Multiple sequence alignment - TraesCS1B01G205100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G205100 chr1B 100.000 3518 0 0 1 3518 369203855 369207372 0.000000e+00 6497.0
1 TraesCS1B01G205100 chr1B 77.652 528 95 14 3014 3518 644328794 644329321 2.050000e-77 300.0
2 TraesCS1B01G205100 chr1A 95.247 2146 72 11 477 2609 308380445 308382573 0.000000e+00 3371.0
3 TraesCS1B01G205100 chr1A 96.479 142 4 1 2668 2809 308382580 308382720 2.110000e-57 233.0
4 TraesCS1B01G205100 chr1A 89.941 169 17 0 118 286 308379589 308379757 5.910000e-53 219.0
5 TraesCS1B01G205100 chr1D 96.115 1905 57 12 997 2897 237323914 237322023 0.000000e+00 3092.0
6 TraesCS1B01G205100 chr1D 81.616 495 59 19 477 957 237324395 237323919 7.130000e-102 381.0
7 TraesCS1B01G205100 chr1D 80.385 520 87 11 3011 3518 426890660 426890144 7.130000e-102 381.0
8 TraesCS1B01G205100 chr3D 82.699 1393 216 19 1127 2499 603015510 603014123 0.000000e+00 1214.0
9 TraesCS1B01G205100 chr3D 76.308 688 144 11 1125 1798 130974535 130975217 2.010000e-92 350.0
10 TraesCS1B01G205100 chr4A 80.858 1515 235 35 1022 2499 631579053 631577557 0.000000e+00 1140.0
11 TraesCS1B01G205100 chr4A 78.895 507 95 11 3019 3518 737291594 737291093 2.020000e-87 333.0
12 TraesCS1B01G205100 chr5B 81.232 1396 233 17 1126 2499 679324985 679326373 0.000000e+00 1099.0
13 TraesCS1B01G205100 chr5B 77.851 763 140 14 1130 1877 62950953 62950205 2.490000e-121 446.0
14 TraesCS1B01G205100 chr5D 79.961 1522 247 32 1019 2499 538344019 538345523 0.000000e+00 1068.0
15 TraesCS1B01G205100 chr5D 82.552 384 60 7 3138 3518 564225149 564224770 7.280000e-87 331.0
16 TraesCS1B01G205100 chr3B 81.538 715 113 13 1477 2173 810654372 810653659 3.940000e-159 571.0
17 TraesCS1B01G205100 chr3B 81.579 342 56 5 3181 3518 817173798 817173460 3.460000e-70 276.0
18 TraesCS1B01G205100 chr3B 75.789 285 57 7 3010 3288 708026693 708026971 2.200000e-27 134.0
19 TraesCS1B01G205100 chr3A 80.738 732 115 17 1477 2189 732934961 732934237 6.640000e-152 547.0
20 TraesCS1B01G205100 chr3A 81.238 517 85 9 1513 2017 732922728 732922212 1.180000e-109 407.0
21 TraesCS1B01G205100 chr3A 79.713 557 90 15 2976 3518 201496762 201496215 7.130000e-102 381.0
22 TraesCS1B01G205100 chr3A 80.039 516 84 13 3014 3518 70805918 70806425 7.180000e-97 364.0
23 TraesCS1B01G205100 chr3A 78.367 490 88 12 3044 3518 498260537 498260051 5.710000e-78 302.0
24 TraesCS1B01G205100 chr3A 87.931 58 5 2 65 121 572112915 572112971 2.270000e-07 67.6
25 TraesCS1B01G205100 chr4D 82.474 485 68 8 3044 3518 391645562 391646039 3.270000e-110 409.0
26 TraesCS1B01G205100 chr7D 80.230 521 90 8 3011 3518 111790200 111790720 2.560000e-101 379.0
27 TraesCS1B01G205100 chr7D 80.115 523 81 19 3010 3518 430923898 430923385 5.550000e-98 368.0
28 TraesCS1B01G205100 chr7D 78.854 506 85 16 3012 3511 619820453 619820942 4.380000e-84 322.0
29 TraesCS1B01G205100 chr7D 92.308 39 3 0 1370 1408 177876934 177876972 4.910000e-04 56.5
30 TraesCS1B01G205100 chr2A 81.995 411 62 11 3114 3514 113601780 113602188 4.350000e-89 339.0
31 TraesCS1B01G205100 chr2D 80.779 385 61 10 3032 3405 506650047 506649665 4.440000e-74 289.0
32 TraesCS1B01G205100 chr4B 76.867 415 82 9 3010 3411 581321471 581321058 4.570000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G205100 chr1B 369203855 369207372 3517 False 6497.000000 6497 100.0000 1 3518 1 chr1B.!!$F1 3517
1 TraesCS1B01G205100 chr1B 644328794 644329321 527 False 300.000000 300 77.6520 3014 3518 1 chr1B.!!$F2 504
2 TraesCS1B01G205100 chr1A 308379589 308382720 3131 False 1274.333333 3371 93.8890 118 2809 3 chr1A.!!$F1 2691
3 TraesCS1B01G205100 chr1D 237322023 237324395 2372 True 1736.500000 3092 88.8655 477 2897 2 chr1D.!!$R2 2420
4 TraesCS1B01G205100 chr1D 426890144 426890660 516 True 381.000000 381 80.3850 3011 3518 1 chr1D.!!$R1 507
5 TraesCS1B01G205100 chr3D 603014123 603015510 1387 True 1214.000000 1214 82.6990 1127 2499 1 chr3D.!!$R1 1372
6 TraesCS1B01G205100 chr3D 130974535 130975217 682 False 350.000000 350 76.3080 1125 1798 1 chr3D.!!$F1 673
7 TraesCS1B01G205100 chr4A 631577557 631579053 1496 True 1140.000000 1140 80.8580 1022 2499 1 chr4A.!!$R1 1477
8 TraesCS1B01G205100 chr4A 737291093 737291594 501 True 333.000000 333 78.8950 3019 3518 1 chr4A.!!$R2 499
9 TraesCS1B01G205100 chr5B 679324985 679326373 1388 False 1099.000000 1099 81.2320 1126 2499 1 chr5B.!!$F1 1373
10 TraesCS1B01G205100 chr5B 62950205 62950953 748 True 446.000000 446 77.8510 1130 1877 1 chr5B.!!$R1 747
11 TraesCS1B01G205100 chr5D 538344019 538345523 1504 False 1068.000000 1068 79.9610 1019 2499 1 chr5D.!!$F1 1480
12 TraesCS1B01G205100 chr3B 810653659 810654372 713 True 571.000000 571 81.5380 1477 2173 1 chr3B.!!$R1 696
13 TraesCS1B01G205100 chr3A 732934237 732934961 724 True 547.000000 547 80.7380 1477 2189 1 chr3A.!!$R4 712
14 TraesCS1B01G205100 chr3A 732922212 732922728 516 True 407.000000 407 81.2380 1513 2017 1 chr3A.!!$R3 504
15 TraesCS1B01G205100 chr3A 201496215 201496762 547 True 381.000000 381 79.7130 2976 3518 1 chr3A.!!$R1 542
16 TraesCS1B01G205100 chr3A 70805918 70806425 507 False 364.000000 364 80.0390 3014 3518 1 chr3A.!!$F1 504
17 TraesCS1B01G205100 chr7D 111790200 111790720 520 False 379.000000 379 80.2300 3011 3518 1 chr7D.!!$F1 507
18 TraesCS1B01G205100 chr7D 430923385 430923898 513 True 368.000000 368 80.1150 3010 3518 1 chr7D.!!$R1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 231 0.035152 TGCGCCTTGGACATGAAGAT 60.035 50.0 4.18 0.0 0.00 2.40 F
367 1036 0.178941 AAGGTCTGTACACCCCTCGT 60.179 55.0 8.64 0.0 37.09 4.18 F
861 1555 0.456628 GCTCTCTTCCTCCGTGTACC 59.543 60.0 0.00 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1453 2166 0.109086 CTGACGCGTCTGAAGGACAT 60.109 55.000 36.27 0.00 44.70 3.06 R
1824 2582 1.007734 GTCCACGAAGTCACGCTGA 60.008 57.895 0.00 0.00 41.61 4.26 R
2765 3559 1.320555 GTGCTATGAACGCGTACACAG 59.679 52.381 14.46 9.38 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.991243 AAGATTACATTGAACAACATGATTGG 57.009 30.769 0.00 0.00 0.00 3.16
26 27 8.125978 AGATTACATTGAACAACATGATTGGT 57.874 30.769 0.00 0.00 0.00 3.67
27 28 8.030692 AGATTACATTGAACAACATGATTGGTG 58.969 33.333 0.00 0.00 46.51 4.17
34 35 2.704725 AACATGATTGGTGTTGACGC 57.295 45.000 0.00 0.00 38.31 5.19
35 36 0.516877 ACATGATTGGTGTTGACGCG 59.483 50.000 3.53 3.53 0.00 6.01
36 37 0.795698 CATGATTGGTGTTGACGCGA 59.204 50.000 15.93 0.00 0.00 5.87
37 38 1.196581 CATGATTGGTGTTGACGCGAA 59.803 47.619 15.93 0.00 0.00 4.70
38 39 1.518325 TGATTGGTGTTGACGCGAAT 58.482 45.000 15.93 0.00 37.47 3.34
39 40 2.689646 TGATTGGTGTTGACGCGAATA 58.310 42.857 15.93 0.00 35.46 1.75
40 41 3.067833 TGATTGGTGTTGACGCGAATAA 58.932 40.909 15.93 1.05 35.46 1.40
41 42 3.498777 TGATTGGTGTTGACGCGAATAAA 59.501 39.130 15.93 0.00 35.46 1.40
42 43 3.965292 TTGGTGTTGACGCGAATAAAA 57.035 38.095 15.93 0.00 0.00 1.52
43 44 3.256285 TGGTGTTGACGCGAATAAAAC 57.744 42.857 15.93 9.72 0.00 2.43
44 45 2.873472 TGGTGTTGACGCGAATAAAACT 59.127 40.909 15.93 0.00 0.00 2.66
45 46 4.056740 TGGTGTTGACGCGAATAAAACTA 58.943 39.130 15.93 5.07 0.00 2.24
46 47 4.510711 TGGTGTTGACGCGAATAAAACTAA 59.489 37.500 15.93 0.66 0.00 2.24
47 48 5.007430 TGGTGTTGACGCGAATAAAACTAAA 59.993 36.000 15.93 0.00 0.00 1.85
48 49 5.908499 GGTGTTGACGCGAATAAAACTAAAA 59.092 36.000 15.93 0.00 0.00 1.52
49 50 6.579666 GGTGTTGACGCGAATAAAACTAAAAT 59.420 34.615 15.93 0.00 0.00 1.82
50 51 7.745594 GGTGTTGACGCGAATAAAACTAAAATA 59.254 33.333 15.93 0.00 0.00 1.40
