Multiple sequence alignment - TraesCS1B01G219500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G219500 chr1B 100.000 5651 0 0 3864 9514 396602578 396596928 0.000000e+00 10436.0
1 TraesCS1B01G219500 chr1B 100.000 3371 0 0 1 3371 396606441 396603071 0.000000e+00 6226.0
2 TraesCS1B01G219500 chr1B 88.676 1254 106 9 2151 3370 312927494 312926243 0.000000e+00 1496.0
3 TraesCS1B01G219500 chr1B 91.781 1095 60 8 2107 3174 385167220 385168311 0.000000e+00 1496.0
4 TraesCS1B01G219500 chr1B 88.106 1278 122 18 2107 3371 401787130 401785870 0.000000e+00 1491.0
5 TraesCS1B01G219500 chr1B 87.522 1146 102 7 2255 3366 652524228 652523090 0.000000e+00 1286.0
6 TraesCS1B01G219500 chr1B 89.635 1013 58 5 2107 3074 326773105 326772095 0.000000e+00 1245.0
7 TraesCS1B01G219500 chr1B 90.777 618 35 11 3865 4462 57106899 57107514 0.000000e+00 806.0
8 TraesCS1B01G219500 chr1B 92.578 512 30 7 3958 4462 359443898 359444408 0.000000e+00 728.0
9 TraesCS1B01G219500 chr1B 93.617 94 6 0 8810 8903 580632957 580632864 3.580000e-29 141.0
10 TraesCS1B01G219500 chr1D 94.949 2653 105 12 6023 8652 295277341 295274695 0.000000e+00 4130.0
11 TraesCS1B01G219500 chr1D 91.994 2136 94 22 1 2106 295281719 295279631 0.000000e+00 2926.0
12 TraesCS1B01G219500 chr1D 95.831 1487 44 8 4554 6026 295278945 295277463 0.000000e+00 2386.0
13 TraesCS1B01G219500 chr1D 97.393 537 14 0 8978 9514 295187337 295186801 0.000000e+00 915.0
14 TraesCS1B01G219500 chr1D 88.889 108 9 3 8800 8905 406664967 406665073 7.750000e-26 130.0
15 TraesCS1B01G219500 chr1D 98.276 58 0 1 4462 4519 295279636 295279580 6.080000e-17 100.0
16 TraesCS1B01G219500 chr1A 94.266 1273 58 7 5539 6797 368369944 368368673 0.000000e+00 1932.0
17 TraesCS1B01G219500 chr1A 95.671 1155 45 4 7499 8651 368367689 368366538 0.000000e+00 1851.0
18 TraesCS1B01G219500 chr1A 94.747 1085 39 5 4462 5543 368376395 368375326 0.000000e+00 1672.0
19 TraesCS1B01G219500 chr1A 92.320 625 26 5 8909 9514 368364919 368364298 0.000000e+00 869.0
20 TraesCS1B01G219500 chr1A 95.525 514 20 3 6796 7307 368368353 368367841 0.000000e+00 819.0
21 TraesCS1B01G219500 chr1A 94.872 351 12 1 1404 1754 368377053 368376709 2.340000e-150 544.0
22 TraesCS1B01G219500 chr1A 96.865 319 10 0 1789 2107 368376707 368376389 1.410000e-147 534.0
23 TraesCS1B01G219500 chr1A 96.154 130 5 0 8685 8814 368366538 368366409 7.480000e-51 213.0
24 TraesCS1B01G219500 chr1A 94.118 102 3 1 7308 7409 368367804 368367706 1.650000e-32 152.0
25 TraesCS1B01G219500 chr3B 94.421 1165 38 2 2107 3245 522241127 522242290 0.000000e+00 1766.0
26 TraesCS1B01G219500 chr3B 91.761 1238 53 11 2107 3316 790747349 790746133 0.000000e+00 1676.0
27 TraesCS1B01G219500 chr3B 89.164 1292 99 9 2107 3359 508752436 508753725 0.000000e+00 1572.0
28 TraesCS1B01G219500 chr3B 94.137 614 27 7 3864 4476 181301813 181301208 0.000000e+00 926.0
29 TraesCS1B01G219500 chr3B 95.592 363 12 4 4100 4462 67929066 67929424 6.410000e-161 579.0
30 TraesCS1B01G219500 chr3B 95.355 366 11 5 4100 4465 790745364 790745005 2.300000e-160 577.0
31 TraesCS1B01G219500 chr3B 93.796 274 17 0 3864 4137 682068548 682068821 6.880000e-111 412.0
32 TraesCS1B01G219500 chr3A 89.856 1321 81 16 2099 3370 724741329 724740013 0.000000e+00 1648.0
33 TraesCS1B01G219500 chr5B 90.902 1242 82 14 2107 3319 176601886 176600647 0.000000e+00 1639.0
34 TraesCS1B01G219500 chr5B 89.846 1300 88 14 2107 3371 43868189 43869479 0.000000e+00 1629.0
35 TraesCS1B01G219500 chr5B 90.135 1257 72 11 2103 3326 130923655 130924892 0.000000e+00 1587.0
36 TraesCS1B01G219500 chr5B 86.122 1297 118 28 2107 3359 458731739 458733017 0.000000e+00 1341.0
37 TraesCS1B01G219500 chr5B 87.310 197 22 3 631 825 643675159 643675354 1.240000e-53 222.0
38 TraesCS1B01G219500 chr3D 90.113 1244 63 13 2107 3311 268942688 268943910 0.000000e+00 1561.0
39 TraesCS1B01G219500 chr3D 89.050 1242 89 22 2106 3320 609940258 609941479 0.000000e+00 1496.0
40 TraesCS1B01G219500 chr3D 96.078 357 10 4 4107 4463 268944825 268945177 6.410000e-161 579.0
41 TraesCS1B01G219500 chr3D 94.545 275 15 0 3864 4138 268944536 268944810 8.830000e-115 425.0
42 TraesCS1B01G219500 chr3D 96.512 86 3 0 8812 8897 22679060 22679145 9.960000e-30 143.0
43 TraesCS1B01G219500 chr3D 96.512 86 3 0 8812 8897 22767898 22767813 9.960000e-30 143.0
44 TraesCS1B01G219500 chr3D 95.506 89 4 0 8808 8896 436676896 436676984 9.960000e-30 143.0
45 TraesCS1B01G219500 chr3D 93.478 92 6 0 8806 8897 206978506 206978597 4.630000e-28 137.0
46 TraesCS1B01G219500 chr3D 90.625 96 8 1 8802 8896 71371425 71371520 1.000000e-24 126.0
47 TraesCS1B01G219500 chr4B 91.872 1095 59 12 2107 3174 73279972 73278881 0.000000e+00 1502.0
48 TraesCS1B01G219500 chr4B 86.521 1328 99 22 2107 3371 416388677 416387367 0.000000e+00 1387.0
49 TraesCS1B01G219500 chr4B 91.497 294 23 2 3864 4156 285614210 285613918 4.140000e-108 403.0
50 TraesCS1B01G219500 chr4B 84.127 63 10 0 4907 4969 665560660 665560722 2.870000e-05 62.1
51 TraesCS1B01G219500 chr4B 94.444 36 2 0 4683 4718 660956282 660956317 1.000000e-03 56.5
52 TraesCS1B01G219500 chr6B 91.221 991 58 12 2107 3071 502312717 502313704 0.000000e+00 1321.0
53 TraesCS1B01G219500 chr6B 94.182 275 16 0 3864 4138 308581809 308581535 4.110000e-113 420.0
54 TraesCS1B01G219500 chr6B 92.391 92 7 0 8812 8903 48874123 48874032 2.160000e-26 132.0
55 TraesCS1B01G219500 chr2B 89.399 632 43 11 3864 4472 407871291 407870661 0.000000e+00 774.0
56 TraesCS1B01G219500 chr2B 93.663 505 30 2 3957 4460 302079284 302078781 0.000000e+00 754.0
57 TraesCS1B01G219500 chr7B 91.159 509 38 7 3956 4462 285399555 285400058 0.000000e+00 684.0
58 TraesCS1B01G219500 chr7D 85.505 545 64 11 3898 4435 267595150 267594614 1.080000e-153 555.0
59 TraesCS1B01G219500 chr7D 85.185 270 35 5 641 907 58622928 58622661 1.220000e-68 272.0
60 TraesCS1B01G219500 chr7A 84.307 274 36 7 638 907 62883753 62883483 2.640000e-65 261.0
61 TraesCS1B01G219500 chr5A 84.364 275 33 10 638 907 641056483 641056752 2.640000e-65 261.0
62 TraesCS1B01G219500 chr5A 84.249 273 32 10 640 907 645126059 645126325 1.230000e-63 255.0
63 TraesCS1B01G219500 chr5A 83.212 274 38 8 638 907 641117088 641117357 2.650000e-60 244.0
64 TraesCS1B01G219500 chr5A 87.065 201 23 3 638 836 540262718 540262917 3.460000e-54 224.0
65 TraesCS1B01G219500 chr5A 94.444 36 2 0 4683 4718 701580173 701580208 1.000000e-03 56.5
66 TraesCS1B01G219500 chr4A 87.611 226 23 5 638 860 675160309 675160086 3.410000e-64 257.0
67 TraesCS1B01G219500 chr4A 86.667 225 27 3 638 860 675219513 675219290 7.380000e-61 246.0
68 TraesCS1B01G219500 chr4A 86.222 225 28 3 638 860 675277041 675276818 3.430000e-59 241.0
69 TraesCS1B01G219500 chr5D 89.655 203 17 4 625 825 512894200 512894400 1.230000e-63 255.0
70 TraesCS1B01G219500 chr5D 89.055 201 19 3 638 836 425984488 425984687 7.380000e-61 246.0
71 TraesCS1B01G219500 chr5D 88.360 189 20 2 638 824 512778166 512778354 9.610000e-55 226.0
72 TraesCS1B01G219500 chr5D 94.444 90 5 0 8812 8901 421993687 421993598 1.290000e-28 139.0
73 TraesCS1B01G219500 chr5D 93.407 91 6 0 8808 8898 551403900 551403990 1.670000e-27 135.0
74 TraesCS1B01G219500 chr4D 95.294 85 3 1 8812 8896 16652516 16652433 5.990000e-27 134.0
75 TraesCS1B01G219500 chr4D 94.186 86 5 0 8812 8897 414221193 414221108 2.160000e-26 132.0
76 TraesCS1B01G219500 chr4D 89.583 96 10 0 8802 8897 64347351 64347446 1.300000e-23 122.0
77 TraesCS1B01G219500 chrUn 91.667 96 7 1 8802 8896 101630789 101630884 2.160000e-26 132.0
78 TraesCS1B01G219500 chrUn 90.426 94 9 0 8812 8905 110290532 110290439 3.610000e-24 124.0
79 TraesCS1B01G219500 chrUn 90.426 94 9 0 8812 8905 187683241 187683148 3.610000e-24 124.0
80 TraesCS1B01G219500 chrUn 90.426 94 9 0 8812 8905 307658663 307658756 3.610000e-24 124.0
