Multiple sequence alignment - TraesCS1B01G209100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G209100 chr1B 100.000 3062 0 0 1 3062 378839943 378836882 0.000000e+00 5655
1 TraesCS1B01G209100 chr1B 93.772 289 18 0 197 485 378854368 378854080 4.690000e-118 435
2 TraesCS1B01G209100 chr1D 97.533 2392 39 6 683 3062 279105020 279102637 0.000000e+00 4072
3 TraesCS1B01G209100 chr1A 96.218 2406 60 10 683 3062 351351010 351348610 0.000000e+00 3910
4 TraesCS1B01G209100 chr2D 82.057 418 66 7 1 414 461300206 461300618 6.280000e-92 348
5 TraesCS1B01G209100 chr6A 80.198 404 67 10 1 399 101361634 101362029 1.070000e-74 291


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G209100 chr1B 378836882 378839943 3061 True 5655 5655 100.000 1 3062 1 chr1B.!!$R1 3061
1 TraesCS1B01G209100 chr1D 279102637 279105020 2383 True 4072 4072 97.533 683 3062 1 chr1D.!!$R1 2379
2 TraesCS1B01G209100 chr1A 351348610 351351010 2400 True 3910 3910 96.218 683 3062 1 chr1A.!!$R1 2379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
189 190 0.034089 AGCCGATTTTGAAGGAGGGG 60.034 55.0 0.0 0.0 0.0 4.79 F
190 191 0.034477 GCCGATTTTGAAGGAGGGGA 60.034 55.0 0.0 0.0 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1781 0.463295 CCTCGTAGTACTCCTCGGCA 60.463 60.000 0.0 0.0 0.00 5.69 R
2163 2186 2.314549 TCCCCATCCTAATTGGTTGCTT 59.685 45.455 0.0 0.0 34.88 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.792736 CCGCCGGGAATCCCAGAA 61.793 66.667 19.81 0.00 45.83 3.02
21 22 2.513897 CGCCGGGAATCCCAGAAC 60.514 66.667 19.81 2.99 45.83 3.01
22 23 2.674754 GCCGGGAATCCCAGAACA 59.325 61.111 19.81 0.00 45.83 3.18
23 24 1.001393 GCCGGGAATCCCAGAACAA 60.001 57.895 19.81 0.00 45.83 2.83
24 25 1.032114 GCCGGGAATCCCAGAACAAG 61.032 60.000 19.81 0.00 45.83 3.16
25 26 0.328258 CCGGGAATCCCAGAACAAGT 59.672 55.000 19.81 0.00 45.83 3.16
26 27 1.453155 CGGGAATCCCAGAACAAGTG 58.547 55.000 19.81 0.00 45.83 3.16
27 28 1.271379 CGGGAATCCCAGAACAAGTGT 60.271 52.381 19.81 0.00 45.83 3.55
28 29 2.814097 CGGGAATCCCAGAACAAGTGTT 60.814 50.000 19.81 0.00 45.83 3.32
29 30 2.558359 GGGAATCCCAGAACAAGTGTTG 59.442 50.000 14.67 0.00 44.65 3.33
30 31 2.558359 GGAATCCCAGAACAAGTGTTGG 59.442 50.000 0.42 0.00 38.56 3.77
31 32 1.620822 ATCCCAGAACAAGTGTTGGC 58.379 50.000 0.42 0.00 38.56 4.52
32 33 0.550914 TCCCAGAACAAGTGTTGGCT 59.449 50.000 0.42 0.00 38.56 4.75
33 34 1.064017 TCCCAGAACAAGTGTTGGCTT 60.064 47.619 0.42 0.00 38.56 4.35
38 39 3.119193 CAAGTGTTGGCTTGCCGT 58.881 55.556 7.18 0.00 39.26 5.68
39 40 1.299316 CAAGTGTTGGCTTGCCGTG 60.299 57.895 7.18 0.00 39.26 4.94
40 41 1.752694 AAGTGTTGGCTTGCCGTGT 60.753 52.632 7.18 0.00 0.00 4.49
41 42 1.724582 AAGTGTTGGCTTGCCGTGTC 61.725 55.000 7.18 0.00 0.00 3.67
42 43 2.124529 TGTTGGCTTGCCGTGTCA 60.125 55.556 7.18 1.18 0.00 3.58
43 44 1.528076 TGTTGGCTTGCCGTGTCAT 60.528 52.632 7.18 0.00 0.00 3.06
44 45 1.210155 GTTGGCTTGCCGTGTCATC 59.790 57.895 7.18 0.00 0.00 2.92
45 46 1.228094 TTGGCTTGCCGTGTCATCA 60.228 52.632 7.18 0.00 0.00 3.07
46 47 1.514678 TTGGCTTGCCGTGTCATCAC 61.515 55.000 7.18 0.00 40.79 3.06
47 48 2.690778 GGCTTGCCGTGTCATCACC 61.691 63.158 0.00 0.00 41.09 4.02
48 49 1.965930 GCTTGCCGTGTCATCACCA 60.966 57.895 0.00 0.00 41.09 4.17
49 50 1.514678 GCTTGCCGTGTCATCACCAA 61.515 55.000 0.00 0.00 41.09 3.67
50 51 0.950836 CTTGCCGTGTCATCACCAAA 59.049 50.000 0.00 0.00 41.09 3.28
51 52 0.950836 TTGCCGTGTCATCACCAAAG 59.049 50.000 0.00 0.00 41.09 2.77
52 53 0.888736 TGCCGTGTCATCACCAAAGG 60.889 55.000 0.00 0.00 41.09 3.11
53 54 1.875963 CCGTGTCATCACCAAAGGC 59.124 57.895 0.00 0.00 41.09 4.35
54 55 1.497278 CGTGTCATCACCAAAGGCG 59.503 57.895 0.00 0.00 41.09 5.52
55 56 1.210155 GTGTCATCACCAAAGGCGC 59.790 57.895 0.00 0.00 38.51 6.53
56 57 1.971167 TGTCATCACCAAAGGCGCC 60.971 57.895 21.89 21.89 0.00 6.53
57 58 2.745884 TCATCACCAAAGGCGCCG 60.746 61.111 23.20 9.47 0.00 6.46
58 59 4.481112 CATCACCAAAGGCGCCGC 62.481 66.667 23.20 0.00 0.00 6.53
72 73 3.437795 CCGCCAAGCTGCCTCAAG 61.438 66.667 0.00 0.00 0.00 3.02
73 74 2.670934 CGCCAAGCTGCCTCAAGT 60.671 61.111 0.00 0.00 0.00 3.16
74 75 2.960170 GCCAAGCTGCCTCAAGTG 59.040 61.111 0.00 0.00 0.00 3.16
75 76 2.960170 CCAAGCTGCCTCAAGTGC 59.040 61.111 0.00 0.00 0.00 4.40
76 77 1.602888 CCAAGCTGCCTCAAGTGCT 60.603 57.895 0.00 0.00 37.37 4.40
77 78 1.579932 CAAGCTGCCTCAAGTGCTG 59.420 57.895 0.00 0.00 35.79 4.41
78 79 0.887836 CAAGCTGCCTCAAGTGCTGA 60.888 55.000 0.00 0.00 35.79 4.26
79 80 0.037877 AAGCTGCCTCAAGTGCTGAT 59.962 50.000 0.00 0.00 35.79 2.90
80 81 0.392729 AGCTGCCTCAAGTGCTGATC 60.393 55.000 0.00 0.00 34.19 2.92
81 82 0.675837 GCTGCCTCAAGTGCTGATCA 60.676 55.000 0.00 0.00 32.14 2.92
82 83 1.817357 CTGCCTCAAGTGCTGATCAA 58.183 50.000 0.00 0.00 32.14 2.57
83 84 1.738350 CTGCCTCAAGTGCTGATCAAG 59.262 52.381 0.00 0.00 32.14 3.02
84 85 1.072806 TGCCTCAAGTGCTGATCAAGT 59.927 47.619 0.00 0.00 32.14 3.16
85 86 1.467734 GCCTCAAGTGCTGATCAAGTG 59.532 52.381 0.00 0.00 32.14 3.16
86 87 2.082231 CCTCAAGTGCTGATCAAGTGG 58.918 52.381 0.00 0.00 32.14 4.00
87 88 2.289882 CCTCAAGTGCTGATCAAGTGGA 60.290 50.000 0.00 0.00 32.14 4.02
88 89 2.740981 CTCAAGTGCTGATCAAGTGGAC 59.259 50.000 0.00 0.00 32.14 4.02
89 90 1.462283 CAAGTGCTGATCAAGTGGACG 59.538 52.381 0.00 0.00 0.00 4.79
90 91 0.036952 AGTGCTGATCAAGTGGACGG 60.037 55.000 0.00 0.00 0.00 4.79
91 92 1.021390 GTGCTGATCAAGTGGACGGG 61.021 60.000 0.00 0.00 0.00 5.28
92 93 2.109126 GCTGATCAAGTGGACGGGC 61.109 63.158 0.00 0.00 0.00 6.13
93 94 1.450312 CTGATCAAGTGGACGGGCC 60.450 63.158 0.00 0.00 37.10 5.80
94 95 2.184020 CTGATCAAGTGGACGGGCCA 62.184 60.000 4.39 0.00 46.96 5.36
117 118 2.819595 CCTCGTTGGCGTCATGGG 60.820 66.667 0.00 0.00 39.49 4.00
118 119 2.264480 CTCGTTGGCGTCATGGGA 59.736 61.111 0.00 0.00 39.49 4.37
119 120 1.153369 CTCGTTGGCGTCATGGGAT 60.153 57.895 0.00 0.00 39.49 3.85
120 121 1.431488 CTCGTTGGCGTCATGGGATG 61.431 60.000 0.00 0.00 39.49 3.51
121 122 1.449423 CGTTGGCGTCATGGGATGA 60.449 57.895 0.00 0.00 36.84 2.92
132 133 2.362397 TCATGGGATGACTACTTCGAGC 59.638 50.000 0.00 0.00 33.59 5.03
133 134 2.145397 TGGGATGACTACTTCGAGCT 57.855 50.000 0.00 0.00 0.00 4.09
134 135 1.751351 TGGGATGACTACTTCGAGCTG 59.249 52.381 0.00 0.00 0.00 4.24
135 136 1.537135 GGGATGACTACTTCGAGCTGC 60.537 57.143 0.00 0.00 0.00 5.25
136 137 1.471964 GATGACTACTTCGAGCTGCG 58.528 55.000 0.00 0.00 42.69 5.18
137 138 0.526524 ATGACTACTTCGAGCTGCGC 60.527 55.000 0.00 0.00 40.61 6.09
138 139 1.154016 GACTACTTCGAGCTGCGCA 60.154 57.895 10.98 10.98 40.61 6.09
139 140 1.136872 GACTACTTCGAGCTGCGCAG 61.137 60.000 32.83 32.83 39.23 5.18
141 142 1.136872 CTACTTCGAGCTGCGCAGTC 61.137 60.000 35.80 28.08 42.78 3.51
142 143 2.850786 TACTTCGAGCTGCGCAGTCG 62.851 60.000 35.42 35.42 42.78 4.18
152 153 4.379243 CGCAGTCGCTTCCCAGGT 62.379 66.667 0.00 0.00 35.30 4.00
153 154 2.743928 GCAGTCGCTTCCCAGGTG 60.744 66.667 0.00 0.00 34.30 4.00
154 155 2.743928 CAGTCGCTTCCCAGGTGC 60.744 66.667 0.00 0.00 0.00 5.01
155 156 2.925170 AGTCGCTTCCCAGGTGCT 60.925 61.111 0.00 0.00 0.00 4.40
156 157 2.743928 GTCGCTTCCCAGGTGCTG 60.744 66.667 0.00 0.00 0.00 4.41
157 158 4.704833 TCGCTTCCCAGGTGCTGC 62.705 66.667 0.00 0.00 0.00 5.25
163 164 4.408821 CCCAGGTGCTGCGGCTTA 62.409 66.667 20.27 0.00 39.59 3.09
164 165 2.821366 CCAGGTGCTGCGGCTTAG 60.821 66.667 20.27 5.98 39.59 2.18
165 166 2.821366 CAGGTGCTGCGGCTTAGG 60.821 66.667 20.27 2.12 39.59 2.69
166 167 4.101448 AGGTGCTGCGGCTTAGGG 62.101 66.667 20.27 0.00 39.59 3.53
167 168 4.096003 GGTGCTGCGGCTTAGGGA 62.096 66.667 20.27 0.00 39.59 4.20
168 169 2.820037 GTGCTGCGGCTTAGGGAC 60.820 66.667 20.27 3.05 39.59 4.46
169 170 3.318384 TGCTGCGGCTTAGGGACA 61.318 61.111 20.27 0.00 39.59 4.02
170 171 2.046314 GCTGCGGCTTAGGGACAA 60.046 61.111 11.21 0.00 35.22 3.18
171 172 2.109126 GCTGCGGCTTAGGGACAAG 61.109 63.158 11.21 0.00 35.22 3.16
177 178 3.478540 GCTTAGGGACAAGCCGATT 57.521 52.632 0.00 0.00 44.22 3.34
178 179 1.751437 GCTTAGGGACAAGCCGATTT 58.249 50.000 0.00 0.00 44.22 2.17
179 180 2.092323 GCTTAGGGACAAGCCGATTTT 58.908 47.619 0.00 0.00 44.22 1.82
180 181 2.159379 GCTTAGGGACAAGCCGATTTTG 60.159 50.000 0.00 0.00 44.22 2.44
181 182 3.343617 CTTAGGGACAAGCCGATTTTGA 58.656 45.455 0.00 0.00 37.63 2.69
182 183 2.286365 AGGGACAAGCCGATTTTGAA 57.714 45.000 0.00 0.00 37.63 2.69
183 184 2.162681 AGGGACAAGCCGATTTTGAAG 58.837 47.619 0.00 0.00 37.63 3.02
184 185 1.202348 GGGACAAGCCGATTTTGAAGG 59.798 52.381 0.00 0.00 37.63 3.46
185 186 2.159382 GGACAAGCCGATTTTGAAGGA 58.841 47.619 0.00 0.00 0.00 3.36
186 187 2.162408 GGACAAGCCGATTTTGAAGGAG 59.838 50.000 0.00 0.00 0.00 3.69
187 188 2.162408 GACAAGCCGATTTTGAAGGAGG 59.838 50.000 0.00 0.00 0.00 4.30
188 189 1.474077 CAAGCCGATTTTGAAGGAGGG 59.526 52.381 0.00 0.00 0.00 4.30
189 190 0.034089 AGCCGATTTTGAAGGAGGGG 60.034 55.000 0.00 0.00 0.00 4.79
190 191 0.034477 GCCGATTTTGAAGGAGGGGA 60.034 55.000 0.00 0.00 0.00 4.81
