
4858 4995 6.070824 TCAGATATGCCTTCGCCTATTATTGA 60.071 38.462 0.00 0.00 0.00 2.57
4859 4996 6.036517 GTCAGATATGCCTTCGCCTATTATTG 59.963 42.308 0.00 0.00 0.00 1.90
4860 4997 6.070538 AGTCAGATATGCCTTCGCCTATTATT 60.071 38.462 0.00 0.00 0.00 1.40
4861 4998 5.423610 AGTCAGATATGCCTTCGCCTATTAT 59.576 40.000 0.00 0.00 0.00 1.28
4862 4999 4.772624 AGTCAGATATGCCTTCGCCTATTA 59.227 41.667 0.00 0.00 0.00 0.98
4863 5000 3.580458 AGTCAGATATGCCTTCGCCTATT 59.420 43.478 0.00 0.00 0.00 1.73
4864 5001 3.056250 CAGTCAGATATGCCTTCGCCTAT 60.056 47.826 0.00 0.00 0.00 2.57
4865 5002 2.297315 CAGTCAGATATGCCTTCGCCTA 59.703 50.000 0.00 0.00 0.00 3.93
4866 5003 1.069823 CAGTCAGATATGCCTTCGCCT 59.930 52.381 0.00 0.00 0.00 5.52
4867 5004 1.506493 CAGTCAGATATGCCTTCGCC 58.494 55.000 0.00 0.00 0.00 5.54
4868 5005 0.864455 GCAGTCAGATATGCCTTCGC 59.136 55.000 0.05 0.00 36.41 4.70
4869 5006 2.229675 TGCAGTCAGATATGCCTTCG 57.770 50.000 7.83 0.00 41.85 3.79
4870 5007 4.970662 TTTTGCAGTCAGATATGCCTTC 57.029 40.909 7.83 0.00 41.85 3.46
4871 5008 5.927281 ATTTTTGCAGTCAGATATGCCTT 57.073 34.783 7.83 0.00 41.85 4.35
4872 5009 6.125029 ACTATTTTTGCAGTCAGATATGCCT 58.875 36.000 7.83 0.00 41.85 4.75
4873 5010 6.382869 ACTATTTTTGCAGTCAGATATGCC 57.617 37.500 7.83 0.00 41.85 4.40
4874 5011 8.147642 ACTACTATTTTTGCAGTCAGATATGC 57.852 34.615 4.06 4.06 42.86 3.14
4879 5016 9.856488 CTTACTACTACTATTTTTGCAGTCAGA 57.144 33.333 0.00 0.00 0.00 3.27
4880 5017 9.856488 TCTTACTACTACTATTTTTGCAGTCAG 57.144 33.333 0.00 0.00 0.00 3.51
4885 5022 9.760077 GGCTATCTTACTACTACTATTTTTGCA 57.240 33.333 0.00 0.00 0.00 4.08
4886 5023 9.760077 TGGCTATCTTACTACTACTATTTTTGC 57.240 33.333 0.00 0.00 0.00 3.68
4889 5026 9.091220 CCCTGGCTATCTTACTACTACTATTTT 57.909 37.037 0.00 0.00 0.00 1.82
4890 5027 8.454494 TCCCTGGCTATCTTACTACTACTATTT 58.546 37.037 0.00 0.00 0.00 1.40
4891 5028 7.997915 TCCCTGGCTATCTTACTACTACTATT 58.002 38.462 0.00 0.00 0.00 1.73
4892 5029 7.585884 TCCCTGGCTATCTTACTACTACTAT 57.414 40.000 0.00 0.00 0.00 2.12
4893 5030 7.585884 ATCCCTGGCTATCTTACTACTACTA 57.414 40.000 0.00 0.00 0.00 1.82
4894 5031 5.926580 TCCCTGGCTATCTTACTACTACT 57.073 43.478 0.00 0.00 0.00 2.57
4895 5032 7.668886 TGTAATCCCTGGCTATCTTACTACTAC 59.331 40.741 0.00 0.00 0.00 2.73
4896 5033 7.762610 TGTAATCCCTGGCTATCTTACTACTA 58.237 38.462 0.00 0.00 0.00 1.82
