Multiple sequence alignment - TraesCS1B01G219100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G219100 chr1B 100.000 3679 0 0 1 3679 396530126 396533804 0.000000e+00 6794.0
1 TraesCS1B01G219100 chr1D 93.271 2140 103 19 899 3031 295133950 295136055 0.000000e+00 3116.0
2 TraesCS1B01G219100 chr1D 91.148 418 35 2 1 417 295102766 295103182 1.920000e-157 566.0
3 TraesCS1B01G219100 chr1D 89.735 302 26 4 3060 3359 295136213 295136511 7.460000e-102 381.0
4 TraesCS1B01G219100 chr1D 86.765 68 8 1 3337 3404 3368863 3368797 1.420000e-09 75.0
5 TraesCS1B01G219100 chr1A 93.484 1504 75 16 899 2392 368196490 368197980 0.000000e+00 2213.0
6 TraesCS1B01G219100 chr1A 89.274 606 59 5 1 605 368153469 368154069 0.000000e+00 754.0
7 TraesCS1B01G219100 chr1A 89.112 597 43 14 2440 3031 368197981 368198560 0.000000e+00 723.0
8 TraesCS1B01G219100 chr1A 89.683 252 22 4 3037 3287 368198663 368198911 5.930000e-83 318.0
9 TraesCS1B01G219100 chr1A 95.918 98 4 0 3394 3491 368198972 368199069 3.800000e-35 159.0
10 TraesCS1B01G219100 chr4A 85.849 636 79 7 1 628 626240875 626240243 0.000000e+00 665.0
11 TraesCS1B01G219100 chr3B 83.192 708 93 13 1 688 782831079 782830378 3.120000e-175 625.0
12 TraesCS1B01G219100 chr4D 82.695 653 92 13 2 641 459612133 459611489 8.920000e-156 560.0
13 TraesCS1B01G219100 chr4D 83.112 527 74 12 15 533 493967675 493968194 2.000000e-127 466.0
14 TraesCS1B01G219100 chr7D 84.630 540 73 8 1 532 183717777 183718314 2.520000e-146 529.0
15 TraesCS1B01G219100 chr7D 94.118 51 3 0 3354 3404 311882042 311882092 1.100000e-10 78.7
16 TraesCS1B01G219100 chr3D 84.820 527 64 12 15 532 408312339 408312858 1.960000e-142 516.0
17 TraesCS1B01G219100 chr5A 83.236 513 69 15 4 504 673441526 673442033 4.330000e-124 455.0
18 TraesCS1B01G219100 chr5A 96.000 50 2 0 3348 3397 472311035 472310986 8.470000e-12 82.4
19 TraesCS1B01G219100 chr7A 80.296 609 84 22 93 685 721224640 721225228 9.440000e-116 427.0
20 TraesCS1B01G219100 chr5B 97.917 48 1 0 3354 3401 591477066 591477019 2.350000e-12 84.2
21 TraesCS1B01G219100 chr3A 96.000 50 2 0 3348 3397 737369270 737369221 8.470000e-12 82.4
22 TraesCS1B01G219100 chr3A 92.857 56 2 2 3343 3397 34827871 34827925 3.050000e-11 80.5
23 TraesCS1B01G219100 chr3A 88.889 63 4 3 3338 3398 720370543 720370604 1.420000e-09 75.0
24 TraesCS1B01G219100 chr6D 90.000 60 6 0 3354 3413 237751397 237751338 1.100000e-10 78.7
25 TraesCS1B01G219100 chrUn 89.655 58 5 1 3340 3397 253929064 253929120 5.100000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G219100 chr1B 396530126 396533804 3678 False 6794.00 6794 100.00000 1 3679 1 chr1B.!!$F1 3678
1 TraesCS1B01G219100 chr1D 295133950 295136511 2561 False 1748.50 3116 91.50300 899 3359 2 chr1D.!!$F2 2460
2 TraesCS1B01G219100 chr1A 368196490 368199069 2579 False 853.25 2213 92.04925 899 3491 4 chr1A.!!$F2 2592
3 TraesCS1B01G219100 chr1A 368153469 368154069 600 False 754.00 754 89.27400 1 605 1 chr1A.!!$F1 604
4 TraesCS1B01G219100 chr4A 626240243 626240875 632 True 665.00 665 85.84900 1 628 1 chr4A.!!$R1 627
5 TraesCS1B01G219100 chr3B 782830378 782831079 701 True 625.00 625 83.19200 1 688 1 chr3B.!!$R1 687
6 TraesCS1B01G219100 chr4D 459611489 459612133 644 True 560.00 560 82.69500 2 641 1 chr4D.!!$R1 639
7 TraesCS1B01G219100 chr4D 493967675 493968194 519 False 466.00 466 83.11200 15 533 1 chr4D.!!$F1 518
8 TraesCS1B01G219100 chr7D 183717777 183718314 537 False 529.00 529 84.63000 1 532 1 chr7D.!!$F1 531
9 TraesCS1B01G219100 chr3D 408312339 408312858 519 False 516.00 516 84.82000 15 532 1 chr3D.!!$F1 517
10 TraesCS1B01G219100 chr5A 673441526 673442033 507 False 455.00 455 83.23600 4 504 1 chr5A.!!$F1 500
11 TraesCS1B01G219100 chr7A 721224640 721225228 588 False 427.00 427 80.29600 93 685 1 chr7A.!!$F1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 84 0.034089 GGGGTGAGGGACAAGGAATG 60.034 60.0 0.00 0.0 0.00 2.67 F
218 230 0.036448 AGTGAAGAGGTCGTCCGAGA 59.964 55.0 0.00 0.0 39.05 4.04 F
554 575 0.039035 GGGTTGGGCAATGTAGGTGA 59.961 55.0 0.00 0.0 0.00 4.02 F
716 746 0.118346 AGGGATGGTGGTGGTAGTGA 59.882 55.0 0.00 0.0 0.00 3.41 F
857 887 0.179156 TATTTGGTCGGACGTCTCGC 60.179 55.0 16.46 12.4 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1021 1052 1.227383 GGATTTGGCGGTGGAGGAT 59.773 57.895 0.00 0.00 0.00 3.24 R
1115 1146 1.367471 CGCCATATTCTCCTCGGCA 59.633 57.895 0.00 0.00 43.13 5.69 R
2510 2550 1.117994 TCCTCGATCAGCTCAGCAAT 58.882 50.000 0.00 0.00 0.00 3.56 R
2608 2648 0.453793 CTCAGTCCGTCTGCAGGTAG 59.546 60.000 15.13 5.45 43.32 3.18 R
2835 2875 0.034670 GCTGCCCAACTTCTCCAGAT 60.035 55.000 0.00 0.00 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.093711 TGGCGCTTGCTCAAAGATAGTA 60.094 45.455 7.64 0.00 38.24 1.82
81 84 0.034089 GGGGTGAGGGACAAGGAATG 60.034 60.000 0.00 0.00 0.00 2.67
120 128 6.015940 GGTTCTCTTGTCAAATTGGAAGATGT 60.016 38.462 8.21 0.00 0.00 3.06
152 160 3.866651 AGTGATGATGCACCAAGAGTAC 58.133 45.455 0.00 0.00 39.59 2.73
155 163 0.249120 TGATGCACCAAGAGTACGGG 59.751 55.000 0.00 0.00 0.00 5.28
156 168 0.535335 GATGCACCAAGAGTACGGGA 59.465 55.000 0.00 0.00 0.00 5.14
163 175 3.818773 CACCAAGAGTACGGGAAAACAAT 59.181 43.478 3.46 0.00 0.00 2.71
218 230 0.036448 AGTGAAGAGGTCGTCCGAGA 59.964 55.000 0.00 0.00 39.05 4.04
272 284 4.635765 TGGCGAAGATGAAAGAAACTATGG 59.364 41.667 0.00 0.00 0.00 2.74
295 314 3.010027 TCACCATTGGGATGCTAAAGTGA 59.990 43.478 12.91 12.91 38.05 3.41
296 315 3.956199 CACCATTGGGATGCTAAAGTGAT 59.044 43.478 7.78 0.00 38.05 3.06
301 320 4.776435 TGGGATGCTAAAGTGATCATGA 57.224 40.909 0.00 0.00 0.00 3.07
328 347 4.102367 AGAAGAAAGAGAAGCACAAGGAGT 59.898 41.667 0.00 0.00 0.00 3.85
331 350 4.591072 AGAAAGAGAAGCACAAGGAGTAGT 59.409 41.667 0.00 0.00 0.00 2.73
341 360 4.160626 GCACAAGGAGTAGTAGTGGAAGAT 59.839 45.833 0.00 0.00 0.00 2.40
343 362 4.712337 ACAAGGAGTAGTAGTGGAAGATGG 59.288 45.833 0.00 0.00 0.00 3.51
347 366 3.637694 GAGTAGTAGTGGAAGATGGGGTC 59.362 52.174 0.00 0.00 0.00 4.46
370 390 1.205655 CCTTCGAGGAGTGCAAGATCA 59.794 52.381 0.00 0.00 37.67 2.92
379 399 3.027412 GAGTGCAAGATCACCCTAGAGA 58.973 50.000 0.00 0.00 37.68 3.10
390 410 4.160329 TCACCCTAGAGAAGCAAAAGAGA 58.840 43.478 0.00 0.00 0.00 3.10
496 517 4.629200 AGTTGAGAAGAACGAAGATCATGC 59.371 41.667 0.00 0.00 0.00 4.06
517 538 1.680249 GCCGGAGAAAGATGGAGCTTT 60.680 52.381 5.05 0.00 40.59 3.51
518 539 2.012673 CCGGAGAAAGATGGAGCTTTG 58.987 52.381 0.00 0.00 38.16 2.77
554 575 0.039035 GGGTTGGGCAATGTAGGTGA 59.961 55.000 0.00 0.00 0.00 4.02
560 581 0.740737 GGCAATGTAGGTGATGGTGC 59.259 55.000 0.00 0.00 0.00 5.01
573 594 4.280019 GGTGCGGGGTTTGGAGGT 62.280 66.667 0.00 0.00 0.00 3.85
574 595 2.203437 GTGCGGGGTTTGGAGGTT 60.203 61.111 0.00 0.00 0.00 3.50
575 596 1.830847 GTGCGGGGTTTGGAGGTTT 60.831 57.895 0.00 0.00 0.00 3.27
605 626 1.003112 GGCAATGTCGGTGGTGGTA 60.003 57.895 0.00 0.00 0.00 3.25
631 652 2.123468 GGTGGTGGTGGCTTTGGT 60.123 61.111 0.00 0.00 0.00 3.67
639 669 1.283613 TGGTGGCTTTGGTATAGGTGG 59.716 52.381 0.00 0.00 0.00 4.61
640 670 1.283905 GGTGGCTTTGGTATAGGTGGT 59.716 52.381 0.00 0.00 0.00 4.16
654 684 1.112916 GGTGGTTTTGGAGGTGGTGG 61.113 60.000 0.00 0.00 0.00 4.61
657 687 1.739667 GTTTTGGAGGTGGTGGTGC 59.260 57.895 0.00 0.00 0.00 5.01
679 709 3.443045 GGCAATGGTGGCGGAGTG 61.443 66.667 0.00 0.00 40.97 3.51
681 711 2.034066 CAATGGTGGCGGAGTGGT 59.966 61.111 0.00 0.00 0.00 4.16
682 712 2.034066 AATGGTGGCGGAGTGGTG 59.966 61.111 0.00 0.00 0.00 4.17
683 713 2.829384 AATGGTGGCGGAGTGGTGT 61.829 57.895 0.00 0.00 0.00 4.16
684 714 2.351924 AATGGTGGCGGAGTGGTGTT 62.352 55.000 0.00 0.00 0.00 3.32
685 715 1.485294 ATGGTGGCGGAGTGGTGTTA 61.485 55.000 0.00 0.00 0.00 2.41
686 716 1.375523 GGTGGCGGAGTGGTGTTAG 60.376 63.158 0.00 0.00 0.00 2.34