81 TraesCS1B01G219500 chrUn 91.860 86 7 0 8812 8897 28955520 28955435 4.670000e-23 121.0
82 TraesCS1B01G219500 chrUn 91.860 86 7 0 8811 8896 301350027 301349942 4.670000e-23 121.0
83 TraesCS1B01G219500 chrUn 92.857 84 5 1 8811 8894 320256097 320256179 4.670000e-23 121.0
84 TraesCS1B01G219500 chrUn 91.860 86 7 0 8811 8896 348118208 348118293 4.670000e-23 121.0
85 TraesCS1B01G219500 chrUn 92.857 84 5 1 8811 8894 357700747 357700829 4.670000e-23 121.0
86 TraesCS1B01G219500 chrUn 94.444 36 2 0 4683 4718 110998111 110998146 1.000000e-03 56.5
87 TraesCS1B01G219500 chrUn 94.444 36 2 0 4683 4718 111056215 111056250 1.000000e-03 56.5
88 TraesCS1B01G219500 chr6D 92.473 93 6 1 8809 8900 7985430 7985338 2.160000e-26 132.0
89 TraesCS1B01G219500 chr6D 92.941 85 6 0 8812 8896 105560464 105560548 3.610000e-24 124.0
90 TraesCS1B01G219500 chr6D 91.209 91 8 0 8812 8902 196357993 196357903 3.610000e-24 124.0
91 TraesCS1B01G219500 chr6D 91.954 87 7 0 8810 8896 81224513 81224599 1.300000e-23 122.0
92 TraesCS1B01G219500 chr6D 91.954 87 7 0 8811 8897 460470345 460470431 1.300000e-23 122.0
93 TraesCS1B01G219500 chr6D 90.217 92 9 0 8812 8903 26814981 26814890 4.670000e-23 121.0
94 TraesCS1B01G219500 chr6D 90.217 92 9 0 8812 8903 26895069 26894978 4.670000e-23 121.0
95 TraesCS1B01G219500 chr6D 90.323 93 8 1 8805 8896 461008458 461008366 4.670000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G219500 chr1B 396596928 396606441 9513 True 8331.000000 10436 100.000000 1 9514 2 chr1B.!!$R6 9513
1 TraesCS1B01G219500 chr1B 312926243 312927494 1251 True 1496.000000 1496 88.676000 2151 3370 1 chr1B.!!$R1 1219
2 TraesCS1B01G219500 chr1B 385167220 385168311 1091 False 1496.000000 1496 91.781000 2107 3174 1 chr1B.!!$F3 1067
3 TraesCS1B01G219500 chr1B 401785870 401787130 1260 True 1491.000000 1491 88.106000 2107 3371 1 chr1B.!!$R3 1264
4 TraesCS1B01G219500 chr1B 652523090 652524228 1138 True 1286.000000 1286 87.522000 2255 3366 1 chr1B.!!$R5 1111
5 TraesCS1B01G219500 chr1B 326772095 326773105 1010 True 1245.000000 1245 89.635000 2107 3074 1 chr1B.!!$R2 967
6 TraesCS1B01G219500 chr1B 57106899 57107514 615 False 806.000000 806 90.777000 3865 4462 1 chr1B.!!$F1 597
7 TraesCS1B01G219500 chr1B 359443898 359444408 510 False 728.000000 728 92.578000 3958 4462 1 chr1B.!!$F2 504
8 TraesCS1B01G219500 chr1D 295274695 295281719 7024 True 2385.500000 4130 95.262500 1 8652 4 chr1D.!!$R2 8651
9 TraesCS1B01G219500 chr1D 295186801 295187337 536 True 915.000000 915 97.393000 8978 9514 1 chr1D.!!$R1 536
10 TraesCS1B01G219500 chr1A 368364298 368369944 5646 True 972.666667 1932 94.675667 5539 9514 6 chr1A.!!$R1 3975
11 TraesCS1B01G219500 chr1A 368375326 368377053 1727 True 916.666667 1672 95.494667 1404 5543 3 chr1A.!!$R2 4139
12 TraesCS1B01G219500 chr3B 522241127 522242290 1163 False 1766.000000 1766 94.421000 2107 3245 1 chr3B.!!$F3 1138
13 TraesCS1B01G219500 chr3B 508752436 508753725 1289 False 1572.000000 1572 89.164000 2107 3359 1 chr3B.!!$F2 1252
14 TraesCS1B01G219500 chr3B 790745005 790747349 2344 True 1126.500000 1676 93.558000 2107 4465 2 chr3B.!!$R2 2358
15 TraesCS1B01G219500 chr3B 181301208 181301813 605 True 926.000000 926 94.137000 3864 4476 1 chr3B.!!$R1 612
16 TraesCS1B01G219500 chr3A 724740013 724741329 1316 True 1648.000000 1648 89.856000 2099 3370 1 chr3A.!!$R1 1271
17 TraesCS1B01G219500 chr5B 176600647 176601886 1239 True 1639.000000 1639 90.902000 2107 3319 1 chr5B.!!$R1 1212
18 TraesCS1B01G219500 chr5B 43868189 43869479 1290 False 1629.000000 1629 89.846000 2107 3371 1 chr5B.!!$F1 1264
19 TraesCS1B01G219500 chr5B 130923655 130924892 1237 False 1587.000000 1587 90.135000 2103 3326 1 chr5B.!!$F2 1223
20 TraesCS1B01G219500 chr5B 458731739 458733017 1278 False 1341.000000 1341 86.122000 2107 3359 1 chr5B.!!$F3 1252
21 TraesCS1B01G219500 chr3D 609940258 609941479 1221 False 1496.000000 1496 89.050000 2106 3320 1 chr3D.!!$F5 1214
22 TraesCS1B01G219500 chr3D 268942688 268945177 2489 False 855.000000 1561 93.578667 2107 4463 3 chr3D.!!$F6 2356
23 TraesCS1B01G219500 chr4B 73278881 73279972 1091 True 1502.000000 1502 91.872000 2107 3174 1 chr4B.!!$R1 1067
24 TraesCS1B01G219500 chr4B 416387367 416388677 1310 True 1387.000000 1387 86.521000 2107 3371 1 chr4B.!!$R3 1264
25 TraesCS1B01G219500 chr6B 502312717 502313704 987 False 1321.000000 1321 91.221000 2107 3071 1 chr6B.!!$F1 964
26 TraesCS1B01G219500 chr2B 407870661 407871291 630 True 774.000000 774 89.399000 3864 4472 1 chr2B.!!$R2 608
27 TraesCS1B01G219500 chr2B 302078781 302079284 503 True 754.000000 754 93.663000 3957 4460 1 chr2B.!!$R1 503
28 TraesCS1B01G219500 chr7B 285399555 285400058 503 False 684.000000 684 91.159000 3956 4462 1 chr7B.!!$F1 506
29 TraesCS1B01G219500 chr7D 267594614 267595150 536 True 555.000000 555 85.505000 3898 4435 1 chr7D.!!$R2 537


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 509 0.106167 ATAGCGGCTGTAGGGTCTCA 60.106 55.000 13.86 0.00 0.00 3.27 F
725 745 0.109689 CGACGTTCACTCTCCCACTC 60.110 60.000 0.00 0.00 0.00 3.51 F
1921 1952 0.548682 AACCAGCTCCTCCCTGTCAT 60.549 55.000 0.00 0.00 0.00 3.06 F
2935 2998 0.111253 AAGGGCAACTTGGAGGAGTG 59.889 55.000 0.00 0.00 38.21 3.51 F
3082 3145 0.105964 CGTGGACTGGACTTGGTGAA 59.894 55.000 0.00 0.00 0.00 3.18 F
3084 3147 0.108585 TGGACTGGACTTGGTGAAGC 59.891 55.000 0.00 0.00 31.68 3.86 F
4437 6918 0.396811 CCCTAAGACTAATGGGCCCG 59.603 60.000 19.37 4.81 32.49 6.13 F
5551 8642 1.745115 GTAGCTTGTGCATGCCCGA 60.745 57.895 16.68 1.77 42.74 5.14 F
7353 10945 1.480498 GGGTTTCCAGAAGGCTTTCCA 60.480 52.381 4.73 0.00 33.64 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1630 1661 0.253327 GAACCTCCAGTCCATCCACC 59.747 60.000 0.00 0.00 0.00 4.61 R
2716 2774 0.030638 GTGCGGTGCAAATCAACAGT 59.969 50.000 0.00 0.00 41.47 3.55 R
3063 3126 0.105964 TTCACCAAGTCCAGTCCACG 59.894 55.000 0.00 0.00 0.00 4.94 R
4027 6466 1.201424 GATCACCGGGGTCCTTAACT 58.799 55.000 2.12 0.00 0.00 2.24 R
4523 7004 1.518367 GGTTCATCACCCCCTGGATA 58.482 55.000 0.00 0.00 40.19 2.59 R
4705 7785 2.739932 GCAAGATCTGCCGTAGACATGT 60.740 50.000 0.00 0.00 46.13 3.21 R
6168 9395 0.514691 CCTGTCGCTTTGAGCTTGAC 59.485 55.000 0.00 0.48 39.60 3.18 R
7443 11048 2.560504 TGTCAGTTACAAGTGCCACAG 58.439 47.619 0.00 0.00 34.29 3.66 R
8978 13983 0.179048 TGACCGCCATGCTTAGATGG 60.179 55.000 0.00 0.00 45.20 3.51 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.458588 AGAGGAGGCGGGGATCTTC 60.459 63.158 0.00 0.00 0.00 2.87
163 164 3.056607 GCTTGATAGCTCCTCTCCTCATC 60.057 52.174 0.00 0.00 44.27 2.92
166 167 1.540115 TAGCTCCTCTCCTCATCCCT 58.460 55.000 0.00 0.00 0.00 4.20
168 169 1.047801 GCTCCTCTCCTCATCCCTTC 58.952 60.000 0.00 0.00 0.00 3.46
171 172 1.366082 TCCTCTCCTCATCCCTTCCAA 59.634 52.381 0.00 0.00 0.00 3.53
193 194 3.855689 AAAAACAATCATCAGCTCCCG 57.144 42.857 0.00 0.00 0.00 5.14
243 245 1.599797 CCGGCGAGGTTTCCTGTTT 60.600 57.895 9.30 0.00 31.76 2.83
259 261 3.428999 CCTGTTTACCTGACGTCGATGAT 60.429 47.826 12.58 0.00 0.00 2.45
344 346 1.622173 GCCATCAATCCTCCCCCAAAA 60.622 52.381 0.00 0.00 0.00 2.44
365 367 4.769345 ATCAAATCTTCCTCCCTCTGTC 57.231 45.455 0.00 0.00 0.00 3.51
374 376 1.135333 CCTCCCTCTGTCTACGCTTTC 59.865 57.143 0.00 0.00 0.00 2.62
413 418 8.457238 AGACCTAAATATTTCTGCAGAATTCC 57.543 34.615 28.89 10.66 33.54 3.01
414 419 7.227512 AGACCTAAATATTTCTGCAGAATTCCG 59.772 37.037 28.89 15.01 33.54 4.30
415 420 6.145535 CCTAAATATTTCTGCAGAATTCCGC 58.854 40.000 28.89 6.71 33.54 5.54
416 421 5.841957 AAATATTTCTGCAGAATTCCGCT 57.158 34.783 28.89 10.29 33.54 5.52
417 422 5.841957 AATATTTCTGCAGAATTCCGCTT 57.158 34.783 28.89 13.84 33.54 4.68
418 423 5.841957 ATATTTCTGCAGAATTCCGCTTT 57.158 34.783 28.89 9.65 33.54 3.51
419 424 3.559238 TTTCTGCAGAATTCCGCTTTC 57.441 42.857 28.89 0.00 33.54 2.62
