Multiple sequence alignment - TraesCS1B01G204000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G204000 chr1B 100.000 4587 0 0 1 4587 367985410 367980824 0.000000e+00 8471
1 TraesCS1B01G204000 chr1B 91.663 2627 211 6 3 2623 499422375 499424999 0.000000e+00 3631
2 TraesCS1B01G204000 chr1B 95.495 222 9 1 4367 4587 367923057 367922836 2.030000e-93 353
3 TraesCS1B01G204000 chr1B 93.274 223 14 1 4363 4584 572114929 572115151 1.230000e-85 327
4 TraesCS1B01G204000 chr2B 92.170 2631 193 12 3 2623 717432491 717435118 0.000000e+00 3705
5 TraesCS1B01G204000 chr2B 91.270 504 42 2 2818 3319 454659887 454660390 0.000000e+00 686
6 TraesCS1B01G204000 chr2B 84.135 208 29 4 2618 2822 454588816 454589022 1.010000e-46 198
7 TraesCS1B01G204000 chr2B 86.232 138 11 4 3315 3444 454871617 454871754 4.780000e-30 143
8 TraesCS1B01G204000 chr5B 91.998 2637 192 12 3 2624 700215902 700213270 0.000000e+00 3683
9 TraesCS1B01G204000 chr5B 93.636 220 13 1 4369 4587 438062608 438062389 1.230000e-85 327
10 TraesCS1B01G204000 chr4A 91.869 2632 203 10 3 2624 709676856 709679486 0.000000e+00 3664
11 TraesCS1B01G204000 chr4A 89.314 1516 131 18 2623 4111 706189707 706191218 0.000000e+00 1873
12 TraesCS1B01G204000 chr3B 91.733 2637 199 11 3 2623 796612848 796610215 0.000000e+00 3644
13 TraesCS1B01G204000 chr3B 91.486 2631 208 11 3 2623 658441341 658438717 0.000000e+00 3603
14 TraesCS1B01G204000 chr3B 90.336 745 68 4 2623 3363 174993620 174992876 0.000000e+00 974
15 TraesCS1B01G204000 chr3B 88.992 754 67 8 3371 4111 174988088 174987338 0.000000e+00 918
16 TraesCS1B01G204000 chr4D 91.749 2630 200 15 4 2621 332922400 332925024 0.000000e+00 3639
17 TraesCS1B01G204000 chr4D 91.575 2635 197 18 3 2624 331081699 331084321 0.000000e+00 3613
18 TraesCS1B01G204000 chr7B 91.600 2631 213 5 3 2625 442935623 442932993 0.000000e+00 3627
19 TraesCS1B01G204000 chr7B 95.023 221 11 0 4367 4587 647764228 647764008 9.450000e-92 348
20 TraesCS1B01G204000 chr7B 94.570 221 12 0 4367 4587 79139332 79139552 4.390000e-90 342
21 TraesCS1B01G204000 chr7B 93.665 221 14 0 4367 4587 79204728 79204948 9.510000e-87 331
22 TraesCS1B01G204000 chr7B 93.213 221 15 0 4367 4587 647785564 647785344 4.430000e-85 326
23 TraesCS1B01G204000 chr7A 90.435 460 39 4 3862 4318 32684008 32683551 6.570000e-168 601
24 TraesCS1B01G204000 chr6D 90.968 310 17 6 3144 3444 429377551 429377244 1.540000e-109 407
25 TraesCS1B01G204000 chr6D 90.148 203 18 2 2623 2823 429377752 429377550 3.520000e-66 263
26 TraesCS1B01G204000 chr7D 92.308 286 20 2 4003 4286 32624803 32624518 5.530000e-109 405
27 TraesCS1B01G204000 chr7D 90.625 160 12 3 3852 4009 32630080 32629922 4.650000e-50 209
28 TraesCS1B01G204000 chr6B 93.182 220 14 1 4366 4584 580010193 580010412 5.720000e-84 322
29 TraesCS1B01G204000 chr6B 92.793 222 16 0 4366 4587 615222529 615222308 5.720000e-84 322
30 TraesCS1B01G204000 chr2D 94.444 72 3 1 2827 2897 274428072 274428143 4.850000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G204000 chr1B 367980824 367985410 4586 True 8471 8471 100.000 1 4587 1 chr1B.!!$R2 4586
1 TraesCS1B01G204000 chr1B 499422375 499424999 2624 False 3631 3631 91.663 3 2623 1 chr1B.!!$F1 2620
2 TraesCS1B01G204000 chr2B 717432491 717435118 2627 False 3705 3705 92.170 3 2623 1 chr2B.!!$F4 2620
3 TraesCS1B01G204000 chr2B 454659887 454660390 503 False 686 686 91.270 2818 3319 1 chr2B.!!$F2 501
4 TraesCS1B01G204000 chr5B 700213270 700215902 2632 True 3683 3683 91.998 3 2624 1 chr5B.!!$R2 2621
5 TraesCS1B01G204000 chr4A 709676856 709679486 2630 False 3664 3664 91.869 3 2624 1 chr4A.!!$F2 2621
6 TraesCS1B01G204000 chr4A 706189707 706191218 1511 False 1873 1873 89.314 2623 4111 1 chr4A.!!$F1 1488
7 TraesCS1B01G204000 chr3B 796610215 796612848 2633 True 3644 3644 91.733 3 2623 1 chr3B.!!$R4 2620
8 TraesCS1B01G204000 chr3B 658438717 658441341 2624 True 3603 3603 91.486 3 2623 1 chr3B.!!$R3 2620
9 TraesCS1B01G204000 chr3B 174992876 174993620 744 True 974 974 90.336 2623 3363 1 chr3B.!!$R2 740
10 TraesCS1B01G204000 chr3B 174987338 174988088 750 True 918 918 88.992 3371 4111 1 chr3B.!!$R1 740
11 TraesCS1B01G204000 chr4D 332922400 332925024 2624 False 3639 3639 91.749 4 2621 1 chr4D.!!$F2 2617
12 TraesCS1B01G204000 chr4D 331081699 331084321 2622 False 3613 3613 91.575 3 2624 1 chr4D.!!$F1 2621
13 TraesCS1B01G204000 chr7B 442932993 442935623 2630 True 3627 3627 91.600 3 2625 1 chr7B.!!$R1 2622
14 TraesCS1B01G204000 chr6D 429377244 429377752 508 True 335 407 90.558 2623 3444 2 chr6D.!!$R1 821

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 152 0.811281 GCTAGCCAAAAGTTCCGCAT 59.189 50.0 2.29 0.0 0.00 4.73 F
1118 1145 0.464452 GGGGGAGTTGATACGTCCAG 59.536 60.0 0.00 0.0 31.31 3.86 F
