Multiple sequence alignment - TraesCS1B01G221100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G221100 chr1B 100.000 3783 0 0 1 3783 398004999 398008781 0.000000e+00 6986.0
1 TraesCS1B01G221100 chr1D 95.719 2219 62 17 775 2981 296488980 296491177 0.000000e+00 3541.0
2 TraesCS1B01G221100 chr1D 95.798 595 25 0 29 623 296488049 296488643 0.000000e+00 961.0
3 TraesCS1B01G221100 chr1D 87.027 185 19 5 3449 3632 296492167 296492347 1.780000e-48 204.0
4 TraesCS1B01G221100 chr1D 88.172 93 3 2 657 741 296488643 296488735 1.860000e-18 104.0
5 TraesCS1B01G221100 chr1D 92.063 63 3 2 2975 3036 296491638 296491699 1.870000e-13 87.9
6 TraesCS1B01G221100 chr1A 94.151 2274 100 20 784 3044 369322445 369324698 0.000000e+00 3432.0
7 TraesCS1B01G221100 chr1A 91.020 490 23 7 250 728 369321938 369322417 3.190000e-180 641.0
8 TraesCS1B01G221100 chr1A 78.727 550 115 2 1020 1568 243162851 243162303 2.150000e-97 366.0
9 TraesCS1B01G221100 chr1A 91.216 148 11 2 29 176 369321791 369321936 2.300000e-47 200.0
10 TraesCS1B01G221100 chr1A 89.333 75 7 1 816 889 369322005 369322079 4.020000e-15 93.5
11 TraesCS1B01G221100 chr5A 83.445 1190 162 23 1000 2185 688973614 688974772 0.000000e+00 1074.0
12 TraesCS1B01G221100 chr5A 85.606 264 38 0 2501 2764 688975388 688975651 1.030000e-70 278.0
13 TraesCS1B01G221100 chr4D 83.165 1188 169 18 1000 2185 504328846 504330004 0.000000e+00 1057.0
14 TraesCS1B01G221100 chr4D 83.406 229 23 9 420 639 92544722 92544500 8.290000e-47 198.0
15 TraesCS1B01G221100 chr4B 82.927 1189 170 22 1000 2185 650960771 650961929 0.000000e+00 1040.0
16 TraesCS1B01G221100 chr4B 88.258 264 31 0 2501 2764 650962539 650962802 2.190000e-82 316.0
17 TraesCS1B01G221100 chr4B 81.356 354 51 9 420 762 130215921 130215572 1.340000e-69 274.0
18 TraesCS1B01G221100 chr6B 80.201 596 110 8 1021 1612 706910969 706911560 1.250000e-119 440.0
19 TraesCS1B01G221100 chr6B 95.364 151 7 0 3633 3783 658195256 658195406 1.360000e-59 241.0
20 TraesCS1B01G221100 chr6B 83.146 178 25 5 2492 2666 706912897 706913072 1.410000e-34 158.0
21 TraesCS1B01G221100 chr6D 80.000 595 111 8 1022 1612 463549412 463548822 2.090000e-117 433.0
22 TraesCS1B01G221100 chr6A 79.798 594 114 6 1022 1612 610203852 610204442 9.710000e-116 427.0
23 TraesCS1B01G221100 chr6A 91.954 87 5 1 449 535 33170467 33170551 1.850000e-23 121.0
24 TraesCS1B01G221100 chr7B 89.103 156 13 4 3631 3783 60911696 60911542 1.390000e-44 191.0
25 TraesCS1B01G221100 chr7B 85.350 157 20 3 3630 3783 632326720 632326564 3.910000e-35 159.0
26 TraesCS1B01G221100 chr7B 79.730 222 37 4 412 628 548259549 548259767 1.820000e-33 154.0
27 TraesCS1B01G221100 chr7B 83.133 83 9 4 3525 3602 105027686 105027768 1.890000e-08 71.3
28 TraesCS1B01G221100 chr7B 85.484 62 9 0 3289 3350 15581183 15581244 8.770000e-07 65.8
29 TraesCS1B01G221100 chr5B 88.387 155 17 1 3630 3783 15038678 15038832 6.450000e-43 185.0
30 TraesCS1B01G221100 chr7A 90.370 135 12 1 3650 3783 717901753 717901887 3.880000e-40 176.0
31 TraesCS1B01G221100 chr2D 81.646 158 26 3 3629 3783 566764393 566764550 1.100000e-25 128.0
32 TraesCS1B01G221100 chr3B 85.833 120 12 5 401 518 828925193 828925077 5.130000e-24 122.0
33 TraesCS1B01G221100 chr2A 83.333 96 10 6 3531 3623 182690894 182690802 2.420000e-12 84.2
34 TraesCS1B01G221100 chr2A 77.778 117 18 7 3523 3632 442714327 442714442 8.770000e-07 65.8
35 TraesCS1B01G221100 chr5D 92.105 38 3 0 3545 3582 304373668 304373631 2.000000e-03 54.7
36 TraesCS1B01G221100 chr7D 94.286 35 1 1 51 84 33469248 33469282 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G221100 chr1B 398004999 398008781 3782 False 6986.000 6986 100.0000 1 3783 1 chr1B.!!$F1 3782
1 TraesCS1B01G221100 chr1D 296488049 296492347 4298 False 979.580 3541 91.7558 29 3632 5 chr1D.!!$F1 3603
2 TraesCS1B01G221100 chr1A 369321791 369324698 2907 False 1091.625 3432 91.4300 29 3044 4 chr1A.!!$F1 3015
3 TraesCS1B01G221100 chr1A 243162303 243162851 548 True 366.000 366 78.7270 1020 1568 1 chr1A.!!$R1 548
4 TraesCS1B01G221100 chr5A 688973614 688975651 2037 False 676.000 1074 84.5255 1000 2764 2 chr5A.!!$F1 1764
5 TraesCS1B01G221100 chr4D 504328846 504330004 1158 False 1057.000 1057 83.1650 1000 2185 1 chr4D.!!$F1 1185
6 TraesCS1B01G221100 chr4B 650960771 650962802 2031 False 678.000 1040 85.5925 1000 2764 2 chr4B.!!$F1 1764
7 TraesCS1B01G221100 chr6B 706910969 706913072 2103 False 299.000 440 81.6735 1021 2666 2 chr6B.!!$F2 1645
8 TraesCS1B01G221100 chr6D 463548822 463549412 590 True 433.000 433 80.0000 1022 1612 1 chr6D.!!$R1 590
9 TraesCS1B01G221100 chr6A 610203852 610204442 590 False 427.000 427 79.7980 1022 1612 1 chr6A.!!$F2 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 293 0.382158 TCTCGCTAAGGCATGTCTCG 59.618 55.0 0.00 0.0 38.6 4.04 F
956 1228 0.593618 TAGCAGCTGGATCGATCGAC 59.406 55.0 22.06 14.0 0.0 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2250 3088 0.094046 GTACGTACATGCACAACGGC 59.906 55.0 20.67 9.25 40.81 5.68 R
2844 4248 0.249531 TGCAGCGGTTCGTCAACTTA 60.250 50.0 0.00 0.00 32.50 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.091261 AGCCTATTTCAAGAGTTCATCGT 57.909 39.130 0.00 0.00 0.00 3.73
23 24 4.872691 AGCCTATTTCAAGAGTTCATCGTG 59.127 41.667 0.00 0.00 38.61 4.35
24 25 4.034510 GCCTATTTCAAGAGTTCATCGTGG 59.965 45.833 0.00 0.00 37.91 4.94
25 26 5.178797 CCTATTTCAAGAGTTCATCGTGGT 58.821 41.667 0.00 0.00 37.91 4.16
26 27 6.338146 CCTATTTCAAGAGTTCATCGTGGTA 58.662 40.000 0.00 0.00 37.91 3.25
27 28 6.477033 CCTATTTCAAGAGTTCATCGTGGTAG 59.523 42.308 0.00 0.00 37.91 3.18
45 46 3.433598 GGTAGGATATTGTGCCTGCTCAA 60.434 47.826 8.83 8.83 37.12 3.02
55 56 5.494390 TGTGCCTGCTCAATATATCTGAT 57.506 39.130 0.00 0.00 0.00 2.90
95 96 3.748568 TGTGCATGCGTGTGTTTATAAGA 59.251 39.130 14.09 0.00 0.00 2.10
115 116 4.990257 AGATTGAGTGTATGTGCATTTGC 58.010 39.130 0.00 0.00 42.50 3.68
124 125 3.846423 ATGTGCATTTGCGATTGTACA 57.154 38.095 18.23 18.23 45.83 2.90
167 168 8.970691 ATTGCAATATTTAGACGAAATATGCC 57.029 30.769 11.02 13.16 45.90 4.40
230 231 3.474600 ACGTAGTGAGTAGTGAGTGTGT 58.525 45.455 0.00 0.00 42.51 3.72
292 293 0.382158 TCTCGCTAAGGCATGTCTCG 59.618 55.000 0.00 0.00 38.60 4.04
347 348 1.445582 GTCGTGCAACTAGGTCGGG 60.446 63.158 0.00 0.00 31.75 5.14
423 424 6.441093 TCAATTCCATGCAAAGACTATCAC 57.559 37.500 0.00 0.00 0.00 3.06
587 588 7.903995 TTTATTTCATGCAATTGGAAGGAAC 57.096 32.000 14.19 0.00 0.00 3.62
623 624 9.482175 AGTAGTTTCCTAGAAGTATCATTGAGT 57.518 33.333 0.00 0.00 0.00 3.41
624 625 9.522804 GTAGTTTCCTAGAAGTATCATTGAGTG 57.477 37.037 0.00 0.00 0.00 3.51
625 626 8.367660 AGTTTCCTAGAAGTATCATTGAGTGA 57.632 34.615 0.00 0.00 42.06 3.41
626 627 8.816894 AGTTTCCTAGAAGTATCATTGAGTGAA 58.183 33.333 0.00 0.00 40.97 3.18
627 628 9.436957 GTTTCCTAGAAGTATCATTGAGTGAAA 57.563 33.333 0.00 0.00 40.97 2.69
628 629 9.658799 TTTCCTAGAAGTATCATTGAGTGAAAG 57.341 33.333 0.00 0.00 40.97 2.62
629 630 8.595362 TCCTAGAAGTATCATTGAGTGAAAGA 57.405 34.615 0.00 0.00 40.97 2.52
630 631 8.470805 TCCTAGAAGTATCATTGAGTGAAAGAC 58.529 37.037 0.00 0.00 40.97 3.01
631 632 8.474025 CCTAGAAGTATCATTGAGTGAAAGACT 58.526 37.037 0.00 0.00 40.97 3.24
634 635 9.030452 AGAAGTATCATTGAGTGAAAGACTACT 57.970 33.333 0.00 0.00 40.97 2.57
635 636 9.296400 GAAGTATCATTGAGTGAAAGACTACTC 57.704 37.037 0.00 0.00 40.97 2.59
636 637 7.777095 AGTATCATTGAGTGAAAGACTACTCC 58.223 38.462 0.00 0.00 41.99 3.85
637 638 6.611613 ATCATTGAGTGAAAGACTACTCCA 57.388 37.500 0.00 0.00 41.99 3.86
638 639 6.611613 TCATTGAGTGAAAGACTACTCCAT 57.388 37.500 0.00 0.00 41.99 3.41
639 640 7.718334 TCATTGAGTGAAAGACTACTCCATA 57.282 36.000 0.00 0.00 41.99 2.74
640 641 8.311395 TCATTGAGTGAAAGACTACTCCATAT 57.689 34.615 0.00 0.00 41.99 1.78
641 642 8.200120 TCATTGAGTGAAAGACTACTCCATATG 58.800 37.037 0.00 0.00 41.99 1.78
642 643 6.471233 TGAGTGAAAGACTACTCCATATGG 57.529 41.667 16.25 16.25 41.99 2.74
643 644 5.363868 TGAGTGAAAGACTACTCCATATGGG 59.636 44.000 21.78 14.30 41.99 4.00
644 645 4.101741 AGTGAAAGACTACTCCATATGGGC 59.898 45.833 21.78 0.00 31.69 5.36
645 646 4.037222 TGAAAGACTACTCCATATGGGCA 58.963 43.478 21.78 2.24 36.21 5.36
646 647 4.101585 TGAAAGACTACTCCATATGGGCAG 59.898 45.833 21.78 14.67 36.21 4.85
647 648 2.614259 AGACTACTCCATATGGGCAGG 58.386 52.381 21.78 11.95 36.21 4.85
648 649 2.090494 AGACTACTCCATATGGGCAGGT 60.090 50.000 21.78 14.80 36.21 4.00
649 650 2.300437 GACTACTCCATATGGGCAGGTC 59.700 54.545 21.78 18.61 36.21 3.85