4897 5034 6.621394 TGTAATCCCTGGCTATCTTACTACT 58.379 40.000 0.00 0.00 0.00 2.57
4898 5035 6.912951 TGTAATCCCTGGCTATCTTACTAC 57.087 41.667 0.00 0.00 0.00 2.73
4899 5036 7.246027 TGATGTAATCCCTGGCTATCTTACTA 58.754 38.462 0.00 0.00 44.73 1.82
4900 5037 6.084738 TGATGTAATCCCTGGCTATCTTACT 58.915 40.000 0.00 0.00 44.73 2.24
4901 5038 6.360370 TGATGTAATCCCTGGCTATCTTAC 57.640 41.667 0.00 0.00 44.73 2.34
4902 5039 7.017551 ACATTGATGTAATCCCTGGCTATCTTA 59.982 37.037 0.00 0.00 44.73 2.10
4903 5040 5.912149 TTGATGTAATCCCTGGCTATCTT 57.088 39.130 0.00 0.00 44.73 2.40
4904 5041 5.311649 ACATTGATGTAATCCCTGGCTATCT 59.688 40.000 0.00 0.00 44.73 1.98
4905 5042 5.564550 ACATTGATGTAATCCCTGGCTATC 58.435 41.667 0.00 0.00 44.73 2.08
4906 5043 5.589367 ACATTGATGTAATCCCTGGCTAT 57.411 39.130 0.00 0.00 44.73 2.97
4907 5044 5.104151 TGAACATTGATGTAATCCCTGGCTA 60.104 40.000 0.00 0.00 44.73 3.93
4908 5045 3.959495 ACATTGATGTAATCCCTGGCT 57.041 42.857 0.00 0.00 44.73 4.75
4909 5046 3.953612 TGAACATTGATGTAATCCCTGGC 59.046 43.478 0.00 0.00 44.73 4.85
4910 5047 6.528537 TTTGAACATTGATGTAATCCCTGG 57.471 37.500 0.00 0.00 44.73 4.45
4911 5048 7.543172 CAGTTTTGAACATTGATGTAATCCCTG 59.457 37.037 0.00 0.00 44.73 4.45
4912 5049 7.451255 TCAGTTTTGAACATTGATGTAATCCCT 59.549 33.333 0.00 0.00 44.73 4.20
4913 5050 7.601856 TCAGTTTTGAACATTGATGTAATCCC 58.398 34.615 0.00 0.00 44.73 3.85
4914 5051 9.474920 TTTCAGTTTTGAACATTGATGTAATCC 57.525 29.630 0.00 0.00 42.07 3.01
4917 5054 9.868277 ACTTTTCAGTTTTGAACATTGATGTAA 57.132 25.926 0.00 0.00 42.79 2.41
4918 5055 9.868277 AACTTTTCAGTTTTGAACATTGATGTA 57.132 25.926 0.00 0.00 40.66 2.29
4919 5056 8.776376 AACTTTTCAGTTTTGAACATTGATGT 57.224 26.923 0.00 0.00 40.66 3.06
4920 5057 8.871862 TGAACTTTTCAGTTTTGAACATTGATG 58.128 29.630 0.00 0.00 43.79 3.07
4921 5058 9.434420 TTGAACTTTTCAGTTTTGAACATTGAT 57.566 25.926 0.00 0.00 43.79 2.57
4922 5059 8.824159 TTGAACTTTTCAGTTTTGAACATTGA 57.176 26.923 0.00 0.00 43.79 2.57
4925 5062 9.657419 AGATTTGAACTTTTCAGTTTTGAACAT 57.343 25.926 0.00 0.00 43.79 2.71
4929 5066 9.787532 CACTAGATTTGAACTTTTCAGTTTTGA 57.212 29.630 0.00 0.00 43.79 2.69
4930 5067 8.534778 GCACTAGATTTGAACTTTTCAGTTTTG 58.465 33.333 0.00 0.00 43.79 2.44
4931 5068 8.470002 AGCACTAGATTTGAACTTTTCAGTTTT 58.530 29.630 0.00 0.00 43.79 2.43