687 717 1.669440 GTGGCGGAGTGGTGTTAGA 59.331 57.895 0.00 0.00 0.00 2.10
688 718 0.249398 GTGGCGGAGTGGTGTTAGAT 59.751 55.000 0.00 0.00 0.00 1.98
689 719 0.981183 TGGCGGAGTGGTGTTAGATT 59.019 50.000 0.00 0.00 0.00 2.40
690 720 1.066430 TGGCGGAGTGGTGTTAGATTC 60.066 52.381 0.00 0.00 0.00 2.52
691 721 1.278238 GCGGAGTGGTGTTAGATTCG 58.722 55.000 0.00 0.00 0.00 3.34
692 722 1.922570 CGGAGTGGTGTTAGATTCGG 58.077 55.000 0.00 0.00 0.00 4.30
693 723 1.653151 GGAGTGGTGTTAGATTCGGC 58.347 55.000 0.00 0.00 0.00 5.54
694 724 1.066430 GGAGTGGTGTTAGATTCGGCA 60.066 52.381 0.00 0.00 0.00 5.69
695 725 2.420129 GGAGTGGTGTTAGATTCGGCAT 60.420 50.000 0.00 0.00 0.00 4.40
696 726 3.270877 GAGTGGTGTTAGATTCGGCATT 58.729 45.455 0.00 0.00 0.00 3.56
697 727 4.439057 GAGTGGTGTTAGATTCGGCATTA 58.561 43.478 0.00 0.00 0.00 1.90
698 728 4.442706 AGTGGTGTTAGATTCGGCATTAG 58.557 43.478 0.00 0.00 0.00 1.73
699 729 3.560068 GTGGTGTTAGATTCGGCATTAGG 59.440 47.826 0.00 0.00 0.00 2.69
700 730 3.139077 GGTGTTAGATTCGGCATTAGGG 58.861 50.000 0.00 0.00 0.00 3.53
701 731 3.181458 GGTGTTAGATTCGGCATTAGGGA 60.181 47.826 0.00 0.00 0.00 4.20
702 732 4.505039 GGTGTTAGATTCGGCATTAGGGAT 60.505 45.833 0.00 0.00 0.00 3.85
703 733 4.452455 GTGTTAGATTCGGCATTAGGGATG 59.548 45.833 0.00 0.00 38.85 3.51
704 734 2.867109 AGATTCGGCATTAGGGATGG 57.133 50.000 0.00 0.00 36.21 3.51
705 735 2.057922 AGATTCGGCATTAGGGATGGT 58.942 47.619 0.00 0.00 36.21 3.55
706 736 2.154462 GATTCGGCATTAGGGATGGTG 58.846 52.381 0.00 0.00 36.21 4.17
707 737 0.182537 TTCGGCATTAGGGATGGTGG 59.817 55.000 0.00 0.00 36.21 4.61
708 738 0.986019 TCGGCATTAGGGATGGTGGT 60.986 55.000 0.00 0.00 36.21 4.16
709 739 0.819259 CGGCATTAGGGATGGTGGTG 60.819 60.000 0.00 0.00 36.21 4.17
710 740 0.468029 GGCATTAGGGATGGTGGTGG 60.468 60.000 0.00 0.00 36.21 4.61
711 741 0.258774 GCATTAGGGATGGTGGTGGT 59.741 55.000 0.00 0.00 36.21 4.16
712 742 1.493022 GCATTAGGGATGGTGGTGGTA 59.507 52.381 0.00 0.00 36.21 3.25
713 743 2.487265 GCATTAGGGATGGTGGTGGTAG 60.487 54.545 0.00 0.00 36.21 3.18
714 744 2.653543 TTAGGGATGGTGGTGGTAGT 57.346 50.000 0.00 0.00 0.00 2.73
715 745 1.874129 TAGGGATGGTGGTGGTAGTG 58.126 55.000 0.00 0.00 0.00 2.74
716 746 0.118346 AGGGATGGTGGTGGTAGTGA 59.882 55.000 0.00 0.00 0.00 3.41
717 747 0.988832 GGGATGGTGGTGGTAGTGAA 59.011 55.000 0.00 0.00 0.00 3.18
718 748 1.339727 GGGATGGTGGTGGTAGTGAAC 60.340 57.143 0.00 0.00 0.00 3.18
719 749 1.628846 GGATGGTGGTGGTAGTGAACT 59.371 52.381 0.00 0.00 0.00 3.01
720 750 2.835764 GGATGGTGGTGGTAGTGAACTA 59.164 50.000 0.00 0.00 0.00 2.24
721 751 3.262405 GGATGGTGGTGGTAGTGAACTAA 59.738 47.826 0.00 0.00 0.00 2.24
722 752 4.080526 GGATGGTGGTGGTAGTGAACTAAT 60.081 45.833 0.00 0.00 0.00 1.73
723 753 4.280436 TGGTGGTGGTAGTGAACTAATG 57.720 45.455 0.00 0.00 0.00 1.90
724 754 3.904965 TGGTGGTGGTAGTGAACTAATGA 59.095 43.478 0.00 0.00 0.00 2.57
725 755 4.251268 GGTGGTGGTAGTGAACTAATGAC 58.749 47.826 0.00 0.00 0.00 3.06
726 756 4.262721 GGTGGTGGTAGTGAACTAATGACA 60.263 45.833 0.00 0.00 0.00 3.58
727 757 4.689345 GTGGTGGTAGTGAACTAATGACAC 59.311 45.833 0.00 0.00 35.15 3.67
728 758 4.591498 TGGTGGTAGTGAACTAATGACACT 59.409 41.667 0.00 0.00 45.06 3.55
729 759 5.776208 TGGTGGTAGTGAACTAATGACACTA 59.224 40.000 0.00 0.00 43.27 2.74
730 760 6.439375 TGGTGGTAGTGAACTAATGACACTAT 59.561 38.462 0.00 0.00 44.84 2.12
731 761 6.757010 GGTGGTAGTGAACTAATGACACTATG 59.243 42.308 0.00 0.00 44.84 2.23
732 762 7.321153 GTGGTAGTGAACTAATGACACTATGT 58.679 38.462 0.00 0.00 44.84 2.29
792 822 8.594881 ATTTTACGATATCATGAAGTCAGGTC 57.405 34.615 0.00 0.00 0.00 3.85
793 823 6.961360 TTACGATATCATGAAGTCAGGTCT 57.039 37.500 0.00 0.00 0.00 3.85
794 824 5.860941 ACGATATCATGAAGTCAGGTCTT 57.139 39.130 0.00 0.00 0.00 3.01
795 825 5.837437 ACGATATCATGAAGTCAGGTCTTC 58.163 41.667 0.00 0.00 42.67 2.87
796 826 5.221342 ACGATATCATGAAGTCAGGTCTTCC 60.221 44.000 0.00 0.00 41.96 3.46
797 827 5.221322 CGATATCATGAAGTCAGGTCTTCCA 60.221 44.000 0.00 0.00 41.96 3.53
798 828 4.916041 ATCATGAAGTCAGGTCTTCCAA 57.084 40.909 0.00 0.00 41.96 3.53
799 829 4.705110 TCATGAAGTCAGGTCTTCCAAA 57.295 40.909 0.00 0.00 41.96 3.28
800 830 5.246981 TCATGAAGTCAGGTCTTCCAAAT 57.753 39.130 0.00 0.00 41.96 2.32
801 831 5.248640 TCATGAAGTCAGGTCTTCCAAATC 58.751 41.667 0.00 0.00 41.96 2.17
802 832 4.021102 TGAAGTCAGGTCTTCCAAATCC 57.979 45.455 4.30 0.00 41.96 3.01
803 833 2.770164 AGTCAGGTCTTCCAAATCCG 57.230 50.000 0.00 0.00 35.89 4.18
804 834 1.978580 AGTCAGGTCTTCCAAATCCGT 59.021 47.619 0.00 0.00 35.89 4.69
805 835 2.028020 AGTCAGGTCTTCCAAATCCGTC 60.028 50.000 0.00 0.00 35.89 4.79
806 836 1.974957 TCAGGTCTTCCAAATCCGTCA 59.025 47.619 0.00 0.00 35.89 4.35
807 837 2.571653 TCAGGTCTTCCAAATCCGTCAT 59.428 45.455 0.00 0.00 35.89 3.06
808 838 3.772572 TCAGGTCTTCCAAATCCGTCATA 59.227 43.478 0.00 0.00 35.89 2.15
809 839 4.224147 TCAGGTCTTCCAAATCCGTCATAA 59.776 41.667 0.00 0.00 35.89 1.90
810 840 4.941263 CAGGTCTTCCAAATCCGTCATAAA 59.059 41.667 0.00 0.00 35.89 1.40
811 841 5.414454 CAGGTCTTCCAAATCCGTCATAAAA 59.586 40.000 0.00 0.00 35.89 1.52
812 842 6.007703 AGGTCTTCCAAATCCGTCATAAAAA 58.992 36.000 0.00 0.00 35.89 1.94
813 843 6.663523 AGGTCTTCCAAATCCGTCATAAAAAT 59.336 34.615 0.00 0.00 35.89 1.82
814 844 7.178451 AGGTCTTCCAAATCCGTCATAAAAATT 59.822 33.333 0.00 0.00 35.89 1.82
815 845 7.817478 GGTCTTCCAAATCCGTCATAAAAATTT 59.183 33.333 0.00 0.00 0.00 1.82
816 846 9.203421 GTCTTCCAAATCCGTCATAAAAATTTT 57.797 29.630 0.00 0.00 0.00 1.82
838 868 9.892130 ATTTTAGATGACGAGTTTAAAGGATCT 57.108 29.630 0.00 0.00 0.00 2.75
843 873 9.319143 AGATGACGAGTTTAAAGGATCTATTTG 57.681 33.333 0.00 0.00 0.00 2.32
844 874 7.843490 TGACGAGTTTAAAGGATCTATTTGG 57.157 36.000 0.00 0.00 0.00 3.28
845 875 7.391620 TGACGAGTTTAAAGGATCTATTTGGT 58.608 34.615 0.00 0.00 0.00 3.67
846 876 7.548075 TGACGAGTTTAAAGGATCTATTTGGTC 59.452 37.037 0.00 0.00 0.00 4.02
847 877 6.534079 ACGAGTTTAAAGGATCTATTTGGTCG 59.466 38.462 0.00 9.97 0.00 4.79
848 878 6.018994 CGAGTTTAAAGGATCTATTTGGTCGG 60.019 42.308 6.69 0.00 0.00 4.79
849 879 6.954232 AGTTTAAAGGATCTATTTGGTCGGA 58.046 36.000 6.69 0.00 0.00 4.55
850 880 6.822170 AGTTTAAAGGATCTATTTGGTCGGAC 59.178 38.462 0.00 0.00 0.00 4.79
851 881 3.454371 AAGGATCTATTTGGTCGGACG 57.546 47.619 1.43 0.00 0.00 4.79
852 882 2.385803 AGGATCTATTTGGTCGGACGT 58.614 47.619 1.43 0.00 0.00 4.34
853 883 2.361438 AGGATCTATTTGGTCGGACGTC 59.639 50.000 7.13 7.13 0.00 4.34
854 884 2.361438 GGATCTATTTGGTCGGACGTCT 59.639 50.000 16.46 0.00 0.00 4.18
855 885 3.550436 GGATCTATTTGGTCGGACGTCTC 60.550 52.174 16.46 4.72 0.00 3.36
856 886 1.399440 TCTATTTGGTCGGACGTCTCG 59.601 52.381 16.46 16.79 0.00 4.04
857 887 0.179156 TATTTGGTCGGACGTCTCGC 60.179 55.000 16.46 12.40 0.00 5.03
861 891 3.490759 GTCGGACGTCTCGCGGTA 61.491 66.667 16.46 0.00 46.52 4.02
862 892 2.512286 TCGGACGTCTCGCGGTAT 60.512 61.111 16.46 0.00 46.52 2.73
863 893 2.052414 CGGACGTCTCGCGGTATC 60.052 66.667 16.46 0.00 46.52 2.24
864 894 2.816360 CGGACGTCTCGCGGTATCA 61.816 63.158 16.46 0.00 46.52 2.15
865 895 1.653115 GGACGTCTCGCGGTATCAT 59.347 57.895 16.46 0.00 46.52 2.45
866 896 0.870393 GGACGTCTCGCGGTATCATA 59.130 55.000 16.46 0.00 46.52 2.15
867 897 1.136029 GGACGTCTCGCGGTATCATAG 60.136 57.143 16.46 0.00 46.52 2.23
868 898 1.797046 GACGTCTCGCGGTATCATAGA 59.203 52.381 8.70 0.00 46.52 1.98
869 899 2.216046 ACGTCTCGCGGTATCATAGAA 58.784 47.619 6.13 0.00 46.52 2.10
870 900 2.615447 ACGTCTCGCGGTATCATAGAAA 59.385 45.455 6.13 0.00 46.52 2.52
871 901 3.065786 ACGTCTCGCGGTATCATAGAAAA 59.934 43.478 6.13 0.00 46.52 2.29
872 902 4.039703 CGTCTCGCGGTATCATAGAAAAA 58.960 43.478 6.13 0.00 36.85 1.94
873 903 4.680110 CGTCTCGCGGTATCATAGAAAAAT 59.320 41.667 6.13 0.00 36.85 1.82