430 435 5.411053 AGAATTCCGCTTTCTTTCTCTTCAG 59.589 40.000 0.65 0.00 29.12 3.02
442 447 3.685139 TCTCTTCAGGAAATTCGCACT 57.315 42.857 0.00 0.00 0.00 4.40
452 467 7.693952 TCAGGAAATTCGCACTTTAATGTATC 58.306 34.615 0.00 0.00 0.00 2.24
480 495 8.733857 ATGAAAAGAAAGAGAAAACAATAGCG 57.266 30.769 0.00 0.00 0.00 4.26
494 509 0.106167 ATAGCGGCTGTAGGGTCTCA 60.106 55.000 13.86 0.00 0.00 3.27
507 522 7.361286 GCTGTAGGGTCTCAAATGAAAAGTTAG 60.361 40.741 0.00 0.00 0.00 2.34
549 567 9.347240 CCTCATGGACTATGAAGATAAATTGTT 57.653 33.333 2.89 0.00 44.84 2.83
582 600 9.807921 AGAAACAAGGTCTAAAGGATGAAAATA 57.192 29.630 0.00 0.00 0.00 1.40
609 627 7.898014 ATTTTACAGGAAACTTTCAGACCTT 57.102 32.000 3.93 0.00 40.21 3.50
622 640 9.847224 AACTTTCAGACCTTAAGAATAAACTGA 57.153 29.630 3.36 6.59 30.88 3.41
625 643 9.490379 TTTCAGACCTTAAGAATAAACTGAGAC 57.510 33.333 3.36 0.00 32.63 3.36
626 644 8.190326 TCAGACCTTAAGAATAAACTGAGACA 57.810 34.615 3.36 0.00 30.14 3.41
699 719 1.339097 GACGCATACCCCTCTACCAT 58.661 55.000 0.00 0.00 0.00 3.55
725 745 0.109689 CGACGTTCACTCTCCCACTC 60.110 60.000 0.00 0.00 0.00 3.51
767 787 1.667151 CCACCAAGTGCAATGTGGG 59.333 57.895 14.14 6.94 43.60 4.61
799 819 1.299648 CCACGGGCCTTCTTGATCA 59.700 57.895 0.84 0.00 0.00 2.92
802 822 1.201429 ACGGGCCTTCTTGATCACCT 61.201 55.000 0.84 0.00 0.00 4.00
812 832 0.834261 TTGATCACCTGTCGACCCCA 60.834 55.000 14.12 0.00 0.00 4.96
836 856 6.100404 TCCAGGTAAGTATGTTACAACGTT 57.900 37.500 0.00 0.00 0.00 3.99
838 858 5.927689 CCAGGTAAGTATGTTACAACGTTGA 59.072 40.000 33.66 15.02 0.00 3.18
841 861 6.643770 AGGTAAGTATGTTACAACGTTGACAG 59.356 38.462 33.66 8.62 0.00 3.51
912 932 3.369157 GGCGAGGTGGTACTAAACATCTT 60.369 47.826 0.00 0.00 0.00 2.40
921 941 1.339727 ACTAAACATCTTGACCCCCGC 60.340 52.381 0.00 0.00 0.00 6.13
1033 1053 2.045242 GCCCCGAAAACCTCCTCC 60.045 66.667 0.00 0.00 0.00 4.30
1239 1261 4.821589 GAAGCGCCGGTGGAGGAG 62.822 72.222 18.41 0.00 0.00 3.69
1283 1305 4.973055 TGCGGCGGTTAGTGCGTT 62.973 61.111 9.78 0.00 0.00 4.84
1285 1307 3.075085 GCGGCGGTTAGTGCGTTAC 62.075 63.158 9.78 0.00 0.00 2.50
1323 1354 2.232298 CTTCCAGCTCGGGTGAGGAC 62.232 65.000 4.90 0.00 42.79 3.85
1329 1360 2.758327 TCGGGTGAGGACGATGGG 60.758 66.667 0.00 0.00 33.69 4.00
1499 1530 1.873591 CCTTGTGCTGTGTGGTTCTAC 59.126 52.381 0.00 0.00 0.00 2.59
1502 1533 2.833794 TGTGCTGTGTGGTTCTACTTC 58.166 47.619 0.00 0.00 0.00 3.01
1503 1534 2.434336 TGTGCTGTGTGGTTCTACTTCT 59.566 45.455 0.00 0.00 0.00 2.85
1504 1535 3.639561 TGTGCTGTGTGGTTCTACTTCTA 59.360 43.478 0.00 0.00 0.00 2.10
1505 1536 4.238514 GTGCTGTGTGGTTCTACTTCTAG 58.761 47.826 0.00 0.00 0.00 2.43
1506 1537 3.895656 TGCTGTGTGGTTCTACTTCTAGT 59.104 43.478 0.00 0.00 0.00 2.57
1507 1538 4.344102 TGCTGTGTGGTTCTACTTCTAGTT 59.656 41.667 0.00 0.00 0.00 2.24
1575 1606 1.927895 CGGATTAGCAGAGACCACAC 58.072 55.000 0.00 0.00 0.00 3.82
1628 1659 4.824479 TGGAGCTGATGTGATTTCAGTA 57.176 40.909 0.00 0.00 42.12 2.74
1630 1661 5.121105 TGGAGCTGATGTGATTTCAGTATG 58.879 41.667 0.00 0.00 42.12 2.39
1768 1799 5.448654 TGCTATGTGATTTTAAGCCTGGAT 58.551 37.500 0.00 0.00 32.14 3.41
1921 1952 0.548682 AACCAGCTCCTCCCTGTCAT 60.549 55.000 0.00 0.00 0.00 3.06
1937 1968 4.036734 CCTGTCATACTGTGTTTTGCTTGT 59.963 41.667 0.00 0.00 0.00 3.16
1982 2013 4.537135 TGCCGAGTTAAGATTGTCTCTT 57.463 40.909 0.00 0.00 46.16 2.85
2059 2090 1.476488 CCTTTGGTCTAAAATGGGCCG 59.524 52.381 0.00 0.00 0.00 6.13
2062 2093 0.693622 TGGTCTAAAATGGGCCGTCA 59.306 50.000 0.00 0.00 0.00 4.35
2418 2450 4.198028 ACCAACTTATAACCACGACTCC 57.802 45.455 0.00 0.00 0.00 3.85
2716 2774 3.068691 CTTCTCCCTGCCGGACGA 61.069 66.667 5.05 0.00 34.86 4.20
2723 2781 2.338620 CTGCCGGACGACTGTTGA 59.661 61.111 5.05 0.00 0.00 3.18
2766 2824 1.078143 AGGGCTTGCGATGGAGAAC 60.078 57.895 0.00 0.00 0.00 3.01
2883 2946 3.106986 ATGCCCAAGATCCCCGACG 62.107 63.158 0.00 0.00 0.00 5.12
2934 2997 0.402121 GAAGGGCAACTTGGAGGAGT 59.598 55.000 0.00 0.00 40.21 3.85
2935 2998 0.111253 AAGGGCAACTTGGAGGAGTG 59.889 55.000 0.00 0.00 38.21 3.51
2936 2999 1.303643 GGGCAACTTGGAGGAGTGG 60.304 63.158 0.00 0.00 0.00 4.00
2937 3000 1.973812 GGCAACTTGGAGGAGTGGC 60.974 63.158 0.00 0.00 44.29 5.01
2938 3001 1.228245 GCAACTTGGAGGAGTGGCA 60.228 57.895 0.00 0.00 44.39 4.92
2939 3002 0.610232 GCAACTTGGAGGAGTGGCAT 60.610 55.000 0.00 0.00 44.39 4.40
2940 3003 1.457346 CAACTTGGAGGAGTGGCATC 58.543 55.000 0.00 0.00 0.00 3.91
2941 3004 1.004044 CAACTTGGAGGAGTGGCATCT 59.996 52.381 0.00 0.00 0.00 2.90
2942 3005 0.617413 ACTTGGAGGAGTGGCATCTG 59.383 55.000 0.00 0.00 0.00 2.90
2943 3006 0.747283 CTTGGAGGAGTGGCATCTGC 60.747 60.000 0.00 0.00 41.14 4.26
2944 3007 1.491274 TTGGAGGAGTGGCATCTGCA 61.491 55.000 4.33 8.03 44.36 4.41
2945 3008 1.153208 GGAGGAGTGGCATCTGCAG 60.153 63.158 7.63 7.63 44.36 4.41
2946 3009 1.620739 GGAGGAGTGGCATCTGCAGA 61.621 60.000 20.79 20.79 44.36 4.26
2947 3010 0.461693 GAGGAGTGGCATCTGCAGAC 60.462 60.000 20.97 7.23 44.36 3.51
2948 3011 1.451028 GGAGTGGCATCTGCAGACC 60.451 63.158 20.97 17.44 44.36 3.85
2949 3012 1.297689 GAGTGGCATCTGCAGACCA 59.702 57.895 20.97 20.05 44.36 4.02
2950 3013 3.583383 GTGGCATCTGCAGACCAC 58.417 61.111 30.10 30.10 45.22 4.16
2951 3014 2.046988 TGGCATCTGCAGACCACG 60.047 61.111 20.97 9.19 44.36 4.94
2952 3015 3.503363 GGCATCTGCAGACCACGC 61.503 66.667 20.97 18.36 44.36 5.34
2953 3016 2.743538 GCATCTGCAGACCACGCA 60.744 61.111 20.97 0.00 41.59 5.24
2954 3017 2.110967 GCATCTGCAGACCACGCAT 61.111 57.895 20.97 0.00 39.02 4.73
2955 3018 2.012237 CATCTGCAGACCACGCATC 58.988 57.895 20.97 0.00 39.02 3.91
2956 3019 0.461516 CATCTGCAGACCACGCATCT 60.462 55.000 20.97 0.00 39.02 2.90
2957 3020 0.179089 ATCTGCAGACCACGCATCTC 60.179 55.000 20.97 0.00 39.02 2.75
2958 3021 1.812922 CTGCAGACCACGCATCTCC 60.813 63.158 8.42 0.00 39.02 3.71
2959 3022 2.512515 GCAGACCACGCATCTCCC 60.513 66.667 0.00 0.00 0.00 4.30
2960 3023 2.202797 CAGACCACGCATCTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
2961 3024 4.148825 AGACCACGCATCTCCCGC 62.149 66.667 0.00 0.00 0.00 6.13
2962 3025 4.451150 GACCACGCATCTCCCGCA 62.451 66.667 0.00 0.00 0.00 5.69
2963 3026 4.760047 ACCACGCATCTCCCGCAC 62.760 66.667 0.00 0.00 0.00 5.34
2964 3027 4.758251 CCACGCATCTCCCGCACA 62.758 66.667 0.00 0.00 0.00 4.57
2965 3028 2.512286 CACGCATCTCCCGCACAT 60.512 61.111 0.00 0.00 0.00 3.21
2966 3029 2.512286 ACGCATCTCCCGCACATG 60.512 61.111 0.00 0.00 0.00 3.21
2967 3030 3.945434 CGCATCTCCCGCACATGC 61.945 66.667 0.00 0.00 39.70 4.06
2968 3031 3.589881 GCATCTCCCGCACATGCC 61.590 66.667 0.00 0.00 37.54 4.40
2969 3032 3.274586 CATCTCCCGCACATGCCG 61.275 66.667 0.00 0.00 37.91 5.69
2970 3033 3.469970 ATCTCCCGCACATGCCGA 61.470 61.111 7.82 0.00 37.91 5.54
2971 3034 3.740128 ATCTCCCGCACATGCCGAC 62.740 63.158 7.82 0.00 37.91 4.79
2972 3035 4.758251 CTCCCGCACATGCCGACA 62.758 66.667 7.82 0.00 37.91 4.35
2975 3038 4.088762 CCGCACATGCCGACACAC 62.089 66.667 7.82 0.00 37.91 3.82
2976 3039 3.043713 CGCACATGCCGACACACT 61.044 61.111 0.00 0.00 37.91 3.55
2977 3040 1.736282 CGCACATGCCGACACACTA 60.736 57.895 0.00 0.00 37.91 2.74
2978 3041 1.686566 CGCACATGCCGACACACTAG 61.687 60.000 0.00 0.00 37.91 2.57
2979 3042 1.361668 GCACATGCCGACACACTAGG 61.362 60.000 0.00 0.00 34.31 3.02
2980 3043 0.246360 CACATGCCGACACACTAGGA 59.754 55.000 0.00 0.00 0.00 2.94
2981 3044 0.532573 ACATGCCGACACACTAGGAG 59.467 55.000 0.00 0.00 0.00 3.69
2982 3045 0.179100 CATGCCGACACACTAGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
2983 3046 1.961180 ATGCCGACACACTAGGAGGC 61.961 60.000 0.00 0.00 44.38 4.70
2984 3047 2.893398 CCGACACACTAGGAGGCC 59.107 66.667 0.00 0.00 0.00 5.19
2985 3048 2.490217 CGACACACTAGGAGGCCG 59.510 66.667 0.00 0.00 0.00 6.13
2986 3049 2.184579 GACACACTAGGAGGCCGC 59.815 66.667 0.00 0.00 0.00 6.53
2987 3050 3.701604 GACACACTAGGAGGCCGCG 62.702 68.421 0.00 0.00 0.00 6.46