4932 5069 8.000780 AGCACTAGATTTGAACTTTTCAGTTT 57.999 30.769 0.00 0.00 43.79 2.66
4933 5070 7.573968 AGCACTAGATTTGAACTTTTCAGTT 57.426 32.000 0.00 0.00 46.64 3.16
4934 5071 7.255277 GGAAGCACTAGATTTGAACTTTTCAGT 60.255 37.037 0.00 0.00 41.38 3.41
4935 5072 7.040823 AGGAAGCACTAGATTTGAACTTTTCAG 60.041 37.037 0.00 0.00 41.38 3.02
4936 5073 6.772716 AGGAAGCACTAGATTTGAACTTTTCA 59.227 34.615 0.00 0.00 38.04 2.69
4937 5074 7.208225 AGGAAGCACTAGATTTGAACTTTTC 57.792 36.000 0.00 0.00 0.00 2.29
4938 5075 7.588497 AAGGAAGCACTAGATTTGAACTTTT 57.412 32.000 0.00 0.00 0.00 2.27
4939 5076 8.329203 CTAAGGAAGCACTAGATTTGAACTTT 57.671 34.615 0.00 0.00 0.00 2.66
4940 5077 7.913674 CTAAGGAAGCACTAGATTTGAACTT 57.086 36.000 0.00 0.00 0.00 2.66
4956 5093 1.667724 CACATCGGCTTGCTAAGGAAG 59.332 52.381 0.00 0.00 0.00 3.46
4957 5094 1.737838 CACATCGGCTTGCTAAGGAA 58.262 50.000 0.00 0.00 0.00 3.36
4958 5095 0.744414 GCACATCGGCTTGCTAAGGA 60.744 55.000 0.00 0.00 35.74 3.36
4959 5096 1.026182 TGCACATCGGCTTGCTAAGG 61.026 55.000 4.97 0.00 39.62 2.69
4960 5097 0.376152 CTGCACATCGGCTTGCTAAG 59.624 55.000 4.97 0.00 39.62 2.18
4961 5098 1.647545 GCTGCACATCGGCTTGCTAA 61.648 55.000 0.00 0.00 43.74 3.09
4962 5099 2.108514 GCTGCACATCGGCTTGCTA 61.109 57.895 0.00 0.00 43.74 3.49
4963 5100 3.437795 GCTGCACATCGGCTTGCT 61.438 61.111 0.00 0.00 43.74 3.91
4964 5101 4.487412 GGCTGCACATCGGCTTGC 62.487 66.667 0.50 0.00 46.32 4.01
4965 5102 4.170062 CGGCTGCACATCGGCTTG 62.170 66.667 0.50 0.00 46.32 4.01
4966 5103 3.687321 ATCGGCTGCACATCGGCTT 62.687 57.895 0.50 0.00 46.32 4.35
4967 5104 3.687321 AATCGGCTGCACATCGGCT 62.687 57.895 0.50 0.00 46.32 5.52
4968 5105 1.436195 TAAATCGGCTGCACATCGGC 61.436 55.000 0.50 0.00 46.38 5.54
4969 5106 0.583438 CTAAATCGGCTGCACATCGG 59.417 55.000 0.50 0.00 0.00 4.18
4970 5107 1.570813 TCTAAATCGGCTGCACATCG 58.429 50.000 0.50 0.00 0.00 3.84
4971 5108 3.304257 CCATTCTAAATCGGCTGCACATC 60.304 47.826 0.50 0.00 0.00 3.06
4972 5109 2.620115 CCATTCTAAATCGGCTGCACAT 59.380 45.455 0.50 0.00 0.00 3.21
4973 5110 2.016318 CCATTCTAAATCGGCTGCACA 58.984 47.619 0.50 0.00 0.00 4.57
4974 5111 1.268743 GCCATTCTAAATCGGCTGCAC 60.269 52.381 0.50 0.00 41.50 4.57
4975 5112 1.024271 GCCATTCTAAATCGGCTGCA 58.976 50.000 0.50 0.00 41.50 4.41
4976 5113 0.040958 CGCCATTCTAAATCGGCTGC 60.041 55.000 0.00 0.00 42.59 5.25