1766 1803 0.106268 ATTGGTGCTTGTGGGTGACA 60.106 50.0 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1688 0.832135 TGATGGAGATAGCCGTCCCC 60.832 60.0 0.0 0.0 42.19 4.81 R
2767 2812 0.610174 TTCTTGCAGCATCTCTCGGT 59.390 50.0 0.0 0.0 0.00 4.69 R
3628 3683 0.465824 AGTCGTAGCCGCTCCATACT 60.466 55.0 0.0 0.0 0.00 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 144 3.633986 CCCCTATCTTTGCTAGCCAAAAG 59.366 47.826 17.37 17.37 42.51 2.27
150 152 0.811281 GCTAGCCAAAAGTTCCGCAT 59.189 50.000 2.29 0.00 0.00 4.73
182 184 7.016153 AGATACTACTTGTGGATCCAAAACA 57.984 36.000 18.20 7.84 0.00 2.83
232 237 4.019321 CCACCATACCTACCTATGGATTGG 60.019 50.000 11.41 6.41 44.35 3.16
271 277 2.420022 AGTTGTCATCGGTGCAATAAGC 59.580 45.455 8.42 0.00 45.96 3.09
296 306 7.746034 GCCAATAAAAATTGCTTCTAAAAGTGC 59.254 33.333 0.00 0.00 34.79 4.40
299 309 8.986477 ATAAAAATTGCTTCTAAAAGTGCGAT 57.014 26.923 0.00 0.00 34.79 4.58
307 317 7.409697 TGCTTCTAAAAGTGCGATATCATTTC 58.590 34.615 3.12 0.00 34.79 2.17
334 347 4.553330 AGGGATTGAGTGTTGTACGAAT 57.447 40.909 0.00 0.00 0.00 3.34
344 357 4.819630 AGTGTTGTACGAATTTGTGATGGT 59.180 37.500 8.70 0.00 0.00 3.55
359 372 4.759693 TGTGATGGTGAAGAATAAAAGCGT 59.240 37.500 0.00 0.00 0.00 5.07
416 429 6.292919 GGGCAATATAACGTGACATTCTCTTC 60.293 42.308 0.00 0.00 0.00 2.87
453 466 3.428198 GCATACAAACAAAAAGCGCATGA 59.572 39.130 11.47 0.00 0.00 3.07
473 486 2.769095 GACAACCTCTGCTTCCCTCTAT 59.231 50.000 0.00 0.00 0.00 1.98
565 581 5.385509 TTTATTTTCTCCTTTGGGAAGCG 57.614 39.130 0.00 0.00 41.69 4.68
588 609 5.112686 GTCATGTGGTGAGGAAAGATCTAC 58.887 45.833 0.00 0.00 37.56 2.59
589 610 4.777366 TCATGTGGTGAGGAAAGATCTACA 59.223 41.667 0.00 0.00 31.80 2.74
665 686 2.531771 TGAGGTGAATACGTTGGGAGA 58.468 47.619 0.00 0.00 0.00 3.71
719 740 3.730715 CCAGTTGAAACGTTTTGCTCATC 59.269 43.478 15.89 7.71 0.00 2.92
782 804 2.488153 GGTTGAGTATGTGAACTTGCCC 59.512 50.000 0.00 0.00 0.00 5.36
790 814 1.761784 TGTGAACTTGCCCAAATGCTT 59.238 42.857 0.00 0.00 0.00 3.91
804 828 2.779755 ATGCTTTGATACGTGACCCA 57.220 45.000 0.00 0.00 0.00 4.51
819 843 4.335416 GTGACCCATCCTGAAAAGATGAA 58.665 43.478 2.39 0.00 43.15 2.57
913 937 9.814899 TTTGATGTTGTGATGAATTGTTACTTT 57.185 25.926 0.00 0.00 0.00 2.66
1033 1060 5.934935 TTTGTTTTTATCGACACCTCTCC 57.065 39.130 0.00 0.00 0.00 3.71
1118 1145 0.464452 GGGGGAGTTGATACGTCCAG 59.536 60.000 0.00 0.00 31.31 3.86
1121 1148 2.762327 GGGGAGTTGATACGTCCAGTTA 59.238 50.000 0.00 0.00 31.31 2.24
1271 1298 4.640771 ATCTGGACCTGAAAAAGCTACA 57.359 40.909 5.03 0.00 0.00 2.74
1365 1395 8.934023 AGAATTTTGGAGTCAATAAGTACCAA 57.066 30.769 0.00 0.00 35.95 3.67
1451 1482 3.185203 TGCTCACCCAGGCCCTTT 61.185 61.111 0.00 0.00 0.00 3.11
1452 1483 2.677875 GCTCACCCAGGCCCTTTG 60.678 66.667 0.00 0.00 0.00 2.77
1564 1598 1.425448 ACCTAGGCAGGAGCACTTTTT 59.575 47.619 9.30 0.00 45.91 1.94
1571 1605 1.149101 AGGAGCACTTTTTCCCTCCA 58.851 50.000 8.11 0.00 44.95 3.86
1650 1685 3.843619 TCATCACCAACAACTCTCCCATA 59.156 43.478 0.00 0.00 0.00 2.74
1653 1688 3.007940 TCACCAACAACTCTCCCATACTG 59.992 47.826 0.00 0.00 0.00 2.74
1692 1729 6.072008 CCATCAACATCTTCAACAACACCATA 60.072 38.462 0.00 0.00 0.00 2.74
1697 1734 6.248433 ACATCTTCAACAACACCATATCCTT 58.752 36.000 0.00 0.00 0.00 3.36
1720 1757 6.433847 TTCAAACCCTAGTTCATCTCTTGA 57.566 37.500 0.00 0.00 34.19 3.02
1766 1803 0.106268 ATTGGTGCTTGTGGGTGACA 60.106 50.000 0.00 0.00 0.00 3.58
1923 1961 0.530744 TGAGGTCACGGGAGAAATCG 59.469 55.000 0.00 0.00 0.00 3.34
1961 1999 5.839262 TGTGAACTTGATATGTGTTCGAC 57.161 39.130 0.00 0.00 41.88 4.20
1971 2009 6.784176 TGATATGTGTTCGACATTTTGATGG 58.216 36.000 0.00 0.00 43.20 3.51
2050 2088 3.833559 CCATATTTGGGCCTAAGGGAT 57.166 47.619 4.53 0.00 39.56 3.85
2140 2182 4.022589 CGCTATTCTGTAAGGGACCGATTA 60.023 45.833 0.00 0.00 0.00 1.75
2164 2206 6.809869 AGATCCAAAAGTTTAATGCTATGGC 58.190 36.000 0.00 0.00 39.26 4.40
2312 2354 5.493133 AAGTAGCAAACACGAATCAAACA 57.507 34.783 0.00 0.00 0.00 2.83
2314 2356 5.270853 AGTAGCAAACACGAATCAAACAAC 58.729 37.500 0.00 0.00 0.00 3.32
2318 2360 4.979197 GCAAACACGAATCAAACAACCATA 59.021 37.500 0.00 0.00 0.00 2.74
2328 2370 5.766150 TCAAACAACCATAGTGAAAGTGG 57.234 39.130 0.00 0.00 38.96 4.00
2337 2379 5.053145 CCATAGTGAAAGTGGCTAGATGAC 58.947 45.833 0.00 0.00 0.00 3.06
2358 2400 1.946984 TTCCCGTGTACCCTCAAGAT 58.053 50.000 0.00 0.00 0.00 2.40
2378 2420 7.988737 CAAGATCACCTTGCTTATCATAACAA 58.011 34.615 0.00 0.00 44.90 2.83
2496 2539 6.095860 TGCTATCAAACTACTCCGCTACTTAA 59.904 38.462 0.00 0.00 0.00 1.85
2641 2684 3.407967 GGATCGACAAGGGGCCCA 61.408 66.667 27.72 1.98 0.00 5.36
2648 2691 0.331616 GACAAGGGGCCCAACTGTAT 59.668 55.000 27.72 3.71 0.00 2.29
2650 2693 1.149077 ACAAGGGGCCCAACTGTATTT 59.851 47.619 27.72 4.15 0.00 1.40
2673 2718 1.475403 TACTAGAGGAGCCACTGTGC 58.525 55.000 1.29 0.00 0.00 4.57