650 651 2.090494 ACTACTCCATATGGGCAGGTCT 60.090 50.000 21.78 0.19 36.21 3.85
651 652 1.135094 ACTCCATATGGGCAGGTCTG 58.865 55.000 21.78 5.00 36.21 3.51
652 653 1.135094 CTCCATATGGGCAGGTCTGT 58.865 55.000 21.78 0.00 36.21 3.41
653 654 2.329267 CTCCATATGGGCAGGTCTGTA 58.671 52.381 21.78 0.00 36.21 2.74
654 655 2.301296 CTCCATATGGGCAGGTCTGTAG 59.699 54.545 21.78 3.75 36.21 2.74
655 656 1.271054 CCATATGGGCAGGTCTGTAGC 60.271 57.143 14.52 0.00 0.00 3.58
711 756 7.597743 TCAATTAGTTCGTACAAAGAAGACCTC 59.402 37.037 0.00 0.00 0.00 3.85
797 1061 1.505353 CCGACCGTGAGTGTACCTC 59.495 63.158 4.84 4.84 40.89 3.85
899 1169 1.039233 CGAGTACTTAAGCCCCGGGA 61.039 60.000 26.32 0.00 0.00 5.14
900 1170 1.421480 GAGTACTTAAGCCCCGGGAT 58.579 55.000 26.32 10.67 0.00 3.85
954 1226 0.732196 GCTAGCAGCTGGATCGATCG 60.732 60.000 18.81 9.36 38.45 3.69
956 1228 0.593618 TAGCAGCTGGATCGATCGAC 59.406 55.000 22.06 14.00 0.00 4.20
975 1251 3.846360 GACCACCCAGTCGCATATATAC 58.154 50.000 0.00 0.00 0.00 1.47
1527 1803 2.709213 GCCTTCAACAGCAAGATCTCT 58.291 47.619 0.00 0.00 0.00 3.10
1749 2301 1.591703 GATGCTGGTCCAGTCGTCA 59.408 57.895 20.24 9.84 33.43 4.35
1786 2338 2.571757 GCCACGACTCGGTGATGA 59.428 61.111 2.98 0.00 40.38 2.92
2070 2908 2.547123 ATAAGACGGGGCTCCCTGGT 62.547 60.000 17.58 9.85 46.47 4.00
2185 3023 0.668401 CTCCAACGTACCAACCGGTC 60.668 60.000 8.04 0.00 44.71 4.79
2197 3035 2.226437 CCAACCGGTCAGTGAATTCTTG 59.774 50.000 8.04 5.67 0.00 3.02
2242 3080 4.758674 ACACACTACACTGTACGTATCACT 59.241 41.667 0.00 0.00 0.00 3.41
2243 3081 5.240183 ACACACTACACTGTACGTATCACTT 59.760 40.000 0.00 0.00 0.00 3.16
2244 3082 5.567915 CACACTACACTGTACGTATCACTTG 59.432 44.000 0.00 0.54 0.00 3.16
2245 3083 4.557690 CACTACACTGTACGTATCACTTGC 59.442 45.833 0.00 0.00 0.00 4.01
2246 3084 2.592194 ACACTGTACGTATCACTTGCG 58.408 47.619 0.00 0.00 39.57 4.85
2250 3088 3.036633 CTGTACGTATCACTTGCGCTAG 58.963 50.000 17.44 17.44 36.86 3.42
2252 3090 0.527817 ACGTATCACTTGCGCTAGCC 60.528 55.000 18.90 2.49 44.33 3.93
2253 3091 1.540607 CGTATCACTTGCGCTAGCCG 61.541 60.000 18.90 10.39 44.33 5.52
2263 3113 2.390599 CGCTAGCCGTTGTGCATGT 61.391 57.895 9.66 0.00 0.00 3.21
2269 3119 0.094046 GCCGTTGTGCATGTACGTAC 59.906 55.000 18.90 18.90 33.68 3.67
2270 3120 0.364180 CCGTTGTGCATGTACGTACG 59.636 55.000 24.27 24.27 33.68 3.67
2271 3121 1.054574 CGTTGTGCATGTACGTACGT 58.945 50.000 25.98 25.98 31.13 3.57
2273 3123 2.655948 CGTTGTGCATGTACGTACGTAA 59.344 45.455 28.34 18.52 31.86 3.18
2276 3126 3.236005 TGTGCATGTACGTACGTAACAG 58.764 45.455 28.34 20.26 31.86 3.16
2277 3127 3.236816 GTGCATGTACGTACGTAACAGT 58.763 45.455 28.34 12.48 31.86 3.55
2278 3128 4.083590 TGTGCATGTACGTACGTAACAGTA 60.084 41.667 28.34 16.92 31.86 2.74
2279 3129 4.493350 GTGCATGTACGTACGTAACAGTAG 59.507 45.833 28.34 19.82 31.86 2.57
2281 3131 5.350091 TGCATGTACGTACGTAACAGTAGTA 59.650 40.000 28.34 17.05 31.86 1.82
2283 3133 6.571520 GCATGTACGTACGTAACAGTAGTATC 59.428 42.308 28.34 13.00 31.86 2.24
2284 3134 7.517417 GCATGTACGTACGTAACAGTAGTATCT 60.517 40.741 28.34 9.37 31.86 1.98
2285 3135 7.221828 TGTACGTACGTAACAGTAGTATCTG 57.778 40.000 28.34 0.00 40.80 2.90
2286 3136 5.149054 ACGTACGTAACAGTAGTATCTGC 57.851 43.478 21.41 0.00 38.84 4.26
2287 3137 4.199331 CGTACGTAACAGTAGTATCTGCG 58.801 47.826 7.22 0.00 38.84 5.18
2288 3138 4.259970 CGTACGTAACAGTAGTATCTGCGT 60.260 45.833 7.22 0.00 38.84 5.24
2423 3604 3.067040 TGTGCCGTACATATATGTCGTGT 59.933 43.478 21.49 1.25 41.97 4.49
2484 3665 7.517614 TTTGGCAATTACTAACTGACATGAA 57.482 32.000 0.00 0.00 0.00 2.57
2509 3913 0.239347 GTGTGGTTCATGCAGTGCTC 59.761 55.000 17.60 1.85 0.00 4.26
2822 4226 9.872684 AATTATTAGTACTACTACTACCAGCCA 57.127 33.333 0.91 0.00 35.54 4.75
2823 4227 9.872684 ATTATTAGTACTACTACTACCAGCCAA 57.127 33.333 0.91 0.00 35.54 4.52
2824 4228 9.872684 TTATTAGTACTACTACTACCAGCCAAT 57.127 33.333 0.91 0.00 35.54 3.16
2844 4248 5.179368 CCAATACATGCCGATCGAAAGTTAT 59.821 40.000 18.66 4.79 0.00 1.89
2878 4282 4.393062 ACCGCTGCATGCTCAATTATATAC 59.607 41.667 20.33 0.00 40.11 1.47
2926 4331 6.444633 TCCACGATCGAGTAGAAATATTTCC 58.555 40.000 24.34 9.85 37.92 3.13
2933 4338 9.332301 GATCGAGTAGAAATATTTCCGAAGTAG 57.668 37.037 22.39 13.67 37.92 2.57
2934 4339 8.218338 TCGAGTAGAAATATTTCCGAAGTAGT 57.782 34.615 21.86 11.63 37.92 2.73
2935 4340 9.330063 TCGAGTAGAAATATTTCCGAAGTAGTA 57.670 33.333 21.86 5.26 37.92 1.82
2984 4856 8.879342 AACTCTGAAGTCTGTTACATATATGC 57.121 34.615 12.79 0.00 33.48 3.14
3025 4897 8.798748 ACTGATAATTAGTAAGCATCGTACAC 57.201 34.615 0.00 0.00 0.00 2.90
3044 4916 0.807667 CAGAGGTATCAGCGTGCACC 60.808 60.000 12.15 4.10 0.00 5.01
3045 4917 0.972983 AGAGGTATCAGCGTGCACCT 60.973 55.000 12.15 6.64 44.11 4.00
3047 4919 1.136305 GAGGTATCAGCGTGCACCTAA 59.864 52.381 12.15 0.00 41.49 2.69
3048 4920 1.134788 AGGTATCAGCGTGCACCTAAC 60.135 52.381 12.15 8.27 39.64 2.34
3049 4921 1.404986 GGTATCAGCGTGCACCTAACA 60.405 52.381 12.15 0.00 0.00 2.41
3050 4922 1.659098 GTATCAGCGTGCACCTAACAC 59.341 52.381 12.15 4.39 34.62 3.32
3051 4923 0.034756 ATCAGCGTGCACCTAACACA 59.965 50.000 12.15 0.00 37.93 3.72
3052 4924 0.034756 TCAGCGTGCACCTAACACAT 59.965 50.000 12.15 0.00 37.93 3.21
3053 4925 0.443869 CAGCGTGCACCTAACACATC 59.556 55.000 12.15 0.00 37.93 3.06
3054 4926 0.034756 AGCGTGCACCTAACACATCA 59.965 50.000 12.15 0.00 37.93 3.07
3055 4927 1.086696 GCGTGCACCTAACACATCAT 58.913 50.000 12.15 0.00 37.93 2.45
3056 4928 1.062587 GCGTGCACCTAACACATCATC 59.937 52.381 12.15 0.00 37.93 2.92
3057 4929 1.665679 CGTGCACCTAACACATCATCC 59.334 52.381 12.15 0.00 37.93 3.51
3058 4930 1.665679 GTGCACCTAACACATCATCCG 59.334 52.381 5.22 0.00 37.96 4.18
3059 4931 0.657840 GCACCTAACACATCATCCGC 59.342 55.000 0.00 0.00 0.00 5.54
3060 4932 1.743772 GCACCTAACACATCATCCGCT 60.744 52.381 0.00 0.00 0.00 5.52
3063 4935 1.134401 CCTAACACATCATCCGCTGGT 60.134 52.381 0.00 0.00 0.00 4.00
3065 4937 3.244215 CCTAACACATCATCCGCTGGTAT 60.244 47.826 0.00 0.00 0.00 2.73
3066 4938 3.281727 AACACATCATCCGCTGGTATT 57.718 42.857 0.00 0.00 0.00 1.89
3067 4939 3.281727 ACACATCATCCGCTGGTATTT 57.718 42.857 0.00 0.00 0.00 1.40
3070 4942 4.100963 ACACATCATCCGCTGGTATTTAGA 59.899 41.667 0.00 0.00 0.00 2.10
3071 4943 4.687948 CACATCATCCGCTGGTATTTAGAG 59.312 45.833 0.00 0.00 0.00 2.43
3072 4944 3.386768 TCATCCGCTGGTATTTAGAGC 57.613 47.619 0.00 0.00 0.00 4.09
3073 4945 2.698274 TCATCCGCTGGTATTTAGAGCA 59.302 45.455 0.00 0.00 32.70 4.26
3074 4946 3.133901 TCATCCGCTGGTATTTAGAGCAA 59.866 43.478 0.00 0.00 32.70 3.91
3075 4947 3.179443 TCCGCTGGTATTTAGAGCAAG 57.821 47.619 0.00 0.00 32.70 4.01
3076 4948 2.500098 TCCGCTGGTATTTAGAGCAAGT 59.500 45.455 0.00 0.00 32.70 3.16
3077 4949 3.702548 TCCGCTGGTATTTAGAGCAAGTA 59.297 43.478 0.00 0.00 32.70 2.24
3078 4950 3.802685 CCGCTGGTATTTAGAGCAAGTAC 59.197 47.826 0.00 0.00 32.70 2.73
3080 4952 4.267928 CGCTGGTATTTAGAGCAAGTACAC 59.732 45.833 0.00 0.00 32.42 2.90
3082 4954 6.570692 GCTGGTATTTAGAGCAAGTACACTA 58.429 40.000 0.00 0.00 32.42 2.74
3083 4955 6.697892 GCTGGTATTTAGAGCAAGTACACTAG 59.302 42.308 0.00 0.00 32.42 2.57
3084 4956 7.416438 GCTGGTATTTAGAGCAAGTACACTAGA 60.416 40.741 0.00 0.00 32.42 2.43
3085 4957 7.997482 TGGTATTTAGAGCAAGTACACTAGAG 58.003 38.462 0.00 0.00 32.42 2.43
3099 4971 2.458620 ACTAGAGTGACTTAGGTGGGC 58.541 52.381 0.00 0.00 0.00 5.36
3100 4972 2.043252 ACTAGAGTGACTTAGGTGGGCT 59.957 50.000 0.00 0.00 0.00 5.19
3101 4973 2.921834 AGAGTGACTTAGGTGGGCTA 57.078 50.000 0.00 0.00 0.00 3.93
3102 4974 3.406512 AGAGTGACTTAGGTGGGCTAT 57.593 47.619 0.00 0.00 0.00 2.97
3106 4978 5.724854 AGAGTGACTTAGGTGGGCTATAAAA 59.275 40.000 0.00 0.00 0.00 1.52
3108 4980 5.724854 AGTGACTTAGGTGGGCTATAAAAGA 59.275 40.000 0.00 0.00 0.00 2.52
3109 4981 6.387220 AGTGACTTAGGTGGGCTATAAAAGAT 59.613 38.462 0.00 0.00 0.00 2.40
3110 4982 6.483640 GTGACTTAGGTGGGCTATAAAAGATG 59.516 42.308 0.00 0.00 0.00 2.90
3111 4983 6.157994 TGACTTAGGTGGGCTATAAAAGATGT 59.842 38.462 0.00 0.00 0.00 3.06
3114 4986 4.781934 AGGTGGGCTATAAAAGATGTCAC 58.218 43.478 0.00 0.00 0.00 3.67
3116 4988 5.103940 AGGTGGGCTATAAAAGATGTCACAT 60.104 40.000 0.00 0.00 0.00 3.21
3117 4989 5.239525 GGTGGGCTATAAAAGATGTCACATC 59.760 44.000 10.05 10.05 0.00 3.06
3118 4990 5.050091 GTGGGCTATAAAAGATGTCACATCG 60.050 44.000 12.25 0.00 0.00 3.84
3119 4991 4.083802 GGGCTATAAAAGATGTCACATCGC 60.084 45.833 12.25 7.49 0.00 4.58
3120 4992 4.511454 GGCTATAAAAGATGTCACATCGCA 59.489 41.667 12.25 0.00 0.00 5.10