4977 5114 0.588252 CCGCCATTCTAAATCGGCTG 59.412 55.000 0.00 0.00 42.59 4.85
4978 5115 3.006672 CCGCCATTCTAAATCGGCT 57.993 52.632 0.00 0.00 42.59 5.52
4980 5117 0.817634 TGGCCGCCATTCTAAATCGG 60.818 55.000 8.43 0.00 42.68 4.18
4981 5118 0.588252 CTGGCCGCCATTCTAAATCG 59.412 55.000 13.86 0.00 30.82 3.34
4982 5119 0.312102 GCTGGCCGCCATTCTAAATC 59.688 55.000 13.86 0.00 30.82 2.17
4983 5120 0.395586 TGCTGGCCGCCATTCTAAAT 60.396 50.000 13.86 0.00 38.05 1.40
4984 5121 0.610509 TTGCTGGCCGCCATTCTAAA 60.611 50.000 13.86 0.54 38.05 1.85
4985 5122 0.610509 TTTGCTGGCCGCCATTCTAA 60.611 50.000 13.86 8.39 38.05 2.10
4986 5123 1.001517 TTTGCTGGCCGCCATTCTA 60.002 52.632 13.86 2.23 38.05 2.10
4987 5124 2.283101 TTTGCTGGCCGCCATTCT 60.283 55.556 13.86 0.00 38.05 2.40
4988 5125 2.125952 GTTTGCTGGCCGCCATTC 60.126 61.111 13.86 8.68 38.05 2.67
4989 5126 2.601367 AGTTTGCTGGCCGCCATT 60.601 55.556 13.86 0.00 38.05 3.16
4990 5127 3.376078 CAGTTTGCTGGCCGCCAT 61.376 61.111 13.86 0.00 39.01 4.40
4998 5135 3.368739 GGGATTCCAATTCCAGTTTGCTG 60.369 47.826 4.80 0.00 42.22 4.41
4999 5136 2.833943 GGGATTCCAATTCCAGTTTGCT 59.166 45.455 4.80 0.00 33.95 3.91
5000 5137 2.833943 AGGGATTCCAATTCCAGTTTGC 59.166 45.455 4.80 0.00 36.44 3.68
5001 5138 4.284234 ACAAGGGATTCCAATTCCAGTTTG 59.716 41.667 4.80 0.00 36.44 2.93
5002 5139 4.284234 CACAAGGGATTCCAATTCCAGTTT 59.716 41.667 4.80 0.00 36.44 2.66
5003 5140 3.834231 CACAAGGGATTCCAATTCCAGTT 59.166 43.478 4.80 0.00 36.44 3.16
5004 5141 3.075882 TCACAAGGGATTCCAATTCCAGT 59.924 43.478 4.80 0.00 36.44 4.00
5005 5142 3.445096 GTCACAAGGGATTCCAATTCCAG 59.555 47.826 4.80 0.00 36.44 3.86
5006 5143 3.075882 AGTCACAAGGGATTCCAATTCCA 59.924 43.478 4.80 0.00 36.44 3.53
5007 5144 3.701664 AGTCACAAGGGATTCCAATTCC 58.298 45.455 4.80 0.00 33.95 3.01
5008 5145 4.524328 ACAAGTCACAAGGGATTCCAATTC 59.476 41.667 4.80 0.00 34.83 2.17
5009 5146 4.281688 CACAAGTCACAAGGGATTCCAATT 59.718 41.667 4.80 0.00 34.83 2.32
5010 5147 3.828451 CACAAGTCACAAGGGATTCCAAT 59.172 43.478 4.80 0.00 34.83 3.16
5011 5148 3.221771 CACAAGTCACAAGGGATTCCAA 58.778 45.455 4.80 0.00 34.83 3.53
5012 5149 2.174639 ACACAAGTCACAAGGGATTCCA 59.825 45.455 4.80 0.00 34.83 3.53
5013 5150 2.814336 GACACAAGTCACAAGGGATTCC 59.186 50.000 0.00 0.00 44.34 3.01