2675 2720 1.599606 CTAGAGGAGCCACTGTGCGT 61.600 60.000 1.29 0.00 36.02 5.24
2729 2774 1.770110 AGCTTCCACTGGTCCACCA 60.770 57.895 0.00 0.00 45.30 4.17
2734 2779 2.361610 CACTGGTCCACCATGGGC 60.362 66.667 18.09 2.98 46.46 5.36
2745 2790 3.207669 CATGGGCGCTTCAGGCTC 61.208 66.667 7.64 0.00 39.13 4.70
2758 2803 0.824109 CAGGCTCTGGTGATTACGGA 59.176 55.000 0.00 0.00 0.00 4.69
2767 2812 5.492895 TCTGGTGATTACGGAAAATTAGCA 58.507 37.500 0.00 0.00 33.49 3.49
2774 2819 2.618053 ACGGAAAATTAGCACCGAGAG 58.382 47.619 11.27 0.00 46.94 3.20
2807 2852 2.293170 TCATCGGCAAGTGTTGTTTCA 58.707 42.857 0.00 0.00 0.00 2.69
2825 2870 1.613630 ACTGGGAAGGCATCGGTCT 60.614 57.895 0.00 0.00 0.00 3.85
2948 2994 5.762179 AGGTCAGATTAATGGTCAAGACA 57.238 39.130 2.29 0.00 0.00 3.41
2968 3014 4.934356 ACAAGCCTAATTGAAATGAGGGA 58.066 39.130 8.30 0.00 37.49 4.20
3041 3087 7.454380 TGTTAAATGTCAGAATTCCTTTCCCAT 59.546 33.333 0.65 0.00 34.67 4.00
3064 3110 0.321653 AGCTTAAGCAGTGGGAACGG 60.322 55.000 28.39 0.00 45.16 4.44
3086 3132 8.625786 ACGGAAGTACTGTAAACCAAATAATT 57.374 30.769 0.00 0.00 46.88 1.40
3087 3133 8.508875 ACGGAAGTACTGTAAACCAAATAATTG 58.491 33.333 0.00 0.00 46.88 2.32
3119 3165 1.352017 ACAAGATGCATGTCAGGGTCA 59.648 47.619 2.46 0.00 0.00 4.02
3140 3186 4.122046 CAGTGACACAGTTCAAGTCATCA 58.878 43.478 8.59 0.00 43.35 3.07
3313 3360 1.270907 AACTTCTCTCCATGCGACCT 58.729 50.000 0.00 0.00 0.00 3.85
3325 3372 2.348998 CGACCTTGCCTCTTGCCT 59.651 61.111 0.00 0.00 40.16 4.75
3332 3379 0.828762 TTGCCTCTTGCCTTGCATGT 60.829 50.000 0.00 0.00 38.76 3.21
3347 3394 1.872952 GCATGTGCGCATATGTTCCTA 59.127 47.619 36.83 9.22 33.21 2.94
3363 3410 5.560724 TGTTCCTAGCAAGAGCATAGTTTT 58.439 37.500 0.00 0.00 45.49 2.43
3365 3412 6.594159 TGTTCCTAGCAAGAGCATAGTTTTAC 59.406 38.462 0.00 0.00 45.49 2.01
3367 3414 6.947464 TCCTAGCAAGAGCATAGTTTTACTT 58.053 36.000 0.00 0.00 45.49 2.24
3368 3415 7.394816 TCCTAGCAAGAGCATAGTTTTACTTT 58.605 34.615 0.00 0.00 45.49 2.66
3369 3416 7.334421 TCCTAGCAAGAGCATAGTTTTACTTTG 59.666 37.037 0.00 0.00 45.49 2.77
3370 3417 6.259550 AGCAAGAGCATAGTTTTACTTTGG 57.740 37.500 0.00 0.00 45.49 3.28
3371 3418 5.770162 AGCAAGAGCATAGTTTTACTTTGGT 59.230 36.000 2.42 2.42 45.49 3.67
3372 3419 6.265422 AGCAAGAGCATAGTTTTACTTTGGTT 59.735 34.615 4.06 0.00 45.49 3.67
3374 3421 8.244113 GCAAGAGCATAGTTTTACTTTGGTTAT 58.756 33.333 4.06 0.00 37.85 1.89
3404 3459 7.116736 ACGGTATTTCAGATATTCCTTTGGTT 58.883 34.615 0.00 0.00 0.00 3.67
3476 3531 2.719739 AGAACATGATGAGCAGGGTTG 58.280 47.619 0.00 0.00 30.79 3.77
3479 3534 0.256752 CATGATGAGCAGGGTTGGGA 59.743 55.000 0.00 0.00 0.00 4.37
3528 3583 4.158025 GGTTCACTACCTGAAGAAGATCGA 59.842 45.833 0.00 0.00 44.10 3.59
3552 3607 6.749139 ACGTAGTGATGTGCAATGTAGATAT 58.251 36.000 0.00 0.00 42.51 1.63
3556 3611 6.594744 AGTGATGTGCAATGTAGATATCCAA 58.405 36.000 0.00 0.00 0.00 3.53
3583 3638 6.772233 TGAAGGTGTTCAATGAAAGAGATTCA 59.228 34.615 0.00 2.97 43.67 2.57
3602 3657 9.929722 GAGATTCATAGTCATCATCGTAGTATC 57.070 37.037 0.00 0.00 0.00 2.24
3618 3673 3.273434 AGTATCGAAATGCTGCACATGT 58.727 40.909 3.57 0.00 39.60 3.21
3648 3703 1.202734 AGTATGGAGCGGCTACGACTA 60.203 52.381 15.76 1.98 44.60 2.59
3669 3724 7.540474 ACTATAAGTGGAGGTGGTGTATATG 57.460 40.000 0.00 0.00 0.00 1.78
3738 3796 9.554724 GATTTTAATCAAATCTCGCTTGTTGTA 57.445 29.630 0.88 0.00 45.30 2.41
3746 3804 8.015087 TCAAATCTCGCTTGTTGTATAAGTTTG 58.985 33.333 0.00 0.00 0.00 2.93
3751 3809 4.555708 CGCTTGTTGTATAAGTTTGTGCCA 60.556 41.667 0.00 0.00 0.00 4.92
3772 3832 5.527214 GCCAATAAATTTGCAGGGATAAACC 59.473 40.000 0.00 0.00 38.08 3.27
3773 3833 5.752955 CCAATAAATTTGCAGGGATAAACCG 59.247 40.000 0.00 0.00 40.11 4.44
3774 3834 2.959507 AATTTGCAGGGATAAACCGC 57.040 45.000 0.00 0.00 40.11 5.68
3775 3835 0.738389 ATTTGCAGGGATAAACCGCG 59.262 50.000 0.00 0.00 40.11 6.46
3776 3836 1.309499 TTTGCAGGGATAAACCGCGG 61.309 55.000 26.86 26.86 40.11 6.46
3778 3838 2.203153 CAGGGATAAACCGCGGGG 60.203 66.667 31.76 18.33 40.11 5.73
3779 3839 3.485745 AGGGATAAACCGCGGGGG 61.486 66.667 31.76 9.88 43.62 5.40
3793 3853 4.821935 GGGGGTGACTTGTTCCAG 57.178 61.111 0.00 0.00 0.00 3.86
3798 3858 1.351017 GGGTGACTTGTTCCAGATGGA 59.649 52.381 0.00 0.00 43.73 3.41
3800 3860 3.012518 GGTGACTTGTTCCAGATGGATG 58.987 50.000 1.61 0.00 44.98 3.51
3801 3861 3.307691 GGTGACTTGTTCCAGATGGATGA 60.308 47.826 1.61 0.00 44.98 2.92
3813 3873 6.537355 TCCAGATGGATGAATTGGAGTATTC 58.463 40.000 0.00 0.00 39.78 1.75
3888 3951 1.745087 CCACGAGCATTAAACATGGCT 59.255 47.619 0.00 0.00 39.75 4.75
3893 3956 3.609373 CGAGCATTAAACATGGCTTTGTG 59.391 43.478 0.00 0.00 36.59 3.33
3896 3959 5.172934 AGCATTAAACATGGCTTTGTGATG 58.827 37.500 0.00 0.00 31.34 3.07
3899 3962 2.995466 AACATGGCTTTGTGATGTCG 57.005 45.000 0.00 0.00 29.93 4.35