51 52 8.561503 GTGTTGACGCGAATAAAACTAAAATAC 58.438 33.333 15.93 0.00 0.00 1.89
52 53 8.497554 TGTTGACGCGAATAAAACTAAAATACT 58.502 29.630 15.93 0.00 0.00 2.12
53 54 8.982649 GTTGACGCGAATAAAACTAAAATACTC 58.017 33.333 15.93 0.00 0.00 2.59
54 55 8.242085 TGACGCGAATAAAACTAAAATACTCA 57.758 30.769 15.93 0.00 0.00 3.41
55 56 8.164153 TGACGCGAATAAAACTAAAATACTCAC 58.836 33.333 15.93 0.00 0.00 3.51
56 57 8.248117 ACGCGAATAAAACTAAAATACTCACT 57.752 30.769 15.93 0.00 0.00 3.41
57 58 8.378421 ACGCGAATAAAACTAAAATACTCACTC 58.622 33.333 15.93 0.00 0.00 3.51
58 59 7.844653 CGCGAATAAAACTAAAATACTCACTCC 59.155 37.037 0.00 0.00 0.00 3.85
59 60 7.844653 GCGAATAAAACTAAAATACTCACTCCG 59.155 37.037 0.00 0.00 0.00 4.63
60 61 7.844653 CGAATAAAACTAAAATACTCACTCCGC 59.155 37.037 0.00 0.00 0.00 5.54
61 62 8.788325 AATAAAACTAAAATACTCACTCCGCT 57.212 30.769 0.00 0.00 0.00 5.52
62 63 6.723131 AAAACTAAAATACTCACTCCGCTC 57.277 37.500 0.00 0.00 0.00 5.03
63 64 5.662674 AACTAAAATACTCACTCCGCTCT 57.337 39.130 0.00 0.00 0.00 4.09
64 65 6.770746 AACTAAAATACTCACTCCGCTCTA 57.229 37.500 0.00 0.00 0.00 2.43
65 66 6.770746 ACTAAAATACTCACTCCGCTCTAA 57.229 37.500 0.00 0.00 0.00 2.10
66 67 7.166691 ACTAAAATACTCACTCCGCTCTAAA 57.833 36.000 0.00 0.00 0.00 1.85
67 68 7.034397 ACTAAAATACTCACTCCGCTCTAAAC 58.966 38.462 0.00 0.00 0.00 2.01
68 69 5.401531 AAATACTCACTCCGCTCTAAACA 57.598 39.130 0.00 0.00 0.00 2.83
69 70 4.640789 ATACTCACTCCGCTCTAAACAG 57.359 45.455 0.00 0.00 0.00 3.16
70 71 2.240279 ACTCACTCCGCTCTAAACAGT 58.760 47.619 0.00 0.00 0.00 3.55
71 72 2.628657 ACTCACTCCGCTCTAAACAGTT 59.371 45.455 0.00 0.00 0.00 3.16
72 73 3.246619 CTCACTCCGCTCTAAACAGTTC 58.753 50.000 0.00 0.00 0.00 3.01
73 74 2.626266 TCACTCCGCTCTAAACAGTTCA 59.374 45.455 0.00 0.00 0.00 3.18
74 75 3.069016 TCACTCCGCTCTAAACAGTTCAA 59.931 43.478 0.00 0.00 0.00 2.69
75 76 3.807622 CACTCCGCTCTAAACAGTTCAAA 59.192 43.478 0.00 0.00 0.00 2.69
76 77 4.272504 CACTCCGCTCTAAACAGTTCAAAA 59.727 41.667 0.00 0.00 0.00 2.44
77 78 4.272748 ACTCCGCTCTAAACAGTTCAAAAC 59.727 41.667 0.00 0.00 0.00 2.43
78 79 4.448210 TCCGCTCTAAACAGTTCAAAACT 58.552 39.130 0.00 0.00 44.06 2.66
79 80 5.603596 TCCGCTCTAAACAGTTCAAAACTA 58.396 37.500 0.00 0.00 40.46 2.24
80 81 5.694910 TCCGCTCTAAACAGTTCAAAACTAG 59.305 40.000 0.00 0.00 40.46 2.57
81 82 5.374898 CGCTCTAAACAGTTCAAAACTAGC 58.625 41.667 0.00 0.00 40.46 3.42
82 83 5.177696 CGCTCTAAACAGTTCAAAACTAGCT 59.822 40.000 0.00 0.00 40.46 3.32
83 84 6.366630 GCTCTAAACAGTTCAAAACTAGCTG 58.633 40.000 0.00 0.00 40.46 4.24
84 85 6.017852 GCTCTAAACAGTTCAAAACTAGCTGT 60.018 38.462 0.00 0.00 40.46 4.40
85 86 7.478520 TCTAAACAGTTCAAAACTAGCTGTC 57.521 36.000 0.00 0.00 40.46 3.51
86 87 7.272978 TCTAAACAGTTCAAAACTAGCTGTCT 58.727 34.615 0.00 0.00 40.46 3.41
87 88 6.759497 AAACAGTTCAAAACTAGCTGTCTT 57.241 33.333 0.00 0.00 40.46 3.01
88 89 7.859325 AAACAGTTCAAAACTAGCTGTCTTA 57.141 32.000 0.00 0.00 40.46 2.10
89 90 7.859325 AACAGTTCAAAACTAGCTGTCTTAA 57.141 32.000 0.00 0.00 40.46 1.85
90 91 7.859325 ACAGTTCAAAACTAGCTGTCTTAAA 57.141 32.000 0.00 0.00 40.46 1.52
91 92 8.451908 ACAGTTCAAAACTAGCTGTCTTAAAT 57.548 30.769 0.00 0.00 40.46 1.40
92 93 8.345565 ACAGTTCAAAACTAGCTGTCTTAAATG 58.654 33.333 0.00 0.00 40.46 2.32
93 94 8.345565 CAGTTCAAAACTAGCTGTCTTAAATGT 58.654 33.333 0.00 0.00 40.46 2.71
94 95 8.560374 AGTTCAAAACTAGCTGTCTTAAATGTC 58.440 33.333 0.00 0.00 40.69 3.06
95 96 8.560374 GTTCAAAACTAGCTGTCTTAAATGTCT 58.440 33.333 0.00 0.00 0.00 3.41
96 97 8.677148 TCAAAACTAGCTGTCTTAAATGTCTT 57.323 30.769 0.00 0.00 0.00 3.01
97 98 9.772973 TCAAAACTAGCTGTCTTAAATGTCTTA 57.227 29.630 0.00 0.00 0.00 2.10
114 115 7.611213 ATGTCTTATAAAAACGAACAGAGGG 57.389 36.000 0.00 0.00 0.00 4.30
115 116 6.761312 TGTCTTATAAAAACGAACAGAGGGA 58.239 36.000 0.00 0.00 0.00 4.20
116 117 6.872020 TGTCTTATAAAAACGAACAGAGGGAG 59.128 38.462 0.00 0.00 0.00 4.30
124 125 4.457834 ACGAACAGAGGGAGTATTTCAG 57.542 45.455 0.00 0.00 0.00 3.02
180 181 1.194218 TGATGAAGGATGAGCGGACA 58.806 50.000 0.00 0.00 0.00 4.02
192 193 1.063174 GAGCGGACAATCATCACAAGC 59.937 52.381 0.00 0.00 0.00 4.01
200 201 0.523072 ATCATCACAAGCGGTTGCAC 59.477 50.000 26.22 0.00 46.23 4.57
219 220 3.747193 CACTAAAGTTATGTGCGCCTTG 58.253 45.455 4.18 0.00 0.00 3.61
221 222 1.904287 AAAGTTATGTGCGCCTTGGA 58.096 45.000 4.18 0.00 0.00 3.53
222 223 1.165270 AAGTTATGTGCGCCTTGGAC 58.835 50.000 4.18 0.00 39.78 4.02
229 230 0.955428 GTGCGCCTTGGACATGAAGA 60.955 55.000 4.18 0.00 39.04 2.87
230 231 0.035152 TGCGCCTTGGACATGAAGAT 60.035 50.000 4.18 0.00 0.00 2.40
260 261 5.741388 ATATGGTCATTCAACTTCTTCGC 57.259 39.130 0.00 0.00 0.00 4.70
264 265 3.371285 GGTCATTCAACTTCTTCGCCTAC 59.629 47.826 0.00 0.00 0.00 3.18
275 944 1.944024 CTTCGCCTACACCAACAACAA 59.056 47.619 0.00 0.00 0.00 2.83
278 947 2.952978 TCGCCTACACCAACAACAAAAT 59.047 40.909 0.00 0.00 0.00 1.82
287 956 4.785561 CACCAACAACAAAATGTTTTTCGC 59.214 37.500 0.00 0.00 41.44 4.70
293 962 5.290885 ACAACAAAATGTTTTTCGCCTCTTC 59.709 36.000 0.00 0.00 38.77 2.87
294 963 5.262588 ACAAAATGTTTTTCGCCTCTTCT 57.737 34.783 0.00 0.00 0.00 2.85
300 969 4.827692 TGTTTTTCGCCTCTTCTATGCTA 58.172 39.130 0.00 0.00 0.00 3.49
305 974 5.378292 TTCGCCTCTTCTATGCTACTATG 57.622 43.478 0.00 0.00 0.00 2.23
306 975 3.759086 TCGCCTCTTCTATGCTACTATGG 59.241 47.826 0.00 0.00 0.00 2.74
307 976 3.508012 CGCCTCTTCTATGCTACTATGGT 59.492 47.826 0.00 0.00 0.00 3.55
308 977 4.021894 CGCCTCTTCTATGCTACTATGGTT 60.022 45.833 0.00 0.00 0.00 3.67
309 978 5.474825 GCCTCTTCTATGCTACTATGGTTC 58.525 45.833 0.00 0.00 0.00 3.62
310 979 5.245075 GCCTCTTCTATGCTACTATGGTTCT 59.755 44.000 0.00 0.00 0.00 3.01
311 980 6.239458 GCCTCTTCTATGCTACTATGGTTCTT 60.239 42.308 0.00 0.00 0.00 2.52
312 981 7.151308 CCTCTTCTATGCTACTATGGTTCTTG 58.849 42.308 0.00 0.00 0.00 3.02
313 982 7.201956 CCTCTTCTATGCTACTATGGTTCTTGT 60.202 40.741 0.00 0.00 0.00 3.16
314 983 8.079211 TCTTCTATGCTACTATGGTTCTTGTT 57.921 34.615 0.00 0.00 0.00 2.83
315 984 8.540388 TCTTCTATGCTACTATGGTTCTTGTTT 58.460 33.333 0.00 0.00 0.00 2.83
316 985 9.167311 CTTCTATGCTACTATGGTTCTTGTTTT 57.833 33.333 0.00 0.00 0.00 2.43
318 987 9.817809 TCTATGCTACTATGGTTCTTGTTTTAG 57.182 33.333 0.00 0.00 0.00 1.85
319 988 9.817809 CTATGCTACTATGGTTCTTGTTTTAGA 57.182 33.333 0.00 0.00 0.00 2.10
321 990 9.686683 ATGCTACTATGGTTCTTGTTTTAGAAT 57.313 29.630 0.00 0.00 36.60 2.40
322 991 8.946085 TGCTACTATGGTTCTTGTTTTAGAATG 58.054 33.333 0.00 0.00 36.60 2.67
323 992 8.947115 GCTACTATGGTTCTTGTTTTAGAATGT 58.053 33.333 0.00 0.00 36.60 2.71
329 998 9.965824 ATGGTTCTTGTTTTAGAATGTTAGTTG 57.034 29.630 0.00 0.00 36.60 3.16
330 999 9.179909 TGGTTCTTGTTTTAGAATGTTAGTTGA 57.820 29.630 0.00 0.00 36.60 3.18
341 1010 9.996554 TTAGAATGTTAGTTGATCTGAACTTGA 57.003 29.630 3.97 0.00 37.38 3.02
342 1011 8.908786 AGAATGTTAGTTGATCTGAACTTGAA 57.091 30.769 3.97 0.00 37.38 2.69
343 1012 8.778358 AGAATGTTAGTTGATCTGAACTTGAAC 58.222 33.333 3.97 4.76 37.38 3.18
344 1013 8.682936 AATGTTAGTTGATCTGAACTTGAACT 57.317 30.769 3.97 0.72 37.38 3.01
345 1014 8.682936 ATGTTAGTTGATCTGAACTTGAACTT 57.317 30.769 3.97 0.88 37.38 2.66
346 1015 8.506168 TGTTAGTTGATCTGAACTTGAACTTT 57.494 30.769 3.97 0.00 37.38 2.66
347 1016 8.956426 TGTTAGTTGATCTGAACTTGAACTTTT 58.044 29.630 3.97 0.00 37.38 2.27
351 1020 8.624776 AGTTGATCTGAACTTGAACTTTTAAGG 58.375 33.333 0.00 0.00 31.92 2.69
352 1021 8.406297 GTTGATCTGAACTTGAACTTTTAAGGT 58.594 33.333 0.00 0.00 0.00 3.50
353 1022 8.154649 TGATCTGAACTTGAACTTTTAAGGTC 57.845 34.615 4.91 4.91 43.11 3.85