5030 5167 6.735529 GAGAAACTCTCGTGTGTTCTGACAC 61.736 48.000 5.51 2.86 43.62 3.67
5031 5168 3.130516 AGAAACTCTCGTGTGTTCTGACA 59.869 43.478 5.51 0.00 0.00 3.58
5032 5169 3.707793 AGAAACTCTCGTGTGTTCTGAC 58.292 45.455 5.51 0.26 0.00 3.51
5033 5170 3.966154 GAGAAACTCTCGTGTGTTCTGA 58.034 45.455 5.51 0.00 33.35 3.27
5045 5182 8.766476 TGGATCATCTAAAATGAGAGAAACTCT 58.234 33.333 0.67 0.67 44.28 3.24
5046 5183 8.954950 TGGATCATCTAAAATGAGAGAAACTC 57.045 34.615 0.00 0.00 45.11 3.01
5047 5184 9.171877 GTTGGATCATCTAAAATGAGAGAAACT 57.828 33.333 0.00 0.00 0.00 2.66
5048 5185 8.401709 GGTTGGATCATCTAAAATGAGAGAAAC 58.598 37.037 0.00 0.00 0.00 2.78
5049 5186 8.108999 TGGTTGGATCATCTAAAATGAGAGAAA 58.891 33.333 0.00 0.00 0.00 2.52
5050 5187 7.632861 TGGTTGGATCATCTAAAATGAGAGAA 58.367 34.615 0.00 0.00 0.00 2.87
5051 5188 7.199167 TGGTTGGATCATCTAAAATGAGAGA 57.801 36.000 0.00 0.00 0.00 3.10
5052 5189 7.555554 AGTTGGTTGGATCATCTAAAATGAGAG 59.444 37.037 0.00 0.00 0.00 3.20
5053 5190 7.405292 AGTTGGTTGGATCATCTAAAATGAGA 58.595 34.615 0.00 0.00 0.00 3.27
5054 5191 7.636150 AGTTGGTTGGATCATCTAAAATGAG 57.364 36.000 0.00 0.00 0.00 2.90
5055 5192 7.577426 GCAAGTTGGTTGGATCATCTAAAATGA 60.577 37.037 4.75 0.00 36.56 2.57
5056 5193 6.532657 GCAAGTTGGTTGGATCATCTAAAATG 59.467 38.462 4.75 0.00 36.56 2.32
5057 5194 6.211184 TGCAAGTTGGTTGGATCATCTAAAAT 59.789 34.615 4.75 0.00 36.56 1.82
5058 5195 5.538053 TGCAAGTTGGTTGGATCATCTAAAA 59.462 36.000 4.75 0.00 36.56 1.52
5059 5196 5.076182 TGCAAGTTGGTTGGATCATCTAAA 58.924 37.500 4.75 0.00 36.56 1.85
5060 5197 4.661222 TGCAAGTTGGTTGGATCATCTAA 58.339 39.130 4.75 0.00 36.56 2.10
5061 5198 4.299586 TGCAAGTTGGTTGGATCATCTA 57.700 40.909 4.75 0.00 36.56 1.98
5062 5199 3.159213 TGCAAGTTGGTTGGATCATCT 57.841 42.857 4.75 0.00 36.56 2.90
5063 5200 3.429822 CCATGCAAGTTGGTTGGATCATC 60.430 47.826 4.75 0.00 43.29 2.92
5064 5201 2.498481 CCATGCAAGTTGGTTGGATCAT 59.502 45.455 4.75 0.00 43.29 2.45
5065 5202 1.894466 CCATGCAAGTTGGTTGGATCA 59.106 47.619 4.75 0.00 43.29 2.92
5066 5203 1.895131 ACCATGCAAGTTGGTTGGATC 59.105 47.619 4.57 0.00 43.29 3.36
5068 5205 1.039068 CACCATGCAAGTTGGTTGGA 58.961 50.000 7.76 0.00 45.19 3.53
5069 5206 1.000060 CTCACCATGCAAGTTGGTTGG 60.000 52.381 7.76 3.15 45.19 3.77
5070 5207 1.000060 CCTCACCATGCAAGTTGGTTG 60.000 52.381 7.76 4.60 45.19 3.77