3121 4993 5.180117 GGCTATAAAAGATGTCACATCGCAT 59.820 40.000 12.25 6.87 0.00 4.73
3122 4994 6.293626 GGCTATAAAAGATGTCACATCGCATT 60.294 38.462 12.25 10.72 0.00 3.56
3123 4995 7.134815 GCTATAAAAGATGTCACATCGCATTT 58.865 34.615 12.25 15.60 0.00 2.32
3124 4996 8.282592 GCTATAAAAGATGTCACATCGCATTTA 58.717 33.333 19.70 19.70 0.00 1.40
3145 5017 9.322773 CATTTATGCATAGTTGAAAGAGAGAGA 57.677 33.333 6.50 0.00 0.00 3.10
3146 5018 9.896645 ATTTATGCATAGTTGAAAGAGAGAGAA 57.103 29.630 6.50 0.00 0.00 2.87
3147 5019 8.939201 TTATGCATAGTTGAAAGAGAGAGAAG 57.061 34.615 6.50 0.00 0.00 2.85
3148 5020 6.596309 TGCATAGTTGAAAGAGAGAGAAGA 57.404 37.500 0.00 0.00 0.00 2.87
3149 5021 6.997655 TGCATAGTTGAAAGAGAGAGAAGAA 58.002 36.000 0.00 0.00 0.00 2.52
3150 5022 7.445121 TGCATAGTTGAAAGAGAGAGAAGAAA 58.555 34.615 0.00 0.00 0.00 2.52
3151 5023 7.933577 TGCATAGTTGAAAGAGAGAGAAGAAAA 59.066 33.333 0.00 0.00 0.00 2.29
3154 5026 9.927668 ATAGTTGAAAGAGAGAGAAGAAAAGAG 57.072 33.333 0.00 0.00 0.00 2.85
3155 5027 8.017418 AGTTGAAAGAGAGAGAAGAAAAGAGA 57.983 34.615 0.00 0.00 0.00 3.10
3156 5028 8.482128 AGTTGAAAGAGAGAGAAGAAAAGAGAA 58.518 33.333 0.00 0.00 0.00 2.87
3157 5029 8.764287 GTTGAAAGAGAGAGAAGAAAAGAGAAG 58.236 37.037 0.00 0.00 0.00 2.85
3158 5030 6.928492 TGAAAGAGAGAGAAGAAAAGAGAAGC 59.072 38.462 0.00 0.00 0.00 3.86
3159 5031 5.059404 AGAGAGAGAAGAAAAGAGAAGCG 57.941 43.478 0.00 0.00 0.00 4.68
3160 5032 4.082245 AGAGAGAGAAGAAAAGAGAAGCGG 60.082 45.833 0.00 0.00 0.00 5.52
3161 5033 3.056179 AGAGAGAAGAAAAGAGAAGCGGG 60.056 47.826 0.00 0.00 0.00 6.13
3163 5035 3.071747 AGAGAAGAAAAGAGAAGCGGGTT 59.928 43.478 0.00 0.00 0.00 4.11
3164 5036 3.142174 AGAAGAAAAGAGAAGCGGGTTG 58.858 45.455 0.00 0.00 0.00 3.77
3165 5037 1.239347 AGAAAAGAGAAGCGGGTTGC 58.761 50.000 0.00 0.00 46.98 4.17
3172 5044 4.413928 AAGCGGGTTGCATGCTTA 57.586 50.000 20.33 3.93 46.40 3.09
3173 5045 2.886382 AAGCGGGTTGCATGCTTAT 58.114 47.368 20.33 0.00 46.40 1.73
3174 5046 2.051334 AAGCGGGTTGCATGCTTATA 57.949 45.000 20.33 0.00 46.40 0.98
3175 5047 1.949525 AAGCGGGTTGCATGCTTATAG 59.050 47.619 20.33 8.82 46.40 1.31
3178 5050 0.593128 GGGTTGCATGCTTATAGCCG 59.407 55.000 20.33 0.00 41.51 5.52
3179 5051 0.593128 GGTTGCATGCTTATAGCCGG 59.407 55.000 20.33 0.00 41.51 6.13
3181 5053 2.154462 GTTGCATGCTTATAGCCGGAT 58.846 47.619 20.33 0.00 41.51 4.18
3182 5054 1.812235 TGCATGCTTATAGCCGGATG 58.188 50.000 20.33 0.00 41.51 3.51
3183 5055 1.072173 TGCATGCTTATAGCCGGATGT 59.928 47.619 20.33 0.00 41.51 3.06
3184 5056 2.301583 TGCATGCTTATAGCCGGATGTA 59.698 45.455 20.33 0.00 41.51 2.29
3186 5058 3.372206 GCATGCTTATAGCCGGATGTAAG 59.628 47.826 26.40 26.40 41.51 2.34
3188 5060 4.252971 TGCTTATAGCCGGATGTAAGAC 57.747 45.455 32.43 24.13 41.51 3.01
3189 5061 3.639561 TGCTTATAGCCGGATGTAAGACA 59.360 43.478 32.43 25.89 41.51 3.41
3190 5062 4.100344 TGCTTATAGCCGGATGTAAGACAA 59.900 41.667 32.43 17.76 41.51 3.18
3191 5063 4.686554 GCTTATAGCCGGATGTAAGACAAG 59.313 45.833 32.43 14.49 34.48 3.16
3192 5064 5.509163 GCTTATAGCCGGATGTAAGACAAGA 60.509 44.000 32.43 1.35 34.48 3.02
3193 5065 2.674796 AGCCGGATGTAAGACAAGAC 57.325 50.000 5.05 0.00 0.00 3.01
3194 5066 1.207329 AGCCGGATGTAAGACAAGACC 59.793 52.381 5.05 0.00 0.00 3.85
3195 5067 1.742750 GCCGGATGTAAGACAAGACCC 60.743 57.143 5.05 0.00 0.00 4.46
3196 5068 1.470979 CCGGATGTAAGACAAGACCCG 60.471 57.143 0.00 0.00 0.00 5.28
3198 5070 2.734492 CGGATGTAAGACAAGACCCGAC 60.734 54.545 0.00 0.00 0.00 4.79
3202 5074 3.460103 TGTAAGACAAGACCCGACAAAC 58.540 45.455 0.00 0.00 0.00 2.93
3203 5075 3.133362 TGTAAGACAAGACCCGACAAACT 59.867 43.478 0.00 0.00 0.00 2.66
3204 5076 3.277142 AAGACAAGACCCGACAAACTT 57.723 42.857 0.00 0.00 0.00 2.66
3205 5077 3.277142 AGACAAGACCCGACAAACTTT 57.723 42.857 0.00 0.00 0.00 2.66
3208 5080 2.422127 ACAAGACCCGACAAACTTTGTG 59.578 45.455 11.97 4.85 45.52 3.33
3209 5081 2.680841 CAAGACCCGACAAACTTTGTGA 59.319 45.455 11.97 0.00 45.52 3.58
3210 5082 2.561569 AGACCCGACAAACTTTGTGAG 58.438 47.619 11.97 5.93 45.52 3.51
3211 5083 2.169769 AGACCCGACAAACTTTGTGAGA 59.830 45.455 11.97 0.00 45.52 3.27
3212 5084 2.544267 GACCCGACAAACTTTGTGAGAG 59.456 50.000 11.97 0.17 45.52 3.20
3217 5089 5.392595 CCCGACAAACTTTGTGAGAGAAAAA 60.393 40.000 11.97 0.00 45.52 1.94
3219 5091 6.403200 CCGACAAACTTTGTGAGAGAAAAAGA 60.403 38.462 11.97 0.00 45.52 2.52
3220 5092 7.189512 CGACAAACTTTGTGAGAGAAAAAGAT 58.810 34.615 11.97 0.00 45.52 2.40
3225 5097 9.803315 AAACTTTGTGAGAGAAAAAGATAAACC 57.197 29.630 1.67 0.00 35.39 3.27
3226 5098 8.519799 ACTTTGTGAGAGAAAAAGATAAACCA 57.480 30.769 1.67 0.00 35.39 3.67
3227 5099 9.136323 ACTTTGTGAGAGAAAAAGATAAACCAT 57.864 29.630 1.67 0.00 35.39 3.55
3275 5147 8.267894 AGTATAACAGATATTGTATGGATGGGC 58.732 37.037 0.00 0.00 39.73 5.36
3276 5148 5.589367 AACAGATATTGTATGGATGGGCT 57.411 39.130 0.00 0.00 39.73 5.19
3277 5149 6.702449 AACAGATATTGTATGGATGGGCTA 57.298 37.500 0.00 0.00 39.73 3.93
3279 5151 7.276088 ACAGATATTGTATGGATGGGCTATT 57.724 36.000 0.00 0.00 38.56 1.73
3280 5152 8.392631 ACAGATATTGTATGGATGGGCTATTA 57.607 34.615 0.00 0.00 38.56 0.98
3281 5153 8.489489 ACAGATATTGTATGGATGGGCTATTAG 58.511 37.037 0.00 0.00 38.56 1.73
3282 5154 7.935755 CAGATATTGTATGGATGGGCTATTAGG 59.064 40.741 0.00 0.00 0.00 2.69
3283 5155 7.629315 AGATATTGTATGGATGGGCTATTAGGT 59.371 37.037 0.00 0.00 0.00 3.08
3284 5156 5.922960 TTGTATGGATGGGCTATTAGGTT 57.077 39.130 0.00 0.00 0.00 3.50
3285 5157 5.241403 TGTATGGATGGGCTATTAGGTTG 57.759 43.478 0.00 0.00 0.00 3.77
3286 5158 3.814504 ATGGATGGGCTATTAGGTTGG 57.185 47.619 0.00 0.00 0.00 3.77
3289 5161 4.048600 TGGATGGGCTATTAGGTTGGTTA 58.951 43.478 0.00 0.00 0.00 2.85
3291 5163 5.852807 TGGATGGGCTATTAGGTTGGTTATA 59.147 40.000 0.00 0.00 0.00 0.98
3292 5164 6.333168 TGGATGGGCTATTAGGTTGGTTATAA 59.667 38.462 0.00 0.00 0.00 0.98
3294 5166 7.893833 GGATGGGCTATTAGGTTGGTTATAAAT 59.106 37.037 0.00 0.00 0.00 1.40
3296 5168 7.817440 TGGGCTATTAGGTTGGTTATAAATGA 58.183 34.615 0.00 0.00 0.00 2.57
3297 5169 7.722285 TGGGCTATTAGGTTGGTTATAAATGAC 59.278 37.037 0.00 0.00 0.00 3.06
3298 5170 7.094933 GGGCTATTAGGTTGGTTATAAATGACG 60.095 40.741 0.00 0.00 0.00 4.35
3299 5171 7.443272 GGCTATTAGGTTGGTTATAAATGACGT 59.557 37.037 0.00 0.00 0.00 4.34
3300 5172 8.280497 GCTATTAGGTTGGTTATAAATGACGTG 58.720 37.037 0.00 0.00 0.00 4.49
3301 5173 4.957759 AGGTTGGTTATAAATGACGTGC 57.042 40.909 0.00 0.00 0.00 5.34
3303 5175 3.440872 GGTTGGTTATAAATGACGTGCCA 59.559 43.478 0.00 0.00 0.00 4.92
3305 5177 4.688511 TGGTTATAAATGACGTGCCAAC 57.311 40.909 0.00 0.00 0.00 3.77
3307 5179 4.393680 TGGTTATAAATGACGTGCCAACTC 59.606 41.667 0.00 0.00 0.00 3.01
3308 5180 4.201881 GGTTATAAATGACGTGCCAACTCC 60.202 45.833 0.00 0.00 0.00 3.85
3310 5182 1.909700 AAATGACGTGCCAACTCCAT 58.090 45.000 0.00 0.00 0.00 3.41
3312 5184 3.281727 AATGACGTGCCAACTCCATAT 57.718 42.857 0.00 0.00 0.00 1.78
3313 5185 4.415881 AATGACGTGCCAACTCCATATA 57.584 40.909 0.00 0.00 0.00 0.86
3314 5186 3.897141 TGACGTGCCAACTCCATATAA 57.103 42.857 0.00 0.00 0.00 0.98
3315 5187 3.527533 TGACGTGCCAACTCCATATAAC 58.472 45.455 0.00 0.00 0.00 1.89
3317 5189 1.864711 CGTGCCAACTCCATATAACCG 59.135 52.381 0.00 0.00 0.00 4.44
3318 5190 2.482316 CGTGCCAACTCCATATAACCGA 60.482 50.000 0.00 0.00 0.00 4.69
3321 5193 3.181469 TGCCAACTCCATATAACCGACTC 60.181 47.826 0.00 0.00 0.00 3.36
3322 5194 3.069729 GCCAACTCCATATAACCGACTCT 59.930 47.826 0.00 0.00 0.00 3.24
3323 5195 4.443034 GCCAACTCCATATAACCGACTCTT 60.443 45.833 0.00 0.00 0.00 2.85
3325 5197 5.163447 CCAACTCCATATAACCGACTCTTGA 60.163 44.000 0.00 0.00 0.00 3.02
3326 5198 5.517322 ACTCCATATAACCGACTCTTGAC 57.483 43.478 0.00 0.00 0.00 3.18
3327 5199 5.202004 ACTCCATATAACCGACTCTTGACT 58.798 41.667 0.00 0.00 0.00 3.41
3328 5200 6.363065 ACTCCATATAACCGACTCTTGACTA 58.637 40.000 0.00 0.00 0.00 2.59
3329 5201 7.005296 ACTCCATATAACCGACTCTTGACTAT 58.995 38.462 0.00 0.00 0.00 2.12
3330 5202 8.162085 ACTCCATATAACCGACTCTTGACTATA 58.838 37.037 0.00 0.00 0.00 1.31
3331 5203 8.332996 TCCATATAACCGACTCTTGACTATAC 57.667 38.462 0.00 0.00 0.00 1.47
3332 5204 8.162085 TCCATATAACCGACTCTTGACTATACT 58.838 37.037 0.00 0.00 0.00 2.12
3333 5205 9.445878 CCATATAACCGACTCTTGACTATACTA 57.554 37.037 0.00 0.00 0.00 1.82
3339 5211 8.164058 ACCGACTCTTGACTATACTATTAACC 57.836 38.462 0.00 0.00 0.00 2.85
3346 5266 9.368416 TCTTGACTATACTATTAACCATGCTCT 57.632 33.333 0.00 0.00 0.00 4.09
3357 5277 7.814264 ATTAACCATGCTCTTATCTTTCCTG 57.186 36.000 0.00 0.00 0.00 3.86