3912 3975 1.207811 TGATGTCGCACCATCAGATGT 59.792 47.619 9.64 0.00 44.70 3.06
3913 3976 2.430332 TGATGTCGCACCATCAGATGTA 59.570 45.455 9.64 0.00 44.70 2.29
3930 3993 7.770201 TCAGATGTAAGATTGAGTCTCTTGAG 58.230 38.462 0.65 0.00 35.67 3.02
3956 4019 7.687941 AGATTAATGTTGTTTACTGACTGGG 57.312 36.000 0.00 0.00 0.00 4.45
4033 4102 5.652452 TCTCGTTTGAGACTCCATCTTATCA 59.348 40.000 0.00 0.00 46.25 2.15
4121 4191 6.944096 AGTGTTACTGAATACTTTCCCTACC 58.056 40.000 0.00 0.00 33.57 3.18
4122 4192 6.729569 AGTGTTACTGAATACTTTCCCTACCT 59.270 38.462 0.00 0.00 33.57 3.08
4123 4193 7.237055 AGTGTTACTGAATACTTTCCCTACCTT 59.763 37.037 0.00 0.00 33.57 3.50
4124 4194 7.333672 GTGTTACTGAATACTTTCCCTACCTTG 59.666 40.741 0.00 0.00 0.00 3.61
4125 4195 5.437191 ACTGAATACTTTCCCTACCTTGG 57.563 43.478 0.00 0.00 0.00 3.61
4126 4196 5.098663 ACTGAATACTTTCCCTACCTTGGA 58.901 41.667 0.00 0.00 0.00 3.53
4127 4197 5.550403 ACTGAATACTTTCCCTACCTTGGAA 59.450 40.000 0.00 0.00 40.08 3.53
4128 4198 6.045106 ACTGAATACTTTCCCTACCTTGGAAA 59.955 38.462 4.56 4.56 46.81 3.13
4134 4204 3.449746 TCCCTACCTTGGAAAATGTGG 57.550 47.619 0.00 0.00 0.00 4.17
4135 4205 2.990284 TCCCTACCTTGGAAAATGTGGA 59.010 45.455 0.00 0.00 0.00 4.02
4136 4206 3.399644 TCCCTACCTTGGAAAATGTGGAA 59.600 43.478 0.00 0.00 0.00 3.53
4137 4207 4.140900 TCCCTACCTTGGAAAATGTGGAAA 60.141 41.667 0.00 0.00 0.00 3.13
4138 4208 4.591072 CCCTACCTTGGAAAATGTGGAAAA 59.409 41.667 0.00 0.00 0.00 2.29
4139 4209 5.071115 CCCTACCTTGGAAAATGTGGAAAAA 59.929 40.000 0.00 0.00 0.00 1.94
4140 4210 6.239858 CCCTACCTTGGAAAATGTGGAAAAAT 60.240 38.462 0.00 0.00 0.00 1.82
4141 4211 7.038658 CCCTACCTTGGAAAATGTGGAAAAATA 60.039 37.037 0.00 0.00 0.00 1.40
4142 4212 7.817478 CCTACCTTGGAAAATGTGGAAAAATAC 59.183 37.037 0.00 0.00 0.00 1.89
4143 4213 7.130681 ACCTTGGAAAATGTGGAAAAATACA 57.869 32.000 0.00 0.00 0.00 2.29
4144 4214 7.744733 ACCTTGGAAAATGTGGAAAAATACAT 58.255 30.769 0.00 0.00 0.00 2.29
4145 4215 8.217111 ACCTTGGAAAATGTGGAAAAATACATT 58.783 29.630 0.00 0.00 0.00 2.71
4146 4216 9.065798 CCTTGGAAAATGTGGAAAAATACATTT 57.934 29.630 8.94 8.94 0.00 2.32
4180 4250 7.572523 TGGTTTTATAGCAAATCTCATGAGG 57.427 36.000 22.42 7.57 0.00 3.86
4181 4251 7.345691 TGGTTTTATAGCAAATCTCATGAGGA 58.654 34.615 22.42 9.81 0.00 3.71
4182 4252 7.500227 TGGTTTTATAGCAAATCTCATGAGGAG 59.500 37.037 22.42 10.82 45.49 3.69
4183 4253 7.358830 GTTTTATAGCAAATCTCATGAGGAGC 58.641 38.462 22.42 18.90 43.70 4.70
4184 4254 1.950828 AGCAAATCTCATGAGGAGCG 58.049 50.000 22.42 10.25 43.70 5.03
4185 4255 0.942962 GCAAATCTCATGAGGAGCGG 59.057 55.000 22.42 9.84 43.70 5.52
4186 4256 0.942962 CAAATCTCATGAGGAGCGGC 59.057 55.000 22.42 0.00 43.70 6.53
4187 4257 0.835941 AAATCTCATGAGGAGCGGCT 59.164 50.000 22.42 0.00 43.70 5.52
4188 4258 0.392336 AATCTCATGAGGAGCGGCTC 59.608 55.000 22.42 21.57 43.70 4.70
4189 4259 0.758310 ATCTCATGAGGAGCGGCTCA 60.758 55.000 29.33 12.36 43.70 4.26
4190 4260 0.758310 TCTCATGAGGAGCGGCTCAT 60.758 55.000 29.33 24.32 43.70 2.90
4191 4261 0.964700 CTCATGAGGAGCGGCTCATA 59.035 55.000 29.33 15.89 38.14 2.15
4192 4262 1.549620 CTCATGAGGAGCGGCTCATAT 59.450 52.381 29.33 17.31 38.14 1.78
4193 4263 1.547820 TCATGAGGAGCGGCTCATATC 59.452 52.381 29.33 22.52 38.14 1.63
4194 4264 1.549620 CATGAGGAGCGGCTCATATCT 59.450 52.381 29.33 17.79 38.14 1.98
4195 4265 1.709578 TGAGGAGCGGCTCATATCTT 58.290 50.000 29.33 8.85 31.08 2.40
4196 4266 2.042464 TGAGGAGCGGCTCATATCTTT 58.958 47.619 29.33 7.20 31.08 2.52
4197 4267 2.435805 TGAGGAGCGGCTCATATCTTTT 59.564 45.455 29.33 5.89 31.08 2.27
4198 4268 3.118261 TGAGGAGCGGCTCATATCTTTTT 60.118 43.478 29.33 4.91 31.08 1.94
4199 4269 3.471680 AGGAGCGGCTCATATCTTTTTC 58.528 45.455 29.33 9.54 31.08 2.29
4200 4270 2.550180 GGAGCGGCTCATATCTTTTTCC 59.450 50.000 29.33 6.53 31.08 3.13
4201 4271 2.213499 AGCGGCTCATATCTTTTTCCG 58.787 47.619 0.00 0.00 38.51 4.30
4202 4272 1.940613 GCGGCTCATATCTTTTTCCGT 59.059 47.619 0.00 0.00 37.86 4.69
4203 4273 2.032808 GCGGCTCATATCTTTTTCCGTC 60.033 50.000 0.00 0.00 37.86 4.79
4204 4274 3.194861 CGGCTCATATCTTTTTCCGTCA 58.805 45.455 0.00 0.00 0.00 4.35
4205 4275 3.621268 CGGCTCATATCTTTTTCCGTCAA 59.379 43.478 0.00 0.00 0.00 3.18
4206 4276 4.260375 CGGCTCATATCTTTTTCCGTCAAG 60.260 45.833 0.00 0.00 0.00 3.02
4207 4277 4.636206 GGCTCATATCTTTTTCCGTCAAGT 59.364 41.667 0.00 0.00 0.00 3.16
4208 4278 5.220681 GGCTCATATCTTTTTCCGTCAAGTC 60.221 44.000 0.00 0.00 0.00 3.01
4209 4279 5.351465 GCTCATATCTTTTTCCGTCAAGTCA 59.649 40.000 0.00 0.00 0.00 3.41
4210 4280 6.037610 GCTCATATCTTTTTCCGTCAAGTCAT 59.962 38.462 0.00 0.00 0.00 3.06
4211 4281 7.224753 GCTCATATCTTTTTCCGTCAAGTCATA 59.775 37.037 0.00 0.00 0.00 2.15
4212 4282 8.420374 TCATATCTTTTTCCGTCAAGTCATAC 57.580 34.615 0.00 0.00 0.00 2.39