5071 5208 1.331214 CCTCACCATGCAAGTTGGTT 58.669 50.000 7.76 0.00 45.19 3.67
5073 5210 2.198827 TACCTCACCATGCAAGTTGG 57.801 50.000 4.75 3.18 40.26 3.77
5074 5211 3.084039 ACATACCTCACCATGCAAGTTG 58.916 45.455 0.00 0.00 0.00 3.16
5075 5212 3.347216 GACATACCTCACCATGCAAGTT 58.653 45.455 0.00 0.00 0.00 2.66
5076 5213 2.677902 CGACATACCTCACCATGCAAGT 60.678 50.000 0.00 0.00 0.00 3.16
5077 5214 1.935873 CGACATACCTCACCATGCAAG 59.064 52.381 0.00 0.00 0.00 4.01
5078 5215 1.277842 ACGACATACCTCACCATGCAA 59.722 47.619 0.00 0.00 0.00 4.08
5079 5216 0.901827 ACGACATACCTCACCATGCA 59.098 50.000 0.00 0.00 0.00 3.96
5080 5217 1.290203 CACGACATACCTCACCATGC 58.710 55.000 0.00 0.00 0.00 4.06
5081 5218 1.939974 CCACGACATACCTCACCATG 58.060 55.000 0.00 0.00 0.00 3.66
5082 5219 0.178068 GCCACGACATACCTCACCAT 59.822 55.000 0.00 0.00 0.00 3.55
5083 5220 1.594833 GCCACGACATACCTCACCA 59.405 57.895 0.00 0.00 0.00 4.17
5084 5221 1.153429 GGCCACGACATACCTCACC 60.153 63.158 0.00 0.00 0.00 4.02
5085 5222 0.249398 AAGGCCACGACATACCTCAC 59.751 55.000 5.01 0.00 0.00 3.51
5086 5223 0.535335 GAAGGCCACGACATACCTCA 59.465 55.000 5.01 0.00 0.00 3.86
5087 5224 0.179081 GGAAGGCCACGACATACCTC 60.179 60.000 5.01 0.00 0.00 3.85
5088 5225 0.617820 AGGAAGGCCACGACATACCT 60.618 55.000 5.01 0.00 36.29 3.08
5089 5226 1.117150 TAGGAAGGCCACGACATACC 58.883 55.000 5.01 0.00 36.29 2.73
5090 5227 2.607282 CGATAGGAAGGCCACGACATAC 60.607 54.545 5.01 0.00 36.29 2.39
5091 5228 1.611977 CGATAGGAAGGCCACGACATA 59.388 52.381 5.01 0.00 36.29 2.29
5092 5229 0.389391 CGATAGGAAGGCCACGACAT 59.611 55.000 5.01 0.00 36.29 3.06
5093 5230 0.968901 ACGATAGGAAGGCCACGACA 60.969 55.000 5.01 0.00 43.77 4.35
5094 5231 0.527817 CACGATAGGAAGGCCACGAC 60.528 60.000 5.01 0.00 43.77 4.34
5095 5232 1.672854 CCACGATAGGAAGGCCACGA 61.673 60.000 5.01 0.00 43.77 4.35
5096 5233 1.227263 CCACGATAGGAAGGCCACG 60.227 63.158 5.01 1.28 43.77 4.94
5097 5234 0.759346 ATCCACGATAGGAAGGCCAC 59.241 55.000 5.01 0.00 41.92 5.01
5098 5235 0.758734 CATCCACGATAGGAAGGCCA 59.241 55.000 5.01 0.00 41.92 5.36
5099 5236 0.759346 ACATCCACGATAGGAAGGCC 59.241 55.000 0.00 0.00 41.92 5.19
5100 5237 2.213499 CAACATCCACGATAGGAAGGC 58.787 52.381 0.00 0.00 41.92 4.35
5101 5238 3.543680 ACAACATCCACGATAGGAAGG 57.456 47.619 0.00 0.00 41.92 3.46
5102 5239 4.332819 GGAAACAACATCCACGATAGGAAG 59.667 45.833 0.00 0.00 41.92 3.46