3366 5286 5.255397 TCTTATCTTTCCTGGCCTTCAAA 57.745 39.130 3.32 0.00 0.00 2.69
3377 5297 4.261197 CCTGGCCTTCAAATTAGCGTAATC 60.261 45.833 3.32 0.00 0.00 1.75
3378 5298 3.311322 TGGCCTTCAAATTAGCGTAATCG 59.689 43.478 3.32 0.00 40.37 3.34
3379 5299 3.311596 GGCCTTCAAATTAGCGTAATCGT 59.688 43.478 0.00 0.00 39.49 3.73
3380 5300 4.515432 GCCTTCAAATTAGCGTAATCGTC 58.485 43.478 0.00 0.00 39.49 4.20
3381 5301 4.552184 GCCTTCAAATTAGCGTAATCGTCC 60.552 45.833 0.00 0.00 39.49 4.79
3382 5302 4.569162 CCTTCAAATTAGCGTAATCGTCCA 59.431 41.667 0.00 0.00 39.49 4.02
3384 5304 4.751060 TCAAATTAGCGTAATCGTCCAGT 58.249 39.130 0.00 0.00 39.49 4.00
3387 5307 3.853831 TTAGCGTAATCGTCCAGTTGA 57.146 42.857 0.00 0.00 39.49 3.18
3389 5309 1.271379 AGCGTAATCGTCCAGTTGACA 59.729 47.619 0.00 0.00 44.71 3.58
3390 5310 1.389106 GCGTAATCGTCCAGTTGACAC 59.611 52.381 0.00 0.00 44.71 3.67
3391 5311 2.925306 GCGTAATCGTCCAGTTGACACT 60.925 50.000 0.00 0.00 44.71 3.55
3403 5332 0.107831 TTGACACTAGCCCACCACAC 59.892 55.000 0.00 0.00 0.00 3.82
3408 5337 1.139058 CACTAGCCCACCACACTATCC 59.861 57.143 0.00 0.00 0.00 2.59
3409 5338 1.273609 ACTAGCCCACCACACTATCCA 60.274 52.381 0.00 0.00 0.00 3.41
3412 5341 1.847798 GCCCACCACACTATCCACCA 61.848 60.000 0.00 0.00 0.00 4.17
3414 5343 1.408683 CCCACCACACTATCCACCATG 60.409 57.143 0.00 0.00 0.00 3.66
3416 5345 0.991146 ACCACACTATCCACCATGCA 59.009 50.000 0.00 0.00 0.00 3.96
3417 5346 1.354031 ACCACACTATCCACCATGCAA 59.646 47.619 0.00 0.00 0.00 4.08
3418 5347 2.025037 ACCACACTATCCACCATGCAAT 60.025 45.455 0.00 0.00 0.00 3.56
3420 5349 3.565482 CCACACTATCCACCATGCAATAC 59.435 47.826 0.00 0.00 0.00 1.89
3421 5350 3.565482 CACACTATCCACCATGCAATACC 59.435 47.826 0.00 0.00 0.00 2.73
3422 5351 3.201930 ACACTATCCACCATGCAATACCA 59.798 43.478 0.00 0.00 0.00 3.25
3424 5353 4.828939 CACTATCCACCATGCAATACCAAT 59.171 41.667 0.00 0.00 0.00 3.16
3425 5354 5.302568 CACTATCCACCATGCAATACCAATT 59.697 40.000 0.00 0.00 0.00 2.32
3426 5355 4.942761 ATCCACCATGCAATACCAATTC 57.057 40.909 0.00 0.00 0.00 2.17
3427 5356 3.979911 TCCACCATGCAATACCAATTCT 58.020 40.909 0.00 0.00 0.00 2.40
3429 5358 3.956199 CCACCATGCAATACCAATTCTCT 59.044 43.478 0.00 0.00 0.00 3.10
3430 5359 5.104151 TCCACCATGCAATACCAATTCTCTA 60.104 40.000 0.00 0.00 0.00 2.43
3431 5360 5.771666 CCACCATGCAATACCAATTCTCTAT 59.228 40.000 0.00 0.00 0.00 1.98
3433 5362 7.365741 CACCATGCAATACCAATTCTCTATTC 58.634 38.462 0.00 0.00 0.00 1.75
3434 5363 6.205464 ACCATGCAATACCAATTCTCTATTCG 59.795 38.462 0.00 0.00 0.00 3.34
3435 5364 6.348786 CCATGCAATACCAATTCTCTATTCGG 60.349 42.308 0.00 0.00 0.00 4.30
3436 5365 5.063204 TGCAATACCAATTCTCTATTCGGG 58.937 41.667 0.00 0.00 0.00 5.14
3437 5366 5.163248 TGCAATACCAATTCTCTATTCGGGA 60.163 40.000 0.00 0.00 0.00 5.14
3438 5367 5.409826 GCAATACCAATTCTCTATTCGGGAG 59.590 44.000 0.00 0.00 0.00 4.30
3440 5369 7.667557 CAATACCAATTCTCTATTCGGGAGTA 58.332 38.462 0.00 0.00 33.06 2.59
3441 5370 5.793030 ACCAATTCTCTATTCGGGAGTAG 57.207 43.478 0.00 0.00 33.06 2.57
3442 5371 4.039366 ACCAATTCTCTATTCGGGAGTAGC 59.961 45.833 0.00 0.00 33.06 3.58
3444 5373 5.221541 CCAATTCTCTATTCGGGAGTAGCTT 60.222 44.000 0.00 0.00 33.06 3.74
3445 5374 5.715434 ATTCTCTATTCGGGAGTAGCTTC 57.285 43.478 0.00 0.00 33.06 3.86
3446 5375 4.166246 TCTCTATTCGGGAGTAGCTTCA 57.834 45.455 0.00 0.00 33.06 3.02
3447 5376 4.533815 TCTCTATTCGGGAGTAGCTTCAA 58.466 43.478 0.00 0.00 33.06 2.69
3458 5387 5.920840 GGGAGTAGCTTCAATTGTTTGTTTC 59.079 40.000 5.13 0.00 34.32 2.78
3459 5388 5.625311 GGAGTAGCTTCAATTGTTTGTTTCG 59.375 40.000 5.13 0.00 34.32 3.46
3465 5394 6.253512 AGCTTCAATTGTTTGTTTCGTTCTTC 59.746 34.615 5.13 0.00 34.32 2.87
3466 5395 6.034470 GCTTCAATTGTTTGTTTCGTTCTTCA 59.966 34.615 5.13 0.00 34.32 3.02
3475 5404 7.272515 TGTTTGTTTCGTTCTTCAGTTTTCATC 59.727 33.333 0.00 0.00 0.00 2.92
3477 5406 4.725556 TTCGTTCTTCAGTTTTCATCGG 57.274 40.909 0.00 0.00 0.00 4.18
3567 5496 8.259872 CGTTGTACATTTCTCGTATACATCAAG 58.740 37.037 3.32 0.00 0.00 3.02
3659 5588 2.843081 AGGGTTTTCCTAGGGTCTACC 58.157 52.381 9.46 11.24 45.98 3.18
3660 5589 2.389620 AGGGTTTTCCTAGGGTCTACCT 59.610 50.000 9.46 9.04 45.98 3.08
3661 5590 2.770802 GGGTTTTCCTAGGGTCTACCTC 59.229 54.545 9.46 3.22 42.82 3.85
3662 5591 3.568333 GGGTTTTCCTAGGGTCTACCTCT 60.568 52.174 9.46 0.00 42.82 3.69
3663 5592 5.067270 GGGTTTTCCTAGGGTCTACCTCTT 61.067 50.000 9.46 0.00 42.82 2.85
3664 5593 6.860555 GGGTTTTCCTAGGGTCTACCTCTTC 61.861 52.000 9.46 0.00 42.82 2.87
3670 5599 1.112950 GGGTCTACCTCTTCCTTCGG 58.887 60.000 0.00 0.00 35.85 4.30
3671 5600 0.460722 GGTCTACCTCTTCCTTCGGC 59.539 60.000 0.00 0.00 0.00 5.54
3672 5601 0.100861 GTCTACCTCTTCCTTCGGCG 59.899 60.000 0.00 0.00 0.00 6.46
3673 5602 1.035932 TCTACCTCTTCCTTCGGCGG 61.036 60.000 7.21 0.00 0.00 6.13
3674 5603 2.630592 CTACCTCTTCCTTCGGCGGC 62.631 65.000 7.21 0.00 0.00 6.53
3691 5620 2.664851 CGCCGCTGAAGTCCACAA 60.665 61.111 0.00 0.00 0.00 3.33
3692 5621 2.250939 CGCCGCTGAAGTCCACAAA 61.251 57.895 0.00 0.00 0.00 2.83
3693 5622 1.577328 CGCCGCTGAAGTCCACAAAT 61.577 55.000 0.00 0.00 0.00 2.32
3694 5623 0.598065 GCCGCTGAAGTCCACAAATT 59.402 50.000 0.00 0.00 0.00 1.82
3695 5624 1.401539 GCCGCTGAAGTCCACAAATTC 60.402 52.381 0.00 0.00 0.00 2.17
3696 5625 1.200020 CCGCTGAAGTCCACAAATTCC 59.800 52.381 0.00 0.00 0.00 3.01
3697 5626 1.200020 CGCTGAAGTCCACAAATTCCC 59.800 52.381 0.00 0.00 0.00 3.97
3698 5627 2.238521 GCTGAAGTCCACAAATTCCCA 58.761 47.619 0.00 0.00 0.00 4.37
3699 5628 2.029918 GCTGAAGTCCACAAATTCCCAC 60.030 50.000 0.00 0.00 0.00 4.61
3700 5629 2.226330 TGAAGTCCACAAATTCCCACG 58.774 47.619 0.00 0.00 0.00 4.94
3701 5630 2.227194 GAAGTCCACAAATTCCCACGT 58.773 47.619 0.00 0.00 0.00 4.49
3702 5631 1.604604 AGTCCACAAATTCCCACGTG 58.395 50.000 9.08 9.08 0.00 4.49
3703 5632 1.142060 AGTCCACAAATTCCCACGTGA 59.858 47.619 19.30 0.00 0.00 4.35
3704 5633 1.950909 GTCCACAAATTCCCACGTGAA 59.049 47.619 19.30 4.34 0.00 3.18
3705 5634 2.359531 GTCCACAAATTCCCACGTGAAA 59.640 45.455 19.30 11.47 0.00 2.69
3706 5635 3.024547 TCCACAAATTCCCACGTGAAAA 58.975 40.909 19.30 11.08 0.00 2.29
3707 5636 3.639094 TCCACAAATTCCCACGTGAAAAT 59.361 39.130 19.30 12.98 0.00 1.82
3708 5637 3.987220 CCACAAATTCCCACGTGAAAATC 59.013 43.478 19.30 0.00 0.00 2.17
3709 5638 3.668191 CACAAATTCCCACGTGAAAATCG 59.332 43.478 19.30 12.39 0.00 3.34
3710 5639 3.241701 CAAATTCCCACGTGAAAATCGG 58.758 45.455 19.30 8.65 0.00 4.18
3711 5640 0.808755 ATTCCCACGTGAAAATCGGC 59.191 50.000 19.30 0.00 0.00 5.54
3712 5641 1.238625 TTCCCACGTGAAAATCGGCC 61.239 55.000 19.30 0.00 0.00 6.13
3713 5642 2.478746 CCACGTGAAAATCGGCCG 59.521 61.111 22.12 22.12 0.00 6.13
3714 5643 2.478746 CACGTGAAAATCGGCCGG 59.521 61.111 27.83 8.96 0.00 6.13
3715 5644 2.030401 CACGTGAAAATCGGCCGGA 61.030 57.895 27.83 12.89 0.00 5.14
3716 5645 1.078708 ACGTGAAAATCGGCCGGAT 60.079 52.632 27.83 14.79 36.78 4.18
3718 5647 0.248054 CGTGAAAATCGGCCGGATTG 60.248 55.000 27.83 7.61 44.59 2.67
3719 5648 0.525455 GTGAAAATCGGCCGGATTGC 60.525 55.000 27.83 19.19 44.59 3.56
3720 5649 0.679640 TGAAAATCGGCCGGATTGCT 60.680 50.000 27.83 13.71 44.59 3.91
3721 5650 1.305201 GAAAATCGGCCGGATTGCTA 58.695 50.000 27.83 3.54 44.59 3.49
3722 5651 1.673920 GAAAATCGGCCGGATTGCTAA 59.326 47.619 27.83 2.60 44.59 3.09
3723 5652 1.308998 AAATCGGCCGGATTGCTAAG 58.691 50.000 27.83 0.00 44.59 2.18
3724 5653 1.166531 AATCGGCCGGATTGCTAAGC 61.167 55.000 27.83 0.00 43.70 3.09
3725 5654 3.640000 CGGCCGGATTGCTAAGCG 61.640 66.667 20.10 0.00 0.00 4.68
3726 5655 3.953887 GGCCGGATTGCTAAGCGC 61.954 66.667 5.05 0.00 39.77 5.92
3727 5656 2.897350 GCCGGATTGCTAAGCGCT 60.897 61.111 5.05 2.64 40.11 5.92
3728 5657 2.472909 GCCGGATTGCTAAGCGCTT 61.473 57.895 27.97 27.97 40.11 4.68
3729 5658 1.353103 CCGGATTGCTAAGCGCTTG 59.647 57.895 32.23 21.55 40.11 4.01
3730 5659 1.297893 CGGATTGCTAAGCGCTTGC 60.298 57.895 32.23 29.10 40.11 4.01
3740 5669 3.869272 GCGCTTGCTGGTGATCGG 61.869 66.667 0.00 0.00 35.07 4.18
3741 5670 3.197790 CGCTTGCTGGTGATCGGG 61.198 66.667 0.00 0.00 0.00 5.14
3742 5671 2.045926 GCTTGCTGGTGATCGGGT 60.046 61.111 0.00 0.00 0.00 5.28
3743 5672 2.109126 GCTTGCTGGTGATCGGGTC 61.109 63.158 0.00 0.00 0.00 4.46
3744 5673 1.811266 CTTGCTGGTGATCGGGTCG 60.811 63.158 0.00 0.00 0.00 4.79
3745 5674 2.507110 CTTGCTGGTGATCGGGTCGT 62.507 60.000 0.00 0.00 0.00 4.34
3746 5675 2.202756 GCTGGTGATCGGGTCGTC 60.203 66.667 0.00 0.00 0.00 4.20
3747 5676 2.494918 CTGGTGATCGGGTCGTCC 59.505 66.667 0.00 0.00 0.00 4.79