191 192 2.019156 GCCGATTTTGAAGGAGGGGAG 61.019 57.143 0.00 0.00 0.00 4.30
192 193 1.559682 CCGATTTTGAAGGAGGGGAGA 59.440 52.381 0.00 0.00 0.00 3.71
193 194 2.026262 CCGATTTTGAAGGAGGGGAGAA 60.026 50.000 0.00 0.00 0.00 2.87
194 195 3.372025 CCGATTTTGAAGGAGGGGAGAAT 60.372 47.826 0.00 0.00 0.00 2.40
195 196 3.629398 CGATTTTGAAGGAGGGGAGAATG 59.371 47.826 0.00 0.00 0.00 2.67
196 197 4.604156 GATTTTGAAGGAGGGGAGAATGT 58.396 43.478 0.00 0.00 0.00 2.71
197 198 3.721087 TTTGAAGGAGGGGAGAATGTC 57.279 47.619 0.00 0.00 0.00 3.06
198 199 2.342406 TGAAGGAGGGGAGAATGTCA 57.658 50.000 0.00 0.00 0.00 3.58
199 200 1.909302 TGAAGGAGGGGAGAATGTCAC 59.091 52.381 0.00 0.00 0.00 3.67
200 201 0.905357 AAGGAGGGGAGAATGTCACG 59.095 55.000 0.00 0.00 0.00 4.35
201 202 0.978146 AGGAGGGGAGAATGTCACGG 60.978 60.000 0.00 0.00 0.00 4.94
202 203 1.522569 GAGGGGAGAATGTCACGGG 59.477 63.158 0.00 0.00 0.00 5.28
203 204 2.124695 GGGGAGAATGTCACGGGC 60.125 66.667 0.00 0.00 0.00 6.13
204 205 2.668632 GGGAGAATGTCACGGGCA 59.331 61.111 0.00 0.00 0.00 5.36
205 206 1.745489 GGGAGAATGTCACGGGCAC 60.745 63.158 0.00 0.00 0.00 5.01
206 207 1.003839 GGAGAATGTCACGGGCACA 60.004 57.895 0.00 0.00 0.00 4.57
207 208 0.605319 GGAGAATGTCACGGGCACAA 60.605 55.000 0.00 0.00 0.00 3.33
208 209 0.798776 GAGAATGTCACGGGCACAAG 59.201 55.000 0.00 0.00 0.00 3.16
209 210 0.108585 AGAATGTCACGGGCACAAGT 59.891 50.000 0.00 0.00 0.00 3.16
210 211 1.346395 AGAATGTCACGGGCACAAGTA 59.654 47.619 0.00 0.00 0.00 2.24
211 212 1.463444 GAATGTCACGGGCACAAGTAC 59.537 52.381 0.00 0.00 0.00 2.73
212 213 0.321298 ATGTCACGGGCACAAGTACC 60.321 55.000 0.00 0.00 0.00 3.34
213 214 1.370064 GTCACGGGCACAAGTACCT 59.630 57.895 0.00 0.00 0.00 3.08
214 215 0.669625 GTCACGGGCACAAGTACCTC 60.670 60.000 0.00 0.00 0.00 3.85
215 216 0.830444 TCACGGGCACAAGTACCTCT 60.830 55.000 0.00 0.00 0.00 3.69
216 217 0.892755 CACGGGCACAAGTACCTCTA 59.107 55.000 0.00 0.00 0.00 2.43
217 218 0.893447 ACGGGCACAAGTACCTCTAC 59.107 55.000 0.00 0.00 0.00 2.59
218 219 0.892755 CGGGCACAAGTACCTCTACA 59.107 55.000 0.00 0.00 0.00 2.74
219 220 1.274167 CGGGCACAAGTACCTCTACAA 59.726 52.381 0.00 0.00 0.00 2.41
220 221 2.696506 GGGCACAAGTACCTCTACAAC 58.303 52.381 0.00 0.00 0.00 3.32
221 222 2.334838 GGCACAAGTACCTCTACAACG 58.665 52.381 0.00 0.00 0.00 4.10
222 223 1.725164 GCACAAGTACCTCTACAACGC 59.275 52.381 0.00 0.00 0.00 4.84
223 224 2.864882 GCACAAGTACCTCTACAACGCA 60.865 50.000 0.00 0.00 0.00 5.24
224 225 2.729882 CACAAGTACCTCTACAACGCAC 59.270 50.000 0.00 0.00 0.00 5.34
225 226 1.983605 CAAGTACCTCTACAACGCACG 59.016 52.381 0.00 0.00 0.00 5.34
226 227 0.524862 AGTACCTCTACAACGCACGG 59.475 55.000 0.00 0.00 0.00 4.94
227 228 1.074872 GTACCTCTACAACGCACGGC 61.075 60.000 0.00 0.00 0.00 5.68
228 229 1.525718 TACCTCTACAACGCACGGCA 61.526 55.000 0.00 0.00 0.00 5.69
229 230 1.666553 CCTCTACAACGCACGGCAA 60.667 57.895 0.00 0.00 0.00 4.52
230 231 1.019278 CCTCTACAACGCACGGCAAT 61.019 55.000 0.00 0.00 0.00 3.56
231 232 0.095245 CTCTACAACGCACGGCAATG 59.905 55.000 0.00 0.00 0.00 2.82
232 233 0.319986 TCTACAACGCACGGCAATGA 60.320 50.000 0.00 0.00 0.00 2.57
233 234 0.095245 CTACAACGCACGGCAATGAG 59.905 55.000 0.00 0.00 0.00 2.90
234 235 1.295357 TACAACGCACGGCAATGAGG 61.295 55.000 0.00 0.00 0.00 3.86
235 236 2.031919 AACGCACGGCAATGAGGA 59.968 55.556 0.00 0.00 0.00 3.71
236 237 2.034879 AACGCACGGCAATGAGGAG 61.035 57.895 0.00 0.00 0.00 3.69
237 238 3.197790 CGCACGGCAATGAGGAGG 61.198 66.667 0.00 0.00 0.00 4.30
238 239 2.825836 GCACGGCAATGAGGAGGG 60.826 66.667 0.00 0.00 0.00 4.30
239 240 2.825836 CACGGCAATGAGGAGGGC 60.826 66.667 0.00 0.00 0.00 5.19
240 241 4.115199 ACGGCAATGAGGAGGGCC 62.115 66.667 0.00 0.00 42.98 5.80
242 243 3.797353 GGCAATGAGGAGGGCCGA 61.797 66.667 0.00 0.00 39.96 5.54
243 244 2.514824 GCAATGAGGAGGGCCGAC 60.515 66.667 0.00 0.00 39.96 4.79
244 245 2.190578 CAATGAGGAGGGCCGACC 59.809 66.667 13.52 13.52 39.96 4.79
254 255 2.269241 GGCCGACCCAAGAGGAAG 59.731 66.667 0.00 0.00 39.89 3.46
255 256 2.291043 GGCCGACCCAAGAGGAAGA 61.291 63.158 0.00 0.00 39.89 2.87
256 257 1.219393 GCCGACCCAAGAGGAAGAG 59.781 63.158 0.00 0.00 39.89 2.85
257 258 1.258445 GCCGACCCAAGAGGAAGAGA 61.258 60.000 0.00 0.00 39.89 3.10
258 259 0.533032 CCGACCCAAGAGGAAGAGAC 59.467 60.000 0.00 0.00 39.89 3.36
259 260 0.171455 CGACCCAAGAGGAAGAGACG 59.829 60.000 0.00 0.00 39.89 4.18
260 261 0.533032 GACCCAAGAGGAAGAGACGG 59.467 60.000 0.00 0.00 39.89 4.79
261 262 1.219393 CCCAAGAGGAAGAGACGGC 59.781 63.158 0.00 0.00 38.24 5.68
262 263 1.219393 CCAAGAGGAAGAGACGGCC 59.781 63.158 0.00 0.00 36.89 6.13
263 264 1.219393 CAAGAGGAAGAGACGGCCC 59.781 63.158 0.00 0.00 0.00 5.80
264 265 2.352032 AAGAGGAAGAGACGGCCCG 61.352 63.158 0.00 0.00 0.00 6.13
265 266 3.839432 GAGGAAGAGACGGCCCGG 61.839 72.222 8.57 0.00 0.00 5.73
266 267 4.698625 AGGAAGAGACGGCCCGGT 62.699 66.667 8.57 0.00 0.00 5.28
267 268 4.144703 GGAAGAGACGGCCCGGTC 62.145 72.222 8.57 3.51 37.19 4.79
268 269 3.379445 GAAGAGACGGCCCGGTCA 61.379 66.667 8.57 0.00 39.42 4.02
269 270 3.644399 GAAGAGACGGCCCGGTCAC 62.644 68.421 8.57 6.80 39.42 3.67
270 271 4.988716 AGAGACGGCCCGGTCACA 62.989 66.667 8.57 0.00 39.42 3.58
271 272 3.998672 GAGACGGCCCGGTCACAA 61.999 66.667 8.57 0.00 39.42 3.33
272 273 3.934391 GAGACGGCCCGGTCACAAG 62.934 68.421 8.57 0.00 39.42 3.16
273 274 4.309950 GACGGCCCGGTCACAAGT 62.310 66.667 8.57 0.00 36.91 3.16
274 275 3.819877 GACGGCCCGGTCACAAGTT 62.820 63.158 8.57 0.00 36.91 2.66
275 276 2.593436 CGGCCCGGTCACAAGTTT 60.593 61.111 0.00 0.00 0.00 2.66
276 277 2.903547 CGGCCCGGTCACAAGTTTG 61.904 63.158 0.00 0.00 0.00 2.93
277 278 1.527380 GGCCCGGTCACAAGTTTGA 60.527 57.895 0.00 0.00 0.00 2.69
278 279 1.652563 GCCCGGTCACAAGTTTGAC 59.347 57.895 0.00 8.72 44.53 3.18
284 285 1.388547 GTCACAAGTTTGACCCAGCA 58.611 50.000 0.00 0.00 40.15 4.41
285 286 1.065551 GTCACAAGTTTGACCCAGCAC 59.934 52.381 0.00 0.00 40.15 4.40
286 287 0.385390 CACAAGTTTGACCCAGCACC 59.615 55.000 0.00 0.00 0.00 5.01
287 288 0.755327 ACAAGTTTGACCCAGCACCC 60.755 55.000 0.00 0.00 0.00 4.61
288 289 0.468029 CAAGTTTGACCCAGCACCCT 60.468 55.000 0.00 0.00 0.00 4.34
289 290 0.468029 AAGTTTGACCCAGCACCCTG 60.468 55.000 0.00 0.00 38.85 4.45
299 300 2.442236 CAGCACCCTGGGAATTATGT 57.558 50.000 22.23 0.00 35.38 2.29
300 301 2.026641 CAGCACCCTGGGAATTATGTG 58.973 52.381 22.23 6.29 35.38 3.21
301 302 1.063717 AGCACCCTGGGAATTATGTGG 60.064 52.381 22.23 0.00 0.00 4.17
302 303 1.064017 GCACCCTGGGAATTATGTGGA 60.064 52.381 22.23 0.00 0.00 4.02
303 304 2.424812 GCACCCTGGGAATTATGTGGAT 60.425 50.000 22.23 0.00 0.00 3.41
304 305 3.181434 GCACCCTGGGAATTATGTGGATA 60.181 47.826 22.23 0.00 0.00 2.59
305 306 4.691376 GCACCCTGGGAATTATGTGGATAA 60.691 45.833 22.23 0.00 0.00 1.75
306 307 5.072741 CACCCTGGGAATTATGTGGATAAG 58.927 45.833 22.23 0.00 0.00 1.73
307 308 4.731929 ACCCTGGGAATTATGTGGATAAGT 59.268 41.667 22.23 0.00 0.00 2.24
308 309 5.072741 CCCTGGGAATTATGTGGATAAGTG 58.927 45.833 7.01 0.00 0.00 3.16
309 310 5.399038 CCCTGGGAATTATGTGGATAAGTGT 60.399 44.000 7.01 0.00 0.00 3.55
310 311 6.183361 CCCTGGGAATTATGTGGATAAGTGTA 60.183 42.308 7.01 0.00 0.00 2.90
311 312 6.936900 CCTGGGAATTATGTGGATAAGTGTAG 59.063 42.308 0.00 0.00 0.00 2.74
312 313 6.837312 TGGGAATTATGTGGATAAGTGTAGG 58.163 40.000 0.00 0.00 0.00 3.18
313 314 6.388689 TGGGAATTATGTGGATAAGTGTAGGT 59.611 38.462 0.00 0.00 0.00 3.08
314 315 6.710744 GGGAATTATGTGGATAAGTGTAGGTG 59.289 42.308 0.00 0.00 0.00 4.00
315 316 7.280356 GGAATTATGTGGATAAGTGTAGGTGT 58.720 38.462 0.00 0.00 0.00 4.16
316 317 7.226720 GGAATTATGTGGATAAGTGTAGGTGTG 59.773 40.741 0.00 0.00 0.00 3.82
317 318 3.328382 TGTGGATAAGTGTAGGTGTGC 57.672 47.619 0.00 0.00 0.00 4.57
318 319 2.268298 GTGGATAAGTGTAGGTGTGCG 58.732 52.381 0.00 0.00 0.00 5.34
319 320 1.897133 TGGATAAGTGTAGGTGTGCGT 59.103 47.619 0.00 0.00 0.00 5.24
320 321 2.268298 GGATAAGTGTAGGTGTGCGTG 58.732 52.381 0.00 0.00 0.00 5.34
321 322 2.353406 GGATAAGTGTAGGTGTGCGTGT 60.353 50.000 0.00 0.00 0.00 4.49
322 323 2.143008 TAAGTGTAGGTGTGCGTGTG 57.857 50.000 0.00 0.00 0.00 3.82
323 324 0.531974 AAGTGTAGGTGTGCGTGTGG 60.532 55.000 0.00 0.00 0.00 4.17
324 325 1.959226 GTGTAGGTGTGCGTGTGGG 60.959 63.158 0.00 0.00 0.00 4.61
325 326 2.424302 GTAGGTGTGCGTGTGGGT 59.576 61.111 0.00 0.00 0.00 4.51
326 327 1.959226 GTAGGTGTGCGTGTGGGTG 60.959 63.158 0.00 0.00 0.00 4.61
327 328 2.134933 TAGGTGTGCGTGTGGGTGA 61.135 57.895 0.00 0.00 0.00 4.02
328 329 1.687297 TAGGTGTGCGTGTGGGTGAA 61.687 55.000 0.00 0.00 0.00 3.18
329 330 2.115911 GGTGTGCGTGTGGGTGAAA 61.116 57.895 0.00 0.00 0.00 2.69
330 331 1.355210 GTGTGCGTGTGGGTGAAAG 59.645 57.895 0.00 0.00 0.00 2.62
331 332 1.821759 TGTGCGTGTGGGTGAAAGG 60.822 57.895 0.00 0.00 0.00 3.11
332 333 2.203280 TGCGTGTGGGTGAAAGGG 60.203 61.111 0.00 0.00 0.00 3.95
333 334 3.670377 GCGTGTGGGTGAAAGGGC 61.670 66.667 0.00 0.00 0.00 5.19
334 335 2.203280 CGTGTGGGTGAAAGGGCA 60.203 61.111 0.00 0.00 0.00 5.36