354 1023 7.993183 TGATCTGAACTTGAACTTTTAAGGTCT 59.007 33.333 11.54 0.00 43.21 3.85
355 1024 7.553881 TCTGAACTTGAACTTTTAAGGTCTG 57.446 36.000 11.54 10.95 43.21 3.51
356 1025 7.110155 TCTGAACTTGAACTTTTAAGGTCTGT 58.890 34.615 11.54 5.34 43.21 3.41
357 1026 8.262227 TCTGAACTTGAACTTTTAAGGTCTGTA 58.738 33.333 11.54 1.91 43.21 2.74
358 1027 8.205131 TGAACTTGAACTTTTAAGGTCTGTAC 57.795 34.615 11.54 0.00 43.21 2.90
359 1028 7.825270 TGAACTTGAACTTTTAAGGTCTGTACA 59.175 33.333 11.54 0.00 43.21 2.90
360 1029 7.549615 ACTTGAACTTTTAAGGTCTGTACAC 57.450 36.000 8.83 0.00 43.21 2.90
361 1030 6.541278 ACTTGAACTTTTAAGGTCTGTACACC 59.459 38.462 8.83 0.00 43.21 4.16
362 1031 5.370679 TGAACTTTTAAGGTCTGTACACCC 58.629 41.667 8.83 0.00 43.21 4.61
363 1032 4.362470 ACTTTTAAGGTCTGTACACCCC 57.638 45.455 0.00 0.00 37.09 4.95
364 1033 3.978672 ACTTTTAAGGTCTGTACACCCCT 59.021 43.478 3.22 3.22 37.09 4.79
365 1034 4.041321 ACTTTTAAGGTCTGTACACCCCTC 59.959 45.833 8.64 0.00 37.09 4.30
366 1035 1.843368 TAAGGTCTGTACACCCCTCG 58.157 55.000 8.64 0.00 37.09 4.63
367 1036 0.178941 AAGGTCTGTACACCCCTCGT 60.179 55.000 8.64 0.00 37.09 4.18
368 1037 0.700564 AGGTCTGTACACCCCTCGTA 59.299 55.000 3.22 0.00 37.09 3.43
369 1038 1.076024 AGGTCTGTACACCCCTCGTAA 59.924 52.381 3.22 0.00 37.09 3.18
370 1039 1.475682 GGTCTGTACACCCCTCGTAAG 59.524 57.143 0.00 0.00 0.00 2.34
371 1040 1.475682 GTCTGTACACCCCTCGTAAGG 59.524 57.143 0.00 0.00 42.95 2.69
386 1055 6.572167 CTCGTAAGGGGTTAGTTATCTAGG 57.428 45.833 0.00 0.00 38.47 3.02
387 1056 5.388654 TCGTAAGGGGTTAGTTATCTAGGG 58.611 45.833 0.00 0.00 38.47 3.53
388 1057 5.134339 TCGTAAGGGGTTAGTTATCTAGGGA 59.866 44.000 0.00 0.00 38.47 4.20
389 1058 5.476254 CGTAAGGGGTTAGTTATCTAGGGAG 59.524 48.000 0.00 0.00 0.00 4.30
390 1059 3.859370 AGGGGTTAGTTATCTAGGGAGC 58.141 50.000 0.00 0.00 0.00 4.70
391 1060 3.471690 AGGGGTTAGTTATCTAGGGAGCT 59.528 47.826 0.00 0.00 0.00 4.09
392 1061 3.579151 GGGGTTAGTTATCTAGGGAGCTG 59.421 52.174 0.00 0.00 0.00 4.24
393 1062 4.481072 GGGTTAGTTATCTAGGGAGCTGA 58.519 47.826 0.00 0.00 0.00 4.26
394 1063 4.900054 GGGTTAGTTATCTAGGGAGCTGAA 59.100 45.833 0.00 0.00 0.00 3.02
395 1064 5.221481 GGGTTAGTTATCTAGGGAGCTGAAC 60.221 48.000 0.00 0.00 0.00 3.18
396 1065 5.599242 GGTTAGTTATCTAGGGAGCTGAACT 59.401 44.000 0.00 0.00 0.00 3.01
397 1066 6.098552 GGTTAGTTATCTAGGGAGCTGAACTT 59.901 42.308 0.00 0.00 0.00 2.66
398 1067 5.606348 AGTTATCTAGGGAGCTGAACTTG 57.394 43.478 0.00 0.00 0.00 3.16
399 1068 2.998316 ATCTAGGGAGCTGAACTTGC 57.002 50.000 0.00 0.00 0.00 4.01
400 1069 1.944177 TCTAGGGAGCTGAACTTGCT 58.056 50.000 0.00 0.00 44.24 3.91
401 1070 3.101643 TCTAGGGAGCTGAACTTGCTA 57.898 47.619 0.00 0.00 41.30 3.49
402 1071 2.761208 TCTAGGGAGCTGAACTTGCTAC 59.239 50.000 0.00 0.00 41.30 3.58
406 1075 3.611766 GGAGCTGAACTTGCTACCTAA 57.388 47.619 0.00 0.00 41.30 2.69
407 1076 3.939066 GGAGCTGAACTTGCTACCTAAA 58.061 45.455 0.00 0.00 41.30 1.85
408 1077 3.685272 GGAGCTGAACTTGCTACCTAAAC 59.315 47.826 0.00 0.00 41.30 2.01
409 1078 4.563786 GGAGCTGAACTTGCTACCTAAACT 60.564 45.833 0.00 0.00 41.30 2.66
410 1079 4.974399 AGCTGAACTTGCTACCTAAACTT 58.026 39.130 0.00 0.00 39.21 2.66
411 1080 4.757149 AGCTGAACTTGCTACCTAAACTTG 59.243 41.667 0.00 0.00 39.21 3.16
412 1081 4.515567 GCTGAACTTGCTACCTAAACTTGT 59.484 41.667 0.00 0.00 0.00 3.16
413 1082 5.008712 GCTGAACTTGCTACCTAAACTTGTT 59.991 40.000 0.00 0.00 0.00 2.83
414 1083 6.613755 TGAACTTGCTACCTAAACTTGTTC 57.386 37.500 0.00 0.00 33.94 3.18
415 1084 6.354130 TGAACTTGCTACCTAAACTTGTTCT 58.646 36.000 0.00 0.00 34.31 3.01
416 1085 6.482308 TGAACTTGCTACCTAAACTTGTTCTC 59.518 38.462 0.00 0.00 34.31 2.87
417 1086 4.989168 ACTTGCTACCTAAACTTGTTCTCG 59.011 41.667 0.00 0.00 0.00 4.04
418 1087 4.595762 TGCTACCTAAACTTGTTCTCGT 57.404 40.909 0.00 0.00 0.00 4.18
419 1088 4.304110 TGCTACCTAAACTTGTTCTCGTG 58.696 43.478 0.00 0.00 0.00 4.35
420 1089 4.202182 TGCTACCTAAACTTGTTCTCGTGT 60.202 41.667 0.00 0.00 0.00 4.49
421 1090 4.150098 GCTACCTAAACTTGTTCTCGTGTG 59.850 45.833 0.00 0.00 0.00 3.82
422 1091 4.133013 ACCTAAACTTGTTCTCGTGTGT 57.867 40.909 0.00 0.00 0.00 3.72
423 1092 4.510571 ACCTAAACTTGTTCTCGTGTGTT 58.489 39.130 0.00 0.00 0.00 3.32
424 1093 4.331717 ACCTAAACTTGTTCTCGTGTGTTG 59.668 41.667 0.00 0.00 0.00 3.33
425 1094 3.757745 AAACTTGTTCTCGTGTGTTGG 57.242 42.857 0.00 0.00 0.00 3.77
426 1095 2.396590 ACTTGTTCTCGTGTGTTGGT 57.603 45.000 0.00 0.00 0.00 3.67
427 1096 2.706890 ACTTGTTCTCGTGTGTTGGTT 58.293 42.857 0.00 0.00 0.00 3.67
428 1097 3.078837 ACTTGTTCTCGTGTGTTGGTTT 58.921 40.909 0.00 0.00 0.00 3.27
429 1098 3.126343 ACTTGTTCTCGTGTGTTGGTTTC 59.874 43.478 0.00 0.00 0.00 2.78
430 1099 1.661617 TGTTCTCGTGTGTTGGTTTCG 59.338 47.619 0.00 0.00 0.00 3.46
431 1100 1.662122 GTTCTCGTGTGTTGGTTTCGT 59.338 47.619 0.00 0.00 0.00 3.85
432 1101 2.012937 TCTCGTGTGTTGGTTTCGTT 57.987 45.000 0.00 0.00 0.00 3.85
433 1102 3.162202 TCTCGTGTGTTGGTTTCGTTA 57.838 42.857 0.00 0.00 0.00 3.18
434 1103 3.519579 TCTCGTGTGTTGGTTTCGTTAA 58.480 40.909 0.00 0.00 0.00 2.01
435 1104 4.121317 TCTCGTGTGTTGGTTTCGTTAAT 58.879 39.130 0.00 0.00 0.00 1.40
436 1105 4.025563 TCTCGTGTGTTGGTTTCGTTAATG 60.026 41.667 0.00 0.00 0.00 1.90
437 1106 3.869832 TCGTGTGTTGGTTTCGTTAATGA 59.130 39.130 0.00 0.00 0.00 2.57
438 1107 4.331992 TCGTGTGTTGGTTTCGTTAATGAA 59.668 37.500 6.00 6.00 0.00 2.57
439 1108 4.668837 CGTGTGTTGGTTTCGTTAATGAAG 59.331 41.667 9.94 0.00 0.00 3.02
440 1109 5.575019 GTGTGTTGGTTTCGTTAATGAAGT 58.425 37.500 9.94 0.00 0.00 3.01
441 1110 6.031471 GTGTGTTGGTTTCGTTAATGAAGTT 58.969 36.000 9.94 0.00 0.00 2.66
442 1111 6.020995 GTGTGTTGGTTTCGTTAATGAAGTTG 60.021 38.462 9.94 0.00 0.00 3.16
443 1112 5.457473 GTGTTGGTTTCGTTAATGAAGTTGG 59.543 40.000 9.94 0.00 0.00 3.77
444 1113 5.357314 TGTTGGTTTCGTTAATGAAGTTGGA 59.643 36.000 9.94 0.00 0.00 3.53
445 1114 5.682943 TGGTTTCGTTAATGAAGTTGGAG 57.317 39.130 9.94 0.00 0.00 3.86
446 1115 4.517453 TGGTTTCGTTAATGAAGTTGGAGG 59.483 41.667 9.94 0.00 0.00 4.30
447 1116 4.082949 GGTTTCGTTAATGAAGTTGGAGGG 60.083 45.833 9.94 0.00 0.00 4.30
448 1117 3.343941 TCGTTAATGAAGTTGGAGGGG 57.656 47.619 0.00 0.00 0.00 4.79
449 1118 2.907696 TCGTTAATGAAGTTGGAGGGGA 59.092 45.455 0.00 0.00 0.00 4.81
450 1119 3.055385 TCGTTAATGAAGTTGGAGGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
451 1120 3.307480 CGTTAATGAAGTTGGAGGGGAGT 60.307 47.826 0.00 0.00 0.00 3.85
452 1121 4.663334 GTTAATGAAGTTGGAGGGGAGTT 58.337 43.478 0.00 0.00 0.00 3.01
453 1122 3.441500 AATGAAGTTGGAGGGGAGTTC 57.558 47.619 0.00 0.00 0.00 3.01
454 1123 1.064825 TGAAGTTGGAGGGGAGTTCC 58.935 55.000 0.00 0.00 35.20 3.62
510 1179 2.113860 TTGGTGCTCCTGTAATGCTC 57.886 50.000 6.34 0.00 34.23 4.26
538 1207 9.716507 AACGTATGCTATTGTGATTTGAATTAC 57.283 29.630 0.00 0.00 0.00 1.89
548 1217 5.160641 GTGATTTGAATTACGCAATGGTGT 58.839 37.500 0.00 0.00 41.49 4.16
686 1360 1.663388 TGCTGGTCGTTACAGTGCG 60.663 57.895 0.00 0.00 38.22 5.34
711 1385 5.286558 CACGGTATTCAAAAACAAAACGTGT 59.713 36.000 0.00 0.00 44.64 4.49
747 1421 2.153627 CACATGCTTTAACTGCGTTTGC 59.846 45.455 0.00 3.98 43.20 3.68
822 1510 1.665679 CATGCCGTAATGCTCGAAACT 59.334 47.619 0.00 0.00 0.00 2.66
836 1524 5.123936 GCTCGAAACTCAGGGGTTAATTAT 58.876 41.667 0.00 0.00 0.00 1.28
861 1555 0.456628 GCTCTCTTCCTCCGTGTACC 59.543 60.000 0.00 0.00 0.00 3.34
866 1560 3.291101 TTCCTCCGTGTACCGCAGC 62.291 63.158 0.00 0.00 34.38 5.25
896 1590 4.156739 GCCTACAACTTGTACCGTACTAGT 59.843 45.833 16.96 16.96 44.51 2.57
897 1591 5.354234 GCCTACAACTTGTACCGTACTAGTA 59.646 44.000 21.19 9.21 42.42 1.82