4213 4283 8.038351 TCATATCTTTTTCCGTCAAGTCATACA 58.962 33.333 0.00 0.00 0.00 2.29
4214 4284 8.664798 CATATCTTTTTCCGTCAAGTCATACAA 58.335 33.333 0.00 0.00 0.00 2.41
4215 4285 7.687941 ATCTTTTTCCGTCAAGTCATACAAT 57.312 32.000 0.00 0.00 0.00 2.71
4216 4286 7.504924 TCTTTTTCCGTCAAGTCATACAATT 57.495 32.000 0.00 0.00 0.00 2.32
4217 4287 7.936584 TCTTTTTCCGTCAAGTCATACAATTT 58.063 30.769 0.00 0.00 0.00 1.82
4218 4288 8.410141 TCTTTTTCCGTCAAGTCATACAATTTT 58.590 29.630 0.00 0.00 0.00 1.82
4219 4289 8.934507 TTTTTCCGTCAAGTCATACAATTTTT 57.065 26.923 0.00 0.00 0.00 1.94
4240 4310 6.855763 TTTTCGTTAGGATAGAAGGGTACA 57.144 37.500 0.00 0.00 0.00 2.90
4241 4311 7.427989 TTTTCGTTAGGATAGAAGGGTACAT 57.572 36.000 0.00 0.00 0.00 2.29
4242 4312 6.401047 TTCGTTAGGATAGAAGGGTACATG 57.599 41.667 0.00 0.00 0.00 3.21
4243 4313 5.452255 TCGTTAGGATAGAAGGGTACATGT 58.548 41.667 2.69 2.69 0.00 3.21
4244 4314 6.604171 TCGTTAGGATAGAAGGGTACATGTA 58.396 40.000 0.08 0.08 0.00 2.29
4245 4315 7.236529 TCGTTAGGATAGAAGGGTACATGTAT 58.763 38.462 9.18 0.00 0.00 2.29
4246 4316 7.727186 TCGTTAGGATAGAAGGGTACATGTATT 59.273 37.037 9.18 0.00 0.00 1.89
4247 4317 7.813148 CGTTAGGATAGAAGGGTACATGTATTG 59.187 40.741 9.18 0.00 0.00 1.90
4248 4318 6.688073 AGGATAGAAGGGTACATGTATTGG 57.312 41.667 9.18 0.00 0.00 3.16
4249 4319 6.151049 AGGATAGAAGGGTACATGTATTGGT 58.849 40.000 9.18 0.00 0.00 3.67
4250 4320 6.619852 AGGATAGAAGGGTACATGTATTGGTT 59.380 38.462 9.18 0.92 0.00 3.67
4251 4321 6.710744 GGATAGAAGGGTACATGTATTGGTTG 59.289 42.308 9.18 0.00 0.00 3.77
4252 4322 4.270008 AGAAGGGTACATGTATTGGTTGC 58.730 43.478 9.18 0.00 0.00 4.17
4253 4323 4.018415 AGAAGGGTACATGTATTGGTTGCT 60.018 41.667 9.18 0.00 0.00 3.91
4254 4324 4.316025 AGGGTACATGTATTGGTTGCTT 57.684 40.909 9.18 0.00 0.00 3.91
4255 4325 4.016444 AGGGTACATGTATTGGTTGCTTG 58.984 43.478 9.18 0.00 0.00 4.01
4256 4326 3.428862 GGGTACATGTATTGGTTGCTTGC 60.429 47.826 9.18 0.00 0.00 4.01
4257 4327 3.443681 GGTACATGTATTGGTTGCTTGCT 59.556 43.478 9.18 0.00 0.00 3.91
4258 4328 4.082245 GGTACATGTATTGGTTGCTTGCTT 60.082 41.667 9.18 0.00 0.00 3.91
4259 4329 4.178545 ACATGTATTGGTTGCTTGCTTC 57.821 40.909 0.00 0.00 0.00 3.86
4260 4330 3.573538 ACATGTATTGGTTGCTTGCTTCA 59.426 39.130 0.00 0.00 0.00 3.02
4261 4331 3.641437 TGTATTGGTTGCTTGCTTCAC 57.359 42.857 0.00 0.00 0.00 3.18
4262 4332 2.031245 TGTATTGGTTGCTTGCTTCACG 60.031 45.455 0.00 0.00 0.00 4.35
4263 4333 1.317613 ATTGGTTGCTTGCTTCACGA 58.682 45.000 0.00 0.00 0.00 4.35
4264 4334 0.662619 TTGGTTGCTTGCTTCACGAG 59.337 50.000 0.00 0.00 0.00 4.18
4265 4335 0.463654 TGGTTGCTTGCTTCACGAGT 60.464 50.000 0.00 0.00 31.61 4.18
4266 4336 0.663153 GGTTGCTTGCTTCACGAGTT 59.337 50.000 0.00 0.00 31.61 3.01
4267 4337 1.871039 GGTTGCTTGCTTCACGAGTTA 59.129 47.619 0.00 0.00 31.61 2.24
4268 4338 2.289547 GGTTGCTTGCTTCACGAGTTAA 59.710 45.455 0.00 0.00 31.61 2.01
4269 4339 3.058224 GGTTGCTTGCTTCACGAGTTAAT 60.058 43.478 0.00 0.00 31.61 1.40
4270 4340 4.153475 GGTTGCTTGCTTCACGAGTTAATA 59.847 41.667 0.00 0.00 31.61 0.98
4271 4341 5.334569 GGTTGCTTGCTTCACGAGTTAATAA 60.335 40.000 0.00 0.00 31.61 1.40
4272 4342 6.314784 GTTGCTTGCTTCACGAGTTAATAAT 58.685 36.000 0.00 0.00 31.61 1.28
4273 4343 5.868257 TGCTTGCTTCACGAGTTAATAATG 58.132 37.500 0.00 0.00 31.61 1.90
4274 4344 5.163764 TGCTTGCTTCACGAGTTAATAATGG 60.164 40.000 0.00 0.00 31.61 3.16
4275 4345 5.064707 GCTTGCTTCACGAGTTAATAATGGA 59.935 40.000 0.00 0.00 31.61 3.41
4276 4346 6.417191 TTGCTTCACGAGTTAATAATGGAC 57.583 37.500 0.00 0.00 0.00 4.02
4277 4347 5.483811 TGCTTCACGAGTTAATAATGGACA 58.516 37.500 0.00 0.00 0.00 4.02
4278 4348 5.350365 TGCTTCACGAGTTAATAATGGACAC 59.650 40.000 0.00 0.00 0.00 3.67
4279 4349 5.500290 GCTTCACGAGTTAATAATGGACACG 60.500 44.000 0.00 0.00 34.38 4.49
4280 4350 4.426416 TCACGAGTTAATAATGGACACGG 58.574 43.478 0.00 0.00 32.88 4.94
4281 4351 4.082081 TCACGAGTTAATAATGGACACGGT 60.082 41.667 0.00 0.00 32.88 4.83
4282 4352 4.032445 CACGAGTTAATAATGGACACGGTG 59.968 45.833 6.58 6.58 32.88 4.94
4283 4353 3.000925 CGAGTTAATAATGGACACGGTGC 59.999 47.826 8.30 0.93 0.00 5.01
4284 4354 3.275999 AGTTAATAATGGACACGGTGCC 58.724 45.455 8.30 10.99 0.00 5.01
4285 4355 3.011119 GTTAATAATGGACACGGTGCCA 58.989 45.455 20.96 20.96 38.78 4.92
4286 4356 2.208132 AATAATGGACACGGTGCCAA 57.792 45.000 22.02 11.49 37.78 4.52
4287 4357 1.459450 ATAATGGACACGGTGCCAAC 58.541 50.000 22.02 6.68 37.78 3.77
4288 4358 0.108774 TAATGGACACGGTGCCAACA 59.891 50.000 22.02 13.19 37.78 3.33
4289 4359 1.172180 AATGGACACGGTGCCAACAG 61.172 55.000 22.02 0.00 37.78 3.16
4290 4360 3.660111 GGACACGGTGCCAACAGC 61.660 66.667 8.30 0.00 44.14 4.40
4303 4373 3.961182 GCCAACAGCACATGAGATATTG 58.039 45.455 0.00 0.00 42.97 1.90
4304 4374 3.628942 GCCAACAGCACATGAGATATTGA 59.371 43.478 0.79 0.00 42.97 2.57