335 336 1.603455 CGTGTGGGTGAAAGGGCAT 60.603 57.895 0.00 0.00 0.00 4.40
336 337 1.586154 CGTGTGGGTGAAAGGGCATC 61.586 60.000 0.00 0.00 0.00 3.91
337 338 1.303236 TGTGGGTGAAAGGGCATCG 60.303 57.895 0.00 0.00 0.00 3.84
338 339 1.002624 GTGGGTGAAAGGGCATCGA 60.003 57.895 0.00 0.00 0.00 3.59
339 340 1.026718 GTGGGTGAAAGGGCATCGAG 61.027 60.000 0.00 0.00 0.00 4.04
340 341 1.198094 TGGGTGAAAGGGCATCGAGA 61.198 55.000 0.00 0.00 0.00 4.04
341 342 0.462759 GGGTGAAAGGGCATCGAGAG 60.463 60.000 0.00 0.00 0.00 3.20
354 355 0.537188 TCGAGAGAATTGCCTGGACC 59.463 55.000 0.00 0.00 37.03 4.46
355 356 0.539051 CGAGAGAATTGCCTGGACCT 59.461 55.000 0.00 0.00 0.00 3.85
356 357 1.741732 CGAGAGAATTGCCTGGACCTG 60.742 57.143 0.00 0.00 0.00 4.00
357 358 1.280421 GAGAGAATTGCCTGGACCTGT 59.720 52.381 0.00 0.00 0.00 4.00
358 359 2.501723 GAGAGAATTGCCTGGACCTGTA 59.498 50.000 0.00 0.00 0.00 2.74
359 360 2.237392 AGAGAATTGCCTGGACCTGTAC 59.763 50.000 0.00 0.00 0.00 2.90
360 361 2.237392 GAGAATTGCCTGGACCTGTACT 59.763 50.000 0.00 0.00 0.00 2.73
361 362 2.237392 AGAATTGCCTGGACCTGTACTC 59.763 50.000 0.00 0.00 0.00 2.59
362 363 0.912486 ATTGCCTGGACCTGTACTCC 59.088 55.000 0.00 0.00 0.00 3.85
363 364 0.178903 TTGCCTGGACCTGTACTCCT 60.179 55.000 0.00 0.00 0.00 3.69
364 365 0.178903 TGCCTGGACCTGTACTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
365 366 0.537653 GCCTGGACCTGTACTCCTTC 59.462 60.000 0.00 0.00 0.00 3.46
366 367 1.196012 CCTGGACCTGTACTCCTTCC 58.804 60.000 0.00 0.00 0.00 3.46
367 368 1.273324 CCTGGACCTGTACTCCTTCCT 60.273 57.143 0.00 0.00 0.00 3.36
368 369 1.827969 CTGGACCTGTACTCCTTCCTG 59.172 57.143 0.00 0.00 0.00 3.86
369 370 1.196012 GGACCTGTACTCCTTCCTGG 58.804 60.000 0.00 0.00 37.10 4.45
370 371 1.552719 GGACCTGTACTCCTTCCTGGT 60.553 57.143 0.00 0.00 37.07 4.00
371 372 1.826096 GACCTGTACTCCTTCCTGGTC 59.174 57.143 0.00 0.00 39.15 4.02
372 373 1.196012 CCTGTACTCCTTCCTGGTCC 58.804 60.000 0.00 0.00 37.07 4.46
373 374 1.196012 CTGTACTCCTTCCTGGTCCC 58.804 60.000 0.00 0.00 37.07 4.46
374 375 0.252558 TGTACTCCTTCCTGGTCCCC 60.253 60.000 0.00 0.00 37.07 4.81
375 376 0.042881 GTACTCCTTCCTGGTCCCCT 59.957 60.000 0.00 0.00 37.07 4.79
376 377 0.797579 TACTCCTTCCTGGTCCCCTT 59.202 55.000 0.00 0.00 37.07 3.95
377 378 0.547954 ACTCCTTCCTGGTCCCCTTC 60.548 60.000 0.00 0.00 37.07 3.46
378 379 0.252927 CTCCTTCCTGGTCCCCTTCT 60.253 60.000 0.00 0.00 37.07 2.85
379 380 0.196118 TCCTTCCTGGTCCCCTTCTT 59.804 55.000 0.00 0.00 37.07 2.52
380 381 0.621082 CCTTCCTGGTCCCCTTCTTC 59.379 60.000 0.00 0.00 0.00 2.87
381 382 0.621082 CTTCCTGGTCCCCTTCTTCC 59.379 60.000 0.00 0.00 0.00 3.46
382 383 0.196118 TTCCTGGTCCCCTTCTTCCT 59.804 55.000 0.00 0.00 0.00 3.36
383 384 0.252742 TCCTGGTCCCCTTCTTCCTC 60.253 60.000 0.00 0.00 0.00 3.71
384 385 0.252927 CCTGGTCCCCTTCTTCCTCT 60.253 60.000 0.00 0.00 0.00 3.69
385 386 1.199615 CTGGTCCCCTTCTTCCTCTC 58.800 60.000 0.00 0.00 0.00 3.20
386 387 0.793617 TGGTCCCCTTCTTCCTCTCT 59.206 55.000 0.00 0.00 0.00 3.10
387 388 1.199615 GGTCCCCTTCTTCCTCTCTG 58.800 60.000 0.00 0.00 0.00 3.35
388 389 1.273324 GGTCCCCTTCTTCCTCTCTGA 60.273 57.143 0.00 0.00 0.00 3.27
389 390 2.541466 GTCCCCTTCTTCCTCTCTGAA 58.459 52.381 0.00 0.00 0.00 3.02
390 391 2.235155 GTCCCCTTCTTCCTCTCTGAAC 59.765 54.545 0.00 0.00 0.00 3.18
391 392 2.112691 TCCCCTTCTTCCTCTCTGAACT 59.887 50.000 0.00 0.00 0.00 3.01
392 393 2.499693 CCCCTTCTTCCTCTCTGAACTC 59.500 54.545 0.00 0.00 0.00 3.01
393 394 3.440127 CCCTTCTTCCTCTCTGAACTCT 58.560 50.000 0.00 0.00 0.00 3.24
394 395 3.447229 CCCTTCTTCCTCTCTGAACTCTC 59.553 52.174 0.00 0.00 0.00 3.20
395 396 4.344104 CCTTCTTCCTCTCTGAACTCTCT 58.656 47.826 0.00 0.00 0.00 3.10
396 397 4.399303 CCTTCTTCCTCTCTGAACTCTCTC 59.601 50.000 0.00 0.00 0.00 3.20
397 398 4.927267 TCTTCCTCTCTGAACTCTCTCT 57.073 45.455 0.00 0.00 0.00 3.10
398 399 4.843728 TCTTCCTCTCTGAACTCTCTCTC 58.156 47.826 0.00 0.00 0.00 3.20
399 400 4.536090 TCTTCCTCTCTGAACTCTCTCTCT 59.464 45.833 0.00 0.00 0.00 3.10
400 401 4.487714 TCCTCTCTGAACTCTCTCTCTC 57.512 50.000 0.00 0.00 0.00 3.20
401 402 3.199946 TCCTCTCTGAACTCTCTCTCTCC 59.800 52.174 0.00 0.00 0.00 3.71
402 403 3.545703 CTCTCTGAACTCTCTCTCTCCC 58.454 54.545 0.00 0.00 0.00 4.30
403 404 3.189606 TCTCTGAACTCTCTCTCTCCCT 58.810 50.000 0.00 0.00 0.00 4.20
404 405 3.054434 TCTCTGAACTCTCTCTCTCCCTG 60.054 52.174 0.00 0.00 0.00 4.45
405 406 1.750778 CTGAACTCTCTCTCTCCCTGC 59.249 57.143 0.00 0.00 0.00 4.85
406 407 1.357420 TGAACTCTCTCTCTCCCTGCT 59.643 52.381 0.00 0.00 0.00 4.24
407 408 2.225242 TGAACTCTCTCTCTCCCTGCTT 60.225 50.000 0.00 0.00 0.00 3.91
408 409 2.143876 ACTCTCTCTCTCCCTGCTTC 57.856 55.000 0.00 0.00 0.00 3.86
409 410 1.357420 ACTCTCTCTCTCCCTGCTTCA 59.643 52.381 0.00 0.00 0.00 3.02
410 411 2.225242 ACTCTCTCTCTCCCTGCTTCAA 60.225 50.000 0.00 0.00 0.00 2.69
411 412 3.033184 CTCTCTCTCTCCCTGCTTCAAT 58.967 50.000 0.00 0.00 0.00 2.57
412 413 3.448934 TCTCTCTCTCCCTGCTTCAATT 58.551 45.455 0.00 0.00 0.00 2.32
413 414 3.450457 TCTCTCTCTCCCTGCTTCAATTC 59.550 47.826 0.00 0.00 0.00 2.17
414 415 2.167281 TCTCTCTCCCTGCTTCAATTCG 59.833 50.000 0.00 0.00 0.00 3.34
415 416 1.012841 CTCTCCCTGCTTCAATTCGC 58.987 55.000 0.00 0.00 0.00 4.70
416 417 0.392998 TCTCCCTGCTTCAATTCGCC 60.393 55.000 0.00 0.00 0.00 5.54
417 418 0.393537 CTCCCTGCTTCAATTCGCCT 60.394 55.000 0.00 0.00 0.00 5.52
418 419 0.392998 TCCCTGCTTCAATTCGCCTC 60.393 55.000 0.00 0.00 0.00 4.70
419 420 1.379642 CCCTGCTTCAATTCGCCTCC 61.380 60.000 0.00 0.00 0.00 4.30
420 421 0.393537 CCTGCTTCAATTCGCCTCCT 60.394 55.000 0.00 0.00 0.00 3.69
421 422 1.134401 CCTGCTTCAATTCGCCTCCTA 60.134 52.381 0.00 0.00 0.00 2.94
422 423 2.632377 CTGCTTCAATTCGCCTCCTAA 58.368 47.619 0.00 0.00 0.00 2.69
423 424 3.009723 CTGCTTCAATTCGCCTCCTAAA 58.990 45.455 0.00 0.00 0.00 1.85
424 425 3.620488 TGCTTCAATTCGCCTCCTAAAT 58.380 40.909 0.00 0.00 0.00 1.40
425 426 3.627577 TGCTTCAATTCGCCTCCTAAATC 59.372 43.478 0.00 0.00 0.00 2.17
426 427 3.627577 GCTTCAATTCGCCTCCTAAATCA 59.372 43.478 0.00 0.00 0.00 2.57
427 428 4.496507 GCTTCAATTCGCCTCCTAAATCAC 60.497 45.833 0.00 0.00 0.00 3.06
428 429 3.541632 TCAATTCGCCTCCTAAATCACC 58.458 45.455 0.00 0.00 0.00 4.02
429 430 3.054728 TCAATTCGCCTCCTAAATCACCA 60.055 43.478 0.00 0.00 0.00 4.17
430 431 3.644966 ATTCGCCTCCTAAATCACCAA 57.355 42.857 0.00 0.00 0.00 3.67
431 432 3.644966 TTCGCCTCCTAAATCACCAAT 57.355 42.857 0.00 0.00 0.00 3.16
432 433 3.644966 TCGCCTCCTAAATCACCAATT 57.355 42.857 0.00 0.00 0.00 2.32
433 434 3.963129 TCGCCTCCTAAATCACCAATTT 58.037 40.909 0.00 0.00 40.67 1.82
434 435 3.945285 TCGCCTCCTAAATCACCAATTTC 59.055 43.478 0.00 0.00 38.53 2.17
435 436 3.947834 CGCCTCCTAAATCACCAATTTCT 59.052 43.478 0.00 0.00 38.53 2.52
436 437 4.035675 CGCCTCCTAAATCACCAATTTCTC 59.964 45.833 0.00 0.00 38.53 2.87
437 438 4.339530 GCCTCCTAAATCACCAATTTCTCC 59.660 45.833 0.00 0.00 38.53 3.71
438 439 4.889995 CCTCCTAAATCACCAATTTCTCCC 59.110 45.833 0.00 0.00 38.53 4.30
439 440 5.340360 CCTCCTAAATCACCAATTTCTCCCT 60.340 44.000 0.00 0.00 38.53 4.20
440 441 5.509498 TCCTAAATCACCAATTTCTCCCTG 58.491 41.667 0.00 0.00 38.53 4.45
441 442 5.015178 TCCTAAATCACCAATTTCTCCCTGT 59.985 40.000 0.00 0.00 38.53 4.00
442 443 6.216662 TCCTAAATCACCAATTTCTCCCTGTA 59.783 38.462 0.00 0.00 38.53 2.74
443 444 7.062957 CCTAAATCACCAATTTCTCCCTGTAT 58.937 38.462 0.00 0.00 38.53 2.29
444 445 7.229506 CCTAAATCACCAATTTCTCCCTGTATC 59.770 40.741 0.00 0.00 38.53 2.24
445 446 4.137116 TCACCAATTTCTCCCTGTATCG 57.863 45.455 0.00 0.00 0.00 2.92
446 447 2.614057 CACCAATTTCTCCCTGTATCGC 59.386 50.000 0.00 0.00 0.00 4.58
447 448 2.222027 CCAATTTCTCCCTGTATCGCC 58.778 52.381 0.00 0.00 0.00 5.54
448 449 2.421388 CCAATTTCTCCCTGTATCGCCA 60.421 50.000 0.00 0.00 0.00 5.69
449 450 3.480470 CAATTTCTCCCTGTATCGCCAT 58.520 45.455 0.00 0.00 0.00 4.40
450 451 2.620251 TTTCTCCCTGTATCGCCATG 57.380 50.000 0.00 0.00 0.00 3.66
451 452 0.758734 TTCTCCCTGTATCGCCATGG 59.241 55.000 7.63 7.63 0.00 3.66
452 453 0.105709 TCTCCCTGTATCGCCATGGA 60.106 55.000 18.40 0.00 0.00 3.41
453 454 0.979665 CTCCCTGTATCGCCATGGAT 59.020 55.000 18.40 3.10 30.15 3.41
454 455 1.349026 CTCCCTGTATCGCCATGGATT 59.651 52.381 18.40 0.79 30.15 3.01
455 456 1.347707 TCCCTGTATCGCCATGGATTC 59.652 52.381 18.40 0.00 0.00 2.52
456 457 1.432514 CCTGTATCGCCATGGATTCG 58.567 55.000 18.40 10.19 0.00 3.34
457 458 1.000843 CCTGTATCGCCATGGATTCGA 59.999 52.381 18.40 15.87 36.63 3.71
458 459 2.332104 CTGTATCGCCATGGATTCGAG 58.668 52.381 18.40 0.00 35.61 4.04
459 460 1.960689 TGTATCGCCATGGATTCGAGA 59.039 47.619 18.40 9.85 35.61 4.04
460 461 2.288213 TGTATCGCCATGGATTCGAGAC 60.288 50.000 23.02 23.02 42.56 3.36
461 462 0.752658 ATCGCCATGGATTCGAGACA 59.247 50.000 18.40 0.00 35.61 3.41
462 463 0.534873 TCGCCATGGATTCGAGACAA 59.465 50.000 18.40 0.00 0.00 3.18
463 464 1.138859 TCGCCATGGATTCGAGACAAT 59.861 47.619 18.40 0.00 0.00 2.71