898 1592 6.038714 GCCTACAACTTGTACCGTACTAGTAT 59.961 42.308 21.19 16.04 42.42 2.12
899 1593 7.634522 CCTACAACTTGTACCGTACTAGTATC 58.365 42.308 21.19 0.00 42.42 2.24
900 1594 7.497249 CCTACAACTTGTACCGTACTAGTATCT 59.503 40.741 21.19 11.80 42.42 1.98
901 1595 7.693969 ACAACTTGTACCGTACTAGTATCTT 57.306 36.000 21.19 7.52 42.42 2.40
902 1596 7.533426 ACAACTTGTACCGTACTAGTATCTTG 58.467 38.462 21.19 17.94 42.42 3.02
903 1597 6.690194 ACTTGTACCGTACTAGTATCTTGG 57.310 41.667 20.01 8.58 41.67 3.61
908 1602 4.275810 ACCGTACTAGTATCTTGGCAAGA 58.724 43.478 30.29 30.29 42.69 3.02
914 1608 7.644551 CGTACTAGTATCTTGGCAAGAAGTAAG 59.355 40.741 31.57 27.30 41.63 2.34
916 1610 7.548967 ACTAGTATCTTGGCAAGAAGTAAGAC 58.451 38.462 31.57 20.65 41.63 3.01
925 1619 3.512680 CAAGAAGTAAGACCGATCGCTT 58.487 45.455 10.32 11.24 0.00 4.68
940 1634 2.981875 TCGCTTCAAAAAGTTTCTCGC 58.018 42.857 0.00 0.00 34.79 5.03
957 1651 0.583568 CGCTCGAGAGTTCGTACGTC 60.584 60.000 18.75 5.67 46.72 4.34
967 1661 4.569966 AGAGTTCGTACGTCTCGATTACAT 59.430 41.667 24.69 11.99 37.18 2.29
974 1668 2.034789 CGTCTCGATTACATTCCGTCG 58.965 52.381 0.00 0.00 35.55 5.12
975 1669 2.382519 GTCTCGATTACATTCCGTCGG 58.617 52.381 4.39 4.39 35.01 4.79
1453 2166 3.599285 CTTAACCCGCACCGCCTCA 62.599 63.158 0.00 0.00 0.00 3.86
1594 2319 2.962786 CCACGTTTGGCGACACGA 60.963 61.111 14.44 0.00 44.77 4.35
1854 2616 1.006571 CGTGGACGTGCTGTTAGGT 60.007 57.895 8.99 0.00 34.11 3.08
1908 2673 0.622136 TCATCCTGGACATGCTTGCT 59.378 50.000 0.00 0.00 0.00 3.91
2331 3120 2.285743 GGGAGGAGAGGTTGCCCT 60.286 66.667 0.00 0.00 46.66 5.19
2405 3194 1.178276 CACTTCGACTGGGAGCTAGT 58.822 55.000 0.00 0.00 0.00 2.57
2544 3336 3.601443 AGCGTCTCTACATGCTTCTTT 57.399 42.857 0.00 0.00 32.89 2.52
2546 3338 4.319177 AGCGTCTCTACATGCTTCTTTTT 58.681 39.130 0.00 0.00 32.89 1.94
2547 3339 4.390297 AGCGTCTCTACATGCTTCTTTTTC 59.610 41.667 0.00 0.00 32.89 2.29
2548 3340 4.390297 GCGTCTCTACATGCTTCTTTTTCT 59.610 41.667 0.00 0.00 0.00 2.52
2549 3341 5.577164 GCGTCTCTACATGCTTCTTTTTCTA 59.423 40.000 0.00 0.00 0.00 2.10
2550 3342 6.090898 GCGTCTCTACATGCTTCTTTTTCTAA 59.909 38.462 0.00 0.00 0.00 2.10
2551 3343 7.670916 CGTCTCTACATGCTTCTTTTTCTAAG 58.329 38.462 0.00 0.00 0.00 2.18
2552 3344 7.329717 CGTCTCTACATGCTTCTTTTTCTAAGT 59.670 37.037 0.00 0.00 0.00 2.24
2553 3345 9.640963 GTCTCTACATGCTTCTTTTTCTAAGTA 57.359 33.333 0.00 0.00 0.00 2.24
2607 3399 8.234136 TCATTATCGACCAAGTCTAGTAATGT 57.766 34.615 15.36 0.00 34.47 2.71
2608 3400 9.346005 TCATTATCGACCAAGTCTAGTAATGTA 57.654 33.333 15.36 7.11 34.47 2.29
2630 3422 7.506114 TGTATAGTACCAAGATTCCCAATGTC 58.494 38.462 0.00 0.00 0.00 3.06
2749 3543 4.202461 GGGACATGGCCTTTCAGTATCATA 60.202 45.833 19.55 0.00 0.00 2.15
2778 3572 1.328439 CACTCTCTGTGTACGCGTTC 58.672 55.000 20.78 14.31 41.53 3.95
2793 3587 2.607635 CGCGTTCATAGCACCACTAATT 59.392 45.455 0.00 0.00 33.57 1.40
2895 3689 2.985847 AAGCCTGCGGGTTTGAGC 60.986 61.111 13.57 0.00 40.84 4.26
2896 3690 3.790416 AAGCCTGCGGGTTTGAGCA 62.790 57.895 13.57 0.00 40.84 4.26
2897 3691 3.064324 GCCTGCGGGTTTGAGCAT 61.064 61.111 14.55 0.00 42.95 3.79
2898 3692 1.748879 GCCTGCGGGTTTGAGCATA 60.749 57.895 14.55 0.00 42.95 3.14
2899 3693 1.103398 GCCTGCGGGTTTGAGCATAT 61.103 55.000 14.55 0.00 42.95 1.78
2900 3694 1.813862 GCCTGCGGGTTTGAGCATATA 60.814 52.381 14.55 0.00 42.95 0.86
2901 3695 1.873591 CCTGCGGGTTTGAGCATATAC 59.126 52.381 2.29 0.00 42.95 1.47
2902 3696 1.873591 CTGCGGGTTTGAGCATATACC 59.126 52.381 0.00 0.00 42.95 2.73
2903 3697 0.865769 GCGGGTTTGAGCATATACCG 59.134 55.000 0.00 0.00 42.47 4.02
2904 3698 0.865769 CGGGTTTGAGCATATACCGC 59.134 55.000 0.00 0.00 33.01 5.68
2905 3699 1.808512 CGGGTTTGAGCATATACCGCA 60.809 52.381 0.00 0.00 33.01 5.69
2906 3700 1.602377 GGGTTTGAGCATATACCGCAC 59.398 52.381 0.00 0.00 0.00 5.34
2907 3701 1.260561 GGTTTGAGCATATACCGCACG 59.739 52.381 0.00 0.00 0.00 5.34
2908 3702 1.931172 GTTTGAGCATATACCGCACGT 59.069 47.619 0.00 0.00 0.00 4.49
2909 3703 3.117794 GTTTGAGCATATACCGCACGTA 58.882 45.455 0.00 0.00 0.00 3.57
2910 3704 2.410785 TGAGCATATACCGCACGTAC 57.589 50.000 0.00 0.00 0.00 3.67
2911 3705 1.677052 TGAGCATATACCGCACGTACA 59.323 47.619 0.00 0.00 0.00 2.90
2912 3706 2.099427 TGAGCATATACCGCACGTACAA 59.901 45.455 0.00 0.00 0.00 2.41
2913 3707 3.243602 TGAGCATATACCGCACGTACAAT 60.244 43.478 0.00 0.00 0.00 2.71
2914 3708 3.057019 AGCATATACCGCACGTACAATG 58.943 45.455 0.00 0.00 31.30 2.82
2915 3709 2.798283 GCATATACCGCACGTACAATGT 59.202 45.455 0.00 0.00 31.01 2.71
2916 3710 3.982701 GCATATACCGCACGTACAATGTA 59.017 43.478 0.00 0.00 31.01 2.29
2917 3711 4.445052 GCATATACCGCACGTACAATGTAA 59.555 41.667 0.00 0.00 31.01 2.41
2918 3712 5.119588 GCATATACCGCACGTACAATGTAAT 59.880 40.000 0.00 0.00 31.01 1.89
2919 3713 6.347079 GCATATACCGCACGTACAATGTAATT 60.347 38.462 0.00 0.00 36.63 1.40
2920 3714 7.569297 CATATACCGCACGTACAATGTAATTT 58.431 34.615 0.00 0.00 31.22 1.82
2921 3715 4.752661 ACCGCACGTACAATGTAATTTT 57.247 36.364 0.00 0.00 31.22 1.82
2922 3716 4.714851 ACCGCACGTACAATGTAATTTTC 58.285 39.130 0.00 0.00 31.22 2.29
2923 3717 4.213694 ACCGCACGTACAATGTAATTTTCA 59.786 37.500 0.00 0.00 31.22 2.69
2924 3718 4.551892 CCGCACGTACAATGTAATTTTCAC 59.448 41.667 0.00 0.00 31.22 3.18
2925 3719 5.379003 CGCACGTACAATGTAATTTTCACT 58.621 37.500 0.00 0.00 31.22 3.41
2926 3720 5.280446 CGCACGTACAATGTAATTTTCACTG 59.720 40.000 0.00 0.00 31.22 3.66
2927 3721 5.567534 GCACGTACAATGTAATTTTCACTGG 59.432 40.000 0.00 0.00 31.22 4.00
2928 3722 5.567534 CACGTACAATGTAATTTTCACTGGC 59.432 40.000 0.00 0.00 31.22 4.85
2936 3730 3.715628 AATTTTCACTGGCAGTGTGTC 57.284 42.857 38.27 0.00 46.03 3.67
2942 3736 4.182433 TGGCAGTGTGTCGGGCAA 62.182 61.111 0.00 0.00 42.68 4.52
2943 3737 2.672996 GGCAGTGTGTCGGGCAAT 60.673 61.111 0.00 0.00 36.86 3.56
2944 3738 2.690778 GGCAGTGTGTCGGGCAATC 61.691 63.158 0.00 0.00 36.86 2.67
2945 3739 1.672356 GCAGTGTGTCGGGCAATCT 60.672 57.895 0.00 0.00 0.00 2.40
2946 3740 1.237285 GCAGTGTGTCGGGCAATCTT 61.237 55.000 0.00 0.00 0.00 2.40
2947 3741 1.943968 GCAGTGTGTCGGGCAATCTTA 60.944 52.381 0.00 0.00 0.00 2.10
2948 3742 2.422597 CAGTGTGTCGGGCAATCTTAA 58.577 47.619 0.00 0.00 0.00 1.85
2949 3743 2.811431 CAGTGTGTCGGGCAATCTTAAA 59.189 45.455 0.00 0.00 0.00 1.52
2950 3744 3.074412 AGTGTGTCGGGCAATCTTAAAG 58.926 45.455 0.00 0.00 0.00 1.85
2951 3745 1.810151 TGTGTCGGGCAATCTTAAAGC 59.190 47.619 0.00 0.00 0.00 3.51
2952 3746 1.810151 GTGTCGGGCAATCTTAAAGCA 59.190 47.619 0.00 0.00 0.00 3.91
2953 3747 2.423538 GTGTCGGGCAATCTTAAAGCAT 59.576 45.455 0.00 0.00 0.00 3.79
2954 3748 2.682856 TGTCGGGCAATCTTAAAGCATC 59.317 45.455 0.00 0.00 0.00 3.91
2955 3749 2.945668 GTCGGGCAATCTTAAAGCATCT 59.054 45.455 0.00 0.00 0.00 2.90
2956 3750 4.127171 GTCGGGCAATCTTAAAGCATCTA 58.873 43.478 0.00 0.00 0.00 1.98
2957 3751 4.024809 GTCGGGCAATCTTAAAGCATCTAC 60.025 45.833 0.00 0.00 0.00 2.59
2958 3752 3.059597 CGGGCAATCTTAAAGCATCTACG 60.060 47.826 0.00 0.00 0.00 3.51
2959 3753 3.251004 GGGCAATCTTAAAGCATCTACGG 59.749 47.826 0.00 0.00 0.00 4.02
2960 3754 3.304057 GGCAATCTTAAAGCATCTACGGC 60.304 47.826 0.00 0.00 0.00 5.68
2961 3755 3.304057 GCAATCTTAAAGCATCTACGGCC 60.304 47.826 0.00 0.00 0.00 6.13
2962 3756 2.614829 TCTTAAAGCATCTACGGCCC 57.385 50.000 0.00 0.00 0.00 5.80
2963 3757 1.202486 TCTTAAAGCATCTACGGCCCG 60.202 52.381 0.00 0.00 0.00 6.13
2964 3758 0.179067 TTAAAGCATCTACGGCCCGG 60.179 55.000 8.57 0.00 0.00 5.73
2965 3759 1.332144 TAAAGCATCTACGGCCCGGT 61.332 55.000 8.57 0.00 0.00 5.28