4305 4375 4.096833 GCCAACAGCACATGAGATATTGAA 59.903 41.667 0.79 0.00 42.97 2.69
4306 4376 5.221185 GCCAACAGCACATGAGATATTGAAT 60.221 40.000 0.79 0.00 42.97 2.57
4307 4377 6.682113 GCCAACAGCACATGAGATATTGAATT 60.682 38.462 0.79 0.00 42.97 2.17
4308 4378 7.262772 CCAACAGCACATGAGATATTGAATTT 58.737 34.615 0.79 0.00 0.00 1.82
4309 4379 7.222031 CCAACAGCACATGAGATATTGAATTTG 59.778 37.037 0.79 0.00 0.00 2.32
4310 4380 6.270815 ACAGCACATGAGATATTGAATTTGC 58.729 36.000 0.00 0.00 0.00 3.68
4311 4381 5.690409 CAGCACATGAGATATTGAATTTGCC 59.310 40.000 0.00 0.00 0.00 4.52
4312 4382 5.597182 AGCACATGAGATATTGAATTTGCCT 59.403 36.000 0.00 0.00 0.00 4.75
4313 4383 6.097839 AGCACATGAGATATTGAATTTGCCTT 59.902 34.615 0.00 0.00 0.00 4.35
4314 4384 6.420008 GCACATGAGATATTGAATTTGCCTTC 59.580 38.462 0.00 0.00 0.00 3.46
4315 4385 7.683704 GCACATGAGATATTGAATTTGCCTTCT 60.684 37.037 0.00 0.00 0.00 2.85
4316 4386 8.195436 CACATGAGATATTGAATTTGCCTTCTT 58.805 33.333 0.00 0.00 0.00 2.52
4317 4387 8.195436 ACATGAGATATTGAATTTGCCTTCTTG 58.805 33.333 0.00 0.00 0.00 3.02
4318 4388 7.104043 TGAGATATTGAATTTGCCTTCTTGG 57.896 36.000 0.00 0.00 39.35 3.61
4347 4417 2.766651 GGGAGGTGGGGCGACATA 60.767 66.667 0.00 0.00 0.00 2.29
4348 4418 2.808206 GGGAGGTGGGGCGACATAG 61.808 68.421 0.00 0.00 0.00 2.23
4349 4419 2.808206 GGAGGTGGGGCGACATAGG 61.808 68.421 0.00 0.00 0.00 2.57
4350 4420 3.462199 GAGGTGGGGCGACATAGGC 62.462 68.421 0.00 0.00 0.00 3.93
4351 4421 4.910585 GGTGGGGCGACATAGGCG 62.911 72.222 0.00 0.00 37.59 5.52
4352 4422 3.845259 GTGGGGCGACATAGGCGA 61.845 66.667 0.00 0.00 37.59 5.54
4353 4423 3.078196 TGGGGCGACATAGGCGAA 61.078 61.111 0.00 0.00 37.59 4.70
4354 4424 2.188469 GGGGCGACATAGGCGAAA 59.812 61.111 0.00 0.00 37.59 3.46
4355 4425 2.178235 GGGGCGACATAGGCGAAAC 61.178 63.158 0.00 0.00 37.59 2.78
4356 4426 1.448893 GGGCGACATAGGCGAAACA 60.449 57.895 0.00 0.00 37.59 2.83
4357 4427 1.702491 GGGCGACATAGGCGAAACAC 61.702 60.000 0.00 0.00 37.59 3.32
4358 4428 1.343821 GCGACATAGGCGAAACACG 59.656 57.895 0.00 0.00 45.66 4.49
4367 4437 2.168621 CGAAACACGCGCTCACTG 59.831 61.111 5.73 0.00 34.51 3.66
4368 4438 2.300066 CGAAACACGCGCTCACTGA 61.300 57.895 5.73 0.00 34.51 3.41
4369 4439 1.617755 CGAAACACGCGCTCACTGAT 61.618 55.000 5.73 0.00 34.51 2.90
4370 4440 0.179240 GAAACACGCGCTCACTGATG 60.179 55.000 5.73 0.00 0.00 3.07
4371 4441 0.599991 AAACACGCGCTCACTGATGA 60.600 50.000 5.73 0.00 0.00 2.92
4386 4456 6.726379 TCACTGATGAGGATATAGACCTAGG 58.274 44.000 7.41 7.41 37.93 3.02
4387 4457 5.890985 CACTGATGAGGATATAGACCTAGGG 59.109 48.000 14.81 0.00 37.93 3.53
4388 4458 5.557939 ACTGATGAGGATATAGACCTAGGGT 59.442 44.000 14.81 2.03 39.44 4.34
4389 4459 6.740960 ACTGATGAGGATATAGACCTAGGGTA 59.259 42.308 14.81 4.55 35.25 3.69
4390 4460 7.092174 ACTGATGAGGATATAGACCTAGGGTAG 60.092 44.444 14.81 0.00 35.25 3.18
4400 4470 1.939980 CCTAGGGTAGGGTCATAGGC 58.060 60.000 0.00 0.00 42.42 3.93
4401 4471 1.552719 CCTAGGGTAGGGTCATAGGCC 60.553 61.905 0.00 0.00 42.42 5.19
4402 4472 1.433592 CTAGGGTAGGGTCATAGGCCT 59.566 57.143 11.78 11.78 0.00 5.19
4403 4473 0.104934 AGGGTAGGGTCATAGGCCTG 60.105 60.000 17.99 0.00 0.00 4.85
4404 4474 0.105142 GGGTAGGGTCATAGGCCTGA 60.105 60.000 17.99 2.17 0.00 3.86
4405 4475 1.049402 GGTAGGGTCATAGGCCTGAC 58.951 60.000 17.99 16.31 43.90 3.51
4419 4489 3.372897 GGCCTGACCTATATACCCTACC 58.627 54.545 0.00 0.00 34.51 3.18
4420 4490 3.372897 GCCTGACCTATATACCCTACCC 58.627 54.545 0.00 0.00 0.00 3.69
4421 4491 3.245875 GCCTGACCTATATACCCTACCCA 60.246 52.174 0.00 0.00 0.00 4.51
4422 4492 4.758283 GCCTGACCTATATACCCTACCCAA 60.758 50.000 0.00 0.00 0.00 4.12
4423 4493 5.024118 CCTGACCTATATACCCTACCCAAG 58.976 50.000 0.00 0.00 0.00 3.61
4424 4494 5.019657 TGACCTATATACCCTACCCAAGG 57.980 47.826 0.00 0.00 46.09 3.61
4425 4495 4.424646 TGACCTATATACCCTACCCAAGGT 59.575 45.833 0.00 0.00 44.90 3.50
4426 4496 5.102521 TGACCTATATACCCTACCCAAGGTT 60.103 44.000 0.00 0.00 44.90 3.50
4427 4497 6.106041 TGACCTATATACCCTACCCAAGGTTA 59.894 42.308 0.00 0.00 44.90 2.85
4428 4498 6.326161 ACCTATATACCCTACCCAAGGTTAC 58.674 44.000 0.00 0.00 44.90 2.50
4429 4499 6.106797 ACCTATATACCCTACCCAAGGTTACT 59.893 42.308 0.00 0.00 44.90 2.24
4430 4500 7.300492 ACCTATATACCCTACCCAAGGTTACTA 59.700 40.741 0.00 0.00 44.90 1.82
4431 4501 7.617329 CCTATATACCCTACCCAAGGTTACTAC 59.383 44.444 0.00 0.00 44.90 2.73
4432 4502 2.837947 ACCCTACCCAAGGTTACTACC 58.162 52.381 0.00 0.00 44.90 3.18
4433 4503 2.121948 CCCTACCCAAGGTTACTACCC 58.878 57.143 0.00 0.00 46.28 3.69
4434 4504 2.293385 CCCTACCCAAGGTTACTACCCT 60.293 54.545 0.00 0.00 46.28 4.34
4435 4505 3.051880 CCCTACCCAAGGTTACTACCCTA 60.052 52.174 0.00 0.00 46.28 3.53
4436 4506 4.221530 CCTACCCAAGGTTACTACCCTAG 58.778 52.174 0.00 0.00 46.28 3.02