3756 5685 4.404098 GGGTCGTCCCGTGGCAAT 62.404 66.667 0.76 0.00 44.74 3.56
3757 5686 2.818274 GGTCGTCCCGTGGCAATC 60.818 66.667 0.00 0.00 0.00 2.67
3758 5687 3.186047 GTCGTCCCGTGGCAATCG 61.186 66.667 0.00 0.00 0.00 3.34
3759 5688 3.687102 TCGTCCCGTGGCAATCGT 61.687 61.111 0.00 0.00 0.00 3.73
3760 5689 3.186047 CGTCCCGTGGCAATCGTC 61.186 66.667 0.00 0.00 0.00 4.20
3761 5690 2.264794 GTCCCGTGGCAATCGTCT 59.735 61.111 0.00 0.00 0.00 4.18
3762 5691 1.375523 GTCCCGTGGCAATCGTCTT 60.376 57.895 0.00 0.00 0.00 3.01
3763 5692 1.375396 TCCCGTGGCAATCGTCTTG 60.375 57.895 0.00 0.00 0.00 3.02
3764 5693 2.398554 CCCGTGGCAATCGTCTTGG 61.399 63.158 0.00 0.00 0.00 3.61
3765 5694 1.671054 CCGTGGCAATCGTCTTGGT 60.671 57.895 0.00 0.00 0.00 3.67
3766 5695 0.390603 CCGTGGCAATCGTCTTGGTA 60.391 55.000 0.00 0.00 0.00 3.25
3767 5696 0.719465 CGTGGCAATCGTCTTGGTAC 59.281 55.000 0.00 0.00 0.00 3.34
3768 5697 1.803334 GTGGCAATCGTCTTGGTACA 58.197 50.000 0.00 0.00 0.00 2.90
3769 5698 1.463444 GTGGCAATCGTCTTGGTACAC 59.537 52.381 0.00 0.00 39.29 2.90
3770 5699 1.084289 GGCAATCGTCTTGGTACACC 58.916 55.000 0.00 0.00 39.29 4.16
3771 5700 0.719465 GCAATCGTCTTGGTACACCG 59.281 55.000 0.00 0.00 39.29 4.94
3772 5701 1.938016 GCAATCGTCTTGGTACACCGT 60.938 52.381 0.00 0.00 39.29 4.83
3773 5702 2.409975 CAATCGTCTTGGTACACCGTT 58.590 47.619 0.00 0.00 39.29 4.44
3774 5703 2.803956 CAATCGTCTTGGTACACCGTTT 59.196 45.455 0.00 0.00 39.29 3.60
3775 5704 1.855513 TCGTCTTGGTACACCGTTTG 58.144 50.000 0.00 0.00 39.29 2.93
3776 5705 0.233848 CGTCTTGGTACACCGTTTGC 59.766 55.000 0.00 0.00 39.29 3.68
3777 5706 1.301423 GTCTTGGTACACCGTTTGCA 58.699 50.000 0.00 0.00 39.29 4.08
3778 5707 1.877443 GTCTTGGTACACCGTTTGCAT 59.123 47.619 0.00 0.00 39.29 3.96
3779 5708 1.876799 TCTTGGTACACCGTTTGCATG 59.123 47.619 0.00 0.00 39.29 4.06
3780 5709 0.955178 TTGGTACACCGTTTGCATGG 59.045 50.000 0.00 0.00 39.29 3.66
3781 5710 0.108774 TGGTACACCGTTTGCATGGA 59.891 50.000 7.11 0.00 39.43 3.41
3782 5711 0.802494 GGTACACCGTTTGCATGGAG 59.198 55.000 7.11 2.18 32.58 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.872691 CACGATGAACTCTTGAAATAGGCT 59.127 41.667 0.00 0.00 0.00 4.58
1 2 4.034510 CCACGATGAACTCTTGAAATAGGC 59.965 45.833 0.00 0.00 0.00 3.93
2 3 5.178797 ACCACGATGAACTCTTGAAATAGG 58.821 41.667 0.00 0.00 0.00 2.57
3 4 6.477033 CCTACCACGATGAACTCTTGAAATAG 59.523 42.308 0.00 0.00 0.00 1.73
4 5 6.153851 TCCTACCACGATGAACTCTTGAAATA 59.846 38.462 0.00 0.00 0.00 1.40
5 6 5.046591 TCCTACCACGATGAACTCTTGAAAT 60.047 40.000 0.00 0.00 0.00 2.17
6 7 4.282449 TCCTACCACGATGAACTCTTGAAA 59.718 41.667 0.00 0.00 0.00 2.69
7 8 3.830178 TCCTACCACGATGAACTCTTGAA 59.170 43.478 0.00 0.00 0.00 2.69
8 9 3.427573 TCCTACCACGATGAACTCTTGA 58.572 45.455 0.00 0.00 0.00 3.02
9 10 3.868757 TCCTACCACGATGAACTCTTG 57.131 47.619 0.00 0.00 0.00 3.02
10 11 6.098409 ACAATATCCTACCACGATGAACTCTT 59.902 38.462 0.00 0.00 0.00 2.85
11 12 5.598830 ACAATATCCTACCACGATGAACTCT 59.401 40.000 0.00 0.00 0.00 3.24
12 13 5.692204 CACAATATCCTACCACGATGAACTC 59.308 44.000 0.00 0.00 0.00 3.01
13 14 5.601662 CACAATATCCTACCACGATGAACT 58.398 41.667 0.00 0.00 0.00 3.01
14 15 4.211374 GCACAATATCCTACCACGATGAAC 59.789 45.833 0.00 0.00 0.00 3.18
15 16 4.377021 GCACAATATCCTACCACGATGAA 58.623 43.478 0.00 0.00 0.00 2.57
16 17 3.244078 GGCACAATATCCTACCACGATGA 60.244 47.826 0.00 0.00 0.00 2.92
17 18 3.067106 GGCACAATATCCTACCACGATG 58.933 50.000 0.00 0.00 0.00 3.84
18 19 2.972713 AGGCACAATATCCTACCACGAT 59.027 45.455 0.00 0.00 0.00 3.73
19 20 2.102420 CAGGCACAATATCCTACCACGA 59.898 50.000 0.00 0.00 0.00 4.35
20 21 2.483876 CAGGCACAATATCCTACCACG 58.516 52.381 0.00 0.00 0.00 4.94
21 22 2.158755 AGCAGGCACAATATCCTACCAC 60.159 50.000 0.00 0.00 0.00 4.16
22 23 2.104792 GAGCAGGCACAATATCCTACCA 59.895 50.000 0.00 0.00 0.00 3.25
23 24 2.104792 TGAGCAGGCACAATATCCTACC 59.895 50.000 0.00 0.00 0.00 3.18
24 25 3.475566 TGAGCAGGCACAATATCCTAC 57.524 47.619 0.00 0.00 0.00 3.18
25 26 4.712051 ATTGAGCAGGCACAATATCCTA 57.288 40.909 13.93 0.00 35.94 2.94
26 27 3.589951 ATTGAGCAGGCACAATATCCT 57.410 42.857 13.93 0.00 35.94 3.24
27 28 7.012138 CAGATATATTGAGCAGGCACAATATCC 59.988 40.741 28.06 22.48 43.68 2.59
45 46 4.786994 ACCCCATGAGCACATCAGATATAT 59.213 41.667 0.00 0.00 42.53 0.86
55 56 0.904649 CACTCTACCCCATGAGCACA 59.095 55.000 0.00 0.00 33.92 4.57
95 96 3.439825 TCGCAAATGCACATACACTCAAT 59.560 39.130 6.18 0.00 42.21 2.57
167 168 9.331282 AGCTATTCAACTAAATAACCAGCTTAG 57.669 33.333 0.00 0.00 0.00 2.18
230 231 9.739276 CTAATGGGAGGAAAATATATGTGCTTA 57.261 33.333 0.00 0.00 0.00 3.09
292 293 1.374758 AGCCGTACTGAGCTTGCAC 60.375 57.895 0.00 0.00 35.22 4.57
347 348 1.731433 ATGCAGATGACGCCATTGGC 61.731 55.000 18.10 18.10 46.75 4.52
423 424 4.023536 GGAGAATACTGCTAGACTCGGAAG 60.024 50.000 0.00 0.00 0.00 3.46
587 588 8.457261 ACTTCTAGGAAACTACTATTGTGTACG 58.543 37.037 0.00 0.00 43.67 3.67
622 623 4.141711 TGCCCATATGGAGTAGTCTTTCAC 60.142 45.833 24.00 0.00 37.39 3.18
623 624 4.037222 TGCCCATATGGAGTAGTCTTTCA 58.963 43.478 24.00 1.83 37.39 2.69
624 625 4.503991 CCTGCCCATATGGAGTAGTCTTTC 60.504 50.000 24.00 0.00 37.39 2.62
625 626 3.392616 CCTGCCCATATGGAGTAGTCTTT 59.607 47.826 24.00 0.00 37.39 2.52
626 627 2.975489 CCTGCCCATATGGAGTAGTCTT 59.025 50.000 24.00 0.00 37.39 3.01
627 628 2.090494 ACCTGCCCATATGGAGTAGTCT 60.090 50.000 24.00 6.62 37.39 3.24
628 629 2.300437 GACCTGCCCATATGGAGTAGTC 59.700 54.545 24.00 18.44 37.39 2.59
629 630 2.090494 AGACCTGCCCATATGGAGTAGT 60.090 50.000 24.00 14.32 37.39 2.73
630 631 2.301296 CAGACCTGCCCATATGGAGTAG 59.699 54.545 24.00 19.29 37.39 2.57
631 632 2.329267 CAGACCTGCCCATATGGAGTA 58.671 52.381 24.00 11.49 37.39 2.59
632 633 1.135094 CAGACCTGCCCATATGGAGT 58.865 55.000 24.00 13.97 37.39 3.85
633 634 1.135094 ACAGACCTGCCCATATGGAG 58.865 55.000 24.00 13.08 37.39 3.86
634 635 2.329267 CTACAGACCTGCCCATATGGA 58.671 52.381 24.00 2.88 37.39 3.41
635 636 1.271054 GCTACAGACCTGCCCATATGG 60.271 57.143 15.41 15.41 37.09 2.74
636 637 1.606480 CGCTACAGACCTGCCCATATG 60.606 57.143 0.00 0.00 0.00 1.78
637 638 0.681733 CGCTACAGACCTGCCCATAT 59.318 55.000 0.00 0.00 0.00 1.78
638 639 1.399744 CCGCTACAGACCTGCCCATA 61.400 60.000 0.00 0.00 0.00 2.74
639 640 2.735772 CCGCTACAGACCTGCCCAT 61.736 63.158 0.00 0.00 0.00 4.00
640 641 3.390521 CCGCTACAGACCTGCCCA 61.391 66.667 0.00 0.00 0.00 5.36
641 642 3.075005 TCCGCTACAGACCTGCCC 61.075 66.667 0.00 0.00 0.00 5.36
642 643 1.035932 TAGTCCGCTACAGACCTGCC 61.036 60.000 0.00 0.00 34.67 4.85
643 644 1.033574 ATAGTCCGCTACAGACCTGC 58.966 55.000 0.00 0.00 34.67 4.85
644 645 3.802948 AAATAGTCCGCTACAGACCTG 57.197 47.619 0.00 0.00 34.67 4.00
645 646 7.778185 ATATAAAATAGTCCGCTACAGACCT 57.222 36.000 0.00 0.00 34.67 3.85
646 647 9.918630 TTTATATAAAATAGTCCGCTACAGACC 57.081 33.333 5.41 0.00 34.67 3.85
797 1061 5.185341 CACAACGTACGTTTTCTTACAGTG 58.815 41.667 29.91 24.93 36.00 3.66
799 1063 4.268405 ACCACAACGTACGTTTTCTTACAG 59.732 41.667 29.91 18.18 36.00 2.74
899 1169 3.863086 CTGTGGGAATCTAGGGGACTAT 58.137 50.000 0.00 0.00 43.39 2.12
900 1170 2.693074 GCTGTGGGAATCTAGGGGACTA 60.693 54.545 0.00 0.00 43.67 2.59
909 1180 0.610232 GGCTTGTGCTGTGGGAATCT 60.610 55.000 0.00 0.00 39.59 2.40
954 1226 3.510360 AGTATATATGCGACTGGGTGGTC 59.490 47.826 0.00 0.00 0.00 4.02
956 1228 4.438336 CGTAGTATATATGCGACTGGGTGG 60.438 50.000 11.17 0.00 0.00 4.61
973 1249 5.008331 AGATTGACCTGTTCACTCGTAGTA 58.992 41.667 0.00 0.00 38.62 1.82
974 1250 3.827302 AGATTGACCTGTTCACTCGTAGT 59.173 43.478 0.00 0.00 38.62 2.73
975 1251 4.442375 AGATTGACCTGTTCACTCGTAG 57.558 45.455 0.00 0.00 38.62 3.51
1527 1803 0.320421 CGAGGAAGAAGCCCACGAAA 60.320 55.000 0.00 0.00 32.59 3.46
1786 2338 1.411977 CTTGGTCGAGATGCTCTCCAT 59.588 52.381 7.36 0.00 40.34 3.41
2070 2908 0.392863 CCATGACGTTCCAGATGGCA 60.393 55.000 0.00 0.00 36.51 4.92
2185 3023 4.083643 ACTTGACGATGCAAGAATTCACTG 60.084 41.667 18.87 5.74 46.31 3.66
2197 3035 4.992381 AAAGAAGTACACTTGACGATGC 57.008 40.909 0.00 0.00 36.11 3.91
2242 3080 3.722295 GCACAACGGCTAGCGCAA 61.722 61.111 11.47 0.00 38.10 4.85
2243 3081 4.978863 TGCACAACGGCTAGCGCA 62.979 61.111 11.47 8.66 38.10 6.09
2244 3082 3.499737 ATGCACAACGGCTAGCGC 61.500 61.111 9.00 0.00 34.04 5.92
2245 3083 1.081556 TACATGCACAACGGCTAGCG 61.082 55.000 9.00 6.83 34.04 4.26
2246 3084 0.373716 GTACATGCACAACGGCTAGC 59.626 55.000 6.04 6.04 34.04 3.42
2250 3088 0.094046 GTACGTACATGCACAACGGC 59.906 55.000 20.67 9.25 40.81 5.68