3010 3073 2.281970 CAGCCTGCAGCCTCACAA 60.282 61.111 8.66 0.00 45.47 3.33
3011 3074 2.282040 AGCCTGCAGCCTCACAAC 60.282 61.111 8.66 0.00 45.47 3.32
3012 3075 3.368571 GCCTGCAGCCTCACAACC 61.369 66.667 8.66 0.00 34.35 3.77
3013 3076 3.052082 CCTGCAGCCTCACAACCG 61.052 66.667 8.66 0.00 0.00 4.44
3014 3077 3.730761 CTGCAGCCTCACAACCGC 61.731 66.667 0.00 0.00 0.00 5.68
3017 3080 4.680237 CAGCCTCACAACCGCCGA 62.680 66.667 0.00 0.00 0.00 5.54
3018 3081 4.681978 AGCCTCACAACCGCCGAC 62.682 66.667 0.00 0.00 0.00 4.79
3019 3082 4.980805 GCCTCACAACCGCCGACA 62.981 66.667 0.00 0.00 0.00 4.35
3020 3083 3.041940 CCTCACAACCGCCGACAC 61.042 66.667 0.00 0.00 0.00 3.67
3021 3084 3.403057 CTCACAACCGCCGACACG 61.403 66.667 0.00 0.00 0.00 4.49
3022 3085 4.210093 TCACAACCGCCGACACGT 62.210 61.111 0.00 0.00 0.00 4.49
3023 3086 3.995669 CACAACCGCCGACACGTG 61.996 66.667 15.48 15.48 0.00 4.49
3041 3104 2.280186 GCGGGTAGCGATCCAAGG 60.280 66.667 0.00 0.00 35.41 3.61
3042 3105 2.280186 CGGGTAGCGATCCAAGGC 60.280 66.667 0.00 0.00 0.00 4.35
3043 3106 2.280186 GGGTAGCGATCCAAGGCG 60.280 66.667 0.00 0.00 0.00 5.52
3044 3107 2.280186 GGTAGCGATCCAAGGCGG 60.280 66.667 0.00 0.00 0.00 6.13
3059 3122 2.254350 CGGAAGCAGTGACGACGA 59.746 61.111 0.00 0.00 0.00 4.20
3060 3123 1.797933 CGGAAGCAGTGACGACGAG 60.798 63.158 0.00 0.00 0.00 4.18
3061 3124 1.444553 GGAAGCAGTGACGACGAGG 60.445 63.158 0.00 0.00 0.00 4.63
3062 3125 1.444553 GAAGCAGTGACGACGAGGG 60.445 63.158 0.00 0.00 0.00 4.30
3063 3126 3.575351 AAGCAGTGACGACGAGGGC 62.575 63.158 0.00 0.00 0.00 5.19
3074 3137 4.436998 CGAGGGCGTGGACTGGAC 62.437 72.222 0.00 0.00 0.00 4.02
3075 3138 2.997897 GAGGGCGTGGACTGGACT 60.998 66.667 0.00 0.00 0.00 3.85
3076 3139 2.526873 AGGGCGTGGACTGGACTT 60.527 61.111 0.00 0.00 0.00 3.01
3077 3140 2.358737 GGGCGTGGACTGGACTTG 60.359 66.667 0.00 0.00 0.00 3.16
3078 3141 2.358737 GGCGTGGACTGGACTTGG 60.359 66.667 0.00 0.00 0.00 3.61
3079 3142 2.426023 GCGTGGACTGGACTTGGT 59.574 61.111 0.00 0.00 0.00 3.67
3080 3143 1.961277 GCGTGGACTGGACTTGGTG 60.961 63.158 0.00 0.00 0.00 4.17
3081 3144 1.745890 CGTGGACTGGACTTGGTGA 59.254 57.895 0.00 0.00 0.00 4.02
3082 3145 0.105964 CGTGGACTGGACTTGGTGAA 59.894 55.000 0.00 0.00 0.00 3.18
3083 3146 1.873903 CGTGGACTGGACTTGGTGAAG 60.874 57.143 0.00 0.00 35.07 3.02
3084 3147 0.108585 TGGACTGGACTTGGTGAAGC 59.891 55.000 0.00 0.00 31.68 3.86
3085 3148 0.951040 GGACTGGACTTGGTGAAGCG 60.951 60.000 0.00 0.00 31.68 4.68
3086 3149 0.951040 GACTGGACTTGGTGAAGCGG 60.951 60.000 0.00 0.00 31.68 5.52
3087 3150 1.672356 CTGGACTTGGTGAAGCGGG 60.672 63.158 0.00 0.00 31.68 6.13
3088 3151 2.111999 CTGGACTTGGTGAAGCGGGA 62.112 60.000 0.00 0.00 31.68 5.14
3089 3152 1.671379 GGACTTGGTGAAGCGGGAC 60.671 63.158 0.00 0.00 31.68 4.46
3090 3153 1.371558 GACTTGGTGAAGCGGGACT 59.628 57.895 0.00 0.00 31.68 3.85
3091 3154 0.670854 GACTTGGTGAAGCGGGACTC 60.671 60.000 0.00 0.00 31.68 3.36
3092 3155 1.376037 CTTGGTGAAGCGGGACTCC 60.376 63.158 0.00 0.00 0.00 3.85
3093 3156 1.831652 CTTGGTGAAGCGGGACTCCT 61.832 60.000 0.00 0.00 0.00 3.69
3094 3157 2.111999 TTGGTGAAGCGGGACTCCTG 62.112 60.000 0.00 0.00 0.00 3.86
3120 3183 4.899239 GTCGATGCGGGGCCAGAG 62.899 72.222 8.22 0.00 0.00 3.35
3240 3303 4.856801 GCGGTGGTGGCGATGGAT 62.857 66.667 0.00 0.00 0.00 3.41
3241 3304 2.896854 CGGTGGTGGCGATGGATG 60.897 66.667 0.00 0.00 0.00 3.51
3242 3305 2.516930 GGTGGTGGCGATGGATGG 60.517 66.667 0.00 0.00 0.00 3.51
3243 3306 3.211963 GTGGTGGCGATGGATGGC 61.212 66.667 0.00 0.00 0.00 4.40
3244 3307 3.726144 TGGTGGCGATGGATGGCA 61.726 61.111 0.00 0.00 39.86 4.92
3245 3308 2.440065 GGTGGCGATGGATGGCAA 60.440 61.111 0.00 0.00 44.01 4.52
3246 3309 2.774799 GGTGGCGATGGATGGCAAC 61.775 63.158 0.00 0.00 44.01 4.17
3247 3310 1.750399 GTGGCGATGGATGGCAACT 60.750 57.895 0.00 0.00 44.01 3.16
3248 3311 1.750018 TGGCGATGGATGGCAACTG 60.750 57.895 0.00 0.00 39.13 3.16
3249 3312 2.410469 GCGATGGATGGCAACTGC 59.590 61.111 0.00 0.00 41.14 4.40
3250 3313 2.409055 GCGATGGATGGCAACTGCA 61.409 57.895 3.76 0.00 44.36 4.41
3251 3314 1.725665 CGATGGATGGCAACTGCAG 59.274 57.895 13.48 13.48 44.36 4.41
3252 3315 1.436336 GATGGATGGCAACTGCAGC 59.564 57.895 15.27 0.00 44.36 5.25
3253 3316 2.332362 GATGGATGGCAACTGCAGCG 62.332 60.000 15.27 6.49 44.36 5.18
3254 3317 2.747460 GGATGGCAACTGCAGCGA 60.747 61.111 15.27 0.00 44.36 4.93
3255 3318 2.482374 GATGGCAACTGCAGCGAC 59.518 61.111 15.27 8.31 44.36 5.19
3256 3319 3.372676 GATGGCAACTGCAGCGACG 62.373 63.158 15.27 0.28 44.36 5.12
3998 6437 3.330720 GGGCTGGCCAGGTACAGT 61.331 66.667 33.46 0.00 37.07 3.55
4027 6466 2.338015 GGACGGCTGTGACGAGGTA 61.338 63.158 0.80 0.00 35.20 3.08
4031 6470 0.806868 CGGCTGTGACGAGGTAGTTA 59.193 55.000 0.00 0.00 35.20 2.24
4052 6491 1.075896 GACCCCGGTGATCTCCTCT 60.076 63.158 11.86 0.00 0.00 3.69
4437 6918 0.396811 CCCTAAGACTAATGGGCCCG 59.603 60.000 19.37 4.81 32.49 6.13
4465 6946 5.010415 GGCCCATTACGTACTCTAACACTAT 59.990 44.000 0.00 0.00 0.00 2.12
4466 6947 5.919141 GCCCATTACGTACTCTAACACTATG 59.081 44.000 0.00 0.00 0.00 2.23
4556 7636 7.605410 GGTGATGAACCTCGTTTATTCTTTA 57.395 36.000 0.00 0.00 46.55 1.85
4615 7695 5.006746 GGCATAGACCTATGTTTTGAACTCG 59.993 44.000 15.90 0.00 43.57 4.18
4648 7728 4.352893 CCCCCAAAATAACTCATCTTGGT 58.647 43.478 0.00 0.00 35.73 3.67
4705 7785 3.500448 TGTAGTTGCATTCCTTGTGGA 57.500 42.857 0.00 0.00 41.36 4.02
4714 7794 3.375299 GCATTCCTTGTGGACATGTCTAC 59.625 47.826 29.57 29.57 43.06 2.59
4774 7854 2.561478 AGAAAAGTGCCACGGTATGT 57.439 45.000 0.00 0.00 0.00 2.29
5111 8201 5.003804 GCTACTTCCTTTTCAGAATCCACA 58.996 41.667 0.00 0.00 0.00 4.17
5161 8252 8.970859 AGGATTTATATGAACACTCTTTCCTG 57.029 34.615 0.00 0.00 0.00 3.86
5438 8529 6.314917 ACAAAAAGGGTAACTCAGATGGAAT 58.685 36.000 0.00 0.00 0.00 3.01
5502 8593 2.270986 CCCTGCCTGGTTCAGCAAC 61.271 63.158 0.00 0.00 0.00 4.17
5526 8617 7.454225 ACTGCCTGATTACTCTCTTTTTAGTT 58.546 34.615 0.00 0.00 0.00 2.24
5550 8641 1.985447 CTGTAGCTTGTGCATGCCCG 61.985 60.000 16.68 1.62 42.74 6.13
5551 8642 1.745115 GTAGCTTGTGCATGCCCGA 60.745 57.895 16.68 1.77 42.74 5.14
5590 8681 8.045507 ACTTCTGCTATTGAATTCATCTCTTCA 58.954 33.333 9.40 2.75 0.00 3.02
5678 8769 7.775053 ATATGTTAATGTTCTGTTGTTGGGT 57.225 32.000 0.00 0.00 0.00 4.51
6060 9287 4.617298 GCTAGTTTCTGACTGACCTCTCAC 60.617 50.000 0.00 0.00 39.48 3.51
6061 9288 3.300388 AGTTTCTGACTGACCTCTCACA 58.700 45.455 0.00 0.00 37.17 3.58
6095 9322 7.817418 ATAAACCTTTTTGTTCAGTAGAGCA 57.183 32.000 0.00 0.00 32.81 4.26
6168 9395 8.352752 TGTATCAGCAACGTCTAATAAATGAG 57.647 34.615 0.00 0.00 0.00 2.90
6250 9477 8.814038 ACAATAGAGGATGCTAATGTTCTTTT 57.186 30.769 0.00 0.00 32.11 2.27
6287 9514 4.701651 AGAAAATGGCAGAACAATCATCGA 59.298 37.500 0.00 0.00 0.00 3.59
6370 9597 3.569194 TGCAAGTTTGTTCTCCAGGTA 57.431 42.857 0.00 0.00 0.00 3.08
6398 9625 4.836125 ATTTCGAGTGTTGCTTGATTGT 57.164 36.364 0.00 0.00 37.45 2.71
6516 9749 6.686484 TCTATCATGTACATGCCTTGGTAT 57.314 37.500 27.71 17.24 38.65 2.73
6589 9822 7.209475 TGATCCAATTTGTTTTTCTGTTCCTC 58.791 34.615 0.00 0.00 0.00 3.71
6657 9890 5.519722 CACCATGTTCTGAAGTTGTTTACC 58.480 41.667 0.00 0.00 0.00 2.85
6849 10404 4.717233 TGCTTCTTGACACACATTTTGT 57.283 36.364 0.00 0.00 39.97 2.83
6924 10479 4.040339 TGCATGTTCTCTAGACAGGAAACA 59.960 41.667 0.00 1.89 33.81 2.83
7242 10798 3.161866 GACTAAACCAATGCTCCCCAAA 58.838 45.455 0.00 0.00 0.00 3.28
7353 10945 1.480498 GGGTTTCCAGAAGGCTTTCCA 60.480 52.381 4.73 0.00 33.64 3.53
7356 10948 3.056536 GGTTTCCAGAAGGCTTTCCATTC 60.057 47.826 4.73 0.00 33.64 2.67
7430 11035 7.919091 AGCAGCATACATGTTTCAAAATATCAG 59.081 33.333 2.30 0.00 0.00 2.90
7448 11053 8.915057 AATATCAGAAGATTTACATCCTGTGG 57.085 34.615 0.00 0.00 35.67 4.17
7472 11077 5.149273 CACTTGTAACTGACAATGATGCAC 58.851 41.667 0.00 0.00 46.95 4.57