4437 4507 4.078980 CCTACCCAAGGTTACTACCCTAGA 60.079 50.000 0.00 0.00 46.28 2.43
4438 4508 4.424761 ACCCAAGGTTACTACCCTAGAA 57.575 45.455 0.00 0.00 46.28 2.10
4439 4509 4.359996 ACCCAAGGTTACTACCCTAGAAG 58.640 47.826 0.00 0.00 46.28 2.85
4440 4510 3.134262 CCCAAGGTTACTACCCTAGAAGC 59.866 52.174 0.00 0.00 46.28 3.86
4441 4511 3.773119 CCAAGGTTACTACCCTAGAAGCA 59.227 47.826 0.00 0.00 46.28 3.91
4442 4512 4.224370 CCAAGGTTACTACCCTAGAAGCAA 59.776 45.833 0.00 0.00 46.28 3.91
4443 4513 5.280317 CCAAGGTTACTACCCTAGAAGCAAA 60.280 44.000 0.00 0.00 46.28 3.68
4444 4514 5.678955 AGGTTACTACCCTAGAAGCAAAG 57.321 43.478 0.00 0.00 46.28 2.77
4445 4515 4.470304 AGGTTACTACCCTAGAAGCAAAGG 59.530 45.833 0.00 0.00 46.28 3.11
4446 4516 4.468868 GGTTACTACCCTAGAAGCAAAGGA 59.531 45.833 0.00 0.00 38.60 3.36
4447 4517 5.395435 GGTTACTACCCTAGAAGCAAAGGAG 60.395 48.000 0.00 0.00 38.60 3.69
4448 4518 2.502130 ACTACCCTAGAAGCAAAGGAGC 59.498 50.000 0.00 0.00 34.58 4.70
4450 4520 1.557371 ACCCTAGAAGCAAAGGAGCTC 59.443 52.381 4.71 4.71 45.89 4.09
4451 4521 1.556911 CCCTAGAAGCAAAGGAGCTCA 59.443 52.381 17.19 0.00 45.89 4.26
4452 4522 2.026822 CCCTAGAAGCAAAGGAGCTCAA 60.027 50.000 17.19 0.00 45.89 3.02
4453 4523 3.269178 CCTAGAAGCAAAGGAGCTCAAG 58.731 50.000 17.19 2.79 45.89 3.02
4454 4524 3.055530 CCTAGAAGCAAAGGAGCTCAAGA 60.056 47.826 17.19 0.00 45.89 3.02
4455 4525 3.056588 AGAAGCAAAGGAGCTCAAGAG 57.943 47.619 17.19 3.55 45.89 2.85
4456 4526 2.636893 AGAAGCAAAGGAGCTCAAGAGA 59.363 45.455 17.19 0.00 45.89 3.10
4457 4527 2.470983 AGCAAAGGAGCTCAAGAGAC 57.529 50.000 17.19 0.00 42.18 3.36
4458 4528 1.696336 AGCAAAGGAGCTCAAGAGACA 59.304 47.619 17.19 0.00 42.18 3.41
4459 4529 2.105477 AGCAAAGGAGCTCAAGAGACAA 59.895 45.455 17.19 0.00 42.18 3.18
4460 4530 3.080319 GCAAAGGAGCTCAAGAGACAAT 58.920 45.455 17.19 0.00 0.00 2.71
4461 4531 4.019860 AGCAAAGGAGCTCAAGAGACAATA 60.020 41.667 17.19 0.00 42.18 1.90
4462 4532 4.332268 GCAAAGGAGCTCAAGAGACAATAG 59.668 45.833 17.19 0.00 0.00 1.73
4463 4533 4.751767 AAGGAGCTCAAGAGACAATAGG 57.248 45.455 17.19 0.00 0.00 2.57
4464 4534 3.037549 AGGAGCTCAAGAGACAATAGGG 58.962 50.000 17.19 0.00 0.00 3.53
4465 4535 3.034635 GGAGCTCAAGAGACAATAGGGA 58.965 50.000 17.19 0.00 0.00 4.20
4466 4536 3.069443 GGAGCTCAAGAGACAATAGGGAG 59.931 52.174 17.19 0.00 0.00 4.30
4467 4537 2.433970 AGCTCAAGAGACAATAGGGAGC 59.566 50.000 0.32 0.00 44.85 4.70
4468 4538 2.801342 GCTCAAGAGACAATAGGGAGCG 60.801 54.545 0.32 0.00 37.20 5.03
4469 4539 1.137086 TCAAGAGACAATAGGGAGCGC 59.863 52.381 0.00 0.00 0.00 5.92
4470 4540 0.466124 AAGAGACAATAGGGAGCGCC 59.534 55.000 2.29 0.00 0.00 6.53
4480 4550 3.502572 GGAGCGCCCAATGAAGAC 58.497 61.111 2.29 0.00 34.14 3.01
4481 4551 2.464459 GGAGCGCCCAATGAAGACG 61.464 63.158 2.29 0.00 34.14 4.18
4482 4552 1.741770 GAGCGCCCAATGAAGACGT 60.742 57.895 2.29 0.00 0.00 4.34
4483 4553 1.696832 GAGCGCCCAATGAAGACGTC 61.697 60.000 7.70 7.70 0.00 4.34
4484 4554 3.081133 CGCCCAATGAAGACGTCG 58.919 61.111 10.46 0.00 0.00 5.12
4485 4555 1.445410 CGCCCAATGAAGACGTCGA 60.445 57.895 10.46 0.00 0.00 4.20
4486 4556 1.413767 CGCCCAATGAAGACGTCGAG 61.414 60.000 10.46 0.00 0.00 4.04
4487 4557 0.389948 GCCCAATGAAGACGTCGAGT 60.390 55.000 10.46 0.00 0.00 4.18
4488 4558 1.350193 CCCAATGAAGACGTCGAGTG 58.650 55.000 10.46 7.73 0.00 3.51
4489 4559 0.716108 CCAATGAAGACGTCGAGTGC 59.284 55.000 10.46 0.00 0.00 4.40
4490 4560 1.418373 CAATGAAGACGTCGAGTGCA 58.582 50.000 10.46 5.67 0.00 4.57
4491 4561 1.792367 CAATGAAGACGTCGAGTGCAA 59.208 47.619 10.46 0.00 0.00 4.08
4492 4562 2.370281 ATGAAGACGTCGAGTGCAAT 57.630 45.000 10.46 0.00 0.00 3.56
4493 4563 1.698165 TGAAGACGTCGAGTGCAATC 58.302 50.000 10.46 3.54 0.00 2.67
4494 4564 0.992802 GAAGACGTCGAGTGCAATCC 59.007 55.000 10.46 0.00 0.00 3.01
4495 4565 0.317160 AAGACGTCGAGTGCAATCCA 59.683 50.000 10.46 0.00 0.00 3.41
4496 4566 0.388649 AGACGTCGAGTGCAATCCAC 60.389 55.000 10.46 5.07 45.01 4.02
4503 4573 4.693532 GTGCAATCCACTCGACCA 57.306 55.556 0.00 0.00 41.35 4.02
4504 4574 2.460330 GTGCAATCCACTCGACCAG 58.540 57.895 0.00 0.00 41.35 4.00
4505 4575 0.320771 GTGCAATCCACTCGACCAGT 60.321 55.000 0.00 0.00 41.35 4.00
4506 4576 0.037326 TGCAATCCACTCGACCAGTC 60.037 55.000 0.00 0.00 30.26 3.51
4507 4577 0.037326 GCAATCCACTCGACCAGTCA 60.037 55.000 0.00 0.00 30.26 3.41
4508 4578 1.406069 GCAATCCACTCGACCAGTCAT 60.406 52.381 0.00 0.00 30.26 3.06
4509 4579 2.159099 GCAATCCACTCGACCAGTCATA 60.159 50.000 0.00 0.00 30.26 2.15
4510 4580 3.493350 GCAATCCACTCGACCAGTCATAT 60.493 47.826 0.00 0.00 30.26 1.78
4511 4581 4.302455 CAATCCACTCGACCAGTCATATC 58.698 47.826 0.00 0.00 30.26 1.63
4512 4582 3.012934 TCCACTCGACCAGTCATATCA 57.987 47.619 0.00 0.00 30.26 2.15
4513 4583 2.688446 TCCACTCGACCAGTCATATCAC 59.312 50.000 0.00 0.00 30.26 3.06