464 465 2.364002 TCGCCATGGATTCGAGACAATA 59.636 45.455 18.40 0.00 0.00 1.90
465 466 2.733552 CGCCATGGATTCGAGACAATAG 59.266 50.000 18.40 0.00 0.00 1.73
466 467 3.552890 CGCCATGGATTCGAGACAATAGA 60.553 47.826 18.40 0.00 0.00 1.98
467 468 4.380531 GCCATGGATTCGAGACAATAGAA 58.619 43.478 18.40 0.00 0.00 2.10
468 469 4.999950 GCCATGGATTCGAGACAATAGAAT 59.000 41.667 18.40 0.00 36.12 2.40
469 470 6.166279 GCCATGGATTCGAGACAATAGAATA 58.834 40.000 18.40 0.00 33.86 1.75
470 471 6.312426 GCCATGGATTCGAGACAATAGAATAG 59.688 42.308 18.40 0.00 33.86 1.73
471 472 7.606349 CCATGGATTCGAGACAATAGAATAGA 58.394 38.462 5.56 0.00 33.86 1.98
472 473 7.758980 CCATGGATTCGAGACAATAGAATAGAG 59.241 40.741 5.56 0.00 33.86 2.43
473 474 7.220741 TGGATTCGAGACAATAGAATAGAGG 57.779 40.000 0.00 0.00 33.86 3.69
474 475 7.004691 TGGATTCGAGACAATAGAATAGAGGA 58.995 38.462 0.00 0.00 33.86 3.71
475 476 7.175816 TGGATTCGAGACAATAGAATAGAGGAG 59.824 40.741 0.00 0.00 33.86 3.69
476 477 7.175990 GGATTCGAGACAATAGAATAGAGGAGT 59.824 40.741 0.00 0.00 33.86 3.85
477 478 6.869315 TCGAGACAATAGAATAGAGGAGTG 57.131 41.667 0.00 0.00 0.00 3.51
478 479 6.358178 TCGAGACAATAGAATAGAGGAGTGT 58.642 40.000 0.00 0.00 0.00 3.55
479 480 7.506971 TCGAGACAATAGAATAGAGGAGTGTA 58.493 38.462 0.00 0.00 0.00 2.90
480 481 7.991460 TCGAGACAATAGAATAGAGGAGTGTAA 59.009 37.037 0.00 0.00 0.00 2.41
481 482 8.071368 CGAGACAATAGAATAGAGGAGTGTAAC 58.929 40.741 0.00 0.00 0.00 2.50
482 483 8.824756 AGACAATAGAATAGAGGAGTGTAACA 57.175 34.615 0.00 0.00 41.43 2.41
483 484 9.427821 AGACAATAGAATAGAGGAGTGTAACAT 57.572 33.333 0.00 0.00 41.43 2.71
493 494 7.499321 AGAGGAGTGTAACATATTCTAGACG 57.501 40.000 0.00 0.00 41.43 4.18
494 495 7.281098 AGAGGAGTGTAACATATTCTAGACGA 58.719 38.462 0.00 0.00 41.43 4.20
495 496 7.442969 AGAGGAGTGTAACATATTCTAGACGAG 59.557 40.741 0.00 0.00 41.43 4.18
496 497 6.016943 AGGAGTGTAACATATTCTAGACGAGC 60.017 42.308 0.00 0.00 41.43 5.03
497 498 6.016943 GGAGTGTAACATATTCTAGACGAGCT 60.017 42.308 0.00 0.00 41.43 4.09
498 499 7.336161 AGTGTAACATATTCTAGACGAGCTT 57.664 36.000 0.00 0.00 41.43 3.74
499 500 7.419204 AGTGTAACATATTCTAGACGAGCTTC 58.581 38.462 0.00 0.00 41.43 3.86
500 501 6.357503 GTGTAACATATTCTAGACGAGCTTCG 59.642 42.308 0.00 0.00 41.08 3.79
501 502 3.891324 ACATATTCTAGACGAGCTTCGC 58.109 45.455 0.00 0.43 45.12 4.70
502 503 3.315470 ACATATTCTAGACGAGCTTCGCA 59.685 43.478 0.00 0.00 45.12 5.10
503 504 2.196295 ATTCTAGACGAGCTTCGCAC 57.804 50.000 0.00 1.79 45.12 5.34
504 505 0.879090 TTCTAGACGAGCTTCGCACA 59.121 50.000 0.00 0.00 45.12 4.57
505 506 0.168348 TCTAGACGAGCTTCGCACAC 59.832 55.000 5.63 0.00 45.12 3.82
506 507 1.128724 CTAGACGAGCTTCGCACACG 61.129 60.000 5.63 0.00 45.12 4.49
507 508 2.523184 TAGACGAGCTTCGCACACGG 62.523 60.000 5.63 0.00 45.12 4.94
527 528 3.855630 CGATAGCAGAAGGACGAGG 57.144 57.895 0.00 0.00 0.00 4.63
528 529 1.309950 CGATAGCAGAAGGACGAGGA 58.690 55.000 0.00 0.00 0.00 3.71
529 530 1.265635 CGATAGCAGAAGGACGAGGAG 59.734 57.143 0.00 0.00 0.00 3.69
530 531 2.303175 GATAGCAGAAGGACGAGGAGT 58.697 52.381 0.00 0.00 0.00 3.85
531 532 2.217510 TAGCAGAAGGACGAGGAGTT 57.782 50.000 0.00 0.00 0.00 3.01
532 533 2.217510 AGCAGAAGGACGAGGAGTTA 57.782 50.000 0.00 0.00 0.00 2.24
533 534 2.096248 AGCAGAAGGACGAGGAGTTAG 58.904 52.381 0.00 0.00 0.00 2.34
534 535 1.819903 GCAGAAGGACGAGGAGTTAGT 59.180 52.381 0.00 0.00 0.00 2.24
535 536 2.416162 GCAGAAGGACGAGGAGTTAGTG 60.416 54.545 0.00 0.00 0.00 2.74
536 537 3.082548 CAGAAGGACGAGGAGTTAGTGA 58.917 50.000 0.00 0.00 0.00 3.41
537 538 3.083293 AGAAGGACGAGGAGTTAGTGAC 58.917 50.000 0.00 0.00 0.00 3.67
538 539 1.836802 AGGACGAGGAGTTAGTGACC 58.163 55.000 0.00 0.00 0.00 4.02
539 540 1.355043 AGGACGAGGAGTTAGTGACCT 59.645 52.381 0.00 0.00 36.68 3.85
540 541 2.169330 GGACGAGGAGTTAGTGACCTT 58.831 52.381 0.00 0.00 33.89 3.50
541 542 2.561858 GGACGAGGAGTTAGTGACCTTT 59.438 50.000 0.00 0.00 33.89 3.11
542 543 3.006644 GGACGAGGAGTTAGTGACCTTTT 59.993 47.826 0.00 0.00 33.89 2.27
543 544 3.988517 GACGAGGAGTTAGTGACCTTTTG 59.011 47.826 0.00 0.00 33.89 2.44
544 545 3.387050 ACGAGGAGTTAGTGACCTTTTGT 59.613 43.478 0.00 0.00 33.89 2.83
545 546 3.741344 CGAGGAGTTAGTGACCTTTTGTG 59.259 47.826 0.00 0.00 33.89 3.33
546 547 4.500887 CGAGGAGTTAGTGACCTTTTGTGA 60.501 45.833 0.00 0.00 33.89 3.58
547 548 4.962155 AGGAGTTAGTGACCTTTTGTGAG 58.038 43.478 0.00 0.00 0.00 3.51
548 549 4.065789 GGAGTTAGTGACCTTTTGTGAGG 58.934 47.826 0.00 0.00 42.75 3.86
549 550 4.202326 GGAGTTAGTGACCTTTTGTGAGGA 60.202 45.833 0.00 0.00 39.25 3.71
550 551 5.513267 GGAGTTAGTGACCTTTTGTGAGGAT 60.513 44.000 0.00 0.00 39.25 3.24
551 552 5.941788 AGTTAGTGACCTTTTGTGAGGATT 58.058 37.500 0.00 0.00 39.25 3.01
552 553 6.365520 AGTTAGTGACCTTTTGTGAGGATTT 58.634 36.000 0.00 0.00 39.25 2.17
553 554 7.514721 AGTTAGTGACCTTTTGTGAGGATTTA 58.485 34.615 0.00 0.00 39.25 1.40
554 555 7.661847 AGTTAGTGACCTTTTGTGAGGATTTAG 59.338 37.037 0.00 0.00 39.25 1.85
555 556 4.762251 AGTGACCTTTTGTGAGGATTTAGC 59.238 41.667 0.00 0.00 39.25 3.09
556 557 4.518970 GTGACCTTTTGTGAGGATTTAGCA 59.481 41.667 0.00 0.00 39.25 3.49
557 558 5.183904 GTGACCTTTTGTGAGGATTTAGCAT 59.816 40.000 0.00 0.00 39.25 3.79
558 559 5.774690 TGACCTTTTGTGAGGATTTAGCATT 59.225 36.000 0.00 0.00 39.25 3.56
559 560 6.029346 ACCTTTTGTGAGGATTTAGCATTG 57.971 37.500 0.00 0.00 39.25 2.82
560 561 5.539955 ACCTTTTGTGAGGATTTAGCATTGT 59.460 36.000 0.00 0.00 39.25 2.71
561 562 6.719370 ACCTTTTGTGAGGATTTAGCATTGTA 59.281 34.615 0.00 0.00 39.25 2.41
562 563 7.397192 ACCTTTTGTGAGGATTTAGCATTGTAT 59.603 33.333 0.00 0.00 39.25 2.29
563 564 7.703621 CCTTTTGTGAGGATTTAGCATTGTATG 59.296 37.037 0.00 0.00 39.25 2.39
575 576 2.632377 CATTGTATGCGGAGTTGGAGT 58.368 47.619 0.00 0.00 0.00 3.85
576 577 2.380084 TTGTATGCGGAGTTGGAGTC 57.620 50.000 0.00 0.00 0.00 3.36
577 578 1.557099 TGTATGCGGAGTTGGAGTCT 58.443 50.000 0.00 0.00 0.00 3.24
578 579 1.899814 TGTATGCGGAGTTGGAGTCTT 59.100 47.619 0.00 0.00 0.00 3.01
579 580 2.271800 GTATGCGGAGTTGGAGTCTTG 58.728 52.381 0.00 0.00 0.00 3.02
580 581 0.687354 ATGCGGAGTTGGAGTCTTGT 59.313 50.000 0.00 0.00 0.00 3.16
581 582 0.249868 TGCGGAGTTGGAGTCTTGTG 60.250 55.000 0.00 0.00 0.00 3.33
582 583 0.249911 GCGGAGTTGGAGTCTTGTGT 60.250 55.000 0.00 0.00 0.00 3.72
583 584 1.810412 GCGGAGTTGGAGTCTTGTGTT 60.810 52.381 0.00 0.00 0.00 3.32
584 585 1.867233 CGGAGTTGGAGTCTTGTGTTG 59.133 52.381 0.00 0.00 0.00 3.33
585 586 1.604278 GGAGTTGGAGTCTTGTGTTGC 59.396 52.381 0.00 0.00 0.00 4.17
586 587 1.604278 GAGTTGGAGTCTTGTGTTGCC 59.396 52.381 0.00 0.00 0.00 4.52
587 588 1.212935 AGTTGGAGTCTTGTGTTGCCT 59.787 47.619 0.00 0.00 0.00 4.75
588 589 1.604278 GTTGGAGTCTTGTGTTGCCTC 59.396 52.381 0.00 0.00 0.00 4.70
589 590 0.249868 TGGAGTCTTGTGTTGCCTCG 60.250 55.000 0.00 0.00 0.00 4.63
590 591 0.951040 GGAGTCTTGTGTTGCCTCGG 60.951 60.000 0.00 0.00 0.00 4.63
591 592 0.951040 GAGTCTTGTGTTGCCTCGGG 60.951 60.000 0.00 0.00 0.00 5.14
607 608 4.347453 GGCGGCTTGTGGTTGCTG 62.347 66.667 0.00 0.00 38.49 4.41
609 610 3.594775 CGGCTTGTGGTTGCTGCA 61.595 61.111 0.00 0.00 0.00 4.41
610 611 2.337532 GGCTTGTGGTTGCTGCAG 59.662 61.111 10.11 10.11 0.00 4.41
611 612 2.355481 GCTTGTGGTTGCTGCAGC 60.355 61.111 31.89 31.89 42.50 5.25
623 624 2.144482 GCTGCAGCACACAAAATTCT 57.856 45.000 33.36 0.00 41.59 2.40
624 625 2.056577 GCTGCAGCACACAAAATTCTC 58.943 47.619 33.36 0.00 41.59 2.87
625 626 2.288030 GCTGCAGCACACAAAATTCTCT 60.288 45.455 33.36 0.00 41.59 3.10
626 627 3.797865 GCTGCAGCACACAAAATTCTCTT 60.798 43.478 33.36 0.00 41.59 2.85
627 628 3.708890 TGCAGCACACAAAATTCTCTTG 58.291 40.909 0.00 0.00 0.00 3.02
628 629 3.130869 TGCAGCACACAAAATTCTCTTGT 59.869 39.130 0.00 0.00 37.49 3.16
629 630 4.337836 TGCAGCACACAAAATTCTCTTGTA 59.662 37.500 0.00 0.00 35.26 2.41
630 631 4.676924 GCAGCACACAAAATTCTCTTGTAC 59.323 41.667 0.00 0.00 35.26 2.90
631 632 5.733091 GCAGCACACAAAATTCTCTTGTACA 60.733 40.000 0.00 0.00 35.26 2.90
632 633 6.441274 CAGCACACAAAATTCTCTTGTACAT 58.559 36.000 0.00 0.00 35.26 2.29
633 634 6.919662 CAGCACACAAAATTCTCTTGTACATT 59.080 34.615 0.00 0.00 35.26 2.71
634 635 8.075574 CAGCACACAAAATTCTCTTGTACATTA 58.924 33.333 0.00 0.00 35.26 1.90
635 636 8.796475 AGCACACAAAATTCTCTTGTACATTAT 58.204 29.630 0.00 0.00 35.26 1.28
636 637 9.410556 GCACACAAAATTCTCTTGTACATTATT 57.589 29.630 0.00 0.00 35.26 1.40
664 665 9.635520 TCTCTCTTTTATGAAAGTTAAGGTACG 57.364 33.333 9.55 0.00 42.32 3.67
665 666 8.248117 TCTCTTTTATGAAAGTTAAGGTACGC 57.752 34.615 9.55 0.00 42.32 4.42
666 667 7.874016 TCTCTTTTATGAAAGTTAAGGTACGCA 59.126 33.333 9.55 0.00 42.32 5.24
667 668 8.380743 TCTTTTATGAAAGTTAAGGTACGCAA 57.619 30.769 9.55 0.00 42.32 4.85
668 669 9.005777 TCTTTTATGAAAGTTAAGGTACGCAAT 57.994 29.630 9.55 0.00 42.32 3.56
669 670 9.620660 CTTTTATGAAAGTTAAGGTACGCAATT 57.379 29.630 1.87 0.00 37.94 2.32
670 671 9.968870 TTTTATGAAAGTTAAGGTACGCAATTT 57.031 25.926 0.00 0.00 0.00 1.82