2252 3090 1.054574 ACGTACGTACATGCACAACG 58.945 50.000 21.41 15.68 42.17 4.10
2253 3091 3.424861 TGTTACGTACGTACATGCACAAC 59.575 43.478 26.83 20.50 0.00 3.32
2263 3113 5.051708 CGCAGATACTACTGTTACGTACGTA 60.052 44.000 23.60 23.60 39.73 3.57
2269 3119 6.040962 TCTAACGCAGATACTACTGTTACG 57.959 41.667 0.00 0.00 39.73 3.18
2270 3120 7.863666 AGATCTAACGCAGATACTACTGTTAC 58.136 38.462 0.00 0.00 44.41 2.50
2271 3121 8.447924 AAGATCTAACGCAGATACTACTGTTA 57.552 34.615 0.00 0.00 44.41 2.41
2273 3123 6.945938 AAGATCTAACGCAGATACTACTGT 57.054 37.500 0.00 0.00 44.41 3.55
2276 3126 7.916450 ACAAGAAAGATCTAACGCAGATACTAC 59.084 37.037 0.00 0.00 44.41 2.73
2277 3127 7.997482 ACAAGAAAGATCTAACGCAGATACTA 58.003 34.615 0.00 0.00 44.41 1.82
2278 3128 6.868622 ACAAGAAAGATCTAACGCAGATACT 58.131 36.000 0.00 0.00 44.41 2.12
2279 3129 7.527084 AACAAGAAAGATCTAACGCAGATAC 57.473 36.000 0.00 0.00 44.41 2.24
2283 3133 5.220228 CCGTAACAAGAAAGATCTAACGCAG 60.220 44.000 0.00 0.00 33.77 5.18
2284 3134 4.624024 CCGTAACAAGAAAGATCTAACGCA 59.376 41.667 0.00 0.00 33.77 5.24
2285 3135 4.492085 GCCGTAACAAGAAAGATCTAACGC 60.492 45.833 0.00 0.00 33.77 4.84
2286 3136 4.624024 TGCCGTAACAAGAAAGATCTAACG 59.376 41.667 0.00 0.00 33.77 3.18
2287 3137 6.663944 ATGCCGTAACAAGAAAGATCTAAC 57.336 37.500 0.00 0.00 33.77 2.34
2288 3138 7.553334 ACTATGCCGTAACAAGAAAGATCTAA 58.447 34.615 0.00 0.00 33.77 2.10
2418 3599 0.936600 CAACTGTCATGCACACACGA 59.063 50.000 0.00 0.00 0.00 4.35
2423 3604 1.140652 TCCTGTCAACTGTCATGCACA 59.859 47.619 0.00 0.00 0.00 4.57
2484 3665 0.606130 TGCATGAACCACACGCATCT 60.606 50.000 0.00 0.00 42.76 2.90
2509 3913 1.219124 CACCTCGTCACCCATCAGG 59.781 63.158 0.00 0.00 43.78 3.86
2755 4159 1.575244 CGTTGATGATGCCGATGAGT 58.425 50.000 0.00 0.00 0.00 3.41
2821 4225 4.536364 AACTTTCGATCGGCATGTATTG 57.464 40.909 16.41 0.00 0.00 1.90
2822 4226 7.656137 ACTTATAACTTTCGATCGGCATGTATT 59.344 33.333 16.41 3.97 0.00 1.89
2823 4227 7.152645 ACTTATAACTTTCGATCGGCATGTAT 58.847 34.615 16.41 10.34 0.00 2.29
2824 4228 6.509656 ACTTATAACTTTCGATCGGCATGTA 58.490 36.000 16.41 3.37 0.00 2.29
2844 4248 0.249531 TGCAGCGGTTCGTCAACTTA 60.250 50.000 0.00 0.00 32.50 2.24
3024 4896 0.108615 GTGCACGCTGATACCTCTGT 60.109 55.000 0.00 0.00 0.00 3.41
3025 4897 0.807667 GGTGCACGCTGATACCTCTG 60.808 60.000 11.45 0.00 0.00 3.35
3044 4916 2.315925 ACCAGCGGATGATGTGTTAG 57.684 50.000 0.00 0.00 0.00 2.34
3045 4917 4.415881 AATACCAGCGGATGATGTGTTA 57.584 40.909 0.00 0.00 0.00 2.41
3047 4919 3.281727 AAATACCAGCGGATGATGTGT 57.718 42.857 0.00 0.00 0.00 3.72
3048 4920 4.631131 TCTAAATACCAGCGGATGATGTG 58.369 43.478 0.00 0.00 0.00 3.21
3049 4921 4.800914 GCTCTAAATACCAGCGGATGATGT 60.801 45.833 0.00 0.00 0.00 3.06
3050 4922 3.681897 GCTCTAAATACCAGCGGATGATG 59.318 47.826 0.00 0.00 0.00 3.07
3051 4923 3.324846 TGCTCTAAATACCAGCGGATGAT 59.675 43.478 0.00 0.00 35.81 2.45
3052 4924 2.698274 TGCTCTAAATACCAGCGGATGA 59.302 45.455 0.00 0.00 35.81 2.92
3053 4925 3.111853 TGCTCTAAATACCAGCGGATG 57.888 47.619 1.50 0.00 35.81 3.51
3054 4926 3.134804 ACTTGCTCTAAATACCAGCGGAT 59.865 43.478 1.50 0.00 35.81 4.18
3055 4927 2.500098 ACTTGCTCTAAATACCAGCGGA 59.500 45.455 1.50 0.00 35.81 5.54
3056 4928 2.906354 ACTTGCTCTAAATACCAGCGG 58.094 47.619 0.00 0.00 35.81 5.52
3057 4929 4.267928 GTGTACTTGCTCTAAATACCAGCG 59.732 45.833 0.00 0.00 35.81 5.18
3058 4930 5.420409 AGTGTACTTGCTCTAAATACCAGC 58.580 41.667 0.00 0.00 0.00 4.85
3059 4931 7.997482 TCTAGTGTACTTGCTCTAAATACCAG 58.003 38.462 0.00 0.00 0.00 4.00
3060 4932 7.614583 ACTCTAGTGTACTTGCTCTAAATACCA 59.385 37.037 0.00 0.00 0.00 3.25
3063 4935 8.675504 GTCACTCTAGTGTACTTGCTCTAAATA 58.324 37.037 9.81 0.00 45.76 1.40
3065 4937 6.715718 AGTCACTCTAGTGTACTTGCTCTAAA 59.284 38.462 9.81 0.00 45.76 1.85
3066 4938 6.239396 AGTCACTCTAGTGTACTTGCTCTAA 58.761 40.000 9.81 0.00 45.76 2.10
3067 4939 5.806818 AGTCACTCTAGTGTACTTGCTCTA 58.193 41.667 9.81 0.00 45.76 2.43
3070 4942 5.416326 CCTAAGTCACTCTAGTGTACTTGCT 59.584 44.000 23.45 11.07 45.76 3.91
3071 4943 5.183522 ACCTAAGTCACTCTAGTGTACTTGC 59.816 44.000 23.45 7.95 45.76 4.01
3072 4944 6.349445 CCACCTAAGTCACTCTAGTGTACTTG 60.349 46.154 23.45 16.18 45.76 3.16
3073 4945 5.711036 CCACCTAAGTCACTCTAGTGTACTT 59.289 44.000 21.00 21.00 45.76 2.24
3074 4946 5.254901 CCACCTAAGTCACTCTAGTGTACT 58.745 45.833 9.81 9.04 45.76 2.73
3075 4947 4.398673 CCCACCTAAGTCACTCTAGTGTAC 59.601 50.000 9.81 7.16 45.76 2.90
3076 4948 4.597004 CCCACCTAAGTCACTCTAGTGTA 58.403 47.826 9.81 0.00 45.76 2.90
3077 4949 3.432378 CCCACCTAAGTCACTCTAGTGT 58.568 50.000 9.81 0.00 45.76 3.55
3078 4950 2.166664 GCCCACCTAAGTCACTCTAGTG 59.833 54.545 3.64 3.64 46.91 2.74
3080 4952 2.741145 AGCCCACCTAAGTCACTCTAG 58.259 52.381 0.00 0.00 0.00 2.43
3082 4954 2.921834 TAGCCCACCTAAGTCACTCT 57.078 50.000 0.00 0.00 0.00 3.24
3083 4955 5.609533 TTTATAGCCCACCTAAGTCACTC 57.390 43.478 0.00 0.00 0.00 3.51
3084 4956 5.724854 TCTTTTATAGCCCACCTAAGTCACT 59.275 40.000 0.00 0.00 0.00 3.41
3085 4957 5.985911 TCTTTTATAGCCCACCTAAGTCAC 58.014 41.667 0.00 0.00 0.00 3.67
3089 4961 6.483640 GTGACATCTTTTATAGCCCACCTAAG 59.516 42.308 0.00 0.00 0.00 2.18
3091 4963 5.427157 TGTGACATCTTTTATAGCCCACCTA 59.573 40.000 0.00 0.00 0.00 3.08
3092 4964 4.227300 TGTGACATCTTTTATAGCCCACCT 59.773 41.667 0.00 0.00 0.00 4.00
3093 4965 4.523083 TGTGACATCTTTTATAGCCCACC 58.477 43.478 0.00 0.00 0.00 4.61
3095 4967 5.056480 CGATGTGACATCTTTTATAGCCCA 58.944 41.667 21.83 0.00 0.00 5.36
3097 4969 4.511454 TGCGATGTGACATCTTTTATAGCC 59.489 41.667 21.83 3.78 0.00 3.93
3098 4970 5.657470 TGCGATGTGACATCTTTTATAGC 57.343 39.130 21.83 15.91 0.00 2.97
3101 4973 7.592533 GCATAAATGCGATGTGACATCTTTTAT 59.407 33.333 21.83 20.86 44.67 1.40
3102 4974 6.912051 GCATAAATGCGATGTGACATCTTTTA 59.088 34.615 21.83 19.86 44.67 1.52
3106 4978 4.478843 GCATAAATGCGATGTGACATCT 57.521 40.909 21.83 6.74 44.67 2.90
3119 4991 9.322773 TCTCTCTCTTTCAACTATGCATAAATG 57.677 33.333 8.00 9.60 0.00 2.32
3120 4992 9.896645 TTCTCTCTCTTTCAACTATGCATAAAT 57.103 29.630 8.00 0.00 0.00 1.40
3121 4993 9.376075 CTTCTCTCTCTTTCAACTATGCATAAA 57.624 33.333 8.00 0.00 0.00 1.40
3122 4994 8.753133 TCTTCTCTCTCTTTCAACTATGCATAA 58.247 33.333 8.00 0.00 0.00 1.90
3123 4995 8.298729 TCTTCTCTCTCTTTCAACTATGCATA 57.701 34.615 6.20 6.20 0.00 3.14
3124 4996 7.180322 TCTTCTCTCTCTTTCAACTATGCAT 57.820 36.000 3.79 3.79 0.00 3.96
3125 4997 6.596309 TCTTCTCTCTCTTTCAACTATGCA 57.404 37.500 0.00 0.00 0.00 3.96
3128 5000 9.927668 CTCTTTTCTTCTCTCTCTTTCAACTAT 57.072 33.333 0.00 0.00 0.00 2.12
3129 5001 9.137459 TCTCTTTTCTTCTCTCTCTTTCAACTA 57.863 33.333 0.00 0.00 0.00 2.24
3130 5002 8.017418 TCTCTTTTCTTCTCTCTCTTTCAACT 57.983 34.615 0.00 0.00 0.00 3.16
3131 5003 8.655651 TTCTCTTTTCTTCTCTCTCTTTCAAC 57.344 34.615 0.00 0.00 0.00 3.18
3132 5004 7.440856 GCTTCTCTTTTCTTCTCTCTCTTTCAA 59.559 37.037 0.00 0.00 0.00 2.69
3134 5006 6.089417 CGCTTCTCTTTTCTTCTCTCTCTTTC 59.911 42.308 0.00 0.00 0.00 2.62
3135 5007 5.925969 CGCTTCTCTTTTCTTCTCTCTCTTT 59.074 40.000 0.00 0.00 0.00 2.52
3136 5008 5.469479 CGCTTCTCTTTTCTTCTCTCTCTT 58.531 41.667 0.00 0.00 0.00 2.85
3138 5010 4.173256 CCGCTTCTCTTTTCTTCTCTCTC 58.827 47.826 0.00 0.00 0.00 3.20
3139 5011 3.056179 CCCGCTTCTCTTTTCTTCTCTCT 60.056 47.826 0.00 0.00 0.00 3.10
3140 5012 3.258228 CCCGCTTCTCTTTTCTTCTCTC 58.742 50.000 0.00 0.00 0.00 3.20
3141 5013 2.635427 ACCCGCTTCTCTTTTCTTCTCT 59.365 45.455 0.00 0.00 0.00 3.10
3142 5014 3.046968 ACCCGCTTCTCTTTTCTTCTC 57.953 47.619 0.00 0.00 0.00 2.87
3145 5017 1.609072 GCAACCCGCTTCTCTTTTCTT 59.391 47.619 0.00 0.00 37.77 2.52
3146 5018 1.239347 GCAACCCGCTTCTCTTTTCT 58.761 50.000 0.00 0.00 37.77 2.52
3147 5019 0.951558 TGCAACCCGCTTCTCTTTTC 59.048 50.000 0.00 0.00 43.06 2.29
3148 5020 1.270550 CATGCAACCCGCTTCTCTTTT 59.729 47.619 0.00 0.00 43.06 2.27
3149 5021 0.883833 CATGCAACCCGCTTCTCTTT 59.116 50.000 0.00 0.00 43.06 2.52
3150 5022 1.589716 GCATGCAACCCGCTTCTCTT 61.590 55.000 14.21 0.00 43.06 2.85
3151 5023 2.042831 GCATGCAACCCGCTTCTCT 61.043 57.895 14.21 0.00 43.06 3.10
3154 5026 0.740737 ATAAGCATGCAACCCGCTTC 59.259 50.000 21.98 0.00 44.53 3.86
3156 5028 1.597742 CTATAAGCATGCAACCCGCT 58.402 50.000 21.98 0.00 43.06 5.52
3157 5029 0.040067 GCTATAAGCATGCAACCCGC 60.040 55.000 21.98 12.67 41.89 6.13
3158 5030 0.593128 GGCTATAAGCATGCAACCCG 59.407 55.000 21.98 6.21 44.75 5.28
3159 5031 0.593128 CGGCTATAAGCATGCAACCC 59.407 55.000 21.98 9.80 44.75 4.11