7480 11085 5.466819 ACTGACAATGATGCACAGAAATTG 58.533 37.500 5.35 6.26 37.55 2.32
7637 11242 0.325577 GGGATCAAACTGGCCCCAAT 60.326 55.000 0.00 0.00 37.04 3.16
7700 11305 8.567285 TCTTATGATTCCTTCTGAACCTTTTC 57.433 34.615 0.00 0.00 35.31 2.29
7917 11522 2.295349 GCATTTGGGATGTAGATGGCAG 59.705 50.000 0.00 0.00 0.00 4.85
7940 11547 4.095036 GTGAAAATAGGTACTTGCCAGCTC 59.905 45.833 0.00 0.00 41.75 4.09
7986 11593 3.895998 TGCCTATGGTATGTGCAAATGA 58.104 40.909 0.00 0.00 0.00 2.57
8178 11785 1.546029 CACAATCACCGACTCTCTCCA 59.454 52.381 0.00 0.00 0.00 3.86
8186 11793 0.814457 CGACTCTCTCCAGTTCTGGG 59.186 60.000 17.37 9.33 0.00 4.45
8295 11902 1.471676 GGATGTCGAAGTCCGCAATCT 60.472 52.381 1.95 0.00 38.37 2.40
8333 11940 0.605589 ACCAACGCCTCTTTGCCTAC 60.606 55.000 0.00 0.00 0.00 3.18
8388 11995 3.314388 CTGCCTTCGTTTCAGCCGC 62.314 63.158 0.00 0.00 0.00 6.53
8465 12072 1.328430 CCACCGGGGAGAAGTACCTC 61.328 65.000 4.41 0.00 40.01 3.85
8574 12184 5.128468 CGTTGTAACGCTTCACTAGTTTTC 58.872 41.667 4.08 0.00 46.06 2.29
8619 12229 7.771826 GTCTTCCTCTGTACAGTATTCTCTAGT 59.228 40.741 21.99 0.00 0.00 2.57
8620 12230 8.990203 TCTTCCTCTGTACAGTATTCTCTAGTA 58.010 37.037 21.99 0.00 0.00 1.82
8621 12231 9.268268 CTTCCTCTGTACAGTATTCTCTAGTAG 57.732 40.741 21.99 7.66 0.00 2.57
8623 12233 8.423349 TCCTCTGTACAGTATTCTCTAGTAGAC 58.577 40.741 21.99 0.00 32.51 2.59
8624 12234 8.426489 CCTCTGTACAGTATTCTCTAGTAGACT 58.574 40.741 21.99 0.00 32.51 3.24
8625 12235 9.256477 CTCTGTACAGTATTCTCTAGTAGACTG 57.744 40.741 21.99 12.22 33.89 3.51
8637 12247 7.793036 TCTCTAGTAGACTGCACATCTTAGTA 58.207 38.462 0.00 0.00 0.00 1.82
8650 12260 6.347402 GCACATCTTAGTACACAAATCAACGT 60.347 38.462 0.00 0.00 0.00 3.99
8651 12261 7.148705 GCACATCTTAGTACACAAATCAACGTA 60.149 37.037 0.00 0.00 0.00 3.57
8652 12262 8.160342 CACATCTTAGTACACAAATCAACGTAC 58.840 37.037 0.00 0.00 35.53 3.67
8653 12263 8.086522 ACATCTTAGTACACAAATCAACGTACT 58.913 33.333 0.00 0.00 44.93 2.73
8654 12264 8.584600 CATCTTAGTACACAAATCAACGTACTC 58.415 37.037 4.46 0.00 42.61 2.59
8655 12265 7.086376 TCTTAGTACACAAATCAACGTACTCC 58.914 38.462 4.46 0.00 42.61 3.85
8656 12266 5.464030 AGTACACAAATCAACGTACTCCT 57.536 39.130 0.00 0.00 40.29 3.69
8657 12267 5.467705 AGTACACAAATCAACGTACTCCTC 58.532 41.667 0.00 0.00 40.29 3.71
8658 12268 4.330944 ACACAAATCAACGTACTCCTCA 57.669 40.909 0.00 0.00 0.00 3.86
8659 12269 4.307432 ACACAAATCAACGTACTCCTCAG 58.693 43.478 0.00 0.00 0.00 3.35
8660 12270 3.123621 CACAAATCAACGTACTCCTCAGC 59.876 47.826 0.00 0.00 0.00 4.26
8661 12271 3.244078 ACAAATCAACGTACTCCTCAGCA 60.244 43.478 0.00 0.00 0.00 4.41
8662 12272 2.949451 ATCAACGTACTCCTCAGCAG 57.051 50.000 0.00 0.00 0.00 4.24
8663 12273 1.905637 TCAACGTACTCCTCAGCAGA 58.094 50.000 0.00 0.00 0.00 4.26
8664 12274 1.540267 TCAACGTACTCCTCAGCAGAC 59.460 52.381 0.00 0.00 0.00 3.51
8665 12275 1.269723 CAACGTACTCCTCAGCAGACA 59.730 52.381 0.00 0.00 0.00 3.41
8666 12276 1.840737 ACGTACTCCTCAGCAGACAT 58.159 50.000 0.00 0.00 0.00 3.06
8667 12277 1.474478 ACGTACTCCTCAGCAGACATG 59.526 52.381 0.00 0.00 0.00 3.21
8668 12278 1.474478 CGTACTCCTCAGCAGACATGT 59.526 52.381 0.00 0.00 0.00 3.21
8669 12279 2.683362 CGTACTCCTCAGCAGACATGTA 59.317 50.000 0.00 0.00 0.00 2.29
8670 12280 3.316588 CGTACTCCTCAGCAGACATGTAT 59.683 47.826 0.00 0.00 0.00 2.29
8671 12281 3.815856 ACTCCTCAGCAGACATGTATG 57.184 47.619 16.15 16.15 0.00 2.39
8672 12282 3.369175 ACTCCTCAGCAGACATGTATGA 58.631 45.455 24.15 12.45 0.00 2.15
8673 12283 3.966006 ACTCCTCAGCAGACATGTATGAT 59.034 43.478 24.15 15.56 0.00 2.45
8674 12284 4.408270 ACTCCTCAGCAGACATGTATGATT 59.592 41.667 24.15 8.28 0.00 2.57
8675 12285 5.104610 ACTCCTCAGCAGACATGTATGATTT 60.105 40.000 24.15 5.76 0.00 2.17
8676 12286 5.121105 TCCTCAGCAGACATGTATGATTTG 58.879 41.667 24.15 16.74 0.00 2.32
8677 12287 4.261072 CCTCAGCAGACATGTATGATTTGC 60.261 45.833 24.15 14.00 34.62 3.68
8678 12288 4.520179 TCAGCAGACATGTATGATTTGCT 58.480 39.130 24.15 15.79 40.17 3.91
8679 12289 5.673514 TCAGCAGACATGTATGATTTGCTA 58.326 37.500 24.15 1.86 38.81 3.49
8680 12290 6.293698 TCAGCAGACATGTATGATTTGCTAT 58.706 36.000 24.15 0.00 38.81 2.97
8681 12291 6.204108 TCAGCAGACATGTATGATTTGCTATG 59.796 38.462 24.15 4.24 38.81 2.23
8682 12292 6.204108 CAGCAGACATGTATGATTTGCTATGA 59.796 38.462 24.15 0.00 38.81 2.15
8683 12293 6.940867 AGCAGACATGTATGATTTGCTATGAT 59.059 34.615 24.15 0.00 38.94 2.45
8724 12334 8.284945 ACATTGACATGTATGATTTGCTAGTT 57.715 30.769 14.22 0.00 42.24 2.24
8769 12379 1.610522 GGGATGATGCCTTGTATGCAC 59.389 52.381 0.00 0.00 42.38 4.57
8793 12403 6.205853 ACATTACGCTGACATTTTTCCAACTA 59.794 34.615 0.00 0.00 0.00 2.24
8819 12429 9.566432 ACTTTTCATCATAATCAATACTCCCTC 57.434 33.333 0.00 0.00 0.00 4.30
8821 12431 6.286240 TCATCATAATCAATACTCCCTCCG 57.714 41.667 0.00 0.00 0.00 4.63
8822 12432 5.780282 TCATCATAATCAATACTCCCTCCGT 59.220 40.000 0.00 0.00 0.00 4.69
8823 12433 6.951778 TCATCATAATCAATACTCCCTCCGTA 59.048 38.462 0.00 0.00 0.00 4.02
8825 12435 7.606135 TCATAATCAATACTCCCTCCGTAAA 57.394 36.000 0.00 0.00 0.00 2.01
8826 12436 7.667557 TCATAATCAATACTCCCTCCGTAAAG 58.332 38.462 0.00 0.00 0.00 1.85
8827 12437 7.507956 TCATAATCAATACTCCCTCCGTAAAGA 59.492 37.037 0.00 0.00 0.00 2.52
8828 12438 6.555463 AATCAATACTCCCTCCGTAAAGAA 57.445 37.500 0.00 0.00 0.00 2.52
8830 12440 6.555463 TCAATACTCCCTCCGTAAAGAAAT 57.445 37.500 0.00 0.00 0.00 2.17
8831 12441 7.664552 TCAATACTCCCTCCGTAAAGAAATA 57.335 36.000 0.00 0.00 0.00 1.40
8833 12443 8.542080 TCAATACTCCCTCCGTAAAGAAATAAA 58.458 33.333 0.00 0.00 0.00 1.40
8835 12445 8.959705 ATACTCCCTCCGTAAAGAAATAAAAG 57.040 34.615 0.00 0.00 0.00 2.27
8836 12446 7.012661 ACTCCCTCCGTAAAGAAATAAAAGA 57.987 36.000 0.00 0.00 0.00 2.52
8837 12447 7.104290 ACTCCCTCCGTAAAGAAATAAAAGAG 58.896 38.462 0.00 0.00 0.00 2.85
8838 12448 5.878669 TCCCTCCGTAAAGAAATAAAAGAGC 59.121 40.000 0.00 0.00 0.00 4.09
8839 12449 5.220605 CCCTCCGTAAAGAAATAAAAGAGCG 60.221 44.000 0.00 0.00 0.00 5.03
8841 12451 6.128363 CCTCCGTAAAGAAATAAAAGAGCGTT 60.128 38.462 0.00 0.00 0.00 4.84
8842 12452 6.824557 TCCGTAAAGAAATAAAAGAGCGTTC 58.175 36.000 0.00 0.00 0.00 3.95
8844 12454 6.736853 CCGTAAAGAAATAAAAGAGCGTTCAG 59.263 38.462 1.01 0.00 0.00 3.02
8845 12455 7.359765 CCGTAAAGAAATAAAAGAGCGTTCAGA 60.360 37.037 1.01 0.00 0.00 3.27
8847 12457 9.479278 GTAAAGAAATAAAAGAGCGTTCAGATC 57.521 33.333 1.01 0.00 35.01 2.75
8848 12458 7.672983 AAGAAATAAAAGAGCGTTCAGATCA 57.327 32.000 1.01 0.00 37.82 2.92
8850 12460 6.876257 AGAAATAAAAGAGCGTTCAGATCACT 59.124 34.615 1.01 0.00 37.82 3.41
8851 12461 8.035394 AGAAATAAAAGAGCGTTCAGATCACTA 58.965 33.333 1.01 0.00 37.82 2.74
8852 12462 7.527084 AATAAAAGAGCGTTCAGATCACTAC 57.473 36.000 1.01 0.00 37.82 2.73
8853 12463 4.792521 AAAGAGCGTTCAGATCACTACT 57.207 40.909 1.01 0.00 37.82 2.57
8854 12464 4.792521 AAGAGCGTTCAGATCACTACTT 57.207 40.909 1.01 0.00 37.82 2.24
8855 12465 4.792521 AGAGCGTTCAGATCACTACTTT 57.207 40.909 1.01 0.00 37.82 2.66
8856 12466 5.899120 AGAGCGTTCAGATCACTACTTTA 57.101 39.130 1.01 0.00 37.82 1.85
8857 12467 5.885881 AGAGCGTTCAGATCACTACTTTAG 58.114 41.667 1.01 0.00 37.82 1.85
8858 12468 5.416326 AGAGCGTTCAGATCACTACTTTAGT 59.584 40.000 1.01 0.00 37.82 2.24
8904 12514 9.496710 TTCTTTATAGAGGGAGTACCAATTACA 57.503 33.333 0.00 0.00 43.89 2.41
8905 12515 8.921205 TCTTTATAGAGGGAGTACCAATTACAC 58.079 37.037 0.00 0.00 43.89 2.90
8906 12516 8.849543 TTTATAGAGGGAGTACCAATTACACT 57.150 34.615 0.00 0.00 43.89 3.55
8907 12517 6.732896 ATAGAGGGAGTACCAATTACACTG 57.267 41.667 0.00 0.00 43.89 3.66
8933 13938 5.826586 ACATCACAGTTAGAGATCATCGAC 58.173 41.667 0.00 0.00 0.00 4.20
8948 13953 2.544480 TCGACTGATACAGTTCGCAG 57.456 50.000 5.88 0.00 45.44 5.18
8970 13975 1.678627 ACTACAGAGCAGGACGCATAG 59.321 52.381 0.00 0.00 46.13 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.041265 AGGTGAAGATCCCCGCCT 59.959 61.111 10.34 10.34 38.38 5.52