671 672 8.958175 TTATGAAAGTTAAGGTACGCAATTTG 57.042 30.769 0.00 0.00 0.00 2.32
672 673 5.216648 TGAAAGTTAAGGTACGCAATTTGC 58.783 37.500 11.42 11.42 40.69 3.68
763 764 3.170717 TGGTTAACCAACACCCAAAACA 58.829 40.909 25.19 0.00 44.35 2.83
764 765 3.581332 TGGTTAACCAACACCCAAAACAA 59.419 39.130 25.19 0.00 44.35 2.83
765 766 4.041198 TGGTTAACCAACACCCAAAACAAA 59.959 37.500 25.19 0.00 44.35 2.83
766 767 4.392445 GGTTAACCAACACCCAAAACAAAC 59.608 41.667 20.12 0.00 36.29 2.93
1153 1176 4.648626 ACCTCGTCCCCGTCGACA 62.649 66.667 17.16 0.00 33.71 4.35
1269 1292 3.970746 CTACCCCTCCGTCCCCGTT 62.971 68.421 0.00 0.00 0.00 4.44
1270 1293 2.572333 CTACCCCTCCGTCCCCGTTA 62.572 65.000 0.00 0.00 0.00 3.18
1332 1355 1.326213 CCATGCTCCAGGTCGTCTCT 61.326 60.000 0.00 0.00 0.00 3.10
1677 1700 4.430765 CGCAGCCTACCGGACGTT 62.431 66.667 9.46 0.00 0.00 3.99
1758 1781 1.630126 ATCTCCCCAATCAGCGCACT 61.630 55.000 11.47 0.00 0.00 4.40
2074 2097 6.433716 TGTTGTGAAATGAGATGGATTTGCTA 59.566 34.615 0.00 0.00 0.00 3.49
2163 2186 3.170717 ACAAGACTCGAGGGGAATAACA 58.829 45.455 18.41 0.00 0.00 2.41
2373 2396 2.816672 GGAAGCCAAGTTCTGAAGAAGG 59.183 50.000 0.00 0.00 34.27 3.46
2434 2457 2.308570 AGTACTGGATGAATGGCAACCA 59.691 45.455 0.00 0.00 46.01 3.67
2580 2608 1.117749 TCAGCTCTGTCTGTGGCACT 61.118 55.000 19.83 0.00 35.63 4.40
2694 2722 9.311916 TGACTATCTGTTTTTGAAATTTGGTTG 57.688 29.630 0.00 0.00 0.00 3.77
2709 2737 4.503714 TTGGTTGACTGGAGAAACTCTT 57.496 40.909 0.00 0.00 0.00 2.85
2884 2915 4.757149 ACTTGCATGTTTTACTGGACTCTC 59.243 41.667 0.00 0.00 0.00 3.20
3041 3072 8.409358 AAAAAGTGAACAAGATAGCCATAAGT 57.591 30.769 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.558359 CAACACTTGTTCTGGGATTCCC 59.442 50.000 15.40 15.40 39.25 3.97
9 10 2.558359 CCAACACTTGTTCTGGGATTCC 59.442 50.000 0.00 0.00 35.83 3.01
10 11 2.029918 GCCAACACTTGTTCTGGGATTC 60.030 50.000 2.92 0.00 35.83 2.52
11 12 1.963515 GCCAACACTTGTTCTGGGATT 59.036 47.619 2.92 0.00 35.83 3.01
12 13 1.145738 AGCCAACACTTGTTCTGGGAT 59.854 47.619 2.92 0.00 35.83 3.85
13 14 0.550914 AGCCAACACTTGTTCTGGGA 59.449 50.000 2.92 0.00 35.83 4.37
14 15 1.067516 CAAGCCAACACTTGTTCTGGG 59.932 52.381 2.92 0.00 41.74 4.45
15 16 2.497107 CAAGCCAACACTTGTTCTGG 57.503 50.000 0.00 0.00 41.74 3.86
22 23 1.724582 GACACGGCAAGCCAACACTT 61.725 55.000 12.19 0.00 35.37 3.16
23 24 2.124320 ACACGGCAAGCCAACACT 60.124 55.556 12.19 0.00 35.37 3.55
24 25 1.795170 ATGACACGGCAAGCCAACAC 61.795 55.000 12.19 0.59 35.37 3.32
25 26 1.514678 GATGACACGGCAAGCCAACA 61.515 55.000 12.19 5.56 35.37 3.33
26 27 1.210155 GATGACACGGCAAGCCAAC 59.790 57.895 12.19 0.00 35.37 3.77
27 28 1.228094 TGATGACACGGCAAGCCAA 60.228 52.632 12.19 0.00 35.37 4.52
28 29 1.965930 GTGATGACACGGCAAGCCA 60.966 57.895 12.19 0.00 37.28 4.75
29 30 2.690778 GGTGATGACACGGCAAGCC 61.691 63.158 0.00 0.00 46.77 4.35
30 31 1.514678 TTGGTGATGACACGGCAAGC 61.515 55.000 0.00 0.00 46.77 4.01
31 32 0.950836 TTTGGTGATGACACGGCAAG 59.049 50.000 0.00 0.00 46.77 4.01
32 33 0.950836 CTTTGGTGATGACACGGCAA 59.049 50.000 0.00 0.00 46.77 4.52
33 34 0.888736 CCTTTGGTGATGACACGGCA 60.889 55.000 0.00 0.00 46.77 5.69
34 35 1.875963 CCTTTGGTGATGACACGGC 59.124 57.895 0.00 0.00 46.77 5.68
35 36 1.875963 GCCTTTGGTGATGACACGG 59.124 57.895 0.00 0.00 46.77 4.94
36 37 1.497278 CGCCTTTGGTGATGACACG 59.503 57.895 0.00 0.00 46.77 4.49
37 38 1.210155 GCGCCTTTGGTGATGACAC 59.790 57.895 0.00 0.00 45.27 3.67
38 39 1.971167 GGCGCCTTTGGTGATGACA 60.971 57.895 22.15 0.00 34.74 3.58
39 40 2.877691 GGCGCCTTTGGTGATGAC 59.122 61.111 22.15 0.00 34.74 3.06
40 41 2.745884 CGGCGCCTTTGGTGATGA 60.746 61.111 26.68 0.00 34.74 2.92
41 42 4.481112 GCGGCGCCTTTGGTGATG 62.481 66.667 26.68 6.32 34.74 3.07
57 58 2.960170 CACTTGAGGCAGCTTGGC 59.040 61.111 0.00 0.00 44.10 4.52
58 59 1.602888 AGCACTTGAGGCAGCTTGG 60.603 57.895 0.00 0.00 32.52 3.61
59 60 0.887836 TCAGCACTTGAGGCAGCTTG 60.888 55.000 0.00 0.00 34.61 4.01
60 61 0.037877 ATCAGCACTTGAGGCAGCTT 59.962 50.000 0.00 0.00 39.68 3.74
61 62 0.392729 GATCAGCACTTGAGGCAGCT 60.393 55.000 0.00 0.00 39.68 4.24
62 63 0.675837 TGATCAGCACTTGAGGCAGC 60.676 55.000 0.00 0.00 39.68 5.25
63 64 1.738350 CTTGATCAGCACTTGAGGCAG 59.262 52.381 0.00 0.00 39.68 4.85
64 65 1.072806 ACTTGATCAGCACTTGAGGCA 59.927 47.619 0.00 0.00 39.68 4.75
65 66 1.467734 CACTTGATCAGCACTTGAGGC 59.532 52.381 0.00 0.00 39.68 4.70
66 67 2.082231 CCACTTGATCAGCACTTGAGG 58.918 52.381 0.00 0.00 39.68 3.86
67 68 2.740981 GTCCACTTGATCAGCACTTGAG 59.259 50.000 0.00 0.00 39.68 3.02
68 69 2.771089 GTCCACTTGATCAGCACTTGA 58.229 47.619 0.00 0.00 40.85 3.02
69 70 1.462283 CGTCCACTTGATCAGCACTTG 59.538 52.381 0.00 0.00 0.00 3.16
70 71 1.609061 CCGTCCACTTGATCAGCACTT 60.609 52.381 0.00 0.00 0.00 3.16
71 72 0.036952 CCGTCCACTTGATCAGCACT 60.037 55.000 0.00 0.00 0.00 4.40
72 73 1.021390 CCCGTCCACTTGATCAGCAC 61.021 60.000 0.00 0.00 0.00 4.40
73 74 1.296392 CCCGTCCACTTGATCAGCA 59.704 57.895 0.00 0.00 0.00 4.41
74 75 2.109126 GCCCGTCCACTTGATCAGC 61.109 63.158 0.00 0.00 0.00 4.26
75 76 1.450312 GGCCCGTCCACTTGATCAG 60.450 63.158 0.00 0.00 34.01 2.90
76 77 2.184020 CTGGCCCGTCCACTTGATCA 62.184 60.000 0.00 0.00 40.72 2.92
77 78 1.450312 CTGGCCCGTCCACTTGATC 60.450 63.158 0.00 0.00 40.72 2.92
78 79 2.671070 CTGGCCCGTCCACTTGAT 59.329 61.111 0.00 0.00 40.72 2.57
79 80 4.329545 GCTGGCCCGTCCACTTGA 62.330 66.667 0.00 0.00 40.72 3.02
100 101 2.593468 ATCCCATGACGCCAACGAGG 62.593 60.000 0.00 0.00 43.93 4.63
101 102 1.153369 ATCCCATGACGCCAACGAG 60.153 57.895 0.00 0.00 43.93 4.18
102 103 1.449423 CATCCCATGACGCCAACGA 60.449 57.895 0.00 0.00 43.93 3.85
104 105 4.635769 TCATCCCATGACGCCAAC 57.364 55.556 0.00 0.00 33.59 3.77
111 112 2.362397 GCTCGAAGTAGTCATCCCATGA 59.638 50.000 0.00 0.00 36.84 3.07
112 113 2.363680 AGCTCGAAGTAGTCATCCCATG 59.636 50.000 0.00 0.00 0.00 3.66
113 114 2.363680 CAGCTCGAAGTAGTCATCCCAT 59.636 50.000 0.00 0.00 0.00 4.00
114 115 1.751351 CAGCTCGAAGTAGTCATCCCA 59.249 52.381 0.00 0.00 0.00 4.37
115 116 1.537135 GCAGCTCGAAGTAGTCATCCC 60.537 57.143 0.00 0.00 0.00 3.85
116 117 1.846541 GCAGCTCGAAGTAGTCATCC 58.153 55.000 0.00 0.00 0.00 3.51
117 118 1.471964 CGCAGCTCGAAGTAGTCATC 58.528 55.000 0.00 0.00 41.67 2.92
118 119 3.631714 CGCAGCTCGAAGTAGTCAT 57.368 52.632 0.00 0.00 41.67 3.06
136 137 2.743928 CACCTGGGAAGCGACTGC 60.744 66.667 0.00 0.00 43.24 4.40
137 138 2.743928 GCACCTGGGAAGCGACTG 60.744 66.667 0.00 0.00 0.00 3.51
138 139 2.925170 AGCACCTGGGAAGCGACT 60.925 61.111 0.00 0.00 0.00 4.18
139 140 2.743928 CAGCACCTGGGAAGCGAC 60.744 66.667 0.00 0.00 0.00 5.19
140 141 4.704833 GCAGCACCTGGGAAGCGA 62.705 66.667 0.00 0.00 31.21 4.93
146 147 4.408821 TAAGCCGCAGCACCTGGG 62.409 66.667 0.00 2.66 43.56 4.45
147 148 2.821366 CTAAGCCGCAGCACCTGG 60.821 66.667 0.00 0.00 43.56 4.45
148 149 2.821366 CCTAAGCCGCAGCACCTG 60.821 66.667 0.00 0.00 43.56 4.00
149 150 4.101448 CCCTAAGCCGCAGCACCT 62.101 66.667 0.00 0.00 43.56 4.00
150 151 4.096003 TCCCTAAGCCGCAGCACC 62.096 66.667 0.00 0.00 43.56 5.01
151 152 2.820037 GTCCCTAAGCCGCAGCAC 60.820 66.667 0.00 0.00 43.56 4.40
152 153 2.803155 CTTGTCCCTAAGCCGCAGCA 62.803 60.000 0.00 0.00 43.56 4.41
153 154 2.046314 TTGTCCCTAAGCCGCAGC 60.046 61.111 0.00 0.00 40.32 5.25
154 155 2.109126 GCTTGTCCCTAAGCCGCAG 61.109 63.158 0.00 0.00 45.62 5.18
155 156 2.046314 GCTTGTCCCTAAGCCGCA 60.046 61.111 0.00 0.00 45.62 5.69
160 161 3.343617 TCAAAATCGGCTTGTCCCTAAG 58.656 45.455 0.00 0.00 0.00 2.18
161 162 3.426787 TCAAAATCGGCTTGTCCCTAA 57.573 42.857 0.00 0.00 0.00 2.69
162 163 3.343617 CTTCAAAATCGGCTTGTCCCTA 58.656 45.455 0.00 0.00 0.00 3.53
163 164 2.162681 CTTCAAAATCGGCTTGTCCCT 58.837 47.619 0.00 0.00 0.00 4.20
164 165 1.202348 CCTTCAAAATCGGCTTGTCCC 59.798 52.381 0.00 0.00 0.00 4.46
165 166 2.159382 TCCTTCAAAATCGGCTTGTCC 58.841 47.619 0.00 0.00 0.00 4.02
166 167 2.162408 CCTCCTTCAAAATCGGCTTGTC 59.838 50.000 0.00 0.00 0.00 3.18
167 168 2.162681 CCTCCTTCAAAATCGGCTTGT 58.837 47.619 0.00 0.00 0.00 3.16
168 169 1.474077 CCCTCCTTCAAAATCGGCTTG 59.526 52.381 0.00 0.00 0.00 4.01
169 170 1.616994 CCCCTCCTTCAAAATCGGCTT 60.617 52.381 0.00 0.00 0.00 4.35
170 171 0.034089 CCCCTCCTTCAAAATCGGCT 60.034 55.000 0.00 0.00 0.00 5.52
171 172 0.034477 TCCCCTCCTTCAAAATCGGC 60.034 55.000 0.00 0.00 0.00 5.54
172 173 1.559682 TCTCCCCTCCTTCAAAATCGG 59.440 52.381 0.00 0.00 0.00 4.18
173 174 3.350219 TTCTCCCCTCCTTCAAAATCG 57.650 47.619 0.00 0.00 0.00 3.34
174 175 4.604156 ACATTCTCCCCTCCTTCAAAATC 58.396 43.478 0.00 0.00 0.00 2.17
175 176 4.044571 TGACATTCTCCCCTCCTTCAAAAT 59.955 41.667 0.00 0.00 0.00 1.82
176 177 3.397618 TGACATTCTCCCCTCCTTCAAAA 59.602 43.478 0.00 0.00 0.00 2.44
177 178 2.986019 TGACATTCTCCCCTCCTTCAAA 59.014 45.455 0.00 0.00 0.00 2.69
178 179 2.305927 GTGACATTCTCCCCTCCTTCAA 59.694 50.000 0.00 0.00 0.00 2.69
179 180 1.909302 GTGACATTCTCCCCTCCTTCA 59.091 52.381 0.00 0.00 0.00 3.02
180 181 1.134670 CGTGACATTCTCCCCTCCTTC 60.135 57.143 0.00 0.00 0.00 3.46