3160 5032 0.593128 CCGGCTATAAGCATGCAACC 59.407 55.000 21.98 10.21 44.75 3.77
3161 5033 1.593196 TCCGGCTATAAGCATGCAAC 58.407 50.000 21.98 1.75 44.75 4.17
3163 5035 1.072173 ACATCCGGCTATAAGCATGCA 59.928 47.619 21.98 0.00 44.75 3.96
3164 5036 1.813513 ACATCCGGCTATAAGCATGC 58.186 50.000 10.51 10.51 44.75 4.06
3165 5037 4.627467 GTCTTACATCCGGCTATAAGCATG 59.373 45.833 0.00 0.00 44.75 4.06
3166 5038 4.283467 TGTCTTACATCCGGCTATAAGCAT 59.717 41.667 0.00 0.00 44.75 3.79
3168 5040 4.252971 TGTCTTACATCCGGCTATAAGC 57.747 45.455 0.00 0.00 41.46 3.09
3170 5042 5.221382 GGTCTTGTCTTACATCCGGCTATAA 60.221 44.000 0.00 0.00 0.00 0.98
3171 5043 4.280174 GGTCTTGTCTTACATCCGGCTATA 59.720 45.833 0.00 0.00 0.00 1.31
3172 5044 3.069729 GGTCTTGTCTTACATCCGGCTAT 59.930 47.826 0.00 0.00 0.00 2.97
3173 5045 2.429610 GGTCTTGTCTTACATCCGGCTA 59.570 50.000 0.00 0.00 0.00 3.93
3174 5046 1.207329 GGTCTTGTCTTACATCCGGCT 59.793 52.381 0.00 0.00 0.00 5.52
3175 5047 1.653151 GGTCTTGTCTTACATCCGGC 58.347 55.000 0.00 0.00 0.00 6.13
3178 5050 2.232941 TGTCGGGTCTTGTCTTACATCC 59.767 50.000 0.00 0.00 0.00 3.51
3179 5051 3.587797 TGTCGGGTCTTGTCTTACATC 57.412 47.619 0.00 0.00 0.00 3.06
3181 5053 3.133362 AGTTTGTCGGGTCTTGTCTTACA 59.867 43.478 0.00 0.00 0.00 2.41
3182 5054 3.725490 AGTTTGTCGGGTCTTGTCTTAC 58.275 45.455 0.00 0.00 0.00 2.34
3183 5055 4.411256 AAGTTTGTCGGGTCTTGTCTTA 57.589 40.909 0.00 0.00 0.00 2.10
3184 5056 3.277142 AAGTTTGTCGGGTCTTGTCTT 57.723 42.857 0.00 0.00 0.00 3.01
3186 5058 2.681344 ACAAAGTTTGTCGGGTCTTGTC 59.319 45.455 15.58 0.00 40.56 3.18
3188 5060 2.680841 TCACAAAGTTTGTCGGGTCTTG 59.319 45.455 18.34 5.37 43.23 3.02
3189 5061 2.943033 CTCACAAAGTTTGTCGGGTCTT 59.057 45.455 18.34 0.00 43.23 3.01
3190 5062 2.169769 TCTCACAAAGTTTGTCGGGTCT 59.830 45.455 18.34 0.00 43.23 3.85
3191 5063 2.544267 CTCTCACAAAGTTTGTCGGGTC 59.456 50.000 18.34 0.00 43.23 4.46
3192 5064 2.169769 TCTCTCACAAAGTTTGTCGGGT 59.830 45.455 18.34 0.00 43.23 5.28
3193 5065 2.833794 TCTCTCACAAAGTTTGTCGGG 58.166 47.619 18.34 13.54 43.23 5.14
3194 5066 4.875544 TTTCTCTCACAAAGTTTGTCGG 57.124 40.909 18.34 13.35 43.23 4.79
3195 5067 6.542852 TCTTTTTCTCTCACAAAGTTTGTCG 58.457 36.000 18.34 13.55 43.23 4.35
3249 5121 8.267894 GCCCATCCATACAATATCTGTTATACT 58.732 37.037 0.00 0.00 39.64 2.12
3251 5123 8.392631 AGCCCATCCATACAATATCTGTTATA 57.607 34.615 0.00 0.00 39.64 0.98
3253 5125 6.702449 AGCCCATCCATACAATATCTGTTA 57.298 37.500 0.00 0.00 39.64 2.41
3256 5128 7.935755 CCTAATAGCCCATCCATACAATATCTG 59.064 40.741 0.00 0.00 0.00 2.90
3257 5129 7.629315 ACCTAATAGCCCATCCATACAATATCT 59.371 37.037 0.00 0.00 0.00 1.98
3258 5130 7.806180 ACCTAATAGCCCATCCATACAATATC 58.194 38.462 0.00 0.00 0.00 1.63
3259 5131 7.771506 ACCTAATAGCCCATCCATACAATAT 57.228 36.000 0.00 0.00 0.00 1.28
3260 5132 7.402054 CAACCTAATAGCCCATCCATACAATA 58.598 38.462 0.00 0.00 0.00 1.90
3261 5133 6.248433 CAACCTAATAGCCCATCCATACAAT 58.752 40.000 0.00 0.00 0.00 2.71
3262 5134 5.457487 CCAACCTAATAGCCCATCCATACAA 60.457 44.000 0.00 0.00 0.00 2.41
3263 5135 4.042809 CCAACCTAATAGCCCATCCATACA 59.957 45.833 0.00 0.00 0.00 2.29
3264 5136 4.042934 ACCAACCTAATAGCCCATCCATAC 59.957 45.833 0.00 0.00 0.00 2.39
3265 5137 4.247814 ACCAACCTAATAGCCCATCCATA 58.752 43.478 0.00 0.00 0.00 2.74
3266 5138 3.063650 ACCAACCTAATAGCCCATCCAT 58.936 45.455 0.00 0.00 0.00 3.41
3268 5140 3.595190 AACCAACCTAATAGCCCATCC 57.405 47.619 0.00 0.00 0.00 3.51
3269 5141 8.739972 CATTTATAACCAACCTAATAGCCCATC 58.260 37.037 0.00 0.00 0.00 3.51
3270 5142 8.452868 TCATTTATAACCAACCTAATAGCCCAT 58.547 33.333 0.00 0.00 0.00 4.00
3272 5144 7.094933 CGTCATTTATAACCAACCTAATAGCCC 60.095 40.741 0.00 0.00 0.00 5.19
3274 5146 8.280497 CACGTCATTTATAACCAACCTAATAGC 58.720 37.037 0.00 0.00 0.00 2.97
3275 5147 8.280497 GCACGTCATTTATAACCAACCTAATAG 58.720 37.037 0.00 0.00 0.00 1.73
3276 5148 7.227116 GGCACGTCATTTATAACCAACCTAATA 59.773 37.037 0.00 0.00 0.00 0.98
3277 5149 6.038936 GGCACGTCATTTATAACCAACCTAAT 59.961 38.462 0.00 0.00 0.00 1.73
3279 5151 4.877251 GGCACGTCATTTATAACCAACCTA 59.123 41.667 0.00 0.00 0.00 3.08
3280 5152 3.692593 GGCACGTCATTTATAACCAACCT 59.307 43.478 0.00 0.00 0.00 3.50
3281 5153 3.440872 TGGCACGTCATTTATAACCAACC 59.559 43.478 0.00 0.00 0.00 3.77
3282 5154 4.688511 TGGCACGTCATTTATAACCAAC 57.311 40.909 0.00 0.00 0.00 3.77
3283 5155 4.762765 AGTTGGCACGTCATTTATAACCAA 59.237 37.500 0.00 0.00 33.72 3.67
3284 5156 4.328536 AGTTGGCACGTCATTTATAACCA 58.671 39.130 0.00 0.00 0.00 3.67
3285 5157 4.201881 GGAGTTGGCACGTCATTTATAACC 60.202 45.833 0.00 0.00 0.00 2.85
3286 5158 4.393680 TGGAGTTGGCACGTCATTTATAAC 59.606 41.667 0.00 0.00 0.00 1.89
3289 5161 3.066291 TGGAGTTGGCACGTCATTTAT 57.934 42.857 0.00 0.00 0.00 1.40
3291 5163 1.909700 ATGGAGTTGGCACGTCATTT 58.090 45.000 0.00 0.00 0.00 2.32
3292 5164 2.779755 TATGGAGTTGGCACGTCATT 57.220 45.000 0.00 0.00 0.00 2.57
3294 5166 3.527533 GTTATATGGAGTTGGCACGTCA 58.472 45.455 0.00 0.00 0.00 4.35
3296 5168 2.740580 CGGTTATATGGAGTTGGCACGT 60.741 50.000 0.00 0.00 0.00 4.49
3297 5169 1.864711 CGGTTATATGGAGTTGGCACG 59.135 52.381 0.00 0.00 0.00 5.34
3298 5170 2.870411 GTCGGTTATATGGAGTTGGCAC 59.130 50.000 0.00 0.00 0.00 5.01
3299 5171 2.769663 AGTCGGTTATATGGAGTTGGCA 59.230 45.455 0.00 0.00 0.00 4.92
3300 5172 3.069729 AGAGTCGGTTATATGGAGTTGGC 59.930 47.826 0.00 0.00 0.00 4.52
3301 5173 4.939052 AGAGTCGGTTATATGGAGTTGG 57.061 45.455 0.00 0.00 0.00 3.77
3303 5175 5.657302 AGTCAAGAGTCGGTTATATGGAGTT 59.343 40.000 0.00 0.00 0.00 3.01
3305 5177 5.776173 AGTCAAGAGTCGGTTATATGGAG 57.224 43.478 0.00 0.00 0.00 3.86
3307 5179 8.338072 AGTATAGTCAAGAGTCGGTTATATGG 57.662 38.462 0.00 0.00 0.00 2.74
3313 5185 8.628280 GGTTAATAGTATAGTCAAGAGTCGGTT 58.372 37.037 0.00 0.00 0.00 4.44
3314 5186 7.776969 TGGTTAATAGTATAGTCAAGAGTCGGT 59.223 37.037 0.00 0.00 0.00 4.69
3315 5187 8.162878 TGGTTAATAGTATAGTCAAGAGTCGG 57.837 38.462 0.00 0.00 0.00 4.79
3317 5189 9.413048 GCATGGTTAATAGTATAGTCAAGAGTC 57.587 37.037 0.00 0.00 0.00 3.36
3318 5190 9.148879 AGCATGGTTAATAGTATAGTCAAGAGT 57.851 33.333 0.00 0.00 0.00 3.24
3321 5193 9.988815 AAGAGCATGGTTAATAGTATAGTCAAG 57.011 33.333 0.00 0.00 0.00 3.02
3329 5201 9.998106 GGAAAGATAAGAGCATGGTTAATAGTA 57.002 33.333 0.00 0.00 0.00 1.82
3330 5202 8.718656 AGGAAAGATAAGAGCATGGTTAATAGT 58.281 33.333 0.00 0.00 0.00 2.12
3331 5203 8.997323 CAGGAAAGATAAGAGCATGGTTAATAG 58.003 37.037 0.00 0.00 0.00 1.73
3332 5204 7.939039 CCAGGAAAGATAAGAGCATGGTTAATA 59.061 37.037 0.00 0.00 0.00 0.98
3333 5205 6.774656 CCAGGAAAGATAAGAGCATGGTTAAT 59.225 38.462 0.00 0.00 0.00 1.40
3334 5206 6.122277 CCAGGAAAGATAAGAGCATGGTTAA 58.878 40.000 0.00 0.00 0.00 2.01
3335 5207 5.684704 CCAGGAAAGATAAGAGCATGGTTA 58.315 41.667 0.00 0.00 0.00 2.85
3336 5208 4.530875 CCAGGAAAGATAAGAGCATGGTT 58.469 43.478 0.00 0.00 0.00 3.67
3337 5209 3.686691 GCCAGGAAAGATAAGAGCATGGT 60.687 47.826 0.00 0.00 0.00 3.55
3338 5210 2.883386 GCCAGGAAAGATAAGAGCATGG 59.117 50.000 0.00 0.00 0.00 3.66
3339 5211 2.883386 GGCCAGGAAAGATAAGAGCATG 59.117 50.000 0.00 0.00 0.00 4.06
3346 5266 6.096846 GCTAATTTGAAGGCCAGGAAAGATAA 59.903 38.462 5.01 0.00 0.00 1.75
3353 5273 1.004277 ACGCTAATTTGAAGGCCAGGA 59.996 47.619 5.01 0.00 0.00 3.86
3354 5274 1.463674 ACGCTAATTTGAAGGCCAGG 58.536 50.000 5.01 0.00 0.00 4.45
3357 5277 3.311596 ACGATTACGCTAATTTGAAGGCC 59.688 43.478 0.00 0.00 43.96 5.19
3366 5286 4.110482 GTCAACTGGACGATTACGCTAAT 58.890 43.478 0.00 0.00 43.96 1.73
3378 5298 0.685097 TGGGCTAGTGTCAACTGGAC 59.315 55.000 0.00 0.00 42.14 4.02
3379 5299 0.685097 GTGGGCTAGTGTCAACTGGA 59.315 55.000 0.00 0.00 37.06 3.86
3380 5300 0.321653 GGTGGGCTAGTGTCAACTGG 60.322 60.000 0.00 0.00 37.19 4.00
3381 5301 0.396435 TGGTGGGCTAGTGTCAACTG 59.604 55.000 0.00 0.00 37.19 3.16
3382 5302 0.396811 GTGGTGGGCTAGTGTCAACT 59.603 55.000 0.00 0.00 40.67 3.16
3384 5304 0.107831 GTGTGGTGGGCTAGTGTCAA 59.892 55.000 0.00 0.00 0.00 3.18
3387 5307 1.831736 GATAGTGTGGTGGGCTAGTGT 59.168 52.381 0.00 0.00 0.00 3.55
3389 5309 1.273609 TGGATAGTGTGGTGGGCTAGT 60.274 52.381 0.00 0.00 0.00 2.57
3390 5310 1.139058 GTGGATAGTGTGGTGGGCTAG 59.861 57.143 0.00 0.00 0.00 3.42
3391 5311 1.200519 GTGGATAGTGTGGTGGGCTA 58.799 55.000 0.00 0.00 0.00 3.93
3403 5332 5.771666 AGAATTGGTATTGCATGGTGGATAG 59.228 40.000 0.00 0.00 0.00 2.08
3408 5337 6.889301 ATAGAGAATTGGTATTGCATGGTG 57.111 37.500 0.00 0.00 0.00 4.17
3409 5338 6.205464 CGAATAGAGAATTGGTATTGCATGGT 59.795 38.462 0.00 0.00 0.00 3.55