874 904 5.175126 CGTCTCGCGGTATCATAGAAAAATT 59.825 40.000 6.13 0.00 36.85 1.82
875 905 6.292168 CGTCTCGCGGTATCATAGAAAAATTT 60.292 38.462 6.13 0.00 36.85 1.82
876 906 7.096353 CGTCTCGCGGTATCATAGAAAAATTTA 60.096 37.037 6.13 0.00 36.85 1.40
877 907 8.002665 GTCTCGCGGTATCATAGAAAAATTTAC 58.997 37.037 6.13 0.00 0.00 2.01
878 908 7.707464 TCTCGCGGTATCATAGAAAAATTTACA 59.293 33.333 6.13 0.00 0.00 2.41
879 909 7.847487 TCGCGGTATCATAGAAAAATTTACAG 58.153 34.615 6.13 0.00 0.00 2.74
880 910 6.573725 CGCGGTATCATAGAAAAATTTACAGC 59.426 38.462 0.00 0.00 0.00 4.40
881 911 6.856426 GCGGTATCATAGAAAAATTTACAGCC 59.144 38.462 0.00 0.00 0.00 4.85
882 912 7.360361 CGGTATCATAGAAAAATTTACAGCCC 58.640 38.462 0.00 0.00 0.00 5.19
883 913 7.360361 GGTATCATAGAAAAATTTACAGCCCG 58.640 38.462 0.00 0.00 0.00 6.13
884 914 7.012989 GGTATCATAGAAAAATTTACAGCCCGT 59.987 37.037 0.00 0.00 0.00 5.28
885 915 6.431198 TCATAGAAAAATTTACAGCCCGTC 57.569 37.500 0.00 0.00 0.00 4.79
886 916 5.355910 TCATAGAAAAATTTACAGCCCGTCC 59.644 40.000 0.00 0.00 0.00 4.79
887 917 2.486592 AGAAAAATTTACAGCCCGTCCG 59.513 45.455 0.00 0.00 0.00 4.79
888 918 2.188062 AAAATTTACAGCCCGTCCGA 57.812 45.000 0.00 0.00 0.00 4.55
889 919 1.734163 AAATTTACAGCCCGTCCGAG 58.266 50.000 0.00 0.00 0.00 4.63
890 920 0.611714 AATTTACAGCCCGTCCGAGT 59.388 50.000 0.00 0.00 0.00 4.18
891 921 0.611714 ATTTACAGCCCGTCCGAGTT 59.388 50.000 0.00 0.00 0.00 3.01
892 922 0.393820 TTTACAGCCCGTCCGAGTTT 59.606 50.000 0.00 0.00 0.00 2.66
893 923 0.393820 TTACAGCCCGTCCGAGTTTT 59.606 50.000 0.00 0.00 0.00 2.43
894 924 0.320073 TACAGCCCGTCCGAGTTTTG 60.320 55.000 0.00 0.00 0.00 2.44
895 925 2.668550 AGCCCGTCCGAGTTTTGC 60.669 61.111 0.00 0.00 0.00 3.68
896 926 2.668550 GCCCGTCCGAGTTTTGCT 60.669 61.111 0.00 0.00 0.00 3.91
897 927 1.375013 GCCCGTCCGAGTTTTGCTA 60.375 57.895 0.00 0.00 0.00 3.49
914 944 1.135083 GCTAGCTAGACGTGGCTTCAA 60.135 52.381 25.15 0.00 37.13 2.69
934 964 0.249741 ACGAAACCCTGACGGAACAG 60.250 55.000 0.00 0.00 37.61 3.16
1067 1098 1.987855 CCTTCGTACCCTCCTGCCA 60.988 63.158 0.00 0.00 0.00 4.92
1380 1411 4.935495 ACGCCCCCGCTGCATATG 62.935 66.667 0.00 0.00 38.22 1.78
1382 1413 4.269523 GCCCCCGCTGCATATGGA 62.270 66.667 4.56 0.00 0.00 3.41
1383 1414 2.515398 CCCCCGCTGCATATGGAA 59.485 61.111 4.56 0.00 0.00 3.53
1453 1485 5.163784 CGAAATGCTGAGATCAATGTCACTT 60.164 40.000 0.00 0.00 0.00 3.16
1529 1561 3.259064 CGTCAAGGTATTCGGTTCACAT 58.741 45.455 0.00 0.00 0.00 3.21
1679 1712 7.443259 TTTCCTCAAGGTAATTAAGTTTCGG 57.557 36.000 0.00 0.00 36.34 4.30
1680 1713 6.117975 TCCTCAAGGTAATTAAGTTTCGGT 57.882 37.500 0.00 0.00 36.34 4.69
1684 1717 6.536447 TCAAGGTAATTAAGTTTCGGTCCTT 58.464 36.000 0.00 0.00 33.79 3.36
1691 1724 9.159364 GTAATTAAGTTTCGGTCCTTCTGTAAT 57.841 33.333 0.00 0.00 0.00 1.89
1692 1725 8.631480 AATTAAGTTTCGGTCCTTCTGTAATT 57.369 30.769 0.00 0.00 0.00 1.40
1703 1736 6.713450 GGTCCTTCTGTAATTGAAGTTTACCA 59.287 38.462 11.54 0.00 39.24 3.25
1705 1738 8.626526 GTCCTTCTGTAATTGAAGTTTACCAAA 58.373 33.333 0.00 0.00 39.24 3.28
1889 1928 8.677148 AGCTTACTCTCATTAGAAACAAACAA 57.323 30.769 0.00 0.00 0.00 2.83
2138 2177 2.264813 CTTGCCAAATGCCTTCAATCG 58.735 47.619 0.00 0.00 40.16 3.34
2185 2225 3.372954 GTCGATCGCTAGTTAACATGCT 58.627 45.455 11.09 0.00 0.00 3.79
2203 2243 2.948979 TGCTTGTTCGGTTCACAGATTT 59.051 40.909 0.00 0.00 0.00 2.17
2290 2330 1.237285 CGCCTTCCCAGAAACAGGTG 61.237 60.000 0.00 0.00 0.00 4.00
2360 2400 1.745232 AACAGCGTCTTTCCACACAA 58.255 45.000 0.00 0.00 0.00 3.33
2393 2433 7.490962 AAGACTGTGTGACGAAATAAATTCA 57.509 32.000 0.00 0.00 37.96 2.57
2395 2435 8.099364 AGACTGTGTGACGAAATAAATTCAAT 57.901 30.769 0.00 0.00 37.96 2.57
2402 2442 8.303156 TGTGACGAAATAAATTCAATTGTGGAT 58.697 29.630 5.13 0.00 37.96 3.41
2417 2457 2.239402 TGTGGATGCTTTATCTCAGGCA 59.761 45.455 0.00 0.00 39.06 4.75
2439 2479 3.068165 AGTGTGTCATCAAACTGACGAGA 59.932 43.478 0.00 0.00 46.89 4.04
2510 2550 1.608025 CCAACAGCGCAGAGAAGGTTA 60.608 52.381 11.47 0.00 0.00 2.85
2519 2559 2.354199 GCAGAGAAGGTTATTGCTGAGC 59.646 50.000 0.00 0.00 0.00 4.26
2564 2604 0.961019 TGAGATGCTGGTTTGTTGCC 59.039 50.000 0.00 0.00 0.00 4.52
2583 2623 1.002430 CCTCTGACTGCTGCCAACTTA 59.998 52.381 0.00 0.00 0.00 2.24
2585 2625 2.935201 CTCTGACTGCTGCCAACTTATC 59.065 50.000 0.00 0.00 0.00 1.75
2590 2630 3.490348 ACTGCTGCCAACTTATCTGTTT 58.510 40.909 0.00 0.00 0.00 2.83
2598 2638 7.346751 TGCCAACTTATCTGTTTTTCTTCTT 57.653 32.000 0.00 0.00 0.00 2.52
2600 2640 7.285401 TGCCAACTTATCTGTTTTTCTTCTTCT 59.715 33.333 0.00 0.00 0.00 2.85
2601 2641 7.592903 GCCAACTTATCTGTTTTTCTTCTTCTG 59.407 37.037 0.00 0.00 0.00 3.02
2602 2642 8.840321 CCAACTTATCTGTTTTTCTTCTTCTGA 58.160 33.333 0.00 0.00 0.00 3.27
2604 2644 9.620259 AACTTATCTGTTTTTCTTCTTCTGACT 57.380 29.630 0.00 0.00 0.00 3.41
2605 2645 9.620259 ACTTATCTGTTTTTCTTCTTCTGACTT 57.380 29.630 0.00 0.00 0.00 3.01
2608 2648 6.555315 TCTGTTTTTCTTCTTCTGACTTTGC 58.445 36.000 0.00 0.00 0.00 3.68
2699 2739 4.827835 TGATGGTAGTATGTCTCAGGTAGC 59.172 45.833 0.00 0.00 0.00 3.58
2702 2742 4.073549 GGTAGTATGTCTCAGGTAGCGAT 58.926 47.826 0.00 0.00 0.00 4.58
2720 2760 2.852495 ATCCGTCCGCAGCGACAAAT 62.852 55.000 18.75 6.10 32.74 2.32
2743 2783 0.743097 GGCAGCATTGAACTGATCCC 59.257 55.000 0.00 0.00 37.32 3.85
2774 2814 1.200020 CTTGAAATCACCCGCTCCAAC 59.800 52.381 0.00 0.00 0.00 3.77
2781 2821 2.202932 CCCGCTCCAACTGATCCG 60.203 66.667 0.00 0.00 0.00 4.18
2782 2822 2.579201 CCGCTCCAACTGATCCGT 59.421 61.111 0.00 0.00 0.00 4.69
2788 2828 1.471287 CTCCAACTGATCCGTCGTGTA 59.529 52.381 0.00 0.00 0.00 2.90
2812 2852 4.543590 ATGTCAATCCTTCGACTGTCTT 57.456 40.909 6.21 0.00 33.18 3.01
2828 2868 6.299805 ACTGTCTTCATCTGCTGGTAAATA 57.700 37.500 0.00 0.00 0.00 1.40
2833 2873 9.679661 TGTCTTCATCTGCTGGTAAATATTAAA 57.320 29.630 0.00 0.00 0.00 1.52
2851 2891 8.870075 ATATTAAATATCTGGAGAAGTTGGGC 57.130 34.615 0.00 0.00 0.00 5.36
2852 2892 4.591321 AAATATCTGGAGAAGTTGGGCA 57.409 40.909 0.00 0.00 0.00 5.36
2853 2893 3.853355 ATATCTGGAGAAGTTGGGCAG 57.147 47.619 0.00 0.00 0.00 4.85
2854 2894 0.034670 ATCTGGAGAAGTTGGGCAGC 60.035 55.000 0.00 0.00 0.00 5.25
2855 2895 1.130054 TCTGGAGAAGTTGGGCAGCT 61.130 55.000 0.00 0.00 0.00 4.24
2856 2896 0.251077 CTGGAGAAGTTGGGCAGCTT 60.251 55.000 0.00 0.00 34.50 3.74
2857 2897 0.538057 TGGAGAAGTTGGGCAGCTTG 60.538 55.000 0.00 0.00 31.89 4.01
2878 2918 7.636326 GCTTGTACTAGCTACTTTTTCAAACA 58.364 34.615 20.15 0.00 38.15 2.83
2880 2920 8.495361 TTGTACTAGCTACTTTTTCAAACACA 57.505 30.769 0.00 0.00 0.00 3.72
3031 3097 4.595781 TCTGGTGTTGGATTAAGGTACAGT 59.404 41.667 0.00 0.00 0.00 3.55
3034 3100 6.411376 TGGTGTTGGATTAAGGTACAGTATG 58.589 40.000 0.00 0.00 46.00 2.39
3176 3371 5.222048 TGAGTTATGAGGTAAGGGTTTGCTT 60.222 40.000 0.00 0.00 0.00 3.91
3179 3374 2.500229 TGAGGTAAGGGTTTGCTTTCG 58.500 47.619 0.00 0.00 0.00 3.46
3191 3386 6.376018 AGGGTTTGCTTTCGCTTTGTATATAA 59.624 34.615 0.00 0.00 36.97 0.98
3208 3403 3.994931 ATAAAAGTCCTAGTTGGCGGT 57.005 42.857 0.00 0.00 35.26 5.68
3218 3413 2.109425 AGTTGGCGGTAAAGTGATCC 57.891 50.000 0.00 0.00 0.00 3.36
3224 3419 2.681344 GGCGGTAAAGTGATCCGAAAAT 59.319 45.455 7.01 0.00 46.05 1.82
3230 3425 6.905076 CGGTAAAGTGATCCGAAAATAATGTG 59.095 38.462 0.00 0.00 46.05 3.21
3240 3435 4.566360 CCGAAAATAATGTGACCAAATGGC 59.434 41.667 0.00 0.00 39.32 4.40
3263 3458 5.278218 GCAGAGAAGATAAAATAGCAAGCCC 60.278 44.000 0.00 0.00 0.00 5.19
3313 3515 1.229853 GGAGGGGTGAGGAAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
3314 3516 0.845102 GGAGGGGTGAGGAAAGGGAA 60.845 60.000 0.00 0.00 0.00 3.97
3319 3521 1.341089 GGGTGAGGAAAGGGAATGGAC 60.341 57.143 0.00 0.00 0.00 4.02
3325 3527 0.679960 GAAAGGGAATGGACGGTGGG 60.680 60.000 0.00 0.00 0.00 4.61
3329 3531 1.743995 GGAATGGACGGTGGGTTCG 60.744 63.158 0.00 0.00 0.00 3.95