181 182 0.905357 CGTGACATTCTCCCCTCCTT 59.095 55.000 0.00 0.00 0.00 3.36
182 183 0.978146 CCGTGACATTCTCCCCTCCT 60.978 60.000 0.00 0.00 0.00 3.69
183 184 1.522569 CCGTGACATTCTCCCCTCC 59.477 63.158 0.00 0.00 0.00 4.30
184 185 1.522569 CCCGTGACATTCTCCCCTC 59.477 63.158 0.00 0.00 0.00 4.30
185 186 2.670148 GCCCGTGACATTCTCCCCT 61.670 63.158 0.00 0.00 0.00 4.79
186 187 2.124695 GCCCGTGACATTCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
187 188 1.745489 GTGCCCGTGACATTCTCCC 60.745 63.158 0.00 0.00 0.00 4.30
188 189 0.605319 TTGTGCCCGTGACATTCTCC 60.605 55.000 0.00 0.00 0.00 3.71
189 190 0.798776 CTTGTGCCCGTGACATTCTC 59.201 55.000 0.00 0.00 0.00 2.87
190 191 0.108585 ACTTGTGCCCGTGACATTCT 59.891 50.000 0.00 0.00 0.00 2.40
191 192 1.463444 GTACTTGTGCCCGTGACATTC 59.537 52.381 0.00 0.00 0.00 2.67
192 193 1.519408 GTACTTGTGCCCGTGACATT 58.481 50.000 0.00 0.00 0.00 2.71
193 194 0.321298 GGTACTTGTGCCCGTGACAT 60.321 55.000 0.00 0.00 0.00 3.06
194 195 1.070105 GGTACTTGTGCCCGTGACA 59.930 57.895 0.00 0.00 0.00 3.58
195 196 0.669625 GAGGTACTTGTGCCCGTGAC 60.670 60.000 4.30 0.00 41.55 3.67
196 197 0.830444 AGAGGTACTTGTGCCCGTGA 60.830 55.000 4.30 0.00 41.55 4.35
197 198 0.892755 TAGAGGTACTTGTGCCCGTG 59.107 55.000 4.30 0.00 41.55 4.94
198 199 0.893447 GTAGAGGTACTTGTGCCCGT 59.107 55.000 4.30 0.00 41.55 5.28
199 200 0.892755 TGTAGAGGTACTTGTGCCCG 59.107 55.000 4.30 0.00 41.55 6.13
200 201 2.696506 GTTGTAGAGGTACTTGTGCCC 58.303 52.381 4.30 0.00 41.55 5.36
201 202 2.334838 CGTTGTAGAGGTACTTGTGCC 58.665 52.381 0.00 0.00 41.55 5.01
202 203 1.725164 GCGTTGTAGAGGTACTTGTGC 59.275 52.381 0.00 0.00 41.55 4.57
203 204 2.729882 GTGCGTTGTAGAGGTACTTGTG 59.270 50.000 0.00 0.00 41.55 3.33
204 205 2.606308 CGTGCGTTGTAGAGGTACTTGT 60.606 50.000 0.00 0.00 41.55 3.16
205 206 1.983605 CGTGCGTTGTAGAGGTACTTG 59.016 52.381 0.00 0.00 41.55 3.16
206 207 1.068055 CCGTGCGTTGTAGAGGTACTT 60.068 52.381 0.00 0.00 41.55 2.24
208 209 1.074872 GCCGTGCGTTGTAGAGGTAC 61.075 60.000 0.00 0.00 0.00 3.34
209 210 1.213537 GCCGTGCGTTGTAGAGGTA 59.786 57.895 0.00 0.00 0.00 3.08
210 211 2.048503 GCCGTGCGTTGTAGAGGT 60.049 61.111 0.00 0.00 0.00 3.85
211 212 1.019278 ATTGCCGTGCGTTGTAGAGG 61.019 55.000 0.00 0.00 0.00 3.69
212 213 0.095245 CATTGCCGTGCGTTGTAGAG 59.905 55.000 0.00 0.00 0.00 2.43
213 214 0.319986 TCATTGCCGTGCGTTGTAGA 60.320 50.000 0.00 0.00 0.00 2.59
214 215 0.095245 CTCATTGCCGTGCGTTGTAG 59.905 55.000 0.00 0.00 0.00 2.74
215 216 1.295357 CCTCATTGCCGTGCGTTGTA 61.295 55.000 0.00 0.00 0.00 2.41
216 217 2.616330 CCTCATTGCCGTGCGTTGT 61.616 57.895 0.00 0.00 0.00 3.32
217 218 2.176546 CCTCATTGCCGTGCGTTG 59.823 61.111 0.00 0.00 0.00 4.10
218 219 2.031919 TCCTCATTGCCGTGCGTT 59.968 55.556 0.00 0.00 0.00 4.84
219 220 2.434884 CTCCTCATTGCCGTGCGT 60.435 61.111 0.00 0.00 0.00 5.24
220 221 3.197790 CCTCCTCATTGCCGTGCG 61.198 66.667 0.00 0.00 0.00 5.34
221 222 2.825836 CCCTCCTCATTGCCGTGC 60.826 66.667 0.00 0.00 0.00 5.34
222 223 2.825836 GCCCTCCTCATTGCCGTG 60.826 66.667 0.00 0.00 0.00 4.94
223 224 4.115199 GGCCCTCCTCATTGCCGT 62.115 66.667 0.00 0.00 33.59 5.68
225 226 3.797353 TCGGCCCTCCTCATTGCC 61.797 66.667 0.00 0.00 40.54 4.52
226 227 2.514824 GTCGGCCCTCCTCATTGC 60.515 66.667 0.00 0.00 0.00 3.56
227 228 2.190578 GGTCGGCCCTCCTCATTG 59.809 66.667 0.00 0.00 0.00 2.82
237 238 2.245438 CTCTTCCTCTTGGGTCGGCC 62.245 65.000 0.00 0.00 36.25 6.13
238 239 1.219393 CTCTTCCTCTTGGGTCGGC 59.781 63.158 0.00 0.00 36.25 5.54
239 240 0.533032 GTCTCTTCCTCTTGGGTCGG 59.467 60.000 0.00 0.00 36.25 4.79
240 241 0.171455 CGTCTCTTCCTCTTGGGTCG 59.829 60.000 0.00 0.00 36.25 4.79
241 242 0.533032 CCGTCTCTTCCTCTTGGGTC 59.467 60.000 0.00 0.00 36.25 4.46
242 243 1.545706 GCCGTCTCTTCCTCTTGGGT 61.546 60.000 0.00 0.00 36.25 4.51
243 244 1.219393 GCCGTCTCTTCCTCTTGGG 59.781 63.158 0.00 0.00 0.00 4.12
244 245 1.219393 GGCCGTCTCTTCCTCTTGG 59.781 63.158 0.00 0.00 0.00 3.61
245 246 1.219393 GGGCCGTCTCTTCCTCTTG 59.781 63.158 0.00 0.00 0.00 3.02
246 247 2.352032 CGGGCCGTCTCTTCCTCTT 61.352 63.158 19.97 0.00 0.00 2.85
247 248 2.756283 CGGGCCGTCTCTTCCTCT 60.756 66.667 19.97 0.00 0.00 3.69
248 249 3.839432 CCGGGCCGTCTCTTCCTC 61.839 72.222 26.32 0.00 0.00 3.71
249 250 4.698625 ACCGGGCCGTCTCTTCCT 62.699 66.667 26.32 0.00 0.00 3.36
250 251 4.144703 GACCGGGCCGTCTCTTCC 62.145 72.222 26.32 1.49 0.00 3.46
251 252 3.379445 TGACCGGGCCGTCTCTTC 61.379 66.667 26.32 12.81 33.70 2.87
252 253 3.692406 GTGACCGGGCCGTCTCTT 61.692 66.667 26.32 2.80 33.70 2.85
253 254 4.988716 TGTGACCGGGCCGTCTCT 62.989 66.667 26.32 3.51 33.70 3.10
254 255 3.934391 CTTGTGACCGGGCCGTCTC 62.934 68.421 26.32 20.89 33.70 3.36
255 256 4.003788 CTTGTGACCGGGCCGTCT 62.004 66.667 26.32 9.41 33.70 4.18
256 257 3.819877 AACTTGTGACCGGGCCGTC 62.820 63.158 26.32 21.30 0.00 4.79
257 258 3.409605 AAACTTGTGACCGGGCCGT 62.410 57.895 26.32 13.20 0.00 5.68
258 259 2.593436 AAACTTGTGACCGGGCCG 60.593 61.111 21.46 21.46 0.00 6.13
259 260 1.527380 TCAAACTTGTGACCGGGCC 60.527 57.895 3.83 0.00 0.00 5.80
260 261 1.652563 GTCAAACTTGTGACCGGGC 59.347 57.895 6.32 1.57 41.79 6.13
265 266 1.065551 GTGCTGGGTCAAACTTGTGAC 59.934 52.381 0.00 0.00 45.99 3.67
266 267 1.388547 GTGCTGGGTCAAACTTGTGA 58.611 50.000 0.00 0.00 0.00 3.58
267 268 0.385390 GGTGCTGGGTCAAACTTGTG 59.615 55.000 0.00 0.00 0.00 3.33
268 269 0.755327 GGGTGCTGGGTCAAACTTGT 60.755 55.000 0.00 0.00 0.00 3.16
269 270 0.468029 AGGGTGCTGGGTCAAACTTG 60.468 55.000 0.00 0.00 0.00 3.16
270 271 0.468029 CAGGGTGCTGGGTCAAACTT 60.468 55.000 0.00 0.00 0.00 2.66
271 272 1.151450 CAGGGTGCTGGGTCAAACT 59.849 57.895 0.00 0.00 0.00 2.66
272 273 1.903404 CCAGGGTGCTGGGTCAAAC 60.903 63.158 0.00 0.00 40.68 2.93
273 274 2.520458 CCAGGGTGCTGGGTCAAA 59.480 61.111 0.00 0.00 40.68 2.69
279 280 1.063717 ACATAATTCCCAGGGTGCTGG 60.064 52.381 5.01 0.00 43.86 4.85
280 281 2.026641 CACATAATTCCCAGGGTGCTG 58.973 52.381 5.01 0.26 0.00 4.41
281 282 1.063717 CCACATAATTCCCAGGGTGCT 60.064 52.381 5.01 0.00 0.00 4.40
282 283 1.064017 TCCACATAATTCCCAGGGTGC 60.064 52.381 5.01 0.00 0.00 5.01
283 284 3.600448 ATCCACATAATTCCCAGGGTG 57.400 47.619 5.01 0.00 0.00 4.61
284 285 4.731929 ACTTATCCACATAATTCCCAGGGT 59.268 41.667 5.01 0.00 0.00 4.34
285 286 5.072741 CACTTATCCACATAATTCCCAGGG 58.927 45.833 0.00 0.00 0.00 4.45
286 287 5.694995 ACACTTATCCACATAATTCCCAGG 58.305 41.667 0.00 0.00 0.00 4.45
287 288 6.936900 CCTACACTTATCCACATAATTCCCAG 59.063 42.308 0.00 0.00 0.00 4.45
288 289 6.388689 ACCTACACTTATCCACATAATTCCCA 59.611 38.462 0.00 0.00 0.00 4.37
289 290 6.710744 CACCTACACTTATCCACATAATTCCC 59.289 42.308 0.00 0.00 0.00 3.97
290 291 7.226720 CACACCTACACTTATCCACATAATTCC 59.773 40.741 0.00 0.00 0.00 3.01
291 292 7.254795 GCACACCTACACTTATCCACATAATTC 60.255 40.741 0.00 0.00 0.00 2.17
292 293 6.542370 GCACACCTACACTTATCCACATAATT 59.458 38.462 0.00 0.00 0.00 1.40
293 294 6.055588 GCACACCTACACTTATCCACATAAT 58.944 40.000 0.00 0.00 0.00 1.28
294 295 5.424757 GCACACCTACACTTATCCACATAA 58.575 41.667 0.00 0.00 0.00 1.90
295 296 4.440940 CGCACACCTACACTTATCCACATA 60.441 45.833 0.00 0.00 0.00 2.29
296 297 3.678806 CGCACACCTACACTTATCCACAT 60.679 47.826 0.00 0.00 0.00 3.21
297 298 2.353307 CGCACACCTACACTTATCCACA 60.353 50.000 0.00 0.00 0.00 4.17
298 299 2.268298 CGCACACCTACACTTATCCAC 58.732 52.381 0.00 0.00 0.00 4.02
299 300 1.897133 ACGCACACCTACACTTATCCA 59.103 47.619 0.00 0.00 0.00 3.41
300 301 2.268298 CACGCACACCTACACTTATCC 58.732 52.381 0.00 0.00 0.00 2.59
301 302 2.666508 CACACGCACACCTACACTTATC 59.333 50.000 0.00 0.00 0.00 1.75
302 303 2.611971 CCACACGCACACCTACACTTAT 60.612 50.000 0.00 0.00 0.00 1.73
303 304 1.269883 CCACACGCACACCTACACTTA 60.270 52.381 0.00 0.00 0.00 2.24
304 305 0.531974 CCACACGCACACCTACACTT 60.532 55.000 0.00 0.00 0.00 3.16
305 306 1.069090 CCACACGCACACCTACACT 59.931 57.895 0.00 0.00 0.00 3.55
306 307 1.959226 CCCACACGCACACCTACAC 60.959 63.158 0.00 0.00 0.00 2.90
307 308 2.423874 CCCACACGCACACCTACA 59.576 61.111 0.00 0.00 0.00 2.74
308 309 1.959226 CACCCACACGCACACCTAC 60.959 63.158 0.00 0.00 0.00 3.18
309 310 1.687297 TTCACCCACACGCACACCTA 61.687 55.000 0.00 0.00 0.00 3.08
310 311 2.544590 TTTCACCCACACGCACACCT 62.545 55.000 0.00 0.00 0.00 4.00
311 312 2.058829 CTTTCACCCACACGCACACC 62.059 60.000 0.00 0.00 0.00 4.16
312 313 1.355210 CTTTCACCCACACGCACAC 59.645 57.895 0.00 0.00 0.00 3.82
313 314 1.821759 CCTTTCACCCACACGCACA 60.822 57.895 0.00 0.00 0.00 4.57
314 315 2.551912 CCCTTTCACCCACACGCAC 61.552 63.158 0.00 0.00 0.00 5.34
315 316 2.203280 CCCTTTCACCCACACGCA 60.203 61.111 0.00 0.00 0.00 5.24
316 317 3.670377 GCCCTTTCACCCACACGC 61.670 66.667 0.00 0.00 0.00 5.34
317 318 1.586154 GATGCCCTTTCACCCACACG 61.586 60.000 0.00 0.00 0.00 4.49
318 319 1.586154 CGATGCCCTTTCACCCACAC 61.586 60.000 0.00 0.00 0.00 3.82
319 320 1.303236 CGATGCCCTTTCACCCACA 60.303 57.895 0.00 0.00 0.00 4.17