11 12 2.190578 CAGGTGAAGATCCCCGCC 59.809 66.667 6.46 6.46 0.00 6.13
143 144 3.505386 GGATGAGGAGAGGAGCTATCAA 58.495 50.000 0.00 0.00 0.00 2.57
175 176 2.787473 TCGGGAGCTGATGATTGTTT 57.213 45.000 0.00 0.00 0.00 2.83
177 178 2.804572 CGATTCGGGAGCTGATGATTGT 60.805 50.000 0.00 0.00 0.00 2.71
181 182 1.742146 CCGATTCGGGAGCTGATGA 59.258 57.895 17.53 0.00 44.15 2.92
235 237 1.955778 TCGACGTCAGGTAAACAGGAA 59.044 47.619 17.16 0.00 0.00 3.36
243 245 0.384309 GCCATCATCGACGTCAGGTA 59.616 55.000 17.16 0.00 0.00 3.08
293 295 4.764336 TACGTGTCGGCGGCGAAG 62.764 66.667 36.31 28.87 35.98 3.79
344 346 4.369872 AGACAGAGGGAGGAAGATTTGAT 58.630 43.478 0.00 0.00 0.00 2.57
365 367 3.053455 GGATCTCAATCCGAAAGCGTAG 58.947 50.000 0.00 0.00 42.16 3.51
413 418 5.619625 ATTTCCTGAAGAGAAAGAAAGCG 57.380 39.130 0.00 0.00 36.71 4.68
414 419 6.082984 CGAATTTCCTGAAGAGAAAGAAAGC 58.917 40.000 0.00 0.00 36.71 3.51
415 420 6.082984 GCGAATTTCCTGAAGAGAAAGAAAG 58.917 40.000 0.00 0.00 36.71 2.62
416 421 5.530915 TGCGAATTTCCTGAAGAGAAAGAAA 59.469 36.000 0.00 0.00 36.71 2.52
417 422 5.049405 GTGCGAATTTCCTGAAGAGAAAGAA 60.049 40.000 0.00 0.00 36.71 2.52
418 423 4.452455 GTGCGAATTTCCTGAAGAGAAAGA 59.548 41.667 0.00 0.00 36.71 2.52
419 424 4.453819 AGTGCGAATTTCCTGAAGAGAAAG 59.546 41.667 0.00 0.00 36.71 2.62
430 435 6.791303 TGGATACATTAAAGTGCGAATTTCC 58.209 36.000 0.00 0.00 46.17 3.13
480 495 3.350219 TTCATTTGAGACCCTACAGCC 57.650 47.619 0.00 0.00 0.00 4.85
550 568 9.454859 CATCCTTTAGACCTTGTTTCTAAGATT 57.545 33.333 0.00 0.00 36.99 2.40
551 569 8.826765 TCATCCTTTAGACCTTGTTTCTAAGAT 58.173 33.333 0.00 0.00 36.99 2.40
554 572 9.635404 TTTTCATCCTTTAGACCTTGTTTCTAA 57.365 29.630 0.00 0.00 34.43 2.10
582 600 8.758829 AGGTCTGAAAGTTTCCTGTAAAATTTT 58.241 29.630 13.01 8.75 43.36 1.82
586 604 8.810990 TTAAGGTCTGAAAGTTTCCTGTAAAA 57.189 30.769 13.01 0.00 33.05 1.52
597 615 9.495572 CTCAGTTTATTCTTAAGGTCTGAAAGT 57.504 33.333 1.85 0.00 33.76 2.66
609 627 4.501071 GGGCGTGTCTCAGTTTATTCTTA 58.499 43.478 0.00 0.00 0.00 2.10
680 699 1.339097 ATGGTAGAGGGGTATGCGTC 58.661 55.000 0.00 0.00 0.00 5.19
685 704 6.071728 CGTCGTAATTTATGGTAGAGGGGTAT 60.072 42.308 0.00 0.00 0.00 2.73
699 719 4.218200 TGGGAGAGTGAACGTCGTAATTTA 59.782 41.667 0.00 0.00 0.00 1.40
725 745 0.035458 GTTGGCCTATCATCTCCCCG 59.965 60.000 3.32 0.00 0.00 5.73
767 787 1.819632 CGTGGCCTAGGTCAATGGC 60.820 63.158 19.95 4.43 45.42 4.40
799 819 1.990060 CTGGATGGGGTCGACAGGT 60.990 63.158 18.91 0.00 0.00 4.00
802 822 0.252330 TTACCTGGATGGGGTCGACA 60.252 55.000 18.91 0.00 41.11 4.35
812 832 6.290294 ACGTTGTAACATACTTACCTGGAT 57.710 37.500 0.00 0.00 0.00 3.41
836 856 1.264749 ATAAGGAGCGGCACCTGTCA 61.265 55.000 19.80 8.70 37.85 3.58
838 858 1.221840 CATAAGGAGCGGCACCTGT 59.778 57.895 19.80 11.95 37.85 4.00
841 861 0.880718 GCTACATAAGGAGCGGCACC 60.881 60.000 8.52 8.52 0.00 5.01
978 998 2.983879 CGGGCCTGGGGAAACATCT 61.984 63.158 2.57 0.00 0.00 2.90
1266 1288 3.570621 TAACGCACTAACCGCCGCA 62.571 57.895 0.00 0.00 0.00 5.69
1268 1290 2.447070 GGTAACGCACTAACCGCCG 61.447 63.158 0.00 0.00 0.00 6.46
1317 1348 1.075970 CTCCTCCCCATCGTCCTCA 60.076 63.158 0.00 0.00 0.00 3.86
1499 1530 7.704472 CAGTACCAAGCAATCTAGAACTAGAAG 59.296 40.741 14.25 11.28 44.44 2.85
1502 1533 5.751028 GCAGTACCAAGCAATCTAGAACTAG 59.249 44.000 0.00 2.77 34.56 2.57
1503 1534 5.422331 AGCAGTACCAAGCAATCTAGAACTA 59.578 40.000 0.00 0.00 0.00 2.24
1504 1535 4.223923 AGCAGTACCAAGCAATCTAGAACT 59.776 41.667 0.00 0.00 0.00 3.01
1505 1536 4.331168 CAGCAGTACCAAGCAATCTAGAAC 59.669 45.833 0.00 0.00 0.00 3.01
1506 1537 4.507710 CAGCAGTACCAAGCAATCTAGAA 58.492 43.478 0.00 0.00 0.00 2.10
1507 1538 3.679917 GCAGCAGTACCAAGCAATCTAGA 60.680 47.826 0.00 0.00 0.00 2.43
1575 1606 2.351350 GGGAAACACAGCACAATTACCG 60.351 50.000 0.00 0.00 0.00 4.02
1628 1659 0.253347 ACCTCCAGTCCATCCACCAT 60.253 55.000 0.00 0.00 0.00 3.55
1630 1661 0.253327 GAACCTCCAGTCCATCCACC 59.747 60.000 0.00 0.00 0.00 4.61
1675 1706 1.064060 GAGTCAAATATGTGCCACCGC 59.936 52.381 0.00 0.00 0.00 5.68
1677 1708 5.506317 GCTTATGAGTCAAATATGTGCCACC 60.506 44.000 0.00 0.00 0.00 4.61
1921 1952 5.220777 GCTACTCAACAAGCAAAACACAGTA 60.221 40.000 0.00 0.00 38.63 2.74
1937 1968 6.701145 AGATTATCTTCGTCTGCTACTCAA 57.299 37.500 0.00 0.00 0.00 3.02
1982 2013 6.499350 AGAACTTAGGTGACCCACTTACAATA 59.501 38.462 0.00 0.00 34.40 1.90
2045 2076 4.450082 AATTTGACGGCCCATTTTAGAC 57.550 40.909 0.00 0.00 0.00 2.59
2059 2090 4.286910 TCTGCGTTGTTAGCAAATTTGAC 58.713 39.130 22.31 11.47 44.67 3.18
2062 2093 5.231991 CAGTTTCTGCGTTGTTAGCAAATTT 59.768 36.000 0.00 0.00 44.67 1.82
2341 2373 5.652891 CAGGTGGAGTGTAGTGTTAGAGTAT 59.347 44.000 0.00 0.00 0.00 2.12
2418 2450 4.000988 AGGTGTTAGGTTTATCTTGCGTG 58.999 43.478 0.00 0.00 0.00 5.34
2686 2744 0.326264 GGAGAAGGCATGGTGTCACT 59.674 55.000 2.35 0.00 0.00 3.41
2716 2774 0.030638 GTGCGGTGCAAATCAACAGT 59.969 50.000 0.00 0.00 41.47 3.55
2723 2781 1.526575 CTTCCCTGTGCGGTGCAAAT 61.527 55.000 0.00 0.00 41.47 2.32
2794 2857 1.402852 CCTCAAAGTCTGCGACATCGA 60.403 52.381 5.26 0.00 43.02 3.59
2851 2914 1.686800 GGCATGCAGTTTCCCCCAT 60.687 57.895 21.36 0.00 0.00 4.00
2862 2925 2.279743 GGGGATCTTGGGCATGCA 59.720 61.111 21.36 0.00 0.00 3.96
2883 2946 1.372748 CCTCGATCTCATCCGCTGC 60.373 63.158 0.00 0.00 0.00 5.25
2934 2997 2.046988 CGTGGTCTGCAGATGCCA 60.047 61.111 21.47 20.29 41.18 4.92
2935 2998 3.503363 GCGTGGTCTGCAGATGCC 61.503 66.667 21.47 17.74 41.18 4.40
2936 2999 2.044832 GATGCGTGGTCTGCAGATGC 62.045 60.000 21.47 20.46 46.98 3.91
2937 3000 0.461516 AGATGCGTGGTCTGCAGATG 60.462 55.000 21.47 11.41 46.98 2.90
2938 3001 0.179089 GAGATGCGTGGTCTGCAGAT 60.179 55.000 21.47 0.62 46.98 2.90
2939 3002 1.216444 GAGATGCGTGGTCTGCAGA 59.784 57.895 13.74 13.74 46.98 4.26
2940 3003 1.812922 GGAGATGCGTGGTCTGCAG 60.813 63.158 7.63 7.63 46.98 4.41
2942 3005 2.512515 GGGAGATGCGTGGTCTGC 60.513 66.667 0.00 0.00 33.79 4.26
2943 3006 2.202797 CGGGAGATGCGTGGTCTG 60.203 66.667 0.00 0.00 0.00 3.51
2944 3007 4.148825 GCGGGAGATGCGTGGTCT 62.149 66.667 0.00 0.00 0.00 3.85
2945 3008 4.451150 TGCGGGAGATGCGTGGTC 62.451 66.667 0.00 0.00 34.24 4.02
2946 3009 4.760047 GTGCGGGAGATGCGTGGT 62.760 66.667 0.00 0.00 34.24 4.16
2947 3010 4.758251 TGTGCGGGAGATGCGTGG 62.758 66.667 0.00 0.00 34.24 4.94
2948 3011 2.512286 ATGTGCGGGAGATGCGTG 60.512 61.111 0.00 0.00 34.24 5.34
2949 3012 2.512286 CATGTGCGGGAGATGCGT 60.512 61.111 0.00 0.00 34.24 5.24
2950 3013 3.945434 GCATGTGCGGGAGATGCG 61.945 66.667 15.31 0.00 33.67 4.73
2951 3014 3.589881 GGCATGTGCGGGAGATGC 61.590 66.667 20.86 20.86 43.26 3.91
2952 3015 3.274586 CGGCATGTGCGGGAGATG 61.275 66.667 2.14 2.14 43.26 2.90
2953 3016 3.469970 TCGGCATGTGCGGGAGAT 61.470 61.111 11.82 0.00 43.26 2.75
2954 3017 4.451150 GTCGGCATGTGCGGGAGA 62.451 66.667 11.82 0.93 43.26 3.71
2955 3018 4.758251 TGTCGGCATGTGCGGGAG 62.758 66.667 11.82 0.00 43.26 4.30
2958 3021 4.088762 GTGTGTCGGCATGTGCGG 62.089 66.667 0.00 6.24 43.26 5.69
2959 3022 1.686566 CTAGTGTGTCGGCATGTGCG 61.687 60.000 0.00 0.00 43.26 5.34
2960 3023 1.361668 CCTAGTGTGTCGGCATGTGC 61.362 60.000 0.00 0.00 41.14 4.57
2961 3024 0.246360 TCCTAGTGTGTCGGCATGTG 59.754 55.000 0.00 0.00 0.00 3.21
2962 3025 0.532573 CTCCTAGTGTGTCGGCATGT 59.467 55.000 0.00 0.00 0.00 3.21
2963 3026 0.179100 CCTCCTAGTGTGTCGGCATG 60.179 60.000 0.00 0.00 0.00 4.06
2964 3027 1.961180 GCCTCCTAGTGTGTCGGCAT 61.961 60.000 0.00 0.00 37.48 4.40
2965 3028 2.646175 GCCTCCTAGTGTGTCGGCA 61.646 63.158 0.00 0.00 37.48 5.69
2966 3029 2.184579 GCCTCCTAGTGTGTCGGC 59.815 66.667 0.00 0.00 0.00 5.54
2967 3030 2.893398 GGCCTCCTAGTGTGTCGG 59.107 66.667 0.00 0.00 0.00 4.79
2968 3031 2.490217 CGGCCTCCTAGTGTGTCG 59.510 66.667 0.00 0.00 0.00 4.35