3338 3540 3.284449 GTGGGTTCGGGTGTGCAC 61.284 66.667 10.75 10.75 0.00 4.57
3339 3541 3.798511 TGGGTTCGGGTGTGCACA 61.799 61.111 17.42 17.42 0.00 4.57
3340 3542 2.282180 GGGTTCGGGTGTGCACAT 60.282 61.111 24.69 0.00 0.00 3.21
3344 3546 0.168788 GTTCGGGTGTGCACATGATG 59.831 55.000 24.69 13.37 0.00 3.07
3362 3564 9.579768 CACATGATGCTATATTCTAAGTACTCC 57.420 37.037 0.00 0.00 0.00 3.85
3363 3565 8.754080 ACATGATGCTATATTCTAAGTACTCCC 58.246 37.037 0.00 0.00 0.00 4.30
3364 3566 8.976353 CATGATGCTATATTCTAAGTACTCCCT 58.024 37.037 0.00 0.00 0.00 4.20
3365 3567 8.582657 TGATGCTATATTCTAAGTACTCCCTC 57.417 38.462 0.00 0.00 0.00 4.30
3366 3568 7.616150 TGATGCTATATTCTAAGTACTCCCTCC 59.384 40.741 0.00 0.00 0.00 4.30
3367 3569 5.944599 TGCTATATTCTAAGTACTCCCTCCG 59.055 44.000 0.00 0.00 0.00 4.63
3368 3570 5.945191 GCTATATTCTAAGTACTCCCTCCGT 59.055 44.000 0.00 0.00 0.00 4.69
3369 3571 7.108847 GCTATATTCTAAGTACTCCCTCCGTA 58.891 42.308 0.00 0.00 0.00 4.02
3370 3572 7.609532 GCTATATTCTAAGTACTCCCTCCGTAA 59.390 40.741 0.00 0.00 0.00 3.18
3371 3573 9.512588 CTATATTCTAAGTACTCCCTCCGTAAA 57.487 37.037 0.00 0.00 0.00 2.01
3372 3574 6.712179 ATTCTAAGTACTCCCTCCGTAAAG 57.288 41.667 0.00 0.00 0.00 1.85
3373 3575 5.441718 TCTAAGTACTCCCTCCGTAAAGA 57.558 43.478 0.00 0.00 0.00 2.52
3374 3576 5.819991 TCTAAGTACTCCCTCCGTAAAGAA 58.180 41.667 0.00 0.00 0.00 2.52
3375 3577 6.248433 TCTAAGTACTCCCTCCGTAAAGAAA 58.752 40.000 0.00 0.00 0.00 2.52
3376 3578 6.894103 TCTAAGTACTCCCTCCGTAAAGAAAT 59.106 38.462 0.00 0.00 0.00 2.17
3377 3579 8.055181 TCTAAGTACTCCCTCCGTAAAGAAATA 58.945 37.037 0.00 0.00 0.00 1.40
3378 3580 7.672122 AAGTACTCCCTCCGTAAAGAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
3379 3581 8.773033 AAGTACTCCCTCCGTAAAGAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
3380 3582 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
3381 3583 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
3382 3584 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
3383 3585 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
3384 3586 7.564292 ACTCCCTCCGTAAAGAAATATAAGAGT 59.436 37.037 0.00 0.00 0.00 3.24
3385 3587 7.723324 TCCCTCCGTAAAGAAATATAAGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
3386 3588 7.343833 TCCCTCCGTAAAGAAATATAAGAGTGT 59.656 37.037 0.00 0.00 0.00 3.55
3387 3589 7.985752 CCCTCCGTAAAGAAATATAAGAGTGTT 59.014 37.037 0.00 0.00 0.00 3.32
3388 3590 9.379791 CCTCCGTAAAGAAATATAAGAGTGTTT 57.620 33.333 0.00 0.00 0.00 2.83
3418 3620 5.119931 TCATGATCAAGGGTTGTTTTTCG 57.880 39.130 0.00 0.00 0.00 3.46
3419 3621 4.582656 TCATGATCAAGGGTTGTTTTTCGT 59.417 37.500 0.00 0.00 0.00 3.85
3436 3638 9.751542 TGTTTTTCGTACACCAATAATCAAAAT 57.248 25.926 0.00 0.00 0.00 1.82
3491 3693 6.291377 TGCCTAAGATAACACCTGAATCATC 58.709 40.000 0.00 0.00 0.00 2.92
3492 3694 5.703130 GCCTAAGATAACACCTGAATCATCC 59.297 44.000 0.00 0.00 0.00 3.51
3493 3695 6.688922 GCCTAAGATAACACCTGAATCATCCA 60.689 42.308 0.00 0.00 0.00 3.41
3494 3696 6.708054 CCTAAGATAACACCTGAATCATCCAC 59.292 42.308 0.00 0.00 0.00 4.02
3495 3697 4.697514 AGATAACACCTGAATCATCCACG 58.302 43.478 0.00 0.00 0.00 4.94
3496 3698 2.859165 AACACCTGAATCATCCACGT 57.141 45.000 0.00 0.00 0.00 4.49
3497 3699 2.859165 ACACCTGAATCATCCACGTT 57.141 45.000 0.00 0.00 0.00 3.99
3498 3700 3.140325 ACACCTGAATCATCCACGTTT 57.860 42.857 0.00 0.00 0.00 3.60
3499 3701 4.280436 ACACCTGAATCATCCACGTTTA 57.720 40.909 0.00 0.00 0.00 2.01
3500 3702 4.647611 ACACCTGAATCATCCACGTTTAA 58.352 39.130 0.00 0.00 0.00 1.52
3501 3703 5.067273 ACACCTGAATCATCCACGTTTAAA 58.933 37.500 0.00 0.00 0.00 1.52
3502 3704 5.710099 ACACCTGAATCATCCACGTTTAAAT 59.290 36.000 0.00 0.00 0.00 1.40
3503 3705 6.128007 ACACCTGAATCATCCACGTTTAAATC 60.128 38.462 0.00 0.00 0.00 2.17
3504 3706 5.943416 ACCTGAATCATCCACGTTTAAATCA 59.057 36.000 0.00 0.00 0.00 2.57
3505 3707 6.128007 ACCTGAATCATCCACGTTTAAATCAC 60.128 38.462 0.00 0.00 0.00 3.06
3506 3708 6.128035 CCTGAATCATCCACGTTTAAATCACA 60.128 38.462 0.00 0.00 0.00 3.58
3507 3709 7.389803 TGAATCATCCACGTTTAAATCACAT 57.610 32.000 0.00 0.00 0.00 3.21
3508 3710 7.825681 TGAATCATCCACGTTTAAATCACATT 58.174 30.769 0.00 0.00 0.00 2.71
3509 3711 8.303156 TGAATCATCCACGTTTAAATCACATTT 58.697 29.630 0.00 0.00 36.29 2.32
3510 3712 9.139174 GAATCATCCACGTTTAAATCACATTTT 57.861 29.630 0.00 0.00 33.82 1.82
3513 3715 9.967346 TCATCCACGTTTAAATCACATTTTAAA 57.033 25.926 0.00 0.00 38.22 1.52
3593 3795 7.631717 AAACTCTCAGTATTTTCTAATGGGC 57.368 36.000 0.00 0.00 0.00 5.36
3594 3796 6.313519 ACTCTCAGTATTTTCTAATGGGCA 57.686 37.500 0.00 0.00 0.00 5.36
3595 3797 6.116126 ACTCTCAGTATTTTCTAATGGGCAC 58.884 40.000 0.00 0.00 0.00 5.01
3596 3798 6.069963 ACTCTCAGTATTTTCTAATGGGCACT 60.070 38.462 0.00 0.00 0.00 4.40
3597 3799 6.721318 TCTCAGTATTTTCTAATGGGCACTT 58.279 36.000 0.00 0.00 0.00 3.16
3598 3800 7.857456 TCTCAGTATTTTCTAATGGGCACTTA 58.143 34.615 0.00 0.00 0.00 2.24
3599 3801 8.494433 TCTCAGTATTTTCTAATGGGCACTTAT 58.506 33.333 0.00 0.00 0.00 1.73
3600 3802 9.778741 CTCAGTATTTTCTAATGGGCACTTATA 57.221 33.333 0.00 0.00 0.00 0.98
3603 3805 9.520515 AGTATTTTCTAATGGGCACTTATATGG 57.479 33.333 0.00 0.00 0.00 2.74
3604 3806 7.781324 ATTTTCTAATGGGCACTTATATGGG 57.219 36.000 0.00 0.00 0.00 4.00
3605 3807 5.922960 TTCTAATGGGCACTTATATGGGT 57.077 39.130 0.00 0.00 0.00 4.51
3606 3808 5.499004 TCTAATGGGCACTTATATGGGTC 57.501 43.478 0.00 0.00 0.00 4.46
3607 3809 5.162637 TCTAATGGGCACTTATATGGGTCT 58.837 41.667 0.00 0.00 0.00 3.85
3608 3810 4.373156 AATGGGCACTTATATGGGTCTC 57.627 45.455 0.00 0.00 0.00 3.36
3609 3811 2.770447 TGGGCACTTATATGGGTCTCA 58.230 47.619 0.00 0.00 0.00 3.27
3610 3812 2.705658 TGGGCACTTATATGGGTCTCAG 59.294 50.000 0.00 0.00 0.00 3.35
3611 3813 2.706190 GGGCACTTATATGGGTCTCAGT 59.294 50.000 0.00 0.00 0.00 3.41
3612 3814 3.136626 GGGCACTTATATGGGTCTCAGTT 59.863 47.826 0.00 0.00 0.00 3.16
3613 3815 4.385310 GGGCACTTATATGGGTCTCAGTTT 60.385 45.833 0.00 0.00 0.00 2.66
3614 3816 4.576463 GGCACTTATATGGGTCTCAGTTTG 59.424 45.833 0.00 0.00 0.00 2.93
3615 3817 4.576463 GCACTTATATGGGTCTCAGTTTGG 59.424 45.833 0.00 0.00 0.00 3.28
3616 3818 5.629133 GCACTTATATGGGTCTCAGTTTGGA 60.629 44.000 0.00 0.00 0.00 3.53
3617 3819 6.051717 CACTTATATGGGTCTCAGTTTGGAG 58.948 44.000 0.00 0.00 36.21 3.86
3618 3820 3.567478 ATATGGGTCTCAGTTTGGAGC 57.433 47.619 0.00 0.00 34.84 4.70
3619 3821 1.366319 ATGGGTCTCAGTTTGGAGCT 58.634 50.000 0.00 0.00 34.84 4.09
3620 3822 0.397941 TGGGTCTCAGTTTGGAGCTG 59.602 55.000 0.00 0.00 34.84 4.24
3621 3823 0.687354 GGGTCTCAGTTTGGAGCTGA 59.313 55.000 0.00 0.00 40.28 4.26
3622 3824 1.072331 GGGTCTCAGTTTGGAGCTGAA 59.928 52.381 0.00 0.00 41.74 3.02
3623 3825 2.290577 GGGTCTCAGTTTGGAGCTGAAT 60.291 50.000 0.00 0.00 41.74 2.57
3624 3826 3.055094 GGGTCTCAGTTTGGAGCTGAATA 60.055 47.826 0.00 0.00 41.74 1.75
3625 3827 4.384647 GGGTCTCAGTTTGGAGCTGAATAT 60.385 45.833 0.00 0.00 41.74 1.28
3626 3828 4.813697 GGTCTCAGTTTGGAGCTGAATATC 59.186 45.833 0.00 0.00 41.74 1.63
3627 3829 5.396213 GGTCTCAGTTTGGAGCTGAATATCT 60.396 44.000 0.00 0.00 41.74 1.98
3628 3830 6.183360 GGTCTCAGTTTGGAGCTGAATATCTA 60.183 42.308 0.00 0.00 41.74 1.98
3629 3831 7.268586 GTCTCAGTTTGGAGCTGAATATCTAA 58.731 38.462 0.00 0.00 41.74 2.10
3630 3832 7.223777 GTCTCAGTTTGGAGCTGAATATCTAAC 59.776 40.741 0.00 0.00 41.74 2.34
3631 3833 6.946340 TCAGTTTGGAGCTGAATATCTAACA 58.054 36.000 0.00 0.00 39.70 2.41
3632 3834 7.044181 TCAGTTTGGAGCTGAATATCTAACAG 58.956 38.462 0.00 0.00 39.70 3.16
3633 3835 6.820656 CAGTTTGGAGCTGAATATCTAACAGT 59.179 38.462 0.00 0.00 36.12 3.55
3634 3836 7.335422 CAGTTTGGAGCTGAATATCTAACAGTT 59.665 37.037 0.00 0.00 36.12 3.16
3635 3837 7.335422 AGTTTGGAGCTGAATATCTAACAGTTG 59.665 37.037 0.00 0.00 34.60 3.16