5103 5240 4.258543 GGAAACAACATCCACGATAGGAA 58.741 43.478 0.00 0.00 41.92 3.36
5104 5241 3.262151 TGGAAACAACATCCACGATAGGA 59.738 43.478 0.00 0.00 41.98 2.94
5105 5242 3.605634 TGGAAACAACATCCACGATAGG 58.394 45.455 0.00 0.00 41.98 2.57
5106 5243 4.330074 GTCTGGAAACAACATCCACGATAG 59.670 45.833 0.00 0.00 41.98 2.08
5107 5244 4.250464 GTCTGGAAACAACATCCACGATA 58.750 43.478 0.00 0.00 41.98 2.92
5108 5245 3.074412 GTCTGGAAACAACATCCACGAT 58.926 45.455 0.00 0.00 41.98 3.73
5109 5246 2.158885 TGTCTGGAAACAACATCCACGA 60.159 45.455 0.00 0.00 41.98 4.35
5110 5247 2.217750 TGTCTGGAAACAACATCCACG 58.782 47.619 0.00 0.00 41.98 4.94
5111 5248 6.515272 AATATGTCTGGAAACAACATCCAC 57.485 37.500 0.00 0.00 41.98 4.02
5112 5249 7.537596 AAAATATGTCTGGAAACAACATCCA 57.462 32.000 0.00 0.00 44.58 3.41
5134 5271 4.460382 GCACTCTCTCCCATTGATGAAAAA 59.540 41.667 0.00 0.00 0.00 1.94
5135 5272 4.012374 GCACTCTCTCCCATTGATGAAAA 58.988 43.478 0.00 0.00 0.00 2.29
5136 5273 3.009363 TGCACTCTCTCCCATTGATGAAA 59.991 43.478 0.00 0.00 0.00 2.69
5137 5274 2.573009 TGCACTCTCTCCCATTGATGAA 59.427 45.455 0.00 0.00 0.00 2.57
5138 5275 2.190538 TGCACTCTCTCCCATTGATGA 58.809 47.619 0.00 0.00 0.00 2.92
5139 5276 2.681848 GTTGCACTCTCTCCCATTGATG 59.318 50.000 0.00 0.00 0.00 3.07
5140 5277 2.679059 CGTTGCACTCTCTCCCATTGAT 60.679 50.000 0.00 0.00 0.00 2.57
5141 5278 1.338105 CGTTGCACTCTCTCCCATTGA 60.338 52.381 0.00 0.00 0.00 2.57
5142 5279 1.081892 CGTTGCACTCTCTCCCATTG 58.918 55.000 0.00 0.00 0.00 2.82
5143 5280 0.674895 GCGTTGCACTCTCTCCCATT 60.675 55.000 0.00 0.00 0.00 3.16
5144 5281 1.078848 GCGTTGCACTCTCTCCCAT 60.079 57.895 0.00 0.00 0.00 4.00
5145 5282 2.343758 GCGTTGCACTCTCTCCCA 59.656 61.111 0.00 0.00 0.00 4.37
5146 5283 2.435059 GGCGTTGCACTCTCTCCC 60.435 66.667 0.00 0.00 0.00 4.30
5147 5284 2.435059 GGGCGTTGCACTCTCTCC 60.435 66.667 0.00 0.00 0.00 3.71
5148 5285 2.435059 GGGGCGTTGCACTCTCTC 60.435 66.667 0.00 0.00 29.71 3.20
5149 5286 4.021925 GGGGGCGTTGCACTCTCT 62.022 66.667 0.00 0.00 29.71 3.10
5163 5300 2.087857 TTGGTAGGGCAACTTGGGGG 62.088 60.000 0.00 0.00 0.00 5.40
5164 5301 0.041090 ATTGGTAGGGCAACTTGGGG 59.959 55.000 0.00 0.00 0.00 4.96
5165 5302 1.272425 TGATTGGTAGGGCAACTTGGG 60.272 52.381 0.00 0.00 0.00 4.12
5166 5303 1.818674 GTGATTGGTAGGGCAACTTGG 59.181 52.381 0.00 0.00 0.00 3.61