2966 3760 2.869503 AAAGCATCTACGGCCCGGTG 62.870 60.000 8.57 1.67 0.00 4.94
2985 3779 2.234908 GTGCCTTAGATCCGCCTCATAT 59.765 50.000 0.00 0.00 0.00 1.78
2987 3781 2.898705 CCTTAGATCCGCCTCATATGC 58.101 52.381 0.00 0.00 0.00 3.14
2988 3782 2.499289 CCTTAGATCCGCCTCATATGCT 59.501 50.000 0.00 0.00 0.00 3.79
2989 3783 3.430098 CCTTAGATCCGCCTCATATGCTC 60.430 52.174 0.00 0.00 0.00 4.26
2990 3784 0.901124 AGATCCGCCTCATATGCTCC 59.099 55.000 0.00 0.00 0.00 4.70
2992 3786 1.892819 ATCCGCCTCATATGCTCCGG 61.893 60.000 16.62 16.62 37.21 5.14
2993 3787 2.740055 CGCCTCATATGCTCCGGC 60.740 66.667 0.00 12.34 37.40 6.13
2996 3790 2.574018 CCTCATATGCTCCGGCGGA 61.574 63.158 29.14 29.14 42.25 5.54
2997 3791 1.367471 CTCATATGCTCCGGCGGAA 59.633 57.895 30.59 17.11 42.25 4.30
2999 3793 1.204704 CTCATATGCTCCGGCGGAATA 59.795 52.381 30.59 24.35 42.25 1.75
3027 3821 6.513066 CGGTTGTAAAATTTTAACCCAGACGA 60.513 38.462 21.79 6.75 39.46 4.20
3083 3878 0.475906 GCACCCCTCATATTCAGCCT 59.524 55.000 0.00 0.00 0.00 4.58
3087 3882 4.792068 CACCCCTCATATTCAGCCTAAAA 58.208 43.478 0.00 0.00 0.00 1.52
3090 3885 6.324770 CACCCCTCATATTCAGCCTAAAAATT 59.675 38.462 0.00 0.00 0.00 1.82
3092 3887 6.324770 CCCCTCATATTCAGCCTAAAAATTGT 59.675 38.462 0.00 0.00 0.00 2.71
3098 3893 2.227865 TCAGCCTAAAAATTGTGCGGAC 59.772 45.455 0.00 0.00 0.00 4.79
3104 3899 0.037419 AAAATTGTGCGGACATGGGC 60.037 50.000 11.62 0.00 30.13 5.36
3141 3939 2.944429 CGTCGTCACGTCAGACCT 59.056 61.111 0.00 0.00 41.42 3.85
3143 3941 1.729838 GTCGTCACGTCAGACCTGC 60.730 63.158 0.00 0.00 35.07 4.85
3176 3976 4.506625 GCCCAACTGACCCAGCATATATTA 60.507 45.833 0.00 0.00 34.37 0.98
3179 3979 6.299141 CCAACTGACCCAGCATATATTACTT 58.701 40.000 0.00 0.00 34.37 2.24
3225 4025 0.472734 AGCCACTTCACTCCACTCCT 60.473 55.000 0.00 0.00 0.00 3.69
3240 4050 4.101448 CCTCTCCGCCACCCAAGG 62.101 72.222 0.00 0.00 0.00 3.61
3249 4059 3.246112 CACCCAAGGTCGTCCCCA 61.246 66.667 0.00 0.00 31.02 4.96
3250 4060 2.204090 ACCCAAGGTCGTCCCCAT 60.204 61.111 0.00 0.00 0.00 4.00
3262 4080 2.758327 CCCCATCACCGTCTCCGA 60.758 66.667 0.00 0.00 35.63 4.55
3267 4085 0.455815 CATCACCGTCTCCGACATGA 59.544 55.000 0.00 0.00 33.76 3.07
3295 4113 1.196012 GGATCCGAGTCCTTCACCTT 58.804 55.000 0.00 0.00 35.32 3.50
3349 4168 1.107538 CCGAAGAGGAGATGGCCGTA 61.108 60.000 0.00 0.00 45.00 4.02
3350 4169 0.962489 CGAAGAGGAGATGGCCGTAT 59.038 55.000 0.00 0.00 0.00 3.06
3411 4230 2.125633 GCGGTCGGACTTCTTCCC 60.126 66.667 8.23 0.00 42.27 3.97
3428 4247 2.546494 CCTCGGGAATCCATTGCGC 61.546 63.158 0.00 0.00 0.00 6.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.814107 ACACCAATCATGTTGTTCAATGTAATC 59.186 33.333 0.00 0.00 0.00 1.75
5 6 6.647334 ACACCAATCATGTTGTTCAATGTA 57.353 33.333 0.00 0.00 0.00 2.29
6 7 5.534207 ACACCAATCATGTTGTTCAATGT 57.466 34.783 0.00 0.00 0.00 2.71
15 16 1.069296 CGCGTCAACACCAATCATGTT 60.069 47.619 0.00 0.00 40.95 2.71
16 17 0.516877 CGCGTCAACACCAATCATGT 59.483 50.000 0.00 0.00 0.00 3.21
17 18 0.795698 TCGCGTCAACACCAATCATG 59.204 50.000 5.77 0.00 0.00 3.07
18 19 1.518325 TTCGCGTCAACACCAATCAT 58.482 45.000 5.77 0.00 0.00 2.45
19 20 1.518325 ATTCGCGTCAACACCAATCA 58.482 45.000 5.77 0.00 0.00 2.57
20 21 3.733024 TTATTCGCGTCAACACCAATC 57.267 42.857 5.77 0.00 0.00 2.67
21 22 4.023536 AGTTTTATTCGCGTCAACACCAAT 60.024 37.500 5.77 0.00 0.00 3.16
22 23 3.312973 AGTTTTATTCGCGTCAACACCAA 59.687 39.130 5.77 0.00 0.00 3.67
23 24 2.873472 AGTTTTATTCGCGTCAACACCA 59.127 40.909 5.77 0.00 0.00 4.17
24 25 3.531262 AGTTTTATTCGCGTCAACACC 57.469 42.857 5.77 0.00 0.00 4.16
25 26 6.956393 TTTTAGTTTTATTCGCGTCAACAC 57.044 33.333 5.77 2.28 0.00 3.32
26 27 8.497554 AGTATTTTAGTTTTATTCGCGTCAACA 58.502 29.630 5.77 0.00 0.00 3.33
27 28 8.870242 AGTATTTTAGTTTTATTCGCGTCAAC 57.130 30.769 5.77 3.36 0.00 3.18
28 29 8.710551 TGAGTATTTTAGTTTTATTCGCGTCAA 58.289 29.630 5.77 0.00 0.00 3.18
29 30 8.164153 GTGAGTATTTTAGTTTTATTCGCGTCA 58.836 33.333 5.77 0.00 0.00 4.35
30 31 8.378421 AGTGAGTATTTTAGTTTTATTCGCGTC 58.622 33.333 5.77 0.00 0.00 5.19
31 32 8.248117 AGTGAGTATTTTAGTTTTATTCGCGT 57.752 30.769 5.77 0.00 0.00 6.01
32 33 7.844653 GGAGTGAGTATTTTAGTTTTATTCGCG 59.155 37.037 0.00 0.00 0.00 5.87
33 34 7.844653 CGGAGTGAGTATTTTAGTTTTATTCGC 59.155 37.037 0.00 0.00 0.00 4.70
34 35 7.844653 GCGGAGTGAGTATTTTAGTTTTATTCG 59.155 37.037 0.00 0.00 0.00 3.34
35 36 8.880750 AGCGGAGTGAGTATTTTAGTTTTATTC 58.119 33.333 0.00 0.00 0.00 1.75
36 37 8.788325 AGCGGAGTGAGTATTTTAGTTTTATT 57.212 30.769 0.00 0.00 0.00 1.40
37 38 8.258708 AGAGCGGAGTGAGTATTTTAGTTTTAT 58.741 33.333 0.00 0.00 0.00 1.40
38 39 7.609056 AGAGCGGAGTGAGTATTTTAGTTTTA 58.391 34.615 0.00 0.00 0.00 1.52
39 40 6.465084 AGAGCGGAGTGAGTATTTTAGTTTT 58.535 36.000 0.00 0.00 0.00 2.43
40 41 6.038997 AGAGCGGAGTGAGTATTTTAGTTT 57.961 37.500 0.00 0.00 0.00 2.66
41 42 5.662674 AGAGCGGAGTGAGTATTTTAGTT 57.337 39.130 0.00 0.00 0.00 2.24
42 43 6.770746 TTAGAGCGGAGTGAGTATTTTAGT 57.229 37.500 0.00 0.00 0.00 2.24
43 44 7.033791 TGTTTAGAGCGGAGTGAGTATTTTAG 58.966 38.462 0.00 0.00 0.00 1.85
44 45 6.927416 TGTTTAGAGCGGAGTGAGTATTTTA 58.073 36.000 0.00 0.00 0.00 1.52
45 46 5.790593 TGTTTAGAGCGGAGTGAGTATTTT 58.209 37.500 0.00 0.00 0.00 1.82
46 47 5.047235 ACTGTTTAGAGCGGAGTGAGTATTT 60.047 40.000 0.00 0.00 0.00 1.40
47 48 4.463186 ACTGTTTAGAGCGGAGTGAGTATT 59.537 41.667 0.00 0.00 0.00 1.89
48 49 4.017808 ACTGTTTAGAGCGGAGTGAGTAT 58.982 43.478 0.00 0.00 0.00 2.12
49 50 3.418995 ACTGTTTAGAGCGGAGTGAGTA 58.581 45.455 0.00 0.00 0.00 2.59
50 51 2.240279 ACTGTTTAGAGCGGAGTGAGT 58.760 47.619 0.00 0.00 0.00 3.41
51 52 3.246619 GAACTGTTTAGAGCGGAGTGAG 58.753 50.000 0.00 0.00 0.00 3.51
52 53 2.626266 TGAACTGTTTAGAGCGGAGTGA 59.374 45.455 0.00 0.00 0.00 3.41
53 54 3.026630 TGAACTGTTTAGAGCGGAGTG 57.973 47.619 0.00 0.00 0.00 3.51
54 55 3.746045 TTGAACTGTTTAGAGCGGAGT 57.254 42.857 0.00 0.00 0.00 3.85
55 56 4.511826 AGTTTTGAACTGTTTAGAGCGGAG 59.488 41.667 0.00 0.00 41.01 4.63
56 57 4.448210 AGTTTTGAACTGTTTAGAGCGGA 58.552 39.130 0.00 0.00 41.01 5.54
57 58 4.813296 AGTTTTGAACTGTTTAGAGCGG 57.187 40.909 0.00 0.00 41.01 5.52
58 59 5.177696 AGCTAGTTTTGAACTGTTTAGAGCG 59.822 40.000 3.70 0.00 42.84 5.03
59 60 6.017852 ACAGCTAGTTTTGAACTGTTTAGAGC 60.018 38.462 3.70 3.80 42.84 4.09
60 61 7.439655 AGACAGCTAGTTTTGAACTGTTTAGAG 59.560 37.037 3.70 0.00 41.45 2.43
61 62 7.272978 AGACAGCTAGTTTTGAACTGTTTAGA 58.727 34.615 3.70 0.00 41.45 2.10
62 63 7.484035 AGACAGCTAGTTTTGAACTGTTTAG 57.516 36.000 3.70 0.00 41.45 1.85
63 64 7.859325 AAGACAGCTAGTTTTGAACTGTTTA 57.141 32.000 3.70 0.00 41.45 2.01
64 65 6.759497 AAGACAGCTAGTTTTGAACTGTTT 57.241 33.333 3.70 0.00 41.45 2.83
65 66 7.859325 TTAAGACAGCTAGTTTTGAACTGTT 57.141 32.000 3.70 0.00 41.45 3.16
66 67 7.859325 TTTAAGACAGCTAGTTTTGAACTGT 57.141 32.000 3.70 0.00 43.93 3.55
67 68 8.345565 ACATTTAAGACAGCTAGTTTTGAACTG 58.654 33.333 3.70 0.00 42.84 3.16
68 69 8.451908 ACATTTAAGACAGCTAGTTTTGAACT 57.548 30.769 0.00 0.00 45.40 3.01
69 70 8.560374 AGACATTTAAGACAGCTAGTTTTGAAC 58.440 33.333 0.00 0.00 0.00 3.18
70 71 8.677148 AGACATTTAAGACAGCTAGTTTTGAA 57.323 30.769 0.00 0.00 0.00 2.69
71 72 8.677148 AAGACATTTAAGACAGCTAGTTTTGA 57.323 30.769 0.00 0.00 0.00 2.69
88 89 8.512138 CCCTCTGTTCGTTTTTATAAGACATTT 58.488 33.333 3.08 0.00 0.00 2.32
89 90 7.881232 TCCCTCTGTTCGTTTTTATAAGACATT 59.119 33.333 3.08 0.00 0.00 2.71
90 91 7.391620 TCCCTCTGTTCGTTTTTATAAGACAT 58.608 34.615 3.08 0.00 0.00 3.06
91 92 6.761312 TCCCTCTGTTCGTTTTTATAAGACA 58.239 36.000 3.08 0.00 0.00 3.41