3636 3838 6.299805 TGGAGCTGAATATCTAACAGTTGT 57.700 37.500 0.00 0.00 34.60 3.32
3637 3839 6.711277 TGGAGCTGAATATCTAACAGTTGTT 58.289 36.000 0.00 2.75 41.73 2.83
3638 3840 6.595326 TGGAGCTGAATATCTAACAGTTGTTG 59.405 38.462 7.73 0.00 38.90 3.33
3639 3841 6.037610 GGAGCTGAATATCTAACAGTTGTTGG 59.962 42.308 7.73 4.98 38.90 3.77
3640 3842 5.882557 AGCTGAATATCTAACAGTTGTTGGG 59.117 40.000 7.73 1.54 38.90 4.12
3641 3843 5.880332 GCTGAATATCTAACAGTTGTTGGGA 59.120 40.000 7.73 6.41 38.90 4.37
3642 3844 6.374333 GCTGAATATCTAACAGTTGTTGGGAA 59.626 38.462 7.73 0.00 38.90 3.97
3643 3845 7.094377 GCTGAATATCTAACAGTTGTTGGGAAA 60.094 37.037 7.73 0.00 38.90 3.13
3644 3846 8.335532 TGAATATCTAACAGTTGTTGGGAAAG 57.664 34.615 7.73 0.00 38.90 2.62
3645 3847 7.942341 TGAATATCTAACAGTTGTTGGGAAAGT 59.058 33.333 7.73 0.00 38.90 2.66
3646 3848 8.706322 AATATCTAACAGTTGTTGGGAAAGTT 57.294 30.769 7.73 0.00 38.90 2.66
3647 3849 5.828299 TCTAACAGTTGTTGGGAAAGTTG 57.172 39.130 7.73 0.00 38.90 3.16
3648 3850 5.258051 TCTAACAGTTGTTGGGAAAGTTGT 58.742 37.500 7.73 0.00 38.90 3.32
3649 3851 4.450082 AACAGTTGTTGGGAAAGTTGTC 57.550 40.909 0.00 0.00 36.80 3.18
3650 3852 3.697166 ACAGTTGTTGGGAAAGTTGTCT 58.303 40.909 0.00 0.00 0.00 3.41
3651 3853 4.850680 ACAGTTGTTGGGAAAGTTGTCTA 58.149 39.130 0.00 0.00 0.00 2.59
3652 3854 5.258051 ACAGTTGTTGGGAAAGTTGTCTAA 58.742 37.500 0.00 0.00 0.00 2.10
3653 3855 5.357032 ACAGTTGTTGGGAAAGTTGTCTAAG 59.643 40.000 0.00 0.00 0.00 2.18
3654 3856 4.887655 AGTTGTTGGGAAAGTTGTCTAAGG 59.112 41.667 0.00 0.00 0.00 2.69
3655 3857 3.219281 TGTTGGGAAAGTTGTCTAAGGC 58.781 45.455 0.00 0.00 0.00 4.35
3656 3858 3.117663 TGTTGGGAAAGTTGTCTAAGGCT 60.118 43.478 0.00 0.00 0.00 4.58
3657 3859 4.103469 TGTTGGGAAAGTTGTCTAAGGCTA 59.897 41.667 0.00 0.00 0.00 3.93
3658 3860 4.281898 TGGGAAAGTTGTCTAAGGCTAC 57.718 45.455 0.00 0.00 0.00 3.58
3659 3861 3.649023 TGGGAAAGTTGTCTAAGGCTACA 59.351 43.478 0.00 0.00 0.00 2.74
3660 3862 4.288626 TGGGAAAGTTGTCTAAGGCTACAT 59.711 41.667 0.00 0.00 0.00 2.29
3661 3863 5.486063 TGGGAAAGTTGTCTAAGGCTACATA 59.514 40.000 0.00 0.00 0.00 2.29
3662 3864 6.013206 TGGGAAAGTTGTCTAAGGCTACATAA 60.013 38.462 0.00 0.00 0.00 1.90
3663 3865 7.054751 GGGAAAGTTGTCTAAGGCTACATAAT 58.945 38.462 0.00 0.00 0.00 1.28
3664 3866 7.012421 GGGAAAGTTGTCTAAGGCTACATAATG 59.988 40.741 0.00 0.00 0.00 1.90
3665 3867 7.769044 GGAAAGTTGTCTAAGGCTACATAATGA 59.231 37.037 0.00 0.00 0.00 2.57
3666 3868 9.162764 GAAAGTTGTCTAAGGCTACATAATGAA 57.837 33.333 0.00 0.00 0.00 2.57
3667 3869 9.515226 AAAGTTGTCTAAGGCTACATAATGAAA 57.485 29.630 0.00 0.00 0.00 2.69
3668 3870 9.515226 AAGTTGTCTAAGGCTACATAATGAAAA 57.485 29.630 0.00 0.00 0.00 2.29
3669 3871 8.947115 AGTTGTCTAAGGCTACATAATGAAAAC 58.053 33.333 0.00 0.00 0.00 2.43
3670 3872 8.947115 GTTGTCTAAGGCTACATAATGAAAACT 58.053 33.333 0.00 0.00 0.00 2.66
3671 3873 9.515226 TTGTCTAAGGCTACATAATGAAAACTT 57.485 29.630 0.00 0.00 0.00 2.66
3672 3874 9.162764 TGTCTAAGGCTACATAATGAAAACTTC 57.837 33.333 0.00 0.00 0.00 3.01
3673 3875 9.162764 GTCTAAGGCTACATAATGAAAACTTCA 57.837 33.333 0.00 0.00 45.01 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.986996 TGATGAAGAGTGAATGGCTGA 57.013 42.857 0.00 0.00 0.00 4.26
55 56 0.401395 TGTCCCTCACCCCACTTCTT 60.401 55.000 0.00 0.00 0.00 2.52
81 84 4.359434 AGAGAACCTTTCTTTGGGAGAC 57.641 45.455 0.00 0.00 40.87 3.36
120 128 5.243207 GTGCATCATCACTATCATCATCCA 58.757 41.667 0.00 0.00 34.29 3.41
152 160 1.507562 GGTTTGCCATTGTTTTCCCG 58.492 50.000 0.00 0.00 34.09 5.14
155 163 2.517650 TCCGGTTTGCCATTGTTTTC 57.482 45.000 0.00 0.00 34.09 2.29
156 168 2.549778 CCATCCGGTTTGCCATTGTTTT 60.550 45.455 0.00 0.00 34.09 2.43
163 175 0.468214 TGTTTCCATCCGGTTTGCCA 60.468 50.000 0.00 0.00 34.09 4.92
272 284 3.129287 CACTTTAGCATCCCAATGGTGAC 59.871 47.826 0.00 0.00 43.29 3.67
295 314 5.659463 CTTCTCTTTCTTCTCGGTCATGAT 58.341 41.667 0.00 0.00 0.00 2.45
296 315 4.619394 GCTTCTCTTTCTTCTCGGTCATGA 60.619 45.833 0.00 0.00 0.00 3.07
301 320 2.365617 TGTGCTTCTCTTTCTTCTCGGT 59.634 45.455 0.00 0.00 0.00 4.69
328 347 3.643237 CAGACCCCATCTTCCACTACTA 58.357 50.000 0.00 0.00 34.41 1.82
331 350 1.204146 GCAGACCCCATCTTCCACTA 58.796 55.000 0.00 0.00 34.41 2.74
341 360 3.003173 CCTCGAAGGCAGACCCCA 61.003 66.667 0.00 0.00 36.11 4.96
343 362 1.985116 ACTCCTCGAAGGCAGACCC 60.985 63.158 0.00 0.00 34.61 4.46
347 366 1.004560 TTGCACTCCTCGAAGGCAG 60.005 57.895 0.00 0.00 34.61 4.85
370 390 4.019771 CCTTCTCTTTTGCTTCTCTAGGGT 60.020 45.833 0.00 0.00 0.00 4.34
379 399 2.368875 TCTCGTCCCTTCTCTTTTGCTT 59.631 45.455 0.00 0.00 0.00 3.91
390 410 1.609794 GGTGGTCCTCTCGTCCCTT 60.610 63.158 0.00 0.00 0.00 3.95
471 491 5.713792 TGATCTTCGTTCTTCTCAACTCT 57.286 39.130 0.00 0.00 0.00 3.24
474 494 4.491602 CGCATGATCTTCGTTCTTCTCAAC 60.492 45.833 0.00 0.00 0.00 3.18
485 506 2.279451 TCCGGCGCATGATCTTCG 60.279 61.111 10.83 0.00 0.00 3.79
496 517 1.884926 GCTCCATCTTTCTCCGGCG 60.885 63.158 0.00 0.00 0.00 6.46
517 538 3.992999 ACCCATTGGCCATAAGATTTCA 58.007 40.909 6.09 0.00 33.59 2.69
518 539 4.696455 CAACCCATTGGCCATAAGATTTC 58.304 43.478 6.09 0.00 33.59 2.17
554 575 2.035626 CTCCAAACCCCGCACCAT 59.964 61.111 0.00 0.00 0.00 3.55
605 626 1.536676 CACCACCACCTCCAAACCT 59.463 57.895 0.00 0.00 0.00 3.50
631 652 3.009695 CACCACCTCCAAAACCACCTATA 59.990 47.826 0.00 0.00 0.00 1.31
639 669 1.739667 GCACCACCACCTCCAAAAC 59.260 57.895 0.00 0.00 0.00 2.43
640 670 1.456705 GGCACCACCACCTCCAAAA 60.457 57.895 0.00 0.00 38.86 2.44
657 687 3.762247 CGCCACCATTGCCCAAGG 61.762 66.667 0.00 0.00 0.00 3.61
673 703 1.922570 CCGAATCTAACACCACTCCG 58.077 55.000 0.00 0.00 0.00 4.63
678 708 3.433031 CCCTAATGCCGAATCTAACACCA 60.433 47.826 0.00 0.00 0.00 4.17
679 709 3.139077 CCCTAATGCCGAATCTAACACC 58.861 50.000 0.00 0.00 0.00 4.16
681 711 4.504864 CCATCCCTAATGCCGAATCTAACA 60.505 45.833 0.00 0.00 33.71 2.41
682 712 4.003648 CCATCCCTAATGCCGAATCTAAC 58.996 47.826 0.00 0.00 33.71 2.34
683 713 3.650942 ACCATCCCTAATGCCGAATCTAA 59.349 43.478 0.00 0.00 33.71 2.10
684 714 3.007940 CACCATCCCTAATGCCGAATCTA 59.992 47.826 0.00 0.00 33.71 1.98
685 715 2.057922 ACCATCCCTAATGCCGAATCT 58.942 47.619 0.00 0.00 33.71 2.40
686 716 2.154462 CACCATCCCTAATGCCGAATC 58.846 52.381 0.00 0.00 33.71 2.52
687 717 1.202927 CCACCATCCCTAATGCCGAAT 60.203 52.381 0.00 0.00 33.71 3.34
688 718 0.182537 CCACCATCCCTAATGCCGAA 59.817 55.000 0.00 0.00 33.71 4.30
689 719 0.986019 ACCACCATCCCTAATGCCGA 60.986 55.000 0.00 0.00 33.71 5.54
690 720 0.819259 CACCACCATCCCTAATGCCG 60.819 60.000 0.00 0.00 33.71 5.69
691 721 0.468029 CCACCACCATCCCTAATGCC 60.468 60.000 0.00 0.00 33.71 4.40
692 722 0.258774 ACCACCACCATCCCTAATGC 59.741 55.000 0.00 0.00 33.71 3.56
693 723 2.777692 ACTACCACCACCATCCCTAATG 59.222 50.000 0.00 0.00 34.93 1.90
694 724 2.777692 CACTACCACCACCATCCCTAAT 59.222 50.000 0.00 0.00 0.00 1.73
695 725 2.193127 CACTACCACCACCATCCCTAA 58.807 52.381 0.00 0.00 0.00 2.69
696 726 1.363280 TCACTACCACCACCATCCCTA 59.637 52.381 0.00 0.00 0.00 3.53
697 727 0.118346 TCACTACCACCACCATCCCT 59.882 55.000 0.00 0.00 0.00 4.20
698 728 0.988832 TTCACTACCACCACCATCCC 59.011 55.000 0.00 0.00 0.00 3.85
699 729 1.628846 AGTTCACTACCACCACCATCC 59.371 52.381 0.00 0.00 0.00 3.51
700 730 4.546829 TTAGTTCACTACCACCACCATC 57.453 45.455 0.00 0.00 0.00 3.51
701 731 4.534500 TCATTAGTTCACTACCACCACCAT 59.466 41.667 0.00 0.00 0.00 3.55
702 732 3.904965 TCATTAGTTCACTACCACCACCA 59.095 43.478 0.00 0.00 0.00 4.17
703 733 4.251268 GTCATTAGTTCACTACCACCACC 58.749 47.826 0.00 0.00 0.00 4.61
704 734 4.689345 GTGTCATTAGTTCACTACCACCAC 59.311 45.833 0.00 0.00 0.00 4.16
705 735 4.591498 AGTGTCATTAGTTCACTACCACCA 59.409 41.667 0.00 0.00 40.06 4.17
706 736 5.148651 AGTGTCATTAGTTCACTACCACC 57.851 43.478 0.00 0.00 40.06 4.61