320 321 1.002624 TCGATGCCCTTTCACCCAC 60.003 57.895 0.00 0.00 0.00 4.61
321 322 1.198094 TCTCGATGCCCTTTCACCCA 61.198 55.000 0.00 0.00 0.00 4.51
322 323 0.462759 CTCTCGATGCCCTTTCACCC 60.463 60.000 0.00 0.00 0.00 4.61
323 324 0.537188 TCTCTCGATGCCCTTTCACC 59.463 55.000 0.00 0.00 0.00 4.02
324 325 2.386661 TTCTCTCGATGCCCTTTCAC 57.613 50.000 0.00 0.00 0.00 3.18
325 326 3.273434 CAATTCTCTCGATGCCCTTTCA 58.727 45.455 0.00 0.00 0.00 2.69
326 327 2.032675 GCAATTCTCTCGATGCCCTTTC 59.967 50.000 0.00 0.00 32.73 2.62
327 328 2.019984 GCAATTCTCTCGATGCCCTTT 58.980 47.619 0.00 0.00 32.73 3.11
328 329 1.673168 GCAATTCTCTCGATGCCCTT 58.327 50.000 0.00 0.00 32.73 3.95
329 330 3.393472 GCAATTCTCTCGATGCCCT 57.607 52.632 0.00 0.00 32.73 5.19
332 333 0.942962 CCAGGCAATTCTCTCGATGC 59.057 55.000 0.00 0.00 38.06 3.91
333 334 2.208431 GTCCAGGCAATTCTCTCGATG 58.792 52.381 0.00 0.00 0.00 3.84
334 335 1.139853 GGTCCAGGCAATTCTCTCGAT 59.860 52.381 0.00 0.00 0.00 3.59
335 336 0.537188 GGTCCAGGCAATTCTCTCGA 59.463 55.000 0.00 0.00 0.00 4.04
336 337 0.539051 AGGTCCAGGCAATTCTCTCG 59.461 55.000 0.00 0.00 0.00 4.04
337 338 1.280421 ACAGGTCCAGGCAATTCTCTC 59.720 52.381 0.00 0.00 0.00 3.20
338 339 1.366319 ACAGGTCCAGGCAATTCTCT 58.634 50.000 0.00 0.00 0.00 3.10
339 340 2.237392 AGTACAGGTCCAGGCAATTCTC 59.763 50.000 0.00 0.00 0.00 2.87
340 341 2.237392 GAGTACAGGTCCAGGCAATTCT 59.763 50.000 0.00 0.00 0.00 2.40
341 342 2.633488 GAGTACAGGTCCAGGCAATTC 58.367 52.381 0.00 0.00 0.00 2.17
342 343 1.282157 GGAGTACAGGTCCAGGCAATT 59.718 52.381 0.00 0.00 33.84 2.32
343 344 0.912486 GGAGTACAGGTCCAGGCAAT 59.088 55.000 0.00 0.00 33.84 3.56
344 345 0.178903 AGGAGTACAGGTCCAGGCAA 60.179 55.000 0.00 0.00 36.43 4.52
345 346 0.178903 AAGGAGTACAGGTCCAGGCA 60.179 55.000 0.00 0.00 36.43 4.75
346 347 0.537653 GAAGGAGTACAGGTCCAGGC 59.462 60.000 0.00 0.00 36.43 4.85
347 348 1.196012 GGAAGGAGTACAGGTCCAGG 58.804 60.000 0.00 0.00 36.43 4.45
348 349 1.827969 CAGGAAGGAGTACAGGTCCAG 59.172 57.143 0.00 0.00 36.43 3.86
349 350 1.552486 CCAGGAAGGAGTACAGGTCCA 60.552 57.143 0.00 0.00 41.22 4.02
350 351 1.196012 CCAGGAAGGAGTACAGGTCC 58.804 60.000 0.00 0.00 41.22 4.46
351 352 1.826096 GACCAGGAAGGAGTACAGGTC 59.174 57.143 0.00 0.00 41.22 3.85
352 353 1.552719 GGACCAGGAAGGAGTACAGGT 60.553 57.143 0.00 0.00 41.22 4.00
353 354 1.196012 GGACCAGGAAGGAGTACAGG 58.804 60.000 0.00 0.00 41.22 4.00
354 355 1.196012 GGGACCAGGAAGGAGTACAG 58.804 60.000 0.00 0.00 41.22 2.74
355 356 3.393854 GGGACCAGGAAGGAGTACA 57.606 57.895 0.00 0.00 41.22 2.90
369 370 2.235155 GTTCAGAGAGGAAGAAGGGGAC 59.765 54.545 0.00 0.00 0.00 4.46
370 371 2.112691 AGTTCAGAGAGGAAGAAGGGGA 59.887 50.000 0.00 0.00 0.00 4.81
371 372 2.499693 GAGTTCAGAGAGGAAGAAGGGG 59.500 54.545 0.00 0.00 0.00 4.79
372 373 3.440127 AGAGTTCAGAGAGGAAGAAGGG 58.560 50.000 0.00 0.00 0.00 3.95
373 374 4.344104 AGAGAGTTCAGAGAGGAAGAAGG 58.656 47.826 0.00 0.00 0.00 3.46
374 375 5.256474 AGAGAGAGTTCAGAGAGGAAGAAG 58.744 45.833 0.00 0.00 0.00 2.85
375 376 5.014123 AGAGAGAGAGTTCAGAGAGGAAGAA 59.986 44.000 0.00 0.00 0.00 2.52
376 377 4.536090 AGAGAGAGAGTTCAGAGAGGAAGA 59.464 45.833 0.00 0.00 0.00 2.87
377 378 4.848357 AGAGAGAGAGTTCAGAGAGGAAG 58.152 47.826 0.00 0.00 0.00 3.46
378 379 4.324254 GGAGAGAGAGAGTTCAGAGAGGAA 60.324 50.000 0.00 0.00 0.00 3.36
379 380 3.199946 GGAGAGAGAGAGTTCAGAGAGGA 59.800 52.174 0.00 0.00 0.00 3.71
380 381 3.545703 GGAGAGAGAGAGTTCAGAGAGG 58.454 54.545 0.00 0.00 0.00 3.69
381 382 3.200825 AGGGAGAGAGAGAGTTCAGAGAG 59.799 52.174 0.00 0.00 0.00 3.20
382 383 3.054434 CAGGGAGAGAGAGAGTTCAGAGA 60.054 52.174 0.00 0.00 0.00 3.10
383 384 3.282021 CAGGGAGAGAGAGAGTTCAGAG 58.718 54.545 0.00 0.00 0.00 3.35
384 385 2.620367 GCAGGGAGAGAGAGAGTTCAGA 60.620 54.545 0.00 0.00 0.00 3.27
385 386 1.750778 GCAGGGAGAGAGAGAGTTCAG 59.249 57.143 0.00 0.00 0.00 3.02
386 387 1.357420 AGCAGGGAGAGAGAGAGTTCA 59.643 52.381 0.00 0.00 0.00 3.18
387 388 2.143876 AGCAGGGAGAGAGAGAGTTC 57.856 55.000 0.00 0.00 0.00 3.01
388 389 2.225242 TGAAGCAGGGAGAGAGAGAGTT 60.225 50.000 0.00 0.00 0.00 3.01
389 390 1.357420 TGAAGCAGGGAGAGAGAGAGT 59.643 52.381 0.00 0.00 0.00 3.24
390 391 2.142356 TGAAGCAGGGAGAGAGAGAG 57.858 55.000 0.00 0.00 0.00 3.20
391 392 2.612285 TTGAAGCAGGGAGAGAGAGA 57.388 50.000 0.00 0.00 0.00 3.10
392 393 3.737663 CGAATTGAAGCAGGGAGAGAGAG 60.738 52.174 0.00 0.00 0.00 3.20
393 394 2.167281 CGAATTGAAGCAGGGAGAGAGA 59.833 50.000 0.00 0.00 0.00 3.10
394 395 2.548875 CGAATTGAAGCAGGGAGAGAG 58.451 52.381 0.00 0.00 0.00 3.20
395 396 1.406069 GCGAATTGAAGCAGGGAGAGA 60.406 52.381 0.00 0.00 0.00 3.10
396 397 1.012841 GCGAATTGAAGCAGGGAGAG 58.987 55.000 0.00 0.00 0.00 3.20
397 398 0.392998 GGCGAATTGAAGCAGGGAGA 60.393 55.000 0.00 0.00 34.54 3.71
398 399 0.393537 AGGCGAATTGAAGCAGGGAG 60.394 55.000 0.00 0.00 34.54 4.30
399 400 0.392998 GAGGCGAATTGAAGCAGGGA 60.393 55.000 0.00 0.00 34.54 4.20
400 401 1.379642 GGAGGCGAATTGAAGCAGGG 61.380 60.000 0.00 0.00 34.54 4.45
401 402 0.393537 AGGAGGCGAATTGAAGCAGG 60.394 55.000 0.00 0.00 34.54 4.85
402 403 2.315925 TAGGAGGCGAATTGAAGCAG 57.684 50.000 0.00 0.00 34.54 4.24
403 404 2.779755 TTAGGAGGCGAATTGAAGCA 57.220 45.000 0.00 0.00 34.54 3.91
404 405 3.627577 TGATTTAGGAGGCGAATTGAAGC 59.372 43.478 0.00 0.00 0.00 3.86
405 406 4.035675 GGTGATTTAGGAGGCGAATTGAAG 59.964 45.833 0.00 0.00 0.00 3.02
406 407 3.945285 GGTGATTTAGGAGGCGAATTGAA 59.055 43.478 0.00 0.00 0.00 2.69
407 408 3.054728 TGGTGATTTAGGAGGCGAATTGA 60.055 43.478 0.00 0.00 0.00 2.57
408 409 3.278574 TGGTGATTTAGGAGGCGAATTG 58.721 45.455 0.00 0.00 0.00 2.32
409 410 3.644966 TGGTGATTTAGGAGGCGAATT 57.355 42.857 0.00 0.00 0.00 2.17
410 411 3.644966 TTGGTGATTTAGGAGGCGAAT 57.355 42.857 0.00 0.00 0.00 3.34
411 412 3.644966 ATTGGTGATTTAGGAGGCGAA 57.355 42.857 0.00 0.00 0.00 4.70
412 413 3.644966 AATTGGTGATTTAGGAGGCGA 57.355 42.857 0.00 0.00 0.00 5.54
413 414 3.947834 AGAAATTGGTGATTTAGGAGGCG 59.052 43.478 0.00 0.00 38.06 5.52
414 415 4.339530 GGAGAAATTGGTGATTTAGGAGGC 59.660 45.833 0.00 0.00 38.06 4.70
415 416 4.889995 GGGAGAAATTGGTGATTTAGGAGG 59.110 45.833 0.00 0.00 38.06 4.30
416 417 5.591877 CAGGGAGAAATTGGTGATTTAGGAG 59.408 44.000 0.00 0.00 38.06 3.69
417 418 5.015178 ACAGGGAGAAATTGGTGATTTAGGA 59.985 40.000 0.00 0.00 38.06 2.94
418 419 5.264395 ACAGGGAGAAATTGGTGATTTAGG 58.736 41.667 0.00 0.00 38.06 2.69
419 420 7.041780 CGATACAGGGAGAAATTGGTGATTTAG 60.042 40.741 0.00 0.00 38.06 1.85
420 421 6.765989 CGATACAGGGAGAAATTGGTGATTTA 59.234 38.462 0.00 0.00 38.06 1.40
421 422 5.590259 CGATACAGGGAGAAATTGGTGATTT 59.410 40.000 0.00 0.00 40.61 2.17
422 423 5.126067 CGATACAGGGAGAAATTGGTGATT 58.874 41.667 0.00 0.00 0.00 2.57
423 424 4.708177 CGATACAGGGAGAAATTGGTGAT 58.292 43.478 0.00 0.00 0.00 3.06
424 425 3.681594 GCGATACAGGGAGAAATTGGTGA 60.682 47.826 0.00 0.00 0.00 4.02
425 426 2.614057 GCGATACAGGGAGAAATTGGTG 59.386 50.000 0.00 0.00 0.00 4.17
426 427 2.421529 GGCGATACAGGGAGAAATTGGT 60.422 50.000 0.00 0.00 0.00 3.67
427 428 2.222027 GGCGATACAGGGAGAAATTGG 58.778 52.381 0.00 0.00 0.00 3.16
428 429 2.917933 TGGCGATACAGGGAGAAATTG 58.082 47.619 0.00 0.00 0.00 2.32
429 430 3.480470 CATGGCGATACAGGGAGAAATT 58.520 45.455 0.00 0.00 0.00 1.82
430 431 2.224621 CCATGGCGATACAGGGAGAAAT 60.225 50.000 0.00 0.00 44.73 2.17
431 432 1.140852 CCATGGCGATACAGGGAGAAA 59.859 52.381 0.00 0.00 44.73 2.52
432 433 0.758734 CCATGGCGATACAGGGAGAA 59.241 55.000 0.00 0.00 44.73 2.87
433 434 0.105709 TCCATGGCGATACAGGGAGA 60.106 55.000 6.96 0.00 45.45 3.71
434 435 2.440946 TCCATGGCGATACAGGGAG 58.559 57.895 6.96 0.00 45.45 4.30
436 437 1.813513 GAATCCATGGCGATACAGGG 58.186 55.000 6.96 0.00 43.38 4.45
437 438 1.000843 TCGAATCCATGGCGATACAGG 59.999 52.381 6.96 0.00 0.00 4.00
438 439 2.029918 TCTCGAATCCATGGCGATACAG 60.030 50.000 6.96 0.00 33.20 2.74
439 440 1.960689 TCTCGAATCCATGGCGATACA 59.039 47.619 6.96 0.00 33.20 2.29
440 441 2.288213 TGTCTCGAATCCATGGCGATAC 60.288 50.000 16.59 16.59 33.51 2.24
441 442 1.960689 TGTCTCGAATCCATGGCGATA 59.039 47.619 6.96 0.25 33.20 2.92
442 443 0.752658 TGTCTCGAATCCATGGCGAT 59.247 50.000 6.96 0.00 33.20 4.58
443 444 0.534873 TTGTCTCGAATCCATGGCGA 59.465 50.000 6.96 9.88 0.00 5.54
444 445 1.586422 ATTGTCTCGAATCCATGGCG 58.414 50.000 6.96 5.26 0.00 5.69
445 446 3.995199 TCTATTGTCTCGAATCCATGGC 58.005 45.455 6.96 0.00 0.00 4.40
446 447 7.606349 TCTATTCTATTGTCTCGAATCCATGG 58.394 38.462 4.97 4.97 0.00 3.66
447 448 7.758980 CCTCTATTCTATTGTCTCGAATCCATG 59.241 40.741 0.00 0.00 0.00 3.66
448 449 7.671819 TCCTCTATTCTATTGTCTCGAATCCAT 59.328 37.037 0.00 0.00 0.00 3.41
449 450 7.004691 TCCTCTATTCTATTGTCTCGAATCCA 58.995 38.462 0.00 0.00 0.00 3.41
450 451 7.175990 ACTCCTCTATTCTATTGTCTCGAATCC 59.824 40.741 0.00 0.00 0.00 3.01
451 452 8.020819 CACTCCTCTATTCTATTGTCTCGAATC 58.979 40.741 0.00 0.00 0.00 2.52
452 453 7.504238 ACACTCCTCTATTCTATTGTCTCGAAT 59.496 37.037 0.00 0.00 0.00 3.34