92 93 6.872547 ACTCCCTCTGTTCGTTTTTATAAGAC 59.127 38.462 0.00 0.00 0.00 3.01
93 94 7.001099 ACTCCCTCTGTTCGTTTTTATAAGA 57.999 36.000 0.00 0.00 0.00 2.10
94 95 8.943909 ATACTCCCTCTGTTCGTTTTTATAAG 57.056 34.615 0.00 0.00 0.00 1.73
95 96 9.729281 AAATACTCCCTCTGTTCGTTTTTATAA 57.271 29.630 0.00 0.00 0.00 0.98
96 97 9.374838 GAAATACTCCCTCTGTTCGTTTTTATA 57.625 33.333 0.00 0.00 0.00 0.98
97 98 7.881232 TGAAATACTCCCTCTGTTCGTTTTTAT 59.119 33.333 0.00 0.00 0.00 1.40
98 99 7.218614 TGAAATACTCCCTCTGTTCGTTTTTA 58.781 34.615 0.00 0.00 0.00 1.52
99 100 6.059484 TGAAATACTCCCTCTGTTCGTTTTT 58.941 36.000 0.00 0.00 0.00 1.94
100 101 5.617252 TGAAATACTCCCTCTGTTCGTTTT 58.383 37.500 0.00 0.00 0.00 2.43
101 102 5.221661 ACTGAAATACTCCCTCTGTTCGTTT 60.222 40.000 0.00 0.00 0.00 3.60
102 103 4.283722 ACTGAAATACTCCCTCTGTTCGTT 59.716 41.667 0.00 0.00 0.00 3.85
103 104 3.833070 ACTGAAATACTCCCTCTGTTCGT 59.167 43.478 0.00 0.00 0.00 3.85
104 105 4.457834 ACTGAAATACTCCCTCTGTTCG 57.542 45.455 0.00 0.00 0.00 3.95
105 106 5.794894 TCAACTGAAATACTCCCTCTGTTC 58.205 41.667 0.00 0.00 31.34 3.18
106 107 5.825593 TCAACTGAAATACTCCCTCTGTT 57.174 39.130 0.00 0.00 33.21 3.16
107 108 5.485353 TCATCAACTGAAATACTCCCTCTGT 59.515 40.000 0.00 0.00 0.00 3.41
108 109 5.814705 GTCATCAACTGAAATACTCCCTCTG 59.185 44.000 0.00 0.00 35.07 3.35
109 110 5.723887 AGTCATCAACTGAAATACTCCCTCT 59.276 40.000 0.00 0.00 36.65 3.69
110 111 5.983540 AGTCATCAACTGAAATACTCCCTC 58.016 41.667 0.00 0.00 36.65 4.30
111 112 7.682787 ATAGTCATCAACTGAAATACTCCCT 57.317 36.000 0.00 0.00 39.11 4.20
150 151 6.017770 GCTCATCCTTCATCATCTTGAGAAAG 60.018 42.308 0.00 0.00 32.77 2.62
153 154 4.501058 CGCTCATCCTTCATCATCTTGAGA 60.501 45.833 0.00 0.00 32.77 3.27
163 164 2.171237 TGATTGTCCGCTCATCCTTCAT 59.829 45.455 0.00 0.00 0.00 2.57
180 181 1.068333 GTGCAACCGCTTGTGATGATT 60.068 47.619 0.00 0.00 39.64 2.57
200 201 3.006940 TCCAAGGCGCACATAACTTTAG 58.993 45.455 10.83 0.00 0.00 1.85
219 220 5.506815 CCATATTGTGTGCATCTTCATGTCC 60.507 44.000 0.00 0.00 31.86 4.02
221 222 4.951715 ACCATATTGTGTGCATCTTCATGT 59.048 37.500 0.00 0.00 31.86 3.21
222 223 5.066764 TGACCATATTGTGTGCATCTTCATG 59.933 40.000 0.00 0.00 0.00 3.07
229 230 5.419788 AGTTGAATGACCATATTGTGTGCAT 59.580 36.000 0.00 0.00 0.00 3.96
230 231 4.766373 AGTTGAATGACCATATTGTGTGCA 59.234 37.500 0.00 0.00 0.00 4.57
260 261 6.976636 AAAACATTTTGTTGTTGGTGTAGG 57.023 33.333 0.00 0.00 40.14 3.18
264 265 4.785561 GCGAAAAACATTTTGTTGTTGGTG 59.214 37.500 0.67 0.00 37.88 4.17
275 944 5.183904 AGCATAGAAGAGGCGAAAAACATTT 59.816 36.000 0.00 0.00 40.72 2.32
278 947 3.674997 AGCATAGAAGAGGCGAAAAACA 58.325 40.909 0.00 0.00 40.72 2.83
287 956 6.909550 AGAACCATAGTAGCATAGAAGAGG 57.090 41.667 0.00 0.00 0.00 3.69
293 962 9.817809 TCTAAAACAAGAACCATAGTAGCATAG 57.182 33.333 0.00 0.00 0.00 2.23
315 984 9.996554 TCAAGTTCAGATCAACTAACATTCTAA 57.003 29.630 0.00 0.00 35.45 2.10
316 985 9.996554 TTCAAGTTCAGATCAACTAACATTCTA 57.003 29.630 0.00 0.00 35.45 2.10
317 986 8.778358 GTTCAAGTTCAGATCAACTAACATTCT 58.222 33.333 0.00 0.00 35.45 2.40
318 987 8.778358 AGTTCAAGTTCAGATCAACTAACATTC 58.222 33.333 11.33 0.00 35.45 2.67
319 988 8.682936 AGTTCAAGTTCAGATCAACTAACATT 57.317 30.769 11.33 0.00 35.45 2.71
320 989 8.682936 AAGTTCAAGTTCAGATCAACTAACAT 57.317 30.769 11.33 1.53 35.45 2.71
321 990 8.506168 AAAGTTCAAGTTCAGATCAACTAACA 57.494 30.769 11.33 0.00 35.45 2.41
325 994 8.624776 CCTTAAAAGTTCAAGTTCAGATCAACT 58.375 33.333 0.00 0.00 38.30 3.16
326 995 8.406297 ACCTTAAAAGTTCAAGTTCAGATCAAC 58.594 33.333 0.00 0.00 0.00 3.18
327 996 8.519799 ACCTTAAAAGTTCAAGTTCAGATCAA 57.480 30.769 0.00 0.00 0.00 2.57
328 997 7.993183 AGACCTTAAAAGTTCAAGTTCAGATCA 59.007 33.333 0.00 0.00 0.00 2.92
329 998 8.286097 CAGACCTTAAAAGTTCAAGTTCAGATC 58.714 37.037 0.00 0.00 0.00 2.75
330 999 7.775561 ACAGACCTTAAAAGTTCAAGTTCAGAT 59.224 33.333 0.00 0.00 0.00 2.90
331 1000 7.110155 ACAGACCTTAAAAGTTCAAGTTCAGA 58.890 34.615 0.00 0.00 0.00 3.27
332 1001 7.321745 ACAGACCTTAAAAGTTCAAGTTCAG 57.678 36.000 0.00 0.00 0.00 3.02
333 1002 7.825270 TGTACAGACCTTAAAAGTTCAAGTTCA 59.175 33.333 0.00 0.00 0.00 3.18
334 1003 8.121086 GTGTACAGACCTTAAAAGTTCAAGTTC 58.879 37.037 0.00 0.00 0.00 3.01
335 1004 7.066645 GGTGTACAGACCTTAAAAGTTCAAGTT 59.933 37.037 0.00 0.00 32.69 2.66
336 1005 6.541278 GGTGTACAGACCTTAAAAGTTCAAGT 59.459 38.462 0.00 0.00 32.69 3.16
337 1006 6.017357 GGGTGTACAGACCTTAAAAGTTCAAG 60.017 42.308 8.87 0.00 36.14 3.02
338 1007 5.824097 GGGTGTACAGACCTTAAAAGTTCAA 59.176 40.000 8.87 0.00 36.14 2.69
339 1008 5.370679 GGGTGTACAGACCTTAAAAGTTCA 58.629 41.667 8.87 0.00 36.14 3.18
340 1009 4.758674 GGGGTGTACAGACCTTAAAAGTTC 59.241 45.833 14.36 0.00 36.14 3.01
341 1010 4.414514 AGGGGTGTACAGACCTTAAAAGTT 59.585 41.667 11.56 0.00 36.14 2.66
342 1011 3.978672 AGGGGTGTACAGACCTTAAAAGT 59.021 43.478 11.56 0.00 36.14 2.66
343 1012 4.576879 GAGGGGTGTACAGACCTTAAAAG 58.423 47.826 16.98 0.00 36.14 2.27
344 1013 3.007182 CGAGGGGTGTACAGACCTTAAAA 59.993 47.826 16.98 0.00 36.14 1.52
345 1014 2.564062 CGAGGGGTGTACAGACCTTAAA 59.436 50.000 16.98 0.00 36.14 1.52
346 1015 2.173519 CGAGGGGTGTACAGACCTTAA 58.826 52.381 16.98 0.00 36.14 1.85
347 1016 1.076024 ACGAGGGGTGTACAGACCTTA 59.924 52.381 16.98 0.00 36.14 2.69
348 1017 0.178941 ACGAGGGGTGTACAGACCTT 60.179 55.000 16.98 9.76 36.14 3.50
349 1018 0.700564 TACGAGGGGTGTACAGACCT 59.299 55.000 16.13 16.13 36.14 3.85
350 1019 1.475682 CTTACGAGGGGTGTACAGACC 59.524 57.143 0.00 1.28 34.96 3.85
351 1020 1.475682 CCTTACGAGGGGTGTACAGAC 59.524 57.143 0.00 0.00 39.55 3.51
352 1021 1.843368 CCTTACGAGGGGTGTACAGA 58.157 55.000 0.00 0.00 39.55 3.41
362 1031 5.476254 CCTAGATAACTAACCCCTTACGAGG 59.524 48.000 0.00 0.00 43.15 4.63
363 1032 5.476254 CCCTAGATAACTAACCCCTTACGAG 59.524 48.000 0.00 0.00 0.00 4.18
364 1033 5.134339 TCCCTAGATAACTAACCCCTTACGA 59.866 44.000 0.00 0.00 0.00 3.43
365 1034 5.388654 TCCCTAGATAACTAACCCCTTACG 58.611 45.833 0.00 0.00 0.00 3.18
366 1035 5.245751 GCTCCCTAGATAACTAACCCCTTAC 59.754 48.000 0.00 0.00 0.00 2.34
367 1036 5.137429 AGCTCCCTAGATAACTAACCCCTTA 59.863 44.000 0.00 0.00 0.00 2.69
368 1037 4.077923 AGCTCCCTAGATAACTAACCCCTT 60.078 45.833 0.00 0.00 0.00 3.95
369 1038 3.471690 AGCTCCCTAGATAACTAACCCCT 59.528 47.826 0.00 0.00 0.00 4.79
370 1039 3.579151 CAGCTCCCTAGATAACTAACCCC 59.421 52.174 0.00 0.00 0.00 4.95
371 1040 4.481072 TCAGCTCCCTAGATAACTAACCC 58.519 47.826 0.00 0.00 0.00 4.11
372 1041 5.599242 AGTTCAGCTCCCTAGATAACTAACC 59.401 44.000 0.00 0.00 0.00 2.85
373 1042 6.718522 AGTTCAGCTCCCTAGATAACTAAC 57.281 41.667 0.00 0.00 0.00 2.34
374 1043 6.407074 GCAAGTTCAGCTCCCTAGATAACTAA 60.407 42.308 0.00 0.00 0.00 2.24
375 1044 5.069251 GCAAGTTCAGCTCCCTAGATAACTA 59.931 44.000 0.00 0.00 0.00 2.24
376 1045 4.141824 GCAAGTTCAGCTCCCTAGATAACT 60.142 45.833 0.00 0.00 0.00 2.24
377 1046 4.123506 GCAAGTTCAGCTCCCTAGATAAC 58.876 47.826 0.00 0.00 0.00 1.89
378 1047 4.033709 AGCAAGTTCAGCTCCCTAGATAA 58.966 43.478 0.00 0.00 38.01 1.75
379 1048 3.647636 AGCAAGTTCAGCTCCCTAGATA 58.352 45.455 0.00 0.00 38.01 1.98
380 1049 2.476199 AGCAAGTTCAGCTCCCTAGAT 58.524 47.619 0.00 0.00 38.01 1.98
381 1050 1.944177 AGCAAGTTCAGCTCCCTAGA 58.056 50.000 0.00 0.00 38.01 2.43
382 1051 2.159028 GGTAGCAAGTTCAGCTCCCTAG 60.159 54.545 0.00 0.00 42.32 3.02
383 1052 1.831736 GGTAGCAAGTTCAGCTCCCTA 59.168 52.381 0.00 0.00 42.32 3.53
384 1053 0.615850 GGTAGCAAGTTCAGCTCCCT 59.384 55.000 0.00 0.00 42.32 4.20
385 1054 0.615850 AGGTAGCAAGTTCAGCTCCC 59.384 55.000 0.00 0.00 42.32 4.30