707 737 7.321153 ACATAGTGTCATTAGTTCACTACCAC 58.679 38.462 6.44 0.00 43.98 4.16
708 738 7.476540 ACATAGTGTCATTAGTTCACTACCA 57.523 36.000 6.44 0.00 43.98 3.25
709 739 7.988904 GACATAGTGTCATTAGTTCACTACC 57.011 40.000 5.28 0.00 46.22 3.18
766 796 9.692749 GACCTGACTTCATGATATCGTAAAATA 57.307 33.333 0.00 0.00 0.00 1.40
767 797 8.424918 AGACCTGACTTCATGATATCGTAAAAT 58.575 33.333 0.00 0.00 0.00 1.82
768 798 7.782049 AGACCTGACTTCATGATATCGTAAAA 58.218 34.615 0.00 0.00 0.00 1.52
769 799 7.348080 AGACCTGACTTCATGATATCGTAAA 57.652 36.000 0.00 0.00 0.00 2.01
770 800 6.961360 AGACCTGACTTCATGATATCGTAA 57.039 37.500 0.00 0.00 0.00 3.18
771 801 6.016192 GGAAGACCTGACTTCATGATATCGTA 60.016 42.308 10.61 0.00 45.39 3.43
772 802 5.221342 GGAAGACCTGACTTCATGATATCGT 60.221 44.000 10.61 0.00 45.39 3.73
773 803 5.221322 TGGAAGACCTGACTTCATGATATCG 60.221 44.000 10.61 0.00 45.39 2.92
774 804 6.166984 TGGAAGACCTGACTTCATGATATC 57.833 41.667 10.61 0.00 45.39 1.63
775 805 6.566079 TTGGAAGACCTGACTTCATGATAT 57.434 37.500 10.61 0.00 45.39 1.63
776 806 6.373005 TTTGGAAGACCTGACTTCATGATA 57.627 37.500 10.61 0.00 45.39 2.15
777 807 4.916041 TTGGAAGACCTGACTTCATGAT 57.084 40.909 10.61 0.00 45.39 2.45
778 808 4.705110 TTTGGAAGACCTGACTTCATGA 57.295 40.909 10.61 0.00 45.39 3.07
779 809 4.397417 GGATTTGGAAGACCTGACTTCATG 59.603 45.833 10.61 0.00 45.39 3.07
780 810 4.593956 GGATTTGGAAGACCTGACTTCAT 58.406 43.478 10.61 0.00 45.39 2.57
781 811 3.557054 CGGATTTGGAAGACCTGACTTCA 60.557 47.826 10.61 0.00 45.39 3.02
782 812 3.003480 CGGATTTGGAAGACCTGACTTC 58.997 50.000 0.00 0.00 43.60 3.01
783 813 2.372172 ACGGATTTGGAAGACCTGACTT 59.628 45.455 0.00 0.00 37.04 3.01
784 814 1.978580 ACGGATTTGGAAGACCTGACT 59.021 47.619 0.00 0.00 37.04 3.41
785 815 2.289444 TGACGGATTTGGAAGACCTGAC 60.289 50.000 0.00 0.00 37.04 3.51
786 816 1.974957 TGACGGATTTGGAAGACCTGA 59.025 47.619 0.00 0.00 37.04 3.86
787 817 2.472695 TGACGGATTTGGAAGACCTG 57.527 50.000 0.00 0.00 37.04 4.00
788 818 4.837093 TTATGACGGATTTGGAAGACCT 57.163 40.909 0.00 0.00 37.04 3.85
789 819 5.890424 TTTTATGACGGATTTGGAAGACC 57.110 39.130 0.00 0.00 0.00 3.85
790 820 8.757164 AAATTTTTATGACGGATTTGGAAGAC 57.243 30.769 0.00 0.00 0.00 3.01
812 842 9.892130 AGATCCTTTAAACTCGTCATCTAAAAT 57.108 29.630 0.00 0.00 0.00 1.82
817 847 9.319143 CAAATAGATCCTTTAAACTCGTCATCT 57.681 33.333 0.00 0.00 0.00 2.90
818 848 8.552034 CCAAATAGATCCTTTAAACTCGTCATC 58.448 37.037 0.00 0.00 0.00 2.92
819 849 8.047310 ACCAAATAGATCCTTTAAACTCGTCAT 58.953 33.333 0.00 0.00 0.00 3.06
820 850 7.391620 ACCAAATAGATCCTTTAAACTCGTCA 58.608 34.615 0.00 0.00 0.00 4.35
821 851 7.254017 CGACCAAATAGATCCTTTAAACTCGTC 60.254 40.741 0.00 0.00 0.00 4.20
822 852 6.534079 CGACCAAATAGATCCTTTAAACTCGT 59.466 38.462 0.00 0.00 0.00 4.18
823 853 6.018994 CCGACCAAATAGATCCTTTAAACTCG 60.019 42.308 0.00 0.00 0.00 4.18
824 854 7.011202 GTCCGACCAAATAGATCCTTTAAACTC 59.989 40.741 0.00 0.00 0.00 3.01
825 855 6.822170 GTCCGACCAAATAGATCCTTTAAACT 59.178 38.462 0.00 0.00 0.00 2.66
826 856 6.238022 CGTCCGACCAAATAGATCCTTTAAAC 60.238 42.308 0.00 0.00 0.00 2.01
827 857 5.813672 CGTCCGACCAAATAGATCCTTTAAA 59.186 40.000 0.00 0.00 0.00 1.52
828 858 5.105228 ACGTCCGACCAAATAGATCCTTTAA 60.105 40.000 0.00 0.00 0.00 1.52
829 859 4.403432 ACGTCCGACCAAATAGATCCTTTA 59.597 41.667 0.00 0.00 0.00 1.85
830 860 3.197116 ACGTCCGACCAAATAGATCCTTT 59.803 43.478 0.00 0.00 0.00 3.11
831 861 2.764572 ACGTCCGACCAAATAGATCCTT 59.235 45.455 0.00 0.00 0.00 3.36
832 862 2.361438 GACGTCCGACCAAATAGATCCT 59.639 50.000 3.51 0.00 0.00 3.24
833 863 2.361438 AGACGTCCGACCAAATAGATCC 59.639 50.000 13.01 0.00 0.00 3.36
834 864 3.630101 GAGACGTCCGACCAAATAGATC 58.370 50.000 13.01 0.00 0.00 2.75
835 865 2.033049 CGAGACGTCCGACCAAATAGAT 59.967 50.000 13.01 0.00 0.00 1.98
836 866 1.399440 CGAGACGTCCGACCAAATAGA 59.601 52.381 13.01 0.00 0.00 1.98
837 867 1.823828 CGAGACGTCCGACCAAATAG 58.176 55.000 13.01 0.00 0.00 1.73
838 868 0.179156 GCGAGACGTCCGACCAAATA 60.179 55.000 24.32 0.00 0.00 1.40
839 869 1.445582 GCGAGACGTCCGACCAAAT 60.446 57.895 24.32 0.16 0.00 2.32
840 870 2.049802 GCGAGACGTCCGACCAAA 60.050 61.111 24.32 0.00 0.00 3.28
841 871 4.394078 CGCGAGACGTCCGACCAA 62.394 66.667 24.32 0.00 36.87 3.67
844 874 2.692640 GATACCGCGAGACGTCCGAC 62.693 65.000 24.32 16.06 41.42 4.79
845 875 2.512286 ATACCGCGAGACGTCCGA 60.512 61.111 24.32 8.69 41.42 4.55
846 876 2.052414 GATACCGCGAGACGTCCG 60.052 66.667 13.01 16.26 41.42 4.79
847 877 0.870393 TATGATACCGCGAGACGTCC 59.130 55.000 13.01 2.76 41.42 4.79
848 878 1.797046 TCTATGATACCGCGAGACGTC 59.203 52.381 8.23 7.70 41.42 4.34
849 879 1.875009 TCTATGATACCGCGAGACGT 58.125 50.000 8.23 0.00 41.42 4.34
850 880 2.963498 TTCTATGATACCGCGAGACG 57.037 50.000 8.23 0.00 43.15 4.18
851 881 6.526566 AATTTTTCTATGATACCGCGAGAC 57.473 37.500 8.23 0.00 0.00 3.36
852 882 7.707464 TGTAAATTTTTCTATGATACCGCGAGA 59.293 33.333 8.23 0.00 0.00 4.04
853 883 7.847487 TGTAAATTTTTCTATGATACCGCGAG 58.153 34.615 8.23 0.00 0.00 5.03
854 884 7.517734 GCTGTAAATTTTTCTATGATACCGCGA 60.518 37.037 8.23 0.00 0.00 5.87
855 885 6.573725 GCTGTAAATTTTTCTATGATACCGCG 59.426 38.462 0.00 0.00 0.00 6.46
856 886 6.856426 GGCTGTAAATTTTTCTATGATACCGC 59.144 38.462 0.00 0.00 0.00 5.68
857 887 7.360361 GGGCTGTAAATTTTTCTATGATACCG 58.640 38.462 0.00 0.00 0.00 4.02
858 888 7.012989 ACGGGCTGTAAATTTTTCTATGATACC 59.987 37.037 0.00 0.00 0.00 2.73
859 889 7.927048 ACGGGCTGTAAATTTTTCTATGATAC 58.073 34.615 0.00 0.00 0.00 2.24
860 890 7.227910 GGACGGGCTGTAAATTTTTCTATGATA 59.772 37.037 0.00 0.00 0.00 2.15
861 891 6.039382 GGACGGGCTGTAAATTTTTCTATGAT 59.961 38.462 0.00 0.00 0.00 2.45
862 892 5.355910 GGACGGGCTGTAAATTTTTCTATGA 59.644 40.000 0.00 0.00 0.00 2.15
863 893 5.578776 GGACGGGCTGTAAATTTTTCTATG 58.421 41.667 0.00 0.00 0.00 2.23
864 894 4.334481 CGGACGGGCTGTAAATTTTTCTAT 59.666 41.667 0.00 0.00 0.00 1.98
865 895 3.685756 CGGACGGGCTGTAAATTTTTCTA 59.314 43.478 0.00 0.00 0.00 2.10
866 896 2.486592 CGGACGGGCTGTAAATTTTTCT 59.513 45.455 0.00 0.00 0.00 2.52
867 897 2.485038 TCGGACGGGCTGTAAATTTTTC 59.515 45.455 0.00 0.00 0.00 2.29
868 898 2.486592 CTCGGACGGGCTGTAAATTTTT 59.513 45.455 0.00 0.00 0.00 1.94
869 899 2.081462 CTCGGACGGGCTGTAAATTTT 58.919 47.619 0.00 0.00 0.00 1.82
870 900 1.002773 ACTCGGACGGGCTGTAAATTT 59.997 47.619 0.00 0.00 0.00 1.82
871 901 0.611714 ACTCGGACGGGCTGTAAATT 59.388 50.000 0.00 0.00 0.00 1.82
872 902 0.611714 AACTCGGACGGGCTGTAAAT 59.388 50.000 0.00 0.00 0.00 1.40
873 903 0.393820 AAACTCGGACGGGCTGTAAA 59.606 50.000 0.00 0.00 0.00 2.01
874 904 0.393820 AAAACTCGGACGGGCTGTAA 59.606 50.000 0.00 0.00 0.00 2.41
875 905 0.320073 CAAAACTCGGACGGGCTGTA 60.320 55.000 0.00 0.00 0.00 2.74
876 906 1.597027 CAAAACTCGGACGGGCTGT 60.597 57.895 0.00 0.00 0.00 4.40
877 907 2.966309 GCAAAACTCGGACGGGCTG 61.966 63.158 0.00 0.00 0.00 4.85
878 908 1.823169 TAGCAAAACTCGGACGGGCT 61.823 55.000 0.00 0.00 0.00 5.19
879 909 1.359459 CTAGCAAAACTCGGACGGGC 61.359 60.000 0.00 0.00 0.00 6.13
880 910 1.359459 GCTAGCAAAACTCGGACGGG 61.359 60.000 10.63 0.00 0.00 5.28
881 911 0.389948 AGCTAGCAAAACTCGGACGG 60.390 55.000 18.83 0.00 0.00 4.79
882 912 2.159421 TCTAGCTAGCAAAACTCGGACG 60.159 50.000 18.83 0.00 0.00 4.79
883 913 3.180613 GTCTAGCTAGCAAAACTCGGAC 58.819 50.000 18.83 8.67 0.00 4.79
884 914 2.159421 CGTCTAGCTAGCAAAACTCGGA 60.159 50.000 18.83 0.10 0.00 4.55
885 915 2.186076 CGTCTAGCTAGCAAAACTCGG 58.814 52.381 18.83 0.00 0.00 4.63
886 916 2.594654 CACGTCTAGCTAGCAAAACTCG 59.405 50.000 18.83 14.97 0.00 4.18
887 917 2.924290 CCACGTCTAGCTAGCAAAACTC 59.076 50.000 18.83 1.26 0.00 3.01
888 918 2.931320 GCCACGTCTAGCTAGCAAAACT 60.931 50.000 18.83 0.00 0.00 2.66
889 919 1.393883 GCCACGTCTAGCTAGCAAAAC 59.606 52.381 18.83 10.17 0.00 2.43