453 454 6.829298 ACACTCCTCTATTCTATTGTCTCGAA 59.171 38.462 0.00 0.00 0.00 3.71
454 455 6.358178 ACACTCCTCTATTCTATTGTCTCGA 58.642 40.000 0.00 0.00 0.00 4.04
455 456 6.627395 ACACTCCTCTATTCTATTGTCTCG 57.373 41.667 0.00 0.00 0.00 4.04
456 457 8.904834 TGTTACACTCCTCTATTCTATTGTCTC 58.095 37.037 0.00 0.00 0.00 3.36
457 458 8.824756 TGTTACACTCCTCTATTCTATTGTCT 57.175 34.615 0.00 0.00 0.00 3.41
467 468 9.221933 CGTCTAGAATATGTTACACTCCTCTAT 57.778 37.037 0.00 0.00 0.00 1.98
468 469 8.427276 TCGTCTAGAATATGTTACACTCCTCTA 58.573 37.037 0.00 0.00 0.00 2.43
469 470 7.281098 TCGTCTAGAATATGTTACACTCCTCT 58.719 38.462 0.00 0.00 0.00 3.69
470 471 7.493743 TCGTCTAGAATATGTTACACTCCTC 57.506 40.000 0.00 0.00 0.00 3.71
471 472 6.016943 GCTCGTCTAGAATATGTTACACTCCT 60.017 42.308 0.00 0.00 0.00 3.69
472 473 6.016943 AGCTCGTCTAGAATATGTTACACTCC 60.017 42.308 0.00 0.00 0.00 3.85
473 474 6.961576 AGCTCGTCTAGAATATGTTACACTC 58.038 40.000 0.00 0.00 0.00 3.51
474 475 6.945938 AGCTCGTCTAGAATATGTTACACT 57.054 37.500 0.00 0.00 0.00 3.55
475 476 6.357503 CGAAGCTCGTCTAGAATATGTTACAC 59.642 42.308 0.00 0.00 34.72 2.90
476 477 6.427974 CGAAGCTCGTCTAGAATATGTTACA 58.572 40.000 0.00 0.00 34.72 2.41
477 478 6.898451 CGAAGCTCGTCTAGAATATGTTAC 57.102 41.667 0.00 0.00 34.72 2.50
500 501 3.264897 CTGCTATCGCCCGTGTGC 61.265 66.667 0.00 0.00 34.43 4.57
501 502 1.148157 CTTCTGCTATCGCCCGTGTG 61.148 60.000 0.00 0.00 34.43 3.82
502 503 1.141881 CTTCTGCTATCGCCCGTGT 59.858 57.895 0.00 0.00 34.43 4.49
503 504 1.592669 CCTTCTGCTATCGCCCGTG 60.593 63.158 0.00 0.00 34.43 4.94
504 505 1.756950 TCCTTCTGCTATCGCCCGT 60.757 57.895 0.00 0.00 34.43 5.28
505 506 1.300233 GTCCTTCTGCTATCGCCCG 60.300 63.158 0.00 0.00 34.43 6.13
506 507 1.300233 CGTCCTTCTGCTATCGCCC 60.300 63.158 0.00 0.00 34.43 6.13
507 508 0.318275 CTCGTCCTTCTGCTATCGCC 60.318 60.000 0.00 0.00 34.43 5.54
508 509 0.318275 CCTCGTCCTTCTGCTATCGC 60.318 60.000 0.00 0.00 0.00 4.58
509 510 1.265635 CTCCTCGTCCTTCTGCTATCG 59.734 57.143 0.00 0.00 0.00 2.92
510 511 2.303175 ACTCCTCGTCCTTCTGCTATC 58.697 52.381 0.00 0.00 0.00 2.08
511 512 2.445682 ACTCCTCGTCCTTCTGCTAT 57.554 50.000 0.00 0.00 0.00 2.97
512 513 2.217510 AACTCCTCGTCCTTCTGCTA 57.782 50.000 0.00 0.00 0.00 3.49
513 514 2.096248 CTAACTCCTCGTCCTTCTGCT 58.904 52.381 0.00 0.00 0.00 4.24
514 515 1.819903 ACTAACTCCTCGTCCTTCTGC 59.180 52.381 0.00 0.00 0.00 4.26
515 516 3.082548 TCACTAACTCCTCGTCCTTCTG 58.917 50.000 0.00 0.00 0.00 3.02
516 517 3.083293 GTCACTAACTCCTCGTCCTTCT 58.917 50.000 0.00 0.00 0.00 2.85
517 518 2.164017 GGTCACTAACTCCTCGTCCTTC 59.836 54.545 0.00 0.00 0.00 3.46
518 519 2.169330 GGTCACTAACTCCTCGTCCTT 58.831 52.381 0.00 0.00 0.00 3.36
519 520 1.355043 AGGTCACTAACTCCTCGTCCT 59.645 52.381 0.00 0.00 0.00 3.85
520 521 1.836802 AGGTCACTAACTCCTCGTCC 58.163 55.000 0.00 0.00 0.00 4.79
521 522 3.938289 AAAGGTCACTAACTCCTCGTC 57.062 47.619 0.00 0.00 0.00 4.20
522 523 3.387050 ACAAAAGGTCACTAACTCCTCGT 59.613 43.478 0.00 0.00 0.00 4.18
523 524 3.741344 CACAAAAGGTCACTAACTCCTCG 59.259 47.826 0.00 0.00 0.00 4.63
524 525 4.957296 TCACAAAAGGTCACTAACTCCTC 58.043 43.478 0.00 0.00 0.00 3.71
525 526 4.202367 CCTCACAAAAGGTCACTAACTCCT 60.202 45.833 0.00 0.00 0.00 3.69
526 527 4.065789 CCTCACAAAAGGTCACTAACTCC 58.934 47.826 0.00 0.00 0.00 3.85
527 528 4.957296 TCCTCACAAAAGGTCACTAACTC 58.043 43.478 0.00 0.00 37.69 3.01
528 529 5.568620 ATCCTCACAAAAGGTCACTAACT 57.431 39.130 0.00 0.00 37.69 2.24
529 530 6.635030 AAATCCTCACAAAAGGTCACTAAC 57.365 37.500 0.00 0.00 37.69 2.34
530 531 6.430000 GCTAAATCCTCACAAAAGGTCACTAA 59.570 38.462 0.00 0.00 37.69 2.24
531 532 5.938125 GCTAAATCCTCACAAAAGGTCACTA 59.062 40.000 0.00 0.00 37.69 2.74
532 533 4.762251 GCTAAATCCTCACAAAAGGTCACT 59.238 41.667 0.00 0.00 37.69 3.41
533 534 4.518970 TGCTAAATCCTCACAAAAGGTCAC 59.481 41.667 0.00 0.00 37.69 3.67
534 535 4.724399 TGCTAAATCCTCACAAAAGGTCA 58.276 39.130 0.00 0.00 37.69 4.02
535 536 5.904362 ATGCTAAATCCTCACAAAAGGTC 57.096 39.130 0.00 0.00 37.69 3.85
536 537 5.539955 ACAATGCTAAATCCTCACAAAAGGT 59.460 36.000 0.00 0.00 37.69 3.50
537 538 6.029346 ACAATGCTAAATCCTCACAAAAGG 57.971 37.500 0.00 0.00 37.81 3.11
538 539 8.624701 CATACAATGCTAAATCCTCACAAAAG 57.375 34.615 0.00 0.00 0.00 2.27
555 556 2.609459 GACTCCAACTCCGCATACAATG 59.391 50.000 0.00 0.00 0.00 2.82
556 557 2.501723 AGACTCCAACTCCGCATACAAT 59.498 45.455 0.00 0.00 0.00 2.71
557 558 1.899814 AGACTCCAACTCCGCATACAA 59.100 47.619 0.00 0.00 0.00 2.41
558 559 1.557099 AGACTCCAACTCCGCATACA 58.443 50.000 0.00 0.00 0.00 2.29
559 560 2.271800 CAAGACTCCAACTCCGCATAC 58.728 52.381 0.00 0.00 0.00 2.39
560 561 1.899814 ACAAGACTCCAACTCCGCATA 59.100 47.619 0.00 0.00 0.00 3.14
561 562 0.687354 ACAAGACTCCAACTCCGCAT 59.313 50.000 0.00 0.00 0.00 4.73
562 563 0.249868 CACAAGACTCCAACTCCGCA 60.250 55.000 0.00 0.00 0.00 5.69
563 564 0.249911 ACACAAGACTCCAACTCCGC 60.250 55.000 0.00 0.00 0.00 5.54
564 565 1.867233 CAACACAAGACTCCAACTCCG 59.133 52.381 0.00 0.00 0.00 4.63
565 566 1.604278 GCAACACAAGACTCCAACTCC 59.396 52.381 0.00 0.00 0.00 3.85
566 567 1.604278 GGCAACACAAGACTCCAACTC 59.396 52.381 0.00 0.00 0.00 3.01
567 568 1.212935 AGGCAACACAAGACTCCAACT 59.787 47.619 0.00 0.00 41.41 3.16
568 569 1.604278 GAGGCAACACAAGACTCCAAC 59.396 52.381 0.00 0.00 41.41 3.77
569 570 1.810031 CGAGGCAACACAAGACTCCAA 60.810 52.381 0.00 0.00 41.41 3.53
570 571 0.249868 CGAGGCAACACAAGACTCCA 60.250 55.000 0.00 0.00 41.41 3.86
571 572 0.951040 CCGAGGCAACACAAGACTCC 60.951 60.000 0.00 0.00 41.41 3.85
572 573 0.951040 CCCGAGGCAACACAAGACTC 60.951 60.000 0.00 0.00 41.41 3.36
573 574 1.071471 CCCGAGGCAACACAAGACT 59.929 57.895 0.00 0.00 41.41 3.24
574 575 3.655481 CCCGAGGCAACACAAGAC 58.345 61.111 0.00 0.00 41.41 3.01
590 591 4.347453 CAGCAACCACAAGCCGCC 62.347 66.667 0.00 0.00 0.00 6.13
592 593 3.547249 CTGCAGCAACCACAAGCCG 62.547 63.158 0.00 0.00 0.00 5.52
593 594 2.337532 CTGCAGCAACCACAAGCC 59.662 61.111 0.00 0.00 0.00 4.35
594 595 2.355481 GCTGCAGCAACCACAAGC 60.355 61.111 33.36 2.16 41.59 4.01
604 605 2.056577 GAGAATTTTGTGTGCTGCAGC 58.943 47.619 31.89 31.89 42.50 5.25
605 606 3.637998 AGAGAATTTTGTGTGCTGCAG 57.362 42.857 10.11 10.11 0.00 4.41
606 607 3.130869 ACAAGAGAATTTTGTGTGCTGCA 59.869 39.130 0.00 0.00 37.38 4.41
607 608 3.709987 ACAAGAGAATTTTGTGTGCTGC 58.290 40.909 0.00 0.00 37.38 5.25
608 609 5.820131 TGTACAAGAGAATTTTGTGTGCTG 58.180 37.500 0.00 0.00 39.03 4.41
609 610 6.639632 ATGTACAAGAGAATTTTGTGTGCT 57.360 33.333 0.00 0.00 39.03 4.40
610 611 8.970691 ATAATGTACAAGAGAATTTTGTGTGC 57.029 30.769 0.00 0.00 39.03 4.57
638 639 9.635520 CGTACCTTAACTTTCATAAAAGAGAGA 57.364 33.333 0.00 0.00 43.90 3.10
639 640 8.381387 GCGTACCTTAACTTTCATAAAAGAGAG 58.619 37.037 0.00 0.00 43.90 3.20
640 641 7.874016 TGCGTACCTTAACTTTCATAAAAGAGA 59.126 33.333 0.00 0.00 43.90 3.10
641 642 8.025243 TGCGTACCTTAACTTTCATAAAAGAG 57.975 34.615 0.00 0.00 43.90 2.85
642 643 7.966246 TGCGTACCTTAACTTTCATAAAAGA 57.034 32.000 0.00 0.00 43.90 2.52
643 644 9.620660 AATTGCGTACCTTAACTTTCATAAAAG 57.379 29.630 0.00 0.00 46.11 2.27
644 645 9.968870 AAATTGCGTACCTTAACTTTCATAAAA 57.031 25.926 0.00 0.00 0.00 1.52
645 646 9.400638 CAAATTGCGTACCTTAACTTTCATAAA 57.599 29.630 0.00 0.00 0.00 1.40
646 647 7.539366 GCAAATTGCGTACCTTAACTTTCATAA 59.461 33.333 0.90 0.00 31.71 1.90
647 648 7.024768 GCAAATTGCGTACCTTAACTTTCATA 58.975 34.615 0.90 0.00 31.71 2.15
648 649 5.861787 GCAAATTGCGTACCTTAACTTTCAT 59.138 36.000 0.90 0.00 31.71 2.57
649 650 5.216648 GCAAATTGCGTACCTTAACTTTCA 58.783 37.500 0.90 0.00 31.71 2.69
650 651 5.740838 GCAAATTGCGTACCTTAACTTTC 57.259 39.130 0.90 0.00 31.71 2.62
664 665 4.939948 TTTTCGAAAGTACGCAAATTGC 57.060 36.364 10.98 8.09 40.69 3.56
763 764 5.573219 TCATGGACCATCTCATCTTTGTTT 58.427 37.500 3.21 0.00 0.00 2.83
764 765 5.183530 TCATGGACCATCTCATCTTTGTT 57.816 39.130 3.21 0.00 0.00 2.83
765 766 4.384978 CCTCATGGACCATCTCATCTTTGT 60.385 45.833 3.21 0.00 34.57 2.83
766 767 4.135306 CCTCATGGACCATCTCATCTTTG 58.865 47.826 3.21 0.00 34.57 2.77
850 856 1.077357 TCTCCTCTCCGCTCTGTCC 60.077 63.158 0.00 0.00 0.00 4.02
856 862 1.751162 CCTTCGTCTCCTCTCCGCT 60.751 63.158 0.00 0.00 0.00 5.52
1705 1728 2.764128 GGAGATGGTGCCCTCGGA 60.764 66.667 0.00 0.00 0.00 4.55
1758 1781 0.463295 CCTCGTAGTACTCCTCGGCA 60.463 60.000 0.00 0.00 0.00 5.69
2163 2186 2.314549 TCCCCATCCTAATTGGTTGCTT 59.685 45.455 0.00 0.00 34.88 3.91
2373 2396 8.408601 AGATTTGCACATCCAGAACAAATATAC 58.591 33.333 9.23 0.00 40.13 1.47
2631 2659 4.875536 TGACATCATTGCAGGTACATGTAC 59.124 41.667 25.00 25.00 35.40 2.90
2694 2722 5.470098 TGTGCAAATAAGAGTTTCTCCAGTC 59.530 40.000 0.00 0.00 0.00 3.51
2737 2768 4.457257 GGAGTATTAAGCAGGAATCCATGC 59.543 45.833 13.42 13.42 42.87 4.06
2844 2875 4.620982 GCAAGTGCACTCAAGGTTAAAAT 58.379 39.130 21.95 0.00 41.59 1.82
2884 2915 4.669318 CAGCCAATAATCTGAAGTTGCAG 58.331 43.478 0.00 0.00 37.24 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.