386 1055 3.611766 TTAGGTAGCAAGTTCAGCTCC 57.388 47.619 0.00 0.00 42.32 4.70
387 1056 4.570930 AGTTTAGGTAGCAAGTTCAGCTC 58.429 43.478 0.00 0.00 42.32 4.09
388 1057 4.625607 AGTTTAGGTAGCAAGTTCAGCT 57.374 40.909 0.00 0.00 45.77 4.24
389 1058 4.515567 ACAAGTTTAGGTAGCAAGTTCAGC 59.484 41.667 0.00 0.00 0.00 4.26
390 1059 6.483640 AGAACAAGTTTAGGTAGCAAGTTCAG 59.516 38.462 0.00 0.00 36.29 3.02
391 1060 6.354130 AGAACAAGTTTAGGTAGCAAGTTCA 58.646 36.000 0.00 0.00 36.29 3.18
392 1061 6.346678 CGAGAACAAGTTTAGGTAGCAAGTTC 60.347 42.308 0.00 0.00 34.61 3.01
393 1062 5.465724 CGAGAACAAGTTTAGGTAGCAAGTT 59.534 40.000 0.00 0.00 0.00 2.66
394 1063 4.989168 CGAGAACAAGTTTAGGTAGCAAGT 59.011 41.667 0.00 0.00 0.00 3.16
395 1064 4.989168 ACGAGAACAAGTTTAGGTAGCAAG 59.011 41.667 0.00 0.00 0.00 4.01
396 1065 4.748102 CACGAGAACAAGTTTAGGTAGCAA 59.252 41.667 0.00 0.00 0.00 3.91
397 1066 4.202182 ACACGAGAACAAGTTTAGGTAGCA 60.202 41.667 0.00 0.00 0.00 3.49
398 1067 4.150098 CACACGAGAACAAGTTTAGGTAGC 59.850 45.833 0.00 0.00 0.00 3.58
399 1068 5.287226 ACACACGAGAACAAGTTTAGGTAG 58.713 41.667 0.00 0.00 0.00 3.18
400 1069 5.266733 ACACACGAGAACAAGTTTAGGTA 57.733 39.130 0.00 0.00 0.00 3.08
401 1070 4.133013 ACACACGAGAACAAGTTTAGGT 57.867 40.909 0.00 0.00 0.00 3.08
402 1071 4.260620 CCAACACACGAGAACAAGTTTAGG 60.261 45.833 0.00 0.00 0.00 2.69
403 1072 4.331717 ACCAACACACGAGAACAAGTTTAG 59.668 41.667 0.00 0.00 0.00 1.85
404 1073 4.255301 ACCAACACACGAGAACAAGTTTA 58.745 39.130 0.00 0.00 0.00 2.01
405 1074 3.078837 ACCAACACACGAGAACAAGTTT 58.921 40.909 0.00 0.00 0.00 2.66
406 1075 2.706890 ACCAACACACGAGAACAAGTT 58.293 42.857 0.00 0.00 0.00 2.66
407 1076 2.396590 ACCAACACACGAGAACAAGT 57.603 45.000 0.00 0.00 0.00 3.16
408 1077 3.680789 GAAACCAACACACGAGAACAAG 58.319 45.455 0.00 0.00 0.00 3.16
409 1078 2.094575 CGAAACCAACACACGAGAACAA 59.905 45.455 0.00 0.00 0.00 2.83
410 1079 1.661617 CGAAACCAACACACGAGAACA 59.338 47.619 0.00 0.00 0.00 3.18
411 1080 1.662122 ACGAAACCAACACACGAGAAC 59.338 47.619 0.00 0.00 0.00 3.01
412 1081 2.012937 ACGAAACCAACACACGAGAA 57.987 45.000 0.00 0.00 0.00 2.87
413 1082 2.012937 AACGAAACCAACACACGAGA 57.987 45.000 0.00 0.00 0.00 4.04
414 1083 3.929417 TTAACGAAACCAACACACGAG 57.071 42.857 0.00 0.00 0.00 4.18
415 1084 3.869832 TCATTAACGAAACCAACACACGA 59.130 39.130 0.00 0.00 0.00 4.35
416 1085 4.198473 TCATTAACGAAACCAACACACG 57.802 40.909 0.00 0.00 0.00 4.49
417 1086 5.575019 ACTTCATTAACGAAACCAACACAC 58.425 37.500 0.00 0.00 0.00 3.82
418 1087 5.821516 ACTTCATTAACGAAACCAACACA 57.178 34.783 0.00 0.00 0.00 3.72
419 1088 5.457473 CCAACTTCATTAACGAAACCAACAC 59.543 40.000 0.00 0.00 0.00 3.32
420 1089 5.357314 TCCAACTTCATTAACGAAACCAACA 59.643 36.000 0.00 0.00 0.00 3.33
421 1090 5.823353 TCCAACTTCATTAACGAAACCAAC 58.177 37.500 0.00 0.00 0.00 3.77
422 1091 5.009210 CCTCCAACTTCATTAACGAAACCAA 59.991 40.000 0.00 0.00 0.00 3.67
423 1092 4.517453 CCTCCAACTTCATTAACGAAACCA 59.483 41.667 0.00 0.00 0.00 3.67
424 1093 4.082949 CCCTCCAACTTCATTAACGAAACC 60.083 45.833 0.00 0.00 0.00 3.27
425 1094 4.082949 CCCCTCCAACTTCATTAACGAAAC 60.083 45.833 0.00 0.00 0.00 2.78
426 1095 4.076394 CCCCTCCAACTTCATTAACGAAA 58.924 43.478 0.00 0.00 0.00 3.46
427 1096 3.328343 TCCCCTCCAACTTCATTAACGAA 59.672 43.478 0.00 0.00 0.00 3.85
428 1097 2.907696 TCCCCTCCAACTTCATTAACGA 59.092 45.455 0.00 0.00 0.00 3.85
429 1098 3.270877 CTCCCCTCCAACTTCATTAACG 58.729 50.000 0.00 0.00 0.00 3.18
430 1099 4.302559 ACTCCCCTCCAACTTCATTAAC 57.697 45.455 0.00 0.00 0.00 2.01
431 1100 4.263771 GGAACTCCCCTCCAACTTCATTAA 60.264 45.833 0.00 0.00 32.77 1.40
432 1101 3.265995 GGAACTCCCCTCCAACTTCATTA 59.734 47.826 0.00 0.00 32.77 1.90
433 1102 2.041755 GGAACTCCCCTCCAACTTCATT 59.958 50.000 0.00 0.00 32.77 2.57
434 1103 1.636003 GGAACTCCCCTCCAACTTCAT 59.364 52.381 0.00 0.00 32.77 2.57
435 1104 1.064825 GGAACTCCCCTCCAACTTCA 58.935 55.000 0.00 0.00 32.77 3.02
436 1105 3.959433 GGAACTCCCCTCCAACTTC 57.041 57.895 0.00 0.00 32.77 3.01
471 1140 8.240682 GCACCAAATTAAAACAAGAACCTTTTT 58.759 29.630 0.00 0.00 0.00 1.94
472 1141 7.609918 AGCACCAAATTAAAACAAGAACCTTTT 59.390 29.630 0.00 0.00 0.00 2.27
473 1142 7.109501 AGCACCAAATTAAAACAAGAACCTTT 58.890 30.769 0.00 0.00 0.00 3.11
474 1143 6.649155 AGCACCAAATTAAAACAAGAACCTT 58.351 32.000 0.00 0.00 0.00 3.50
475 1144 6.233905 AGCACCAAATTAAAACAAGAACCT 57.766 33.333 0.00 0.00 0.00 3.50
510 1179 6.031549 TCAAATCACAATAGCATACGTTCG 57.968 37.500 0.00 0.00 0.00 3.95
538 1207 3.057596 ACATAGGTTCAAACACCATTGCG 60.058 43.478 0.00 0.00 39.62 4.85
548 1217 9.194972 TGCATATCCAATTTACATAGGTTCAAA 57.805 29.630 0.00 0.00 0.00 2.69
686 1360 4.265792 ACGTTTTGTTTTTGAATACCGTGC 59.734 37.500 0.00 0.00 0.00 5.34
711 1385 0.036105 ATGTGAGCTGGTTCATCGCA 60.036 50.000 0.00 0.00 37.81 5.10
747 1421 1.503818 CGGTGAACTTCCCACGGTTG 61.504 60.000 0.00 0.00 35.48 3.77
748 1422 1.227734 CGGTGAACTTCCCACGGTT 60.228 57.895 0.00 0.00 35.48 4.44
754 1428 2.561569 CATGGTATCGGTGAACTTCCC 58.438 52.381 0.00 0.00 0.00 3.97
822 1510 2.158726 GCCCGACATAATTAACCCCTGA 60.159 50.000 0.00 0.00 0.00 3.86
836 1524 1.682684 GGAGGAAGAGAGCCCGACA 60.683 63.158 0.00 0.00 0.00 4.35
861 1555 3.121030 GTAGGCACCACAGCTGCG 61.121 66.667 15.27 3.57 35.31 5.18
866 1560 1.967319 ACAAGTTGTAGGCACCACAG 58.033 50.000 6.75 0.00 0.00 3.66
896 1590 4.464951 TCGGTCTTACTTCTTGCCAAGATA 59.535 41.667 8.18 0.00 37.38 1.98
897 1591 3.260884 TCGGTCTTACTTCTTGCCAAGAT 59.739 43.478 8.18 0.00 37.38 2.40
898 1592 2.631062 TCGGTCTTACTTCTTGCCAAGA 59.369 45.455 2.24 2.24 35.26 3.02
899 1593 3.040147 TCGGTCTTACTTCTTGCCAAG 57.960 47.619 0.00 0.00 0.00 3.61
900 1594 3.596214 GATCGGTCTTACTTCTTGCCAA 58.404 45.455 0.00 0.00 0.00 4.52
901 1595 2.416836 CGATCGGTCTTACTTCTTGCCA 60.417 50.000 7.38 0.00 0.00 4.92
902 1596 2.194271 CGATCGGTCTTACTTCTTGCC 58.806 52.381 7.38 0.00 0.00 4.52
903 1597 1.588861 GCGATCGGTCTTACTTCTTGC 59.411 52.381 18.30 0.00 0.00 4.01
908 1602 3.587797 TTGAAGCGATCGGTCTTACTT 57.412 42.857 21.51 11.58 0.00 2.24
914 1608 3.537793 AACTTTTTGAAGCGATCGGTC 57.462 42.857 21.51 14.09 0.00 4.79
916 1610 4.147219 AGAAACTTTTTGAAGCGATCGG 57.853 40.909 18.30 0.00 0.00 4.18
925 1619 3.713288 TCTCGAGCGAGAAACTTTTTGA 58.287 40.909 19.11 0.00 46.89 2.69
957 1651 1.066605 ACCCGACGGAATGTAATCGAG 59.933 52.381 17.49 0.00 36.70 4.04
967 1661 2.992689 TAGCTGCACCCGACGGAA 60.993 61.111 17.49 0.00 0.00 4.30
974 1668 2.825264 CCTAGCCTAGCTGCACCC 59.175 66.667 1.02 0.00 40.10 4.61
975 1669 2.110006 GCCTAGCCTAGCTGCACC 59.890 66.667 1.02 0.00 40.10 5.01
1150 1863 1.446272 GACGAAGGTGGCCGAAGAG 60.446 63.158 0.00 0.00 0.00 2.85
1453 2166 0.109086 CTGACGCGTCTGAAGGACAT 60.109 55.000 36.27 0.00 44.70 3.06
1594 2319 2.803479 GCCGTCGATCCCGTAGTT 59.197 61.111 0.00 0.00 37.05 2.24
1749 2492 2.432146 CAGTCCATCCATCTCCTCGAAA 59.568 50.000 0.00 0.00 0.00 3.46
1824 2582 1.007734 GTCCACGAAGTCACGCTGA 60.008 57.895 0.00 0.00 41.61 4.26
1854 2616 2.355837 GTGTCGAGCTCGTTGGCA 60.356 61.111 33.33 23.64 40.80 4.92
2331 3120 2.933287 ATGGCGAACCTGACCCCA 60.933 61.111 0.00 0.00 36.63 4.96
2544 3336 6.596888 TGAGCTAGCTCGTACTTACTTAGAAA 59.403 38.462 33.55 12.31 45.48 2.52
2546 3338 5.668471 TGAGCTAGCTCGTACTTACTTAGA 58.332 41.667 33.55 13.33 45.48 2.10
2547 3339 5.754406 TCTGAGCTAGCTCGTACTTACTTAG 59.246 44.000 33.55 22.59 45.48 2.18
2548 3340 5.668471 TCTGAGCTAGCTCGTACTTACTTA 58.332 41.667 33.55 15.30 45.48 2.24
2549 3341 4.515361 TCTGAGCTAGCTCGTACTTACTT 58.485 43.478 33.55 2.19 45.48 2.24