5167 5304 2.513753 TGTGATTGGTAGGGCAACTTG 58.486 47.619 0.00 0.00 0.00 3.16
5168 5305 2.969821 TGTGATTGGTAGGGCAACTT 57.030 45.000 0.00 0.00 0.00 2.66
5169 5306 2.621407 CCATGTGATTGGTAGGGCAACT 60.621 50.000 0.00 0.00 31.74 3.16
5170 5307 1.750778 CCATGTGATTGGTAGGGCAAC 59.249 52.381 0.00 0.00 31.74 4.17
5171 5308 1.638070 TCCATGTGATTGGTAGGGCAA 59.362 47.619 0.00 0.00 38.01 4.52
5172 5309 1.212688 CTCCATGTGATTGGTAGGGCA 59.787 52.381 0.00 0.00 38.01 5.36
5173 5310 1.477558 CCTCCATGTGATTGGTAGGGC 60.478 57.143 0.00 0.00 38.01 5.19
5174 5311 1.477558 GCCTCCATGTGATTGGTAGGG 60.478 57.143 0.00 4.40 38.01 3.53
5175 5312 1.492176 AGCCTCCATGTGATTGGTAGG 59.508 52.381 0.00 0.00 38.01 3.18
5176 5313 2.171237 TCAGCCTCCATGTGATTGGTAG 59.829 50.000 0.00 0.00 38.01 3.18
5177 5314 2.171237 CTCAGCCTCCATGTGATTGGTA 59.829 50.000 0.00 0.00 38.01 3.25
5178 5315 0.994247 TCAGCCTCCATGTGATTGGT 59.006 50.000 0.00 0.00 38.01 3.67
5179 5316 1.676746 CTCAGCCTCCATGTGATTGG 58.323 55.000 0.00 0.00 38.18 3.16
5180 5317 1.022735 GCTCAGCCTCCATGTGATTG 58.977 55.000 0.00 0.00 0.00 2.67
5181 5318 0.106819 GGCTCAGCCTCCATGTGATT 60.107 55.000 9.09 0.00 46.69 2.57
5182 5319 1.530771 GGCTCAGCCTCCATGTGAT 59.469 57.895 9.09 0.00 46.69 3.06
5183 5320 2.993008 GGCTCAGCCTCCATGTGA 59.007 61.111 9.09 0.00 46.69 3.58
5192 5329 4.437958 CTCCTCAGAGATTGGCTCAGCC 62.438 59.091 9.54 9.54 46.45 4.85
5193 5330 0.829333 TCCTCAGAGATTGGCTCAGC 59.171 55.000 0.00 0.00 46.45 4.26
5194 5331 1.413445 CCTCCTCAGAGATTGGCTCAG 59.587 57.143 0.00 0.00 46.45 3.35
5195 5332 1.273495 ACCTCCTCAGAGATTGGCTCA 60.273 52.381 0.00 0.00 46.45 4.26
5196 5333 1.494960 ACCTCCTCAGAGATTGGCTC 58.505 55.000 0.00 0.00 43.39 4.70
5197 5334 1.836802 GAACCTCCTCAGAGATTGGCT 59.163 52.381 0.00 0.00 43.39 4.75
5198 5335 1.134250 GGAACCTCCTCAGAGATTGGC 60.134 57.143 0.00 0.00 43.39 4.52
5199 5336 2.191400 TGGAACCTCCTCAGAGATTGG 58.809 52.381 0.00 0.47 43.39 3.16
5200 5337 3.988976 TTGGAACCTCCTCAGAGATTG 57.011 47.619 0.00 0.00 43.39 2.67
5201 5338 5.504853 GAATTTGGAACCTCCTCAGAGATT 58.495 41.667 0.00 0.00 43.39 2.40
5202 5339 5.109500 GAATTTGGAACCTCCTCAGAGAT 57.891 43.478 0.00 0.00 43.39 2.75
5203 5340 4.559862 GAATTTGGAACCTCCTCAGAGA 57.440 45.455 0.00 0.00 43.39 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.