2969 3032 2.184579 GCGGCCTCCTAGTGTGTC 59.815 66.667 0.00 0.00 0.00 3.67
2970 3033 3.760035 CGCGGCCTCCTAGTGTGT 61.760 66.667 0.00 0.00 0.00 3.72
2995 3058 3.368571 GGTTGTGAGGCTGCAGGC 61.369 66.667 31.58 31.58 41.43 4.85
2996 3059 3.052082 CGGTTGTGAGGCTGCAGG 61.052 66.667 17.12 0.00 0.00 4.85
2997 3060 3.730761 GCGGTTGTGAGGCTGCAG 61.731 66.667 10.11 10.11 37.00 4.41
3000 3063 4.680237 TCGGCGGTTGTGAGGCTG 62.680 66.667 7.21 0.00 0.00 4.85
3001 3064 4.681978 GTCGGCGGTTGTGAGGCT 62.682 66.667 7.21 0.00 0.00 4.58
3002 3065 4.980805 TGTCGGCGGTTGTGAGGC 62.981 66.667 7.21 0.00 0.00 4.70
3003 3066 3.041940 GTGTCGGCGGTTGTGAGG 61.042 66.667 7.21 0.00 0.00 3.86
3004 3067 3.403057 CGTGTCGGCGGTTGTGAG 61.403 66.667 7.21 0.00 0.00 3.51
3005 3068 4.210093 ACGTGTCGGCGGTTGTGA 62.210 61.111 7.21 0.00 35.98 3.58
3006 3069 3.995669 CACGTGTCGGCGGTTGTG 61.996 66.667 7.58 7.56 35.98 3.33
3014 3077 4.789075 CTACCCGCCACGTGTCGG 62.789 72.222 29.85 29.85 44.89 4.79
3018 3081 4.508128 ATCGCTACCCGCCACGTG 62.508 66.667 9.08 9.08 36.73 4.49
3019 3082 4.203076 GATCGCTACCCGCCACGT 62.203 66.667 0.00 0.00 36.73 4.49
3020 3083 4.944372 GGATCGCTACCCGCCACG 62.944 72.222 0.00 0.00 36.73 4.94
3021 3084 3.379865 TTGGATCGCTACCCGCCAC 62.380 63.158 0.00 0.00 36.73 5.01
3022 3085 3.078196 TTGGATCGCTACCCGCCA 61.078 61.111 0.00 0.00 36.73 5.69
3023 3086 2.280186 CTTGGATCGCTACCCGCC 60.280 66.667 0.00 0.00 36.73 6.13
3024 3087 2.280186 CCTTGGATCGCTACCCGC 60.280 66.667 0.00 0.00 36.73 6.13
3025 3088 2.280186 GCCTTGGATCGCTACCCG 60.280 66.667 0.00 0.00 38.61 5.28
3026 3089 2.280186 CGCCTTGGATCGCTACCC 60.280 66.667 0.00 0.00 0.00 3.69
3027 3090 2.280186 CCGCCTTGGATCGCTACC 60.280 66.667 0.00 0.00 42.00 3.18
3028 3091 2.812499 TCCGCCTTGGATCGCTAC 59.188 61.111 0.00 0.00 43.74 3.58
3036 3099 2.032528 TCACTGCTTCCGCCTTGG 59.967 61.111 0.00 0.00 40.09 3.61
3037 3100 2.671177 CGTCACTGCTTCCGCCTTG 61.671 63.158 0.00 0.00 34.43 3.61
3038 3101 2.357517 CGTCACTGCTTCCGCCTT 60.358 61.111 0.00 0.00 34.43 4.35
3039 3102 3.303135 TCGTCACTGCTTCCGCCT 61.303 61.111 0.00 0.00 34.43 5.52
3040 3103 3.112709 GTCGTCACTGCTTCCGCC 61.113 66.667 0.00 0.00 34.43 6.13
3041 3104 3.470567 CGTCGTCACTGCTTCCGC 61.471 66.667 0.00 0.00 0.00 5.54
3042 3105 1.797933 CTCGTCGTCACTGCTTCCG 60.798 63.158 0.00 0.00 0.00 4.30
3043 3106 1.444553 CCTCGTCGTCACTGCTTCC 60.445 63.158 0.00 0.00 0.00 3.46
3044 3107 1.444553 CCCTCGTCGTCACTGCTTC 60.445 63.158 0.00 0.00 0.00 3.86
3045 3108 2.651361 CCCTCGTCGTCACTGCTT 59.349 61.111 0.00 0.00 0.00 3.91
3046 3109 4.057428 GCCCTCGTCGTCACTGCT 62.057 66.667 0.00 0.00 0.00 4.24
3057 3120 4.436998 GTCCAGTCCACGCCCTCG 62.437 72.222 0.00 0.00 42.43 4.63
3058 3121 2.584391 AAGTCCAGTCCACGCCCTC 61.584 63.158 0.00 0.00 0.00 4.30
3059 3122 2.526873 AAGTCCAGTCCACGCCCT 60.527 61.111 0.00 0.00 0.00 5.19
3060 3123 2.358737 CAAGTCCAGTCCACGCCC 60.359 66.667 0.00 0.00 0.00 6.13
3061 3124 2.358737 CCAAGTCCAGTCCACGCC 60.359 66.667 0.00 0.00 0.00 5.68
3062 3125 1.961277 CACCAAGTCCAGTCCACGC 60.961 63.158 0.00 0.00 0.00 5.34
3063 3126 0.105964 TTCACCAAGTCCAGTCCACG 59.894 55.000 0.00 0.00 0.00 4.94
3064 3127 1.884235 CTTCACCAAGTCCAGTCCAC 58.116 55.000 0.00 0.00 0.00 4.02
3065 3128 0.108585 GCTTCACCAAGTCCAGTCCA 59.891 55.000 0.00 0.00 31.45 4.02
3066 3129 0.951040 CGCTTCACCAAGTCCAGTCC 60.951 60.000 0.00 0.00 31.45 3.85
3067 3130 0.951040 CCGCTTCACCAAGTCCAGTC 60.951 60.000 0.00 0.00 31.45 3.51
3068 3131 1.071471 CCGCTTCACCAAGTCCAGT 59.929 57.895 0.00 0.00 31.45 4.00
3069 3132 1.672356 CCCGCTTCACCAAGTCCAG 60.672 63.158 0.00 0.00 31.45 3.86
3070 3133 2.144078 TCCCGCTTCACCAAGTCCA 61.144 57.895 0.00 0.00 31.45 4.02
3071 3134 1.671379 GTCCCGCTTCACCAAGTCC 60.671 63.158 0.00 0.00 31.45 3.85
3072 3135 0.670854 GAGTCCCGCTTCACCAAGTC 60.671 60.000 0.00 0.00 31.45 3.01
3073 3136 1.371558 GAGTCCCGCTTCACCAAGT 59.628 57.895 0.00 0.00 31.45 3.16
3074 3137 1.376037 GGAGTCCCGCTTCACCAAG 60.376 63.158 0.00 0.00 0.00 3.61
3075 3138 1.841556 AGGAGTCCCGCTTCACCAA 60.842 57.895 5.25 0.00 37.58 3.67
3076 3139 2.203788 AGGAGTCCCGCTTCACCA 60.204 61.111 5.25 0.00 37.58 4.17
3077 3140 2.266055 CAGGAGTCCCGCTTCACC 59.734 66.667 5.25 0.00 37.58 4.02
3078 3141 2.435059 GCAGGAGTCCCGCTTCAC 60.435 66.667 10.32 0.00 37.58 3.18
3079 3142 3.706373 GGCAGGAGTCCCGCTTCA 61.706 66.667 16.93 0.00 37.58 3.02
3080 3143 4.821589 CGGCAGGAGTCCCGCTTC 62.822 72.222 16.93 0.59 37.85 3.86
3103 3166 4.899239 CTCTGGCCCCGCATCGAC 62.899 72.222 0.00 0.00 0.00 4.20
3223 3286 4.856801 ATCCATCGCCACCACCGC 62.857 66.667 0.00 0.00 0.00 5.68
3224 3287 2.896854 CATCCATCGCCACCACCG 60.897 66.667 0.00 0.00 0.00 4.94
3225 3288 2.516930 CCATCCATCGCCACCACC 60.517 66.667 0.00 0.00 0.00 4.61
3226 3289 3.211963 GCCATCCATCGCCACCAC 61.212 66.667 0.00 0.00 0.00 4.16
3227 3290 3.279504 TTGCCATCCATCGCCACCA 62.280 57.895 0.00 0.00 0.00 4.17
3228 3291 2.440065 TTGCCATCCATCGCCACC 60.440 61.111 0.00 0.00 0.00 4.61
3229 3292 1.750399 AGTTGCCATCCATCGCCAC 60.750 57.895 0.00 0.00 0.00 5.01
3230 3293 1.750018 CAGTTGCCATCCATCGCCA 60.750 57.895 0.00 0.00 0.00 5.69
3231 3294 3.113745 CAGTTGCCATCCATCGCC 58.886 61.111 0.00 0.00 0.00 5.54
3232 3295 2.332362 CTGCAGTTGCCATCCATCGC 62.332 60.000 5.25 0.00 41.18 4.58
3233 3296 1.725665 CTGCAGTTGCCATCCATCG 59.274 57.895 5.25 0.00 41.18 3.84
3234 3297 1.436336 GCTGCAGTTGCCATCCATC 59.564 57.895 16.64 0.00 41.18 3.51
3235 3298 2.412323 CGCTGCAGTTGCCATCCAT 61.412 57.895 16.64 0.00 41.18 3.41
3236 3299 3.057548 CGCTGCAGTTGCCATCCA 61.058 61.111 16.64 0.00 41.18 3.41
3237 3300 2.747460 TCGCTGCAGTTGCCATCC 60.747 61.111 16.64 0.00 41.18 3.51
3238 3301 2.482374 GTCGCTGCAGTTGCCATC 59.518 61.111 16.64 0.00 41.18 3.51
3239 3302 3.425713 CGTCGCTGCAGTTGCCAT 61.426 61.111 16.64 0.00 41.18 4.40
4027 6466 1.201424 GATCACCGGGGTCCTTAACT 58.799 55.000 2.12 0.00 0.00 2.24
4031 6470 1.689582 GGAGATCACCGGGGTCCTT 60.690 63.158 2.12 0.00 0.00 3.36
4114 6553 4.147449 CGCTGGTCGCATCCTCCA 62.147 66.667 0.00 0.00 39.08 3.86
4178 6659 3.677148 GCTCAGTTCCGATCATGTCTTCA 60.677 47.826 0.00 0.00 0.00 3.02
4437 6918 5.163519 TGTTAGAGTACGTAATGGGCCTAAC 60.164 44.000 18.13 18.13 36.77 2.34
4465 6946 4.811969 AATCAAAAGGCTCAATGATGCA 57.188 36.364 9.51 0.00 33.06 3.96
4466 6947 7.493320 TCAAATAATCAAAAGGCTCAATGATGC 59.507 33.333 9.51 0.00 33.06 3.91
4519 7000 4.546674 GTTCATCACCCCCTGGATATTTT 58.453 43.478 0.00 0.00 34.81 1.82
4520 7001 3.117131 GGTTCATCACCCCCTGGATATTT 60.117 47.826 0.00 0.00 40.19 1.40
4521 7002 2.447047 GGTTCATCACCCCCTGGATATT 59.553 50.000 0.00 0.00 40.19 1.28
4522 7003 2.065799 GGTTCATCACCCCCTGGATAT 58.934 52.381 0.00 0.00 40.19 1.63
4523 7004 1.518367 GGTTCATCACCCCCTGGATA 58.482 55.000 0.00 0.00 40.19 2.59
4534 7288 8.508875 GGTTTAAAGAATAAACGAGGTTCATCA 58.491 33.333 0.00 0.00 38.06 3.07
4615 7695 7.093684 TGAGTTATTTTGGGGGCTACAAATAAC 60.094 37.037 14.40 14.40 37.62 1.89
4705 7785 2.739932 GCAAGATCTGCCGTAGACATGT 60.740 50.000 0.00 0.00 46.13 3.21
4774 7854 8.208224 TGATTCTAAACTAGGAGTTGTTGACAA 58.792 33.333 0.00 0.00 38.66 3.18
4984 8074 8.556589 TGGTCAGAAATATATCCAAGGAAAAGA 58.443 33.333 0.00 0.00 0.00 2.52
5140 8231 8.999431 GTCAACAGGAAAGAGTGTTCATATAAA 58.001 33.333 0.00 0.00 34.62 1.40
5142 8233 7.676004 TGTCAACAGGAAAGAGTGTTCATATA 58.324 34.615 0.00 0.00 34.62 0.86
5143 8234 6.533730 TGTCAACAGGAAAGAGTGTTCATAT 58.466 36.000 0.00 0.00 34.62 1.78
5160 8251 6.765512 TCTTACATTCAGTGAACATGTCAACA 59.234 34.615 13.97 0.00 38.23 3.33
5161 8252 7.189693 TCTTACATTCAGTGAACATGTCAAC 57.810 36.000 13.97 0.19 38.23 3.18
5252 8343 5.005740 CACCAGGATTTCTTGATTCACAGA 58.994 41.667 0.00 0.00 0.00 3.41
5348 8439 8.925161 TGCTAATAGTTTGTTATCCATTTTGC 57.075 30.769 0.00 0.00 0.00 3.68
5438 8529 4.570772 GCAAACGCCTATGATTTACTCAGA 59.429 41.667 0.00 0.00 37.28 3.27