2550 3342 4.124238 CTCTGAGCTAGCTCGTACTTACT 58.876 47.826 33.55 2.75 45.48 2.24
2551 3343 3.303526 GCTCTGAGCTAGCTCGTACTTAC 60.304 52.174 33.55 18.22 45.48 2.34
2552 3344 2.873472 GCTCTGAGCTAGCTCGTACTTA 59.127 50.000 33.55 17.94 45.48 2.24
2553 3345 1.673920 GCTCTGAGCTAGCTCGTACTT 59.326 52.381 33.55 5.11 45.48 2.24
2607 3399 7.684317 TGACATTGGGAATCTTGGTACTATA 57.316 36.000 0.00 0.00 0.00 1.31
2608 3400 6.575244 TGACATTGGGAATCTTGGTACTAT 57.425 37.500 0.00 0.00 0.00 2.12
2630 3422 3.541071 TTGTCAACACGCATCTCAATG 57.459 42.857 0.00 0.00 35.87 2.82
2666 3460 9.139174 GGAAATTAACAAGTGAACAATACATGG 57.861 33.333 0.00 0.00 0.00 3.66
2765 3559 1.320555 GTGCTATGAACGCGTACACAG 59.679 52.381 14.46 9.38 0.00 3.66
2778 3572 6.331845 TCAATTTGCAATTAGTGGTGCTATG 58.668 36.000 0.00 0.00 41.48 2.23
2819 3613 7.554118 TCATGTCTGTCTTCTTTTTCTGTTCTT 59.446 33.333 0.00 0.00 0.00 2.52
2820 3614 7.050377 TCATGTCTGTCTTCTTTTTCTGTTCT 58.950 34.615 0.00 0.00 0.00 3.01
2821 3615 7.251704 TCATGTCTGTCTTCTTTTTCTGTTC 57.748 36.000 0.00 0.00 0.00 3.18
2822 3616 7.814264 ATCATGTCTGTCTTCTTTTTCTGTT 57.186 32.000 0.00 0.00 0.00 3.16
2823 3617 8.944029 CATATCATGTCTGTCTTCTTTTTCTGT 58.056 33.333 0.00 0.00 0.00 3.41
2824 3618 9.159364 TCATATCATGTCTGTCTTCTTTTTCTG 57.841 33.333 0.00 0.00 0.00 3.02
2825 3619 9.730705 TTCATATCATGTCTGTCTTCTTTTTCT 57.269 29.630 0.00 0.00 0.00 2.52
2826 3620 9.985318 CTTCATATCATGTCTGTCTTCTTTTTC 57.015 33.333 0.00 0.00 0.00 2.29
2827 3621 8.457261 GCTTCATATCATGTCTGTCTTCTTTTT 58.543 33.333 0.00 0.00 0.00 1.94
2832 3626 9.352784 GTATAGCTTCATATCATGTCTGTCTTC 57.647 37.037 0.00 0.00 0.00 2.87
2836 3630 6.209589 ACCGTATAGCTTCATATCATGTCTGT 59.790 38.462 0.00 0.00 0.00 3.41
2886 3680 1.602377 GTGCGGTATATGCTCAAACCC 59.398 52.381 2.21 0.00 0.00 4.11
2887 3681 1.260561 CGTGCGGTATATGCTCAAACC 59.739 52.381 2.21 0.00 0.00 3.27
2888 3682 1.931172 ACGTGCGGTATATGCTCAAAC 59.069 47.619 0.00 0.00 0.00 2.93
2889 3683 2.303163 ACGTGCGGTATATGCTCAAA 57.697 45.000 0.00 0.00 0.00 2.69
2890 3684 2.099427 TGTACGTGCGGTATATGCTCAA 59.901 45.455 0.00 0.00 32.74 3.02
2891 3685 1.677052 TGTACGTGCGGTATATGCTCA 59.323 47.619 0.00 0.00 32.74 4.26
2892 3686 2.410785 TGTACGTGCGGTATATGCTC 57.589 50.000 0.00 0.00 32.74 4.26
2893 3687 2.875087 TTGTACGTGCGGTATATGCT 57.125 45.000 0.00 0.00 32.74 3.79
2894 3688 2.798283 ACATTGTACGTGCGGTATATGC 59.202 45.455 0.00 0.00 33.09 3.14
2895 3689 6.699895 ATTACATTGTACGTGCGGTATATG 57.300 37.500 0.00 0.00 34.63 1.78
2896 3690 7.718272 AAATTACATTGTACGTGCGGTATAT 57.282 32.000 0.00 0.00 32.74 0.86
2897 3691 7.277319 TGAAAATTACATTGTACGTGCGGTATA 59.723 33.333 0.00 0.00 32.74 1.47
2898 3692 6.092396 TGAAAATTACATTGTACGTGCGGTAT 59.908 34.615 0.00 0.00 32.74 2.73
2899 3693 5.407691 TGAAAATTACATTGTACGTGCGGTA 59.592 36.000 0.00 0.00 0.00 4.02
2900 3694 4.213694 TGAAAATTACATTGTACGTGCGGT 59.786 37.500 0.00 0.00 0.00 5.68
2901 3695 4.551892 GTGAAAATTACATTGTACGTGCGG 59.448 41.667 0.00 0.00 0.00 5.69
2902 3696 5.280446 CAGTGAAAATTACATTGTACGTGCG 59.720 40.000 0.00 0.00 0.00 5.34
2903 3697 5.567534 CCAGTGAAAATTACATTGTACGTGC 59.432 40.000 0.00 0.00 0.00 5.34
2904 3698 5.567534 GCCAGTGAAAATTACATTGTACGTG 59.432 40.000 0.00 0.00 0.00 4.49
2905 3699 5.239744 TGCCAGTGAAAATTACATTGTACGT 59.760 36.000 0.00 0.00 0.00 3.57
2906 3700 5.694816 TGCCAGTGAAAATTACATTGTACG 58.305 37.500 0.00 0.00 0.00 3.67
2907 3701 6.677913 ACTGCCAGTGAAAATTACATTGTAC 58.322 36.000 0.00 0.00 0.00 2.90
2908 3702 6.892658 ACTGCCAGTGAAAATTACATTGTA 57.107 33.333 0.00 0.00 0.00 2.41
2909 3703 5.789643 ACTGCCAGTGAAAATTACATTGT 57.210 34.783 0.00 0.00 0.00 2.71
2923 3717 4.626081 GCCCGACACACTGCCAGT 62.626 66.667 0.00 0.00 0.00 4.00
2924 3718 4.624364 TGCCCGACACACTGCCAG 62.624 66.667 0.00 0.00 0.00 4.85
2925 3719 3.490031 ATTGCCCGACACACTGCCA 62.490 57.895 0.00 0.00 0.00 4.92
2926 3720 2.672996 ATTGCCCGACACACTGCC 60.673 61.111 0.00 0.00 0.00 4.85
2927 3721 1.237285 AAGATTGCCCGACACACTGC 61.237 55.000 0.00 0.00 0.00 4.40
2928 3722 2.093306 TAAGATTGCCCGACACACTG 57.907 50.000 0.00 0.00 0.00 3.66
2936 3730 3.059597 CGTAGATGCTTTAAGATTGCCCG 60.060 47.826 0.00 0.00 0.00 6.13
2942 3736 2.548067 CGGGCCGTAGATGCTTTAAGAT 60.548 50.000 19.97 0.00 0.00 2.40
2943 3737 1.202486 CGGGCCGTAGATGCTTTAAGA 60.202 52.381 19.97 0.00 0.00 2.10
2944 3738 1.217882 CGGGCCGTAGATGCTTTAAG 58.782 55.000 19.97 0.00 0.00 1.85
2945 3739 0.179067 CCGGGCCGTAGATGCTTTAA 60.179 55.000 26.32 0.00 0.00 1.52
2946 3740 1.332144 ACCGGGCCGTAGATGCTTTA 61.332 55.000 26.32 0.00 0.00 1.85
2947 3741 2.189521 CCGGGCCGTAGATGCTTT 59.810 61.111 26.32 0.00 0.00 3.51
2948 3742 3.081409 ACCGGGCCGTAGATGCTT 61.081 61.111 26.32 0.00 0.00 3.91
2949 3743 3.849951 CACCGGGCCGTAGATGCT 61.850 66.667 26.32 0.00 0.00 3.79
2959 3753 2.111251 GGATCTAAGGCACCGGGC 59.889 66.667 6.32 6.36 43.74 6.13
2960 3754 2.421739 CGGATCTAAGGCACCGGG 59.578 66.667 6.32 0.00 41.41 5.73
2961 3755 2.280186 GCGGATCTAAGGCACCGG 60.280 66.667 0.00 0.00 44.61 5.28
2962 3756 2.280186 GGCGGATCTAAGGCACCG 60.280 66.667 0.00 0.00 46.74 4.94
2963 3757 1.069935 GAGGCGGATCTAAGGCACC 59.930 63.158 11.07 0.00 35.18 5.01
2964 3758 0.394565 ATGAGGCGGATCTAAGGCAC 59.605 55.000 11.07 6.58 35.18 5.01
2965 3759 2.009681 TATGAGGCGGATCTAAGGCA 57.990 50.000 11.07 0.00 35.18 4.75
2966 3760 2.898705 CATATGAGGCGGATCTAAGGC 58.101 52.381 0.00 0.00 0.00 4.35
2967 3761 2.499289 AGCATATGAGGCGGATCTAAGG 59.501 50.000 6.97 0.00 36.08 2.69
2968 3762 3.430098 GGAGCATATGAGGCGGATCTAAG 60.430 52.174 6.97 0.00 36.08 2.18
2969 3763 2.497675 GGAGCATATGAGGCGGATCTAA 59.502 50.000 6.97 0.00 36.08 2.10
2970 3764 2.103373 GGAGCATATGAGGCGGATCTA 58.897 52.381 6.97 0.00 36.08 1.98
2971 3765 0.901124 GGAGCATATGAGGCGGATCT 59.099 55.000 6.97 0.00 36.08 2.75
2972 3766 0.459237 CGGAGCATATGAGGCGGATC 60.459 60.000 6.97 0.00 36.08 3.36
2973 3767 1.593787 CGGAGCATATGAGGCGGAT 59.406 57.895 6.97 0.00 36.08 4.18
2974 3768 2.574018 CCGGAGCATATGAGGCGGA 61.574 63.158 6.97 0.00 36.08 5.54
2985 3779 2.741092 GGATATTCCGCCGGAGCA 59.259 61.111 5.05 0.00 39.83 4.26
2996 3790 8.813951 TGGGTTAAAATTTTACAACCGGATATT 58.186 29.630 21.30 0.00 28.64 1.28
2997 3791 8.363761 TGGGTTAAAATTTTACAACCGGATAT 57.636 30.769 21.30 0.00 28.64 1.63
2999 3793 6.494146 TCTGGGTTAAAATTTTACAACCGGAT 59.506 34.615 22.03 0.00 29.26 4.18
3006 3800 5.334260 CGCTCGTCTGGGTTAAAATTTTACA 60.334 40.000 10.18 5.08 0.00 2.41
3009 3803 3.610821 GCGCTCGTCTGGGTTAAAATTTT 60.611 43.478 8.75 8.75 0.00 1.82
3017 3811 4.070552 GAGGCGCTCGTCTGGGTT 62.071 66.667 7.64 0.00 0.00 4.11
3083 3878 2.353208 GCCCATGTCCGCACAATTTTTA 60.353 45.455 0.00 0.00 35.64 1.52
3087 3882 2.699768 CGCCCATGTCCGCACAATT 61.700 57.895 0.00 0.00 35.64 2.32
3151 3949 3.971702 GCTGGGTCAGTTGGGCCT 61.972 66.667 4.53 0.00 33.43 5.19
3158 3956 5.013183 GGGAAGTAATATATGCTGGGTCAGT 59.987 44.000 0.00 0.00 33.43 3.41
3176 3976 1.214589 CGACGAACGGATGGGAAGT 59.785 57.895 0.00 0.00 38.46 3.01
3225 4025 3.319198 GACCTTGGGTGGCGGAGA 61.319 66.667 0.00 0.00 35.25 3.71
3240 4050 2.183555 GACGGTGATGGGGACGAC 59.816 66.667 0.00 0.00 0.00 4.34
3262 4080 1.221840 GATCCACTGCCCGTCATGT 59.778 57.895 0.00 0.00 0.00 3.21
3267 4085 3.461773 CTCGGATCCACTGCCCGT 61.462 66.667 13.41 0.00 43.40 5.28
3295 4113 1.818363 CTCGGGTCGACGGATCTGA 60.818 63.158 9.00 5.22 36.31 3.27
3411 4230 2.546494 GGCGCAATGGATTCCCGAG 61.546 63.158 10.83 0.00 34.29 4.63
3428 4247 2.480610 CCATCGCCATTTGGACGGG 61.481 63.158 0.00 0.00 37.39 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.