890 920 1.275291 AGCCACGTCTAGCTAGCAAAA 59.725 47.619 18.83 0.49 37.64 2.44
891 921 0.895530 AGCCACGTCTAGCTAGCAAA 59.104 50.000 18.83 3.32 37.64 3.68
892 922 0.895530 AAGCCACGTCTAGCTAGCAA 59.104 50.000 18.83 0.00 38.74 3.91
893 923 0.456221 GAAGCCACGTCTAGCTAGCA 59.544 55.000 18.83 2.41 38.74 3.49
894 924 0.456221 TGAAGCCACGTCTAGCTAGC 59.544 55.000 16.35 6.62 38.74 3.42
895 925 2.924290 GTTTGAAGCCACGTCTAGCTAG 59.076 50.000 15.01 15.01 38.74 3.42
896 926 2.670229 CGTTTGAAGCCACGTCTAGCTA 60.670 50.000 4.80 0.00 38.74 3.32
897 927 1.797025 GTTTGAAGCCACGTCTAGCT 58.203 50.000 0.00 0.00 42.40 3.32
914 944 0.178533 TGTTCCGTCAGGGTTTCGTT 59.821 50.000 0.00 0.00 38.33 3.85
934 964 2.286025 GTGTGGTTTTGTACGTGGTCTC 59.714 50.000 0.00 0.00 0.00 3.36
1021 1052 1.227383 GGATTTGGCGGTGGAGGAT 59.773 57.895 0.00 0.00 0.00 3.24
1115 1146 1.367471 CGCCATATTCTCCTCGGCA 59.633 57.895 0.00 0.00 43.13 5.69
1380 1411 4.260784 CGGCAACAGAAGCTATATGTTTCC 60.261 45.833 13.64 13.64 37.03 3.13
1381 1412 4.260784 CCGGCAACAGAAGCTATATGTTTC 60.261 45.833 8.05 4.61 35.04 2.78
1382 1413 3.627577 CCGGCAACAGAAGCTATATGTTT 59.372 43.478 8.05 0.00 35.04 2.83
1383 1414 3.206150 CCGGCAACAGAAGCTATATGTT 58.794 45.455 5.53 5.53 37.64 2.71
1453 1485 3.013921 GCCTGAAATCGGGTCACAATTA 58.986 45.455 9.93 0.00 44.34 1.40
1529 1561 3.953712 TCACGCAGGTTCTAAGAATCA 57.046 42.857 0.00 0.00 0.00 2.57
1679 1712 7.739498 TGGTAAACTTCAATTACAGAAGGAC 57.261 36.000 8.42 4.26 45.18 3.85
1680 1713 8.754991 TTTGGTAAACTTCAATTACAGAAGGA 57.245 30.769 8.42 0.00 45.18 3.36
1691 1724 9.442047 ACATGTTTCATTTTTGGTAAACTTCAA 57.558 25.926 0.00 0.00 33.89 2.69
1692 1725 9.442047 AACATGTTTCATTTTTGGTAAACTTCA 57.558 25.926 4.92 0.00 33.89 3.02
1708 1741 9.953697 GTAAAATGTACTACCAAACATGTTTCA 57.046 29.630 20.85 13.88 35.61 2.69
1710 1743 9.959749 CAGTAAAATGTACTACCAAACATGTTT 57.040 29.630 18.13 18.13 35.61 2.83
1715 1748 6.993308 TCTGCAGTAAAATGTACTACCAAACA 59.007 34.615 14.67 0.00 0.00 2.83
1721 1754 8.306680 TGTTCTTCTGCAGTAAAATGTACTAC 57.693 34.615 14.67 0.00 0.00 2.73
1722 1755 8.364894 TCTGTTCTTCTGCAGTAAAATGTACTA 58.635 33.333 14.67 0.00 34.57 1.82
1723 1756 7.217200 TCTGTTCTTCTGCAGTAAAATGTACT 58.783 34.615 14.67 0.00 34.57 2.73
1732 1765 5.728637 TCAATCTCTGTTCTTCTGCAGTA 57.271 39.130 14.67 2.58 34.57 2.74
1842 1878 2.176045 TCGCTACTCCATTTCAGTGGA 58.824 47.619 0.00 0.00 45.78 4.02
1889 1928 9.950496 AACATTCTACAGTATTTTCATCTCACT 57.050 29.630 0.00 0.00 0.00 3.41
2041 2080 5.899120 TGTTTGCAAGTGTTGTTACCTTA 57.101 34.783 0.00 0.00 0.00 2.69
2138 2177 7.644157 CGGTAAATTTAAGGCTATGAAAGAAGC 59.356 37.037 0.00 0.00 38.03 3.86
2185 2225 5.568685 TTCAAAATCTGTGAACCGAACAA 57.431 34.783 0.00 0.00 30.08 2.83
2203 2243 7.465353 TGCATATTCTTTGTGGAGATTTCAA 57.535 32.000 0.00 0.00 0.00 2.69
2214 2254 7.395489 AGACCAGAAAAGATGCATATTCTTTGT 59.605 33.333 13.17 14.06 41.38 2.83
2290 2330 4.534797 TGACCTAGGACTAAGGAACTAGC 58.465 47.826 17.98 0.00 38.49 3.42
2360 2400 4.214545 TCGTCACACAGTCTTTTGTTTGTT 59.785 37.500 0.00 0.00 32.14 2.83
2393 2433 4.340381 GCCTGAGATAAAGCATCCACAATT 59.660 41.667 0.00 0.00 33.75 2.32
2395 2435 3.282021 GCCTGAGATAAAGCATCCACAA 58.718 45.455 0.00 0.00 33.75 3.33
2402 2442 2.038952 ACACACTGCCTGAGATAAAGCA 59.961 45.455 0.00 0.00 0.00 3.91
2439 2479 1.143684 ACCCTGAACAGTGAGCAACAT 59.856 47.619 0.00 0.00 0.00 2.71
2510 2550 1.117994 TCCTCGATCAGCTCAGCAAT 58.882 50.000 0.00 0.00 0.00 3.56
2519 2559 4.752101 GTCACCCATTATTTCCTCGATCAG 59.248 45.833 0.00 0.00 0.00 2.90
2564 2604 2.462456 TAAGTTGGCAGCAGTCAGAG 57.538 50.000 3.63 0.00 0.00 3.35
2583 2623 7.067981 AGCAAAGTCAGAAGAAGAAAAACAGAT 59.932 33.333 0.00 0.00 0.00 2.90
2585 2625 6.558909 AGCAAAGTCAGAAGAAGAAAAACAG 58.441 36.000 0.00 0.00 0.00 3.16
2590 2630 5.760253 CAGGTAGCAAAGTCAGAAGAAGAAA 59.240 40.000 0.00 0.00 0.00 2.52
2607 2647 1.153745 CAGTCCGTCTGCAGGTAGC 60.154 63.158 15.13 1.23 45.96 3.58
2608 2648 0.453793 CTCAGTCCGTCTGCAGGTAG 59.546 60.000 15.13 5.45 43.32 3.18
2635 2675 3.754965 TGCAGGTAGTGAAGCAAGAAAT 58.245 40.909 0.00 0.00 33.48 2.17
2679 2719 3.118149 TCGCTACCTGAGACATACTACCA 60.118 47.826 0.00 0.00 0.00 3.25
2702 2742 3.583276 ATTTGTCGCTGCGGACGGA 62.583 57.895 23.03 11.12 39.83 4.69
2713 2753 2.095110 TCAATGCTGCCTGAATTTGTCG 60.095 45.455 0.00 0.00 0.00 4.35
2720 2760 2.275134 TCAGTTCAATGCTGCCTGAA 57.725 45.000 9.44 9.44 31.36 3.02
2743 2783 4.082026 GGGTGATTTCAAGAGACCATTTGG 60.082 45.833 0.00 0.00 42.17 3.28
2774 2814 3.924073 TGACATTTTACACGACGGATCAG 59.076 43.478 0.00 0.00 0.00 2.90
2781 2821 5.119588 TCGAAGGATTGACATTTTACACGAC 59.880 40.000 0.00 0.00 0.00 4.34
2782 2822 5.119588 GTCGAAGGATTGACATTTTACACGA 59.880 40.000 0.00 0.00 35.20 4.35
2788 2828 5.308825 AGACAGTCGAAGGATTGACATTTT 58.691 37.500 0.00 0.00 37.58 1.82
2828 2868 6.672593 TGCCCAACTTCTCCAGATATTTAAT 58.327 36.000 0.00 0.00 0.00 1.40
2833 2873 2.158696 GCTGCCCAACTTCTCCAGATAT 60.159 50.000 0.00 0.00 0.00 1.63
2834 2874 1.210478 GCTGCCCAACTTCTCCAGATA 59.790 52.381 0.00 0.00 0.00 1.98
2835 2875 0.034670 GCTGCCCAACTTCTCCAGAT 60.035 55.000 0.00 0.00 0.00 2.90
2836 2876 1.130054 AGCTGCCCAACTTCTCCAGA 61.130 55.000 0.00 0.00 0.00 3.86
2837 2877 0.251077 AAGCTGCCCAACTTCTCCAG 60.251 55.000 0.00 0.00 0.00 3.86
2838 2878 0.538057 CAAGCTGCCCAACTTCTCCA 60.538 55.000 0.00 0.00 0.00 3.86
2839 2879 0.538287 ACAAGCTGCCCAACTTCTCC 60.538 55.000 0.00 0.00 0.00 3.71
2840 2880 1.807142 GTACAAGCTGCCCAACTTCTC 59.193 52.381 0.00 0.00 0.00 2.87
2841 2881 1.421646 AGTACAAGCTGCCCAACTTCT 59.578 47.619 0.00 0.00 0.00 2.85
2842 2882 1.897560 AGTACAAGCTGCCCAACTTC 58.102 50.000 0.00 0.00 0.00 3.01
2843 2883 2.876079 GCTAGTACAAGCTGCCCAACTT 60.876 50.000 0.00 0.00 39.50 2.66
2844 2884 1.339151 GCTAGTACAAGCTGCCCAACT 60.339 52.381 0.00 0.00 39.50 3.16
2845 2885 1.087501 GCTAGTACAAGCTGCCCAAC 58.912 55.000 0.00 0.00 39.50 3.77
2846 2886 3.551259 GCTAGTACAAGCTGCCCAA 57.449 52.632 0.00 0.00 39.50 4.12
2853 2893 7.586664 GTGTTTGAAAAAGTAGCTAGTACAAGC 59.413 37.037 0.35 8.86 43.11 4.01
2854 2894 8.609176 TGTGTTTGAAAAAGTAGCTAGTACAAG 58.391 33.333 0.35 0.00 33.55 3.16
2855 2895 8.392612 GTGTGTTTGAAAAAGTAGCTAGTACAA 58.607 33.333 0.35 4.32 33.55 2.41
2856 2896 7.549842 TGTGTGTTTGAAAAAGTAGCTAGTACA 59.450 33.333 0.35 0.00 33.55 2.90
2857 2897 7.912383 TGTGTGTTTGAAAAAGTAGCTAGTAC 58.088 34.615 0.35 0.00 0.00 2.73
2878 2918 4.410225 CAGGGCTTGCATCTGTGT 57.590 55.556 0.00 0.00 0.00 3.72
2902 2964 9.850628 CATCTCAGTTTCAAATGTACATTGATT 57.149 29.630 21.46 3.62 0.00 2.57
3073 3268 7.406031 TCATCCGTACTACTTCAAGAAAGAT 57.594 36.000 0.00 0.00 38.44 2.40
3176 3371 9.880157 AACTAGGACTTTTATATACAAAGCGAA 57.120 29.630 13.08 0.00 35.02 4.70
3179 3374 8.343366 GCCAACTAGGACTTTTATATACAAAGC 58.657 37.037 13.08 8.67 41.22 3.51
3191 3386 3.072038 ACTTTACCGCCAACTAGGACTTT 59.928 43.478 0.00 0.00 41.22 2.66
3200 3395 0.725117 CGGATCACTTTACCGCCAAC 59.275 55.000 0.00 0.00 40.19 3.77
3208 3403 7.608376 TGGTCACATTATTTTCGGATCACTTTA 59.392 33.333 0.00 0.00 0.00 1.85
3218 3413 5.167121 TGCCATTTGGTCACATTATTTTCG 58.833 37.500 0.00 0.00 37.57 3.46
3224 3419 4.299586 TCTCTGCCATTTGGTCACATTA 57.700 40.909 0.00 0.00 37.57 1.90
3230 3425 6.515272 TTTTATCTTCTCTGCCATTTGGTC 57.485 37.500 0.00 0.00 37.57 4.02
3240 3435 6.017275 CAGGGCTTGCTATTTTATCTTCTCTG 60.017 42.308 0.00 0.00 0.00 3.35
3263 3458 1.671261 CCAGAGAGGCGACAAGAACAG 60.671 57.143 0.00 0.00 0.00 3.16
3290 3485 4.779733 TCCTCACCCCTCCTCGGC 62.780 72.222 0.00 0.00 0.00 5.54
3313 3515 2.349755 CCGAACCCACCGTCCATT 59.650 61.111 0.00 0.00 0.00 3.16
3314 3516 3.712907 CCCGAACCCACCGTCCAT 61.713 66.667 0.00 0.00 0.00 3.41
3325 3527 0.168788 CATCATGTGCACACCCGAAC 59.831 55.000 24.37 0.00 0.00 3.95