5502 8593 7.604164 TCAACTAAAAAGAGAGTAATCAGGCAG 59.396 37.037 0.00 0.00 0.00 4.85
5526 8617 2.421073 GCATGCACAAGCTACAGAATCA 59.579 45.455 14.21 0.00 42.74 2.57
5550 8641 5.368256 AGCAGAAGTGAACATTCAACATC 57.632 39.130 0.00 0.00 39.21 3.06
5551 8642 7.175467 TCAATAGCAGAAGTGAACATTCAACAT 59.825 33.333 0.00 0.00 39.21 2.71
5590 8681 6.015180 ACATTTACACTGAACTGAAATGGCAT 60.015 34.615 0.00 0.00 40.29 4.40
5678 8769 6.439636 AGAGAATATGCCAGTTGCCTATAA 57.560 37.500 0.00 0.00 40.16 0.98
6060 9287 8.661352 AACAAAAAGGTTTATTTCCTGACATG 57.339 30.769 0.00 0.00 35.27 3.21
6061 9288 8.482128 TGAACAAAAAGGTTTATTTCCTGACAT 58.518 29.630 0.00 0.00 35.27 3.06
6168 9395 0.514691 CCTGTCGCTTTGAGCTTGAC 59.485 55.000 0.00 0.48 39.60 3.18
6250 9477 7.002250 TGCCATTTTCTTCATAATTGGTTGA 57.998 32.000 0.00 0.00 31.70 3.18
6428 9660 5.527582 GGCACTAGAAAACAACTCTCAAGAA 59.472 40.000 0.00 0.00 0.00 2.52
6497 9730 5.125356 CAAGATACCAAGGCATGTACATGA 58.875 41.667 34.65 15.54 41.20 3.07
6516 9749 4.431809 CAAAGTTGGCATGACAAACAAGA 58.568 39.130 17.49 0.00 31.17 3.02
6627 9860 3.181445 ACTTCAGAACATGGTGCCTTACA 60.181 43.478 0.00 0.00 0.00 2.41
6657 9890 8.393366 CAGGACAAACTCATTCTACAACATATG 58.607 37.037 0.00 0.00 0.00 1.78
6849 10404 8.836268 ACATAAGGTGACTACGAATAAACAAA 57.164 30.769 0.00 0.00 42.68 2.83
6893 10448 5.186603 TGTCTAGAGAACATGCAGATCTGTT 59.813 40.000 23.38 10.94 38.26 3.16
7116 10672 3.888323 ACATTGTTGGTTGTCATGCTGTA 59.112 39.130 0.00 0.00 0.00 2.74
7228 10784 3.753815 ACAAAATTTTGGGGAGCATTGG 58.246 40.909 29.37 5.58 42.34 3.16
7242 10798 6.205270 GCAAATGGAATCAGGTGAACAAAATT 59.795 34.615 0.00 0.00 0.00 1.82
7443 11048 2.560504 TGTCAGTTACAAGTGCCACAG 58.439 47.619 0.00 0.00 34.29 3.66
7480 11085 9.934190 TCAGTACGTTTAAAGTTTAAATGTTCC 57.066 29.630 34.26 27.19 37.66 3.62
7637 11242 4.587262 ACCTGTAATCCAGCATATACGTGA 59.413 41.667 0.00 0.00 40.06 4.35
7700 11305 4.761739 TCTTGTCACCCTTTCAAATAGCAG 59.238 41.667 0.00 0.00 0.00 4.24
7807 11412 6.884832 TGTATGAACTGGGTTTGTAGATAGG 58.115 40.000 0.00 0.00 0.00 2.57
7917 11522 4.010349 AGCTGGCAAGTACCTATTTTCAC 58.990 43.478 0.00 0.00 0.00 3.18
7940 11547 3.181506 GGCAGAATCGGTAAGAGCTTTTG 60.182 47.826 0.00 0.00 0.00 2.44
7953 11560 1.073964 CATAGGCATCGGCAGAATCG 58.926 55.000 0.00 0.00 43.71 3.34
8178 11785 1.536662 ACCCGAGCTTCCCAGAACT 60.537 57.895 0.00 0.00 0.00 3.01
8218 11825 0.390866 CACGAAGGATGTGCTGCTCT 60.391 55.000 0.00 0.00 0.00 4.09
8295 11902 2.349755 GGTTCCGCTGCAGGGTAA 59.650 61.111 26.94 16.81 0.00 2.85
8388 11995 2.027314 CGGCCTGAGATCAGCGAG 59.973 66.667 0.00 0.00 42.47 5.03
8417 12024 2.354704 CGCAAACCTCAGGTCAAGGATA 60.355 50.000 0.00 0.00 37.35 2.59
8465 12072 3.997064 CTCCTCGCTCAAGCACCCG 62.997 68.421 2.50 0.00 42.21 5.28
8574 12184 5.078411 AGACCTGTTCATGCTAGTACAAG 57.922 43.478 0.00 0.00 0.00 3.16
8619 12229 6.584185 TTGTGTACTAAGATGTGCAGTCTA 57.416 37.500 2.20 0.00 33.52 2.59
8620 12230 5.468540 TTGTGTACTAAGATGTGCAGTCT 57.531 39.130 0.00 0.00 33.52 3.24
8621 12231 6.368791 TGATTTGTGTACTAAGATGTGCAGTC 59.631 38.462 0.00 0.00 33.52 3.51
8623 12233 6.726258 TGATTTGTGTACTAAGATGTGCAG 57.274 37.500 0.00 0.00 33.52 4.41
8624 12234 6.347321 CGTTGATTTGTGTACTAAGATGTGCA 60.347 38.462 0.00 0.00 0.00 4.57
8625 12235 6.015504 CGTTGATTTGTGTACTAAGATGTGC 58.984 40.000 0.00 0.00 0.00 4.57
8637 12247 4.307432 CTGAGGAGTACGTTGATTTGTGT 58.693 43.478 0.00 0.00 0.00 3.72
8650 12260 4.536765 TCATACATGTCTGCTGAGGAGTA 58.463 43.478 0.00 0.00 0.00 2.59
8651 12261 3.369175 TCATACATGTCTGCTGAGGAGT 58.631 45.455 0.00 0.00 0.00 3.85
8652 12262 4.603989 ATCATACATGTCTGCTGAGGAG 57.396 45.455 0.00 0.00 0.00 3.69
8653 12263 5.121105 CAAATCATACATGTCTGCTGAGGA 58.879 41.667 0.00 0.00 0.00 3.71
8654 12264 4.261072 GCAAATCATACATGTCTGCTGAGG 60.261 45.833 0.00 0.00 0.00 3.86
8655 12265 4.575236 AGCAAATCATACATGTCTGCTGAG 59.425 41.667 0.00 0.00 37.00 3.35
8656 12266 4.520179 AGCAAATCATACATGTCTGCTGA 58.480 39.130 0.00 2.09 37.00 4.26
8657 12267 4.895224 AGCAAATCATACATGTCTGCTG 57.105 40.909 0.00 2.79 37.00 4.41
8658 12268 6.293698 TCATAGCAAATCATACATGTCTGCT 58.706 36.000 0.00 10.62 39.46 4.24
8659 12269 6.549912 TCATAGCAAATCATACATGTCTGC 57.450 37.500 0.00 3.33 0.00 4.26
8660 12270 9.961265 AAAATCATAGCAAATCATACATGTCTG 57.039 29.630 0.00 2.54 0.00 3.51
8736 12346 5.773680 AGGCATCATCCCATTTAAATCTCTG 59.226 40.000 0.00 0.00 0.00 3.35
8744 12354 4.523943 GCATACAAGGCATCATCCCATTTA 59.476 41.667 0.00 0.00 0.00 1.40
8769 12379 5.460646 AGTTGGAAAAATGTCAGCGTAATG 58.539 37.500 0.00 0.00 0.00 1.90
8793 12403 9.566432 GAGGGAGTATTGATTATGATGAAAAGT 57.434 33.333 0.00 0.00 0.00 2.66
8814 12424 5.878669 GCTCTTTTATTTCTTTACGGAGGGA 59.121 40.000 0.00 0.00 0.00 4.20
8815 12425 5.220605 CGCTCTTTTATTTCTTTACGGAGGG 60.221 44.000 0.00 0.00 0.00 4.30
8816 12426 5.350640 ACGCTCTTTTATTTCTTTACGGAGG 59.649 40.000 0.00 0.00 0.00 4.30
8817 12427 6.404712 ACGCTCTTTTATTTCTTTACGGAG 57.595 37.500 0.00 0.00 0.00 4.63
8818 12428 6.424509 TGAACGCTCTTTTATTTCTTTACGGA 59.575 34.615 0.00 0.00 0.00 4.69
8819 12429 6.595794 TGAACGCTCTTTTATTTCTTTACGG 58.404 36.000 0.00 0.00 0.00 4.02
8821 12431 9.479278 GATCTGAACGCTCTTTTATTTCTTTAC 57.521 33.333 0.00 0.00 0.00 2.01
8822 12432 9.214957 TGATCTGAACGCTCTTTTATTTCTTTA 57.785 29.630 0.00 0.00 0.00 1.85
8823 12433 8.017946 GTGATCTGAACGCTCTTTTATTTCTTT 58.982 33.333 0.00 0.00 0.00 2.52
8825 12435 6.876257 AGTGATCTGAACGCTCTTTTATTTCT 59.124 34.615 0.00 0.00 0.00 2.52
8826 12436 7.066374 AGTGATCTGAACGCTCTTTTATTTC 57.934 36.000 0.00 0.00 0.00 2.17
8827 12437 7.819900 AGTAGTGATCTGAACGCTCTTTTATTT 59.180 33.333 4.17 0.00 0.00 1.40
8828 12438 7.324178 AGTAGTGATCTGAACGCTCTTTTATT 58.676 34.615 4.17 0.00 0.00 1.40
8830 12440 6.268825 AGTAGTGATCTGAACGCTCTTTTA 57.731 37.500 4.17 0.00 0.00 1.52
8831 12441 5.140747 AGTAGTGATCTGAACGCTCTTTT 57.859 39.130 4.17 0.00 0.00 2.27
8833 12443 4.792521 AAGTAGTGATCTGAACGCTCTT 57.207 40.909 4.17 5.99 0.00 2.85
8835 12445 5.642686 ACTAAAGTAGTGATCTGAACGCTC 58.357 41.667 4.17 0.00 37.69 5.03
8836 12446 5.646577 ACTAAAGTAGTGATCTGAACGCT 57.353 39.130 6.26 6.26 37.69 5.07
8878 12488 9.496710 TGTAATTGGTACTCCCTCTATAAAGAA 57.503 33.333 0.00 0.00 33.46 2.52
8879 12489 8.921205 GTGTAATTGGTACTCCCTCTATAAAGA 58.079 37.037 0.00 0.00 33.46 2.52
8880 12490 8.925338 AGTGTAATTGGTACTCCCTCTATAAAG 58.075 37.037 0.00 0.00 33.46 1.85
8883 12493 7.359849 ACAGTGTAATTGGTACTCCCTCTATA 58.640 38.462 0.00 0.00 33.46 1.31
8885 12495 5.586877 ACAGTGTAATTGGTACTCCCTCTA 58.413 41.667 0.00 0.00 33.46 2.43
8887 12497 4.820894 ACAGTGTAATTGGTACTCCCTC 57.179 45.455 0.00 0.00 33.46 4.30
8888 12498 5.544948 TGTTACAGTGTAATTGGTACTCCCT 59.455 40.000 18.35 0.00 33.46 4.20
8889 12499 5.797051 TGTTACAGTGTAATTGGTACTCCC 58.203 41.667 18.35 2.99 33.46 4.30
8890 12500 7.064253 GTGATGTTACAGTGTAATTGGTACTCC 59.936 40.741 18.35 3.66 33.46 3.85
8891 12501 7.601130 TGTGATGTTACAGTGTAATTGGTACTC 59.399 37.037 18.35 4.33 33.46 2.59
8892 12502 7.446769 TGTGATGTTACAGTGTAATTGGTACT 58.553 34.615 18.35 0.00 33.46 2.73
8893 12503 7.661127 TGTGATGTTACAGTGTAATTGGTAC 57.339 36.000 18.35 13.69 0.00 3.34
8894 12504 7.899178 CTGTGATGTTACAGTGTAATTGGTA 57.101 36.000 18.35 4.60 42.38 3.25
8906 12516 7.067008 TCGATGATCTCTAACTGTGATGTTACA 59.933 37.037 0.00 0.00 0.00 2.41
8907 12517 7.377397 GTCGATGATCTCTAACTGTGATGTTAC 59.623 40.741 0.00 0.00 0.00 2.50
8933 13938 2.001812 AGTGCTGCGAACTGTATCAG 57.998 50.000 0.00 0.00 37.52 2.90
8937 13942 1.883926 TCTGTAGTGCTGCGAACTGTA 59.116 47.619 3.14 0.00 0.00 2.74
8948 13953 1.807573 GCGTCCTGCTCTGTAGTGC 60.808 63.158 0.00 0.00 41.73 4.40
8970 13975 2.289002 CCATGCTTAGATGGAACGCTTC 59.711 50.000 0.00 0.00 45.24 3.86
8978 13983 0.179048 TGACCGCCATGCTTAGATGG 60.179 55.000 0.00 0.00 45.20 3.51



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.