3412 5341 5.707298 CCCGAATAGAGAATTGGTATTGCAT 59.293 40.000 0.00 0.00 0.00 3.96
3414 5343 5.305585 TCCCGAATAGAGAATTGGTATTGC 58.694 41.667 0.00 0.00 0.00 3.56
3416 5345 6.749036 ACTCCCGAATAGAGAATTGGTATT 57.251 37.500 0.00 0.00 35.27 1.89
3417 5346 6.071278 GCTACTCCCGAATAGAGAATTGGTAT 60.071 42.308 0.00 0.00 35.27 2.73
3418 5347 5.243283 GCTACTCCCGAATAGAGAATTGGTA 59.757 44.000 0.00 0.00 35.27 3.25
3420 5349 4.282195 AGCTACTCCCGAATAGAGAATTGG 59.718 45.833 0.00 0.00 35.27 3.16
3421 5350 5.461032 AGCTACTCCCGAATAGAGAATTG 57.539 43.478 0.00 0.00 35.27 2.32
3422 5351 5.598830 TGAAGCTACTCCCGAATAGAGAATT 59.401 40.000 0.00 0.00 35.27 2.17
3424 5353 4.533815 TGAAGCTACTCCCGAATAGAGAA 58.466 43.478 0.00 0.00 35.27 2.87
3425 5354 4.166246 TGAAGCTACTCCCGAATAGAGA 57.834 45.455 0.00 0.00 35.27 3.10
3426 5355 4.920640 TTGAAGCTACTCCCGAATAGAG 57.079 45.455 0.00 0.00 37.39 2.43
3427 5356 5.128827 ACAATTGAAGCTACTCCCGAATAGA 59.871 40.000 13.59 0.00 0.00 1.98
3429 5358 5.353394 ACAATTGAAGCTACTCCCGAATA 57.647 39.130 13.59 0.00 0.00 1.75
3430 5359 4.222124 ACAATTGAAGCTACTCCCGAAT 57.778 40.909 13.59 0.00 0.00 3.34
3431 5360 3.695830 ACAATTGAAGCTACTCCCGAA 57.304 42.857 13.59 0.00 0.00 4.30
3433 5362 3.502211 ACAAACAATTGAAGCTACTCCCG 59.498 43.478 13.59 0.00 38.94 5.14
3434 5363 5.453567 AACAAACAATTGAAGCTACTCCC 57.546 39.130 13.59 0.00 38.94 4.30
3435 5364 5.625311 CGAAACAAACAATTGAAGCTACTCC 59.375 40.000 13.59 0.00 38.94 3.85
3436 5365 6.199393 ACGAAACAAACAATTGAAGCTACTC 58.801 36.000 13.59 0.00 38.94 2.59
3437 5366 6.131544 ACGAAACAAACAATTGAAGCTACT 57.868 33.333 13.59 0.00 38.94 2.57
3438 5367 6.691388 AGAACGAAACAAACAATTGAAGCTAC 59.309 34.615 13.59 0.00 38.94 3.58
3440 5369 5.650543 AGAACGAAACAAACAATTGAAGCT 58.349 33.333 13.59 0.00 38.94 3.74
3441 5370 5.949233 AGAACGAAACAAACAATTGAAGC 57.051 34.783 13.59 0.00 38.94 3.86
3442 5371 7.273381 ACTGAAGAACGAAACAAACAATTGAAG 59.727 33.333 13.59 3.78 38.94 3.02
3444 5373 6.616947 ACTGAAGAACGAAACAAACAATTGA 58.383 32.000 13.59 0.00 38.94 2.57
3445 5374 6.869421 ACTGAAGAACGAAACAAACAATTG 57.131 33.333 3.24 3.24 42.46 2.32
3446 5375 7.883229 AAACTGAAGAACGAAACAAACAATT 57.117 28.000 0.00 0.00 0.00 2.32
3447 5376 7.596995 TGAAAACTGAAGAACGAAACAAACAAT 59.403 29.630 0.00 0.00 0.00 2.71
3458 5387 2.806244 ACCCGATGAAAACTGAAGAACG 59.194 45.455 0.00 0.00 0.00 3.95
3459 5388 4.830826 AACCCGATGAAAACTGAAGAAC 57.169 40.909 0.00 0.00 0.00 3.01
3514 5443 3.059188 TGCAAAAAGTAGACAAGCGCTAC 60.059 43.478 12.05 4.34 38.76 3.58
3519 5448 4.846137 CGTGTATGCAAAAAGTAGACAAGC 59.154 41.667 0.00 0.00 35.84 4.01
3638 5567 3.604312 AGGTAGACCCTAGGAAAACCCTA 59.396 47.826 11.48 0.00 43.87 3.53
3639 5568 2.389620 AGGTAGACCCTAGGAAAACCCT 59.610 50.000 11.48 6.89 43.87 4.34
3640 5569 2.770802 GAGGTAGACCCTAGGAAAACCC 59.229 54.545 11.48 4.47 46.51 4.11
3641 5570 3.722172 AGAGGTAGACCCTAGGAAAACC 58.278 50.000 11.48 11.97 46.51 3.27
3642 5571 4.161942 GGAAGAGGTAGACCCTAGGAAAAC 59.838 50.000 11.48 2.65 46.51 2.43
3643 5572 4.046876 AGGAAGAGGTAGACCCTAGGAAAA 59.953 45.833 11.48 0.00 46.51 2.29
3644 5573 3.601537 AGGAAGAGGTAGACCCTAGGAAA 59.398 47.826 11.48 0.00 46.51 3.13
3645 5574 3.208173 AGGAAGAGGTAGACCCTAGGAA 58.792 50.000 11.48 0.00 46.51 3.36
3646 5575 2.874447 AGGAAGAGGTAGACCCTAGGA 58.126 52.381 11.48 0.00 46.51 2.94
3647 5576 3.568443 GAAGGAAGAGGTAGACCCTAGG 58.432 54.545 0.06 0.06 46.51 3.02
3648 5577 3.215975 CGAAGGAAGAGGTAGACCCTAG 58.784 54.545 0.00 0.00 46.51 3.02
3649 5578 3.294038 CGAAGGAAGAGGTAGACCCTA 57.706 52.381 0.00 0.00 46.51 3.53
3674 5603 1.577328 ATTTGTGGACTTCAGCGGCG 61.577 55.000 0.51 0.51 0.00 6.46
3675 5604 0.598065 AATTTGTGGACTTCAGCGGC 59.402 50.000 0.00 0.00 0.00 6.53
3676 5605 1.200020 GGAATTTGTGGACTTCAGCGG 59.800 52.381 0.00 0.00 0.00 5.52
3677 5606 1.200020 GGGAATTTGTGGACTTCAGCG 59.800 52.381 0.00 0.00 0.00 5.18
3678 5607 2.029918 GTGGGAATTTGTGGACTTCAGC 60.030 50.000 0.00 0.00 0.00 4.26
3679 5608 2.226437 CGTGGGAATTTGTGGACTTCAG 59.774 50.000 0.00 0.00 0.00 3.02
3680 5609 2.226330 CGTGGGAATTTGTGGACTTCA 58.774 47.619 0.00 0.00 0.00 3.02
3681 5610 2.031157 CACGTGGGAATTTGTGGACTTC 60.031 50.000 7.95 0.00 0.00 3.01
3682 5611 1.953686 CACGTGGGAATTTGTGGACTT 59.046 47.619 7.95 0.00 0.00 3.01
3683 5612 1.142060 TCACGTGGGAATTTGTGGACT 59.858 47.619 17.00 0.00 33.25 3.85
3684 5613 1.600023 TCACGTGGGAATTTGTGGAC 58.400 50.000 17.00 0.00 33.25 4.02
3685 5614 2.350057 TTCACGTGGGAATTTGTGGA 57.650 45.000 17.00 0.00 33.25 4.02
3686 5615 3.444703 TTTTCACGTGGGAATTTGTGG 57.555 42.857 17.00 0.00 33.25 4.17
3687 5616 3.668191 CGATTTTCACGTGGGAATTTGTG 59.332 43.478 17.00 4.81 0.00 3.33
3688 5617 3.305064 CCGATTTTCACGTGGGAATTTGT 60.305 43.478 17.00 0.00 0.00 2.83
3689 5618 3.241701 CCGATTTTCACGTGGGAATTTG 58.758 45.455 17.00 11.75 0.00 2.32
3690 5619 2.352323 GCCGATTTTCACGTGGGAATTT 60.352 45.455 17.00 2.49 0.00 1.82
3691 5620 1.201414 GCCGATTTTCACGTGGGAATT 59.799 47.619 17.00 7.59 0.00 2.17
3692 5621 0.808755 GCCGATTTTCACGTGGGAAT 59.191 50.000 17.00 15.42 0.00 3.01
3693 5622 1.238625 GGCCGATTTTCACGTGGGAA 61.239 55.000 17.00 11.15 0.00 3.97
3694 5623 1.673009 GGCCGATTTTCACGTGGGA 60.673 57.895 17.00 1.64 0.00 4.37
3695 5624 2.874751 GGCCGATTTTCACGTGGG 59.125 61.111 17.00 8.85 0.00 4.61
3696 5625 2.478746 CGGCCGATTTTCACGTGG 59.521 61.111 24.07 0.00 0.00 4.94
3697 5626 1.366111 ATCCGGCCGATTTTCACGTG 61.366 55.000 30.73 9.94 0.00 4.49
3698 5627 0.675522 AATCCGGCCGATTTTCACGT 60.676 50.000 30.73 0.00 38.02 4.49
3699 5628 0.248054 CAATCCGGCCGATTTTCACG 60.248 55.000 30.73 7.15 39.28 4.35
3700 5629 0.525455 GCAATCCGGCCGATTTTCAC 60.525 55.000 30.73 5.70 39.28 3.18
3701 5630 0.679640 AGCAATCCGGCCGATTTTCA 60.680 50.000 30.73 2.70 39.28 2.69
3702 5631 1.305201 TAGCAATCCGGCCGATTTTC 58.695 50.000 30.73 14.01 39.28 2.29
3703 5632 1.676006 CTTAGCAATCCGGCCGATTTT 59.324 47.619 30.73 14.20 39.28 1.82
3704 5633 1.308998 CTTAGCAATCCGGCCGATTT 58.691 50.000 30.73 17.03 39.28 2.17
3705 5634 1.166531 GCTTAGCAATCCGGCCGATT 61.167 55.000 30.73 20.83 42.18 3.34
3706 5635 1.598130 GCTTAGCAATCCGGCCGAT 60.598 57.895 30.73 15.71 0.00 4.18
3707 5636 2.203015 GCTTAGCAATCCGGCCGA 60.203 61.111 30.73 13.82 0.00 5.54
3708 5637 3.640000 CGCTTAGCAATCCGGCCG 61.640 66.667 21.04 21.04 0.00 6.13
3723 5652 3.869272 CCGATCACCAGCAAGCGC 61.869 66.667 0.00 0.00 38.99 5.92
3724 5653 3.197790 CCCGATCACCAGCAAGCG 61.198 66.667 0.00 0.00 0.00 4.68
3725 5654 2.045926 ACCCGATCACCAGCAAGC 60.046 61.111 0.00 0.00 0.00 4.01
3726 5655 1.811266 CGACCCGATCACCAGCAAG 60.811 63.158 0.00 0.00 0.00 4.01
3727 5656 2.264480 CGACCCGATCACCAGCAA 59.736 61.111 0.00 0.00 0.00 3.91
3728 5657 2.994995 ACGACCCGATCACCAGCA 60.995 61.111 0.00 0.00 0.00 4.41
3729 5658 2.202756 GACGACCCGATCACCAGC 60.203 66.667 0.00 0.00 0.00 4.85
3730 5659 2.494918 GGACGACCCGATCACCAG 59.505 66.667 0.00 0.00 0.00 4.00
3744 5673 1.375523 AAGACGATTGCCACGGGAC 60.376 57.895 0.00 0.00 34.93 4.46
3745 5674 1.375396 CAAGACGATTGCCACGGGA 60.375 57.895 0.00 0.00 34.93 5.14
3746 5675 2.398554 CCAAGACGATTGCCACGGG 61.399 63.158 0.00 0.00 34.93 5.28
3747 5676 0.390603 TACCAAGACGATTGCCACGG 60.391 55.000 0.00 0.00 34.93 4.94
3748 5677 0.719465 GTACCAAGACGATTGCCACG 59.281 55.000 0.00 0.00 0.00 4.94
3749 5678 1.463444 GTGTACCAAGACGATTGCCAC 59.537 52.381 0.00 0.00 0.00 5.01
3750 5679 1.609580 GGTGTACCAAGACGATTGCCA 60.610 52.381 0.00 0.00 35.64 4.92
3751 5680 1.084289 GGTGTACCAAGACGATTGCC 58.916 55.000 0.00 0.00 35.64 4.52
3752 5681 0.719465 CGGTGTACCAAGACGATTGC 59.281 55.000 1.50 0.00 35.14 3.56
3753 5682 2.074547 ACGGTGTACCAAGACGATTG 57.925 50.000 1.50 0.00 35.14 2.67
3754 5683 2.803956 CAAACGGTGTACCAAGACGATT 59.196 45.455 1.50 0.00 35.14 3.34
3755 5684 2.409975 CAAACGGTGTACCAAGACGAT 58.590 47.619 1.50 0.00 35.14 3.73
3756 5685 1.855513 CAAACGGTGTACCAAGACGA 58.144 50.000 1.50 0.00 35.14 4.20
3757 5686 0.233848 GCAAACGGTGTACCAAGACG 59.766 55.000 1.50 0.00 35.14 4.18
3758 5687 1.301423 TGCAAACGGTGTACCAAGAC 58.699 50.000 1.50 0.00 35.14 3.01
3759 5688 1.876799 CATGCAAACGGTGTACCAAGA 59.123 47.619 0.00 0.00 35.14 3.02
3760 5689 1.068610 CCATGCAAACGGTGTACCAAG 60.069 52.381 0.00 0.00 35.14 3.61
3761 5690 0.955178 CCATGCAAACGGTGTACCAA 59.045 50.000 0.00 0.00 35.14 3.67
3762 5691 0.108774 TCCATGCAAACGGTGTACCA 59.891 50.000 0.00 0.00 35.14 3.25
3763 5692 0.802494 CTCCATGCAAACGGTGTACC 59.198 55.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.