3338 3540 8.976353 AGGGAGTACTTAGAATATAGCATCATG 58.024 37.037 0.00 0.00 0.00 3.07
3339 3541 9.196139 GAGGGAGTACTTAGAATATAGCATCAT 57.804 37.037 0.00 0.00 0.00 2.45
3340 3542 7.616150 GGAGGGAGTACTTAGAATATAGCATCA 59.384 40.741 0.00 0.00 0.00 3.07
3344 3546 5.945191 ACGGAGGGAGTACTTAGAATATAGC 59.055 44.000 0.00 0.00 0.00 2.97
3354 3556 7.672122 ATATTTCTTTACGGAGGGAGTACTT 57.328 36.000 0.00 0.00 0.00 2.24
3356 3558 8.854117 TCTTATATTTCTTTACGGAGGGAGTAC 58.146 37.037 0.00 0.00 0.00 2.73
3357 3559 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
3358 3560 7.564292 ACTCTTATATTTCTTTACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
3359 3561 7.868415 CACTCTTATATTTCTTTACGGAGGGAG 59.132 40.741 0.00 0.00 0.00 4.30
3360 3562 7.343833 ACACTCTTATATTTCTTTACGGAGGGA 59.656 37.037 0.00 0.00 0.00 4.20
3361 3563 7.498443 ACACTCTTATATTTCTTTACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
3362 3564 8.943909 AACACTCTTATATTTCTTTACGGAGG 57.056 34.615 0.00 0.00 0.00 4.30
3392 3594 4.371624 AACAACCCTTGATCATGAGTGA 57.628 40.909 10.07 0.00 39.04 3.41
3436 3638 8.189119 AGAGAACAATATTGCCCAACTTAAAA 57.811 30.769 15.48 0.00 0.00 1.52
3465 3667 5.189736 TGATTCAGGTGTTATCTTAGGCAGT 59.810 40.000 0.00 0.00 0.00 4.40
3491 3693 9.312146 GCATTTTAAAATGTGATTTAAACGTGG 57.688 29.630 31.43 9.95 45.77 4.94
3567 3769 8.523658 GCCCATTAGAAAATACTGAGAGTTTTT 58.476 33.333 0.00 0.00 32.13 1.94
3568 3770 7.669722 TGCCCATTAGAAAATACTGAGAGTTTT 59.330 33.333 0.00 0.00 0.00 2.43
3569 3771 7.121315 GTGCCCATTAGAAAATACTGAGAGTTT 59.879 37.037 0.00 0.00 0.00 2.66
3570 3772 6.599638 GTGCCCATTAGAAAATACTGAGAGTT 59.400 38.462 0.00 0.00 0.00 3.01
3571 3773 6.069963 AGTGCCCATTAGAAAATACTGAGAGT 60.070 38.462 0.00 0.00 0.00 3.24
3572 3774 6.352516 AGTGCCCATTAGAAAATACTGAGAG 58.647 40.000 0.00 0.00 0.00 3.20
3573 3775 6.313519 AGTGCCCATTAGAAAATACTGAGA 57.686 37.500 0.00 0.00 0.00 3.27
3574 3776 8.682936 ATAAGTGCCCATTAGAAAATACTGAG 57.317 34.615 0.00 0.00 0.00 3.35
3577 3779 9.520515 CCATATAAGTGCCCATTAGAAAATACT 57.479 33.333 0.00 0.00 0.00 2.12
3578 3780 8.739972 CCCATATAAGTGCCCATTAGAAAATAC 58.260 37.037 0.00 0.00 0.00 1.89
3579 3781 8.452868 ACCCATATAAGTGCCCATTAGAAAATA 58.547 33.333 0.00 0.00 0.00 1.40
3580 3782 7.305246 ACCCATATAAGTGCCCATTAGAAAAT 58.695 34.615 0.00 0.00 0.00 1.82
3581 3783 6.678547 ACCCATATAAGTGCCCATTAGAAAA 58.321 36.000 0.00 0.00 0.00 2.29
3582 3784 6.102615 AGACCCATATAAGTGCCCATTAGAAA 59.897 38.462 0.00 0.00 0.00 2.52
3583 3785 5.610982 AGACCCATATAAGTGCCCATTAGAA 59.389 40.000 0.00 0.00 0.00 2.10
3584 3786 5.162637 AGACCCATATAAGTGCCCATTAGA 58.837 41.667 0.00 0.00 0.00 2.10
3585 3787 5.013079 TGAGACCCATATAAGTGCCCATTAG 59.987 44.000 0.00 0.00 0.00 1.73
3586 3788 4.910913 TGAGACCCATATAAGTGCCCATTA 59.089 41.667 0.00 0.00 0.00 1.90
3587 3789 3.721575 TGAGACCCATATAAGTGCCCATT 59.278 43.478 0.00 0.00 0.00 3.16
3588 3790 3.326521 TGAGACCCATATAAGTGCCCAT 58.673 45.455 0.00 0.00 0.00 4.00
3589 3791 2.705658 CTGAGACCCATATAAGTGCCCA 59.294 50.000 0.00 0.00 0.00 5.36
3590 3792 2.706190 ACTGAGACCCATATAAGTGCCC 59.294 50.000 0.00 0.00 0.00 5.36
3591 3793 4.423625 AACTGAGACCCATATAAGTGCC 57.576 45.455 0.00 0.00 0.00 5.01
3592 3794 4.576463 CCAAACTGAGACCCATATAAGTGC 59.424 45.833 0.00 0.00 0.00 4.40
3593 3795 5.989477 TCCAAACTGAGACCCATATAAGTG 58.011 41.667 0.00 0.00 0.00 3.16
3594 3796 5.396884 GCTCCAAACTGAGACCCATATAAGT 60.397 44.000 0.00 0.00 34.11 2.24
3595 3797 5.059833 GCTCCAAACTGAGACCCATATAAG 58.940 45.833 0.00 0.00 34.11 1.73
3596 3798 4.721776 AGCTCCAAACTGAGACCCATATAA 59.278 41.667 0.00 0.00 34.11 0.98
3597 3799 4.101585 CAGCTCCAAACTGAGACCCATATA 59.898 45.833 0.00 0.00 37.32 0.86
3598 3800 3.118112 CAGCTCCAAACTGAGACCCATAT 60.118 47.826 0.00 0.00 37.32 1.78
3599 3801 2.237143 CAGCTCCAAACTGAGACCCATA 59.763 50.000 0.00 0.00 37.32 2.74
3600 3802 1.004044 CAGCTCCAAACTGAGACCCAT 59.996 52.381 0.00 0.00 37.32 4.00
3601 3803 0.397941 CAGCTCCAAACTGAGACCCA 59.602 55.000 0.00 0.00 37.32 4.51
3602 3804 0.687354 TCAGCTCCAAACTGAGACCC 59.313 55.000 0.00 0.00 39.21 4.46
3603 3805 2.550830 TTCAGCTCCAAACTGAGACC 57.449 50.000 0.00 0.00 44.55 3.85
3604 3806 5.669477 AGATATTCAGCTCCAAACTGAGAC 58.331 41.667 0.00 0.00 44.55 3.36
3605 3807 5.946942 AGATATTCAGCTCCAAACTGAGA 57.053 39.130 0.00 0.00 44.55 3.27
3606 3808 7.044181 TGTTAGATATTCAGCTCCAAACTGAG 58.956 38.462 0.00 0.00 44.55 3.35
3607 3809 6.946340 TGTTAGATATTCAGCTCCAAACTGA 58.054 36.000 0.00 0.00 42.30 3.41
3608 3810 6.820656 ACTGTTAGATATTCAGCTCCAAACTG 59.179 38.462 0.00 0.00 36.44 3.16
3609 3811 6.951971 ACTGTTAGATATTCAGCTCCAAACT 58.048 36.000 0.00 0.00 33.12 2.66
3610 3812 7.119846 ACAACTGTTAGATATTCAGCTCCAAAC 59.880 37.037 0.00 0.00 33.12 2.93
3611 3813 7.168219 ACAACTGTTAGATATTCAGCTCCAAA 58.832 34.615 0.00 0.00 33.12 3.28
3612 3814 6.711277 ACAACTGTTAGATATTCAGCTCCAA 58.289 36.000 0.00 0.00 33.12 3.53
3613 3815 6.299805 ACAACTGTTAGATATTCAGCTCCA 57.700 37.500 0.00 0.00 33.12 3.86
3614 3816 6.037610 CCAACAACTGTTAGATATTCAGCTCC 59.962 42.308 0.00 0.00 36.32 4.70
3615 3817 6.037610 CCCAACAACTGTTAGATATTCAGCTC 59.962 42.308 0.00 0.00 36.32 4.09
3616 3818 5.882557 CCCAACAACTGTTAGATATTCAGCT 59.117 40.000 0.00 0.00 36.32 4.24
3617 3819 5.880332 TCCCAACAACTGTTAGATATTCAGC 59.120 40.000 0.00 0.00 36.32 4.26
3618 3820 7.921786 TTCCCAACAACTGTTAGATATTCAG 57.078 36.000 0.00 0.00 36.32 3.02
3619 3821 7.942341 ACTTTCCCAACAACTGTTAGATATTCA 59.058 33.333 0.00 0.00 36.32 2.57
3620 3822 8.336801 ACTTTCCCAACAACTGTTAGATATTC 57.663 34.615 0.00 0.00 36.32 1.75
3621 3823 8.576442 CAACTTTCCCAACAACTGTTAGATATT 58.424 33.333 0.00 0.00 36.32 1.28
3622 3824 7.724061 ACAACTTTCCCAACAACTGTTAGATAT 59.276 33.333 0.00 0.00 36.32 1.63
3623 3825 7.057894 ACAACTTTCCCAACAACTGTTAGATA 58.942 34.615 0.00 0.00 36.32 1.98
3624 3826 5.891551 ACAACTTTCCCAACAACTGTTAGAT 59.108 36.000 0.00 0.00 36.32 1.98
3625 3827 5.258051 ACAACTTTCCCAACAACTGTTAGA 58.742 37.500 0.00 0.00 36.32 2.10
3626 3828 5.357032 AGACAACTTTCCCAACAACTGTTAG 59.643 40.000 0.00 0.00 36.32 2.34
3627 3829 5.258051 AGACAACTTTCCCAACAACTGTTA 58.742 37.500 0.00 0.00 36.32 2.41
3628 3830 4.086457 AGACAACTTTCCCAACAACTGTT 58.914 39.130 0.00 0.00 39.12 3.16
3629 3831 3.697166 AGACAACTTTCCCAACAACTGT 58.303 40.909 0.00 0.00 0.00 3.55
3630 3832 5.221048 CCTTAGACAACTTTCCCAACAACTG 60.221 44.000 0.00 0.00 0.00 3.16
3631 3833 4.887655 CCTTAGACAACTTTCCCAACAACT 59.112 41.667 0.00 0.00 0.00 3.16
3632 3834 4.499188 GCCTTAGACAACTTTCCCAACAAC 60.499 45.833 0.00 0.00 0.00 3.32
3633 3835 3.634910 GCCTTAGACAACTTTCCCAACAA 59.365 43.478 0.00 0.00 0.00 2.83
3634 3836 3.117663 AGCCTTAGACAACTTTCCCAACA 60.118 43.478 0.00 0.00 0.00 3.33
3635 3837 3.487372 AGCCTTAGACAACTTTCCCAAC 58.513 45.455 0.00 0.00 0.00 3.77
3636 3838 3.876309 AGCCTTAGACAACTTTCCCAA 57.124 42.857 0.00 0.00 0.00 4.12
3637 3839 3.649023 TGTAGCCTTAGACAACTTTCCCA 59.351 43.478 0.00 0.00 0.00 4.37
3638 3840 4.281898 TGTAGCCTTAGACAACTTTCCC 57.718 45.455 0.00 0.00 0.00 3.97
3639 3841 7.769044 TCATTATGTAGCCTTAGACAACTTTCC 59.231 37.037 0.00 0.00 0.00 3.13
3640 3842 8.718102 TCATTATGTAGCCTTAGACAACTTTC 57.282 34.615 0.00 0.00 0.00 2.62
3641 3843 9.515226 TTTCATTATGTAGCCTTAGACAACTTT 57.485 29.630 0.00 0.00 0.00 2.66
3642 3844 9.515226 TTTTCATTATGTAGCCTTAGACAACTT 57.485 29.630 0.00 0.00 0.00 2.66
3643 3845 8.947115 GTTTTCATTATGTAGCCTTAGACAACT 58.053 33.333 0.00 0.00 0.00 3.16
3644 3846 8.947115 AGTTTTCATTATGTAGCCTTAGACAAC 58.053 33.333 0.00 0.00 0.00 3.32
3645 3847 9.515226 AAGTTTTCATTATGTAGCCTTAGACAA 57.485 29.630 0.00 0.00 0.00 3.18
3646 3848 9.162764 GAAGTTTTCATTATGTAGCCTTAGACA 57.837 33.333 0.00 0.00 0.00 3.41
3647 3849 9.162764 TGAAGTTTTCATTATGTAGCCTTAGAC 57.837 33.333 0.00 0.00 34.08 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.