4514 4584 2.690497 CCACTCGACCAGTCATATCACT 59.310 50.000 0.00 0.00 30.26 3.41
4515 4585 3.243234 CCACTCGACCAGTCATATCACTC 60.243 52.174 0.00 0.00 30.26 3.51
4516 4586 2.614520 ACTCGACCAGTCATATCACTCG 59.385 50.000 0.00 0.00 0.00 4.18
4517 4587 1.947456 TCGACCAGTCATATCACTCGG 59.053 52.381 0.00 0.00 0.00 4.63
4518 4588 1.001268 CGACCAGTCATATCACTCGGG 60.001 57.143 0.00 0.00 0.00 5.14
4519 4589 2.032620 GACCAGTCATATCACTCGGGT 58.967 52.381 0.00 0.00 0.00 5.28
4520 4590 3.220110 GACCAGTCATATCACTCGGGTA 58.780 50.000 0.00 0.00 0.00 3.69
4521 4591 2.957006 ACCAGTCATATCACTCGGGTAC 59.043 50.000 0.00 0.00 0.00 3.34
4535 4605 3.554498 GGTACCCCTCCTTCCCTAG 57.446 63.158 0.00 0.00 0.00 3.02
4536 4606 0.939698 GGTACCCCTCCTTCCCTAGA 59.060 60.000 0.00 0.00 0.00 2.43
4537 4607 1.412793 GGTACCCCTCCTTCCCTAGAC 60.413 61.905 0.00 0.00 0.00 2.59
4538 4608 0.939698 TACCCCTCCTTCCCTAGACC 59.060 60.000 0.00 0.00 0.00 3.85
4539 4609 1.160289 ACCCCTCCTTCCCTAGACCA 61.160 60.000 0.00 0.00 0.00 4.02
4540 4610 0.269173 CCCCTCCTTCCCTAGACCAT 59.731 60.000 0.00 0.00 0.00 3.55
4541 4611 1.345526 CCCCTCCTTCCCTAGACCATT 60.346 57.143 0.00 0.00 0.00 3.16
4542 4612 2.050918 CCCTCCTTCCCTAGACCATTC 58.949 57.143 0.00 0.00 0.00 2.67
4543 4613 1.689273 CCTCCTTCCCTAGACCATTCG 59.311 57.143 0.00 0.00 0.00 3.34
4544 4614 2.667470 CTCCTTCCCTAGACCATTCGA 58.333 52.381 0.00 0.00 0.00 3.71
4545 4615 2.362717 CTCCTTCCCTAGACCATTCGAC 59.637 54.545 0.00 0.00 0.00 4.20
4546 4616 1.413077 CCTTCCCTAGACCATTCGACC 59.587 57.143 0.00 0.00 0.00 4.79
4547 4617 2.108168 CTTCCCTAGACCATTCGACCA 58.892 52.381 0.00 0.00 0.00 4.02
4548 4618 2.471815 TCCCTAGACCATTCGACCAT 57.528 50.000 0.00 0.00 0.00 3.55
4549 4619 3.605726 TCCCTAGACCATTCGACCATA 57.394 47.619 0.00 0.00 0.00 2.74
4550 4620 3.228453 TCCCTAGACCATTCGACCATAC 58.772 50.000 0.00 0.00 0.00 2.39
4551 4621 2.963101 CCCTAGACCATTCGACCATACA 59.037 50.000 0.00 0.00 0.00 2.29
4552 4622 3.386726 CCCTAGACCATTCGACCATACAA 59.613 47.826 0.00 0.00 0.00 2.41
4553 4623 4.501571 CCCTAGACCATTCGACCATACAAG 60.502 50.000 0.00 0.00 0.00 3.16
4554 4624 4.341235 CCTAGACCATTCGACCATACAAGA 59.659 45.833 0.00 0.00 0.00 3.02
4555 4625 4.819105 AGACCATTCGACCATACAAGAA 57.181 40.909 0.00 0.00 0.00 2.52
4556 4626 5.160607 AGACCATTCGACCATACAAGAAA 57.839 39.130 0.00 0.00 0.00 2.52
4557 4627 4.935808 AGACCATTCGACCATACAAGAAAC 59.064 41.667 0.00 0.00 0.00 2.78
4558 4628 4.007659 ACCATTCGACCATACAAGAAACC 58.992 43.478 0.00 0.00 0.00 3.27
4559 4629 4.006989 CCATTCGACCATACAAGAAACCA 58.993 43.478 0.00 0.00 0.00 3.67
4560 4630 4.142687 CCATTCGACCATACAAGAAACCAC 60.143 45.833 0.00 0.00 0.00 4.16
4561 4631 4.345859 TTCGACCATACAAGAAACCACT 57.654 40.909 0.00 0.00 0.00 4.00
4562 4632 3.921677 TCGACCATACAAGAAACCACTC 58.078 45.455 0.00 0.00 0.00 3.51
4563 4633 2.666508 CGACCATACAAGAAACCACTCG 59.333 50.000 0.00 0.00 0.00 4.18
4564 4634 3.613193 CGACCATACAAGAAACCACTCGA 60.613 47.826 0.00 0.00 0.00 4.04
4565 4635 3.660865 ACCATACAAGAAACCACTCGAC 58.339 45.455 0.00 0.00 0.00 4.20
4566 4636 3.000727 CCATACAAGAAACCACTCGACC 58.999 50.000 0.00 0.00 0.00 4.79
4567 4637 3.556213 CCATACAAGAAACCACTCGACCA 60.556 47.826 0.00 0.00 0.00 4.02
4568 4638 2.702592 ACAAGAAACCACTCGACCAA 57.297 45.000 0.00 0.00 0.00 3.67
4569 4639 3.208747 ACAAGAAACCACTCGACCAAT 57.791 42.857 0.00 0.00 0.00 3.16
4570 4640 2.878406 ACAAGAAACCACTCGACCAATG 59.122 45.455 0.00 0.00 0.00 2.82
4571 4641 3.138304 CAAGAAACCACTCGACCAATGA 58.862 45.455 0.00 0.00 0.00 2.57
4572 4642 3.485463 AGAAACCACTCGACCAATGAA 57.515 42.857 0.00 0.00 0.00 2.57
4573 4643 3.403038 AGAAACCACTCGACCAATGAAG 58.597 45.455 0.00 0.00 0.00 3.02
4574 4644 3.071023 AGAAACCACTCGACCAATGAAGA 59.929 43.478 0.00 0.00 0.00 2.87
4575 4645 2.457366 ACCACTCGACCAATGAAGAC 57.543 50.000 0.00 0.00 0.00 3.01
4576 4646 1.002087 ACCACTCGACCAATGAAGACC 59.998 52.381 0.00 0.00 0.00 3.85
4577 4647 1.001974 CCACTCGACCAATGAAGACCA 59.998 52.381 0.00 0.00 0.00 4.02
4578 4648 2.341257 CACTCGACCAATGAAGACCAG 58.659 52.381 0.00 0.00 0.00 4.00
4579 4649 1.276421 ACTCGACCAATGAAGACCAGG 59.724 52.381 0.00 0.00 0.00 4.45
4580 4650 1.550524 CTCGACCAATGAAGACCAGGA 59.449 52.381 0.00 0.00 0.00 3.86
4581 4651 1.550524 TCGACCAATGAAGACCAGGAG 59.449 52.381 0.00 0.00 0.00 3.69
4582 4652 1.276421 CGACCAATGAAGACCAGGAGT 59.724 52.381 0.00 0.00 0.00 3.85
4583 4653 2.675317 CGACCAATGAAGACCAGGAGTC 60.675 54.545 0.00 0.00 46.71 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
172 174 9.719355 AATATTTGGGTTTAAGTGTTTTGGATC 57.281 29.630 0.00 0.00 0.00 3.36
182 184 9.143155 ACTCTCAAACAATATTTGGGTTTAAGT 57.857 29.630 2.97 4.90 33.72 2.24
232 237 7.159372 TGACAACTTACTTGAAGGATCTTACC 58.841 38.462 0.00 0.00 39.74 2.85
271 277 7.951565 CGCACTTTTAGAAGCAATTTTTATTGG 59.048 33.333 0.00 0.00 36.29 3.16
296 306 6.645003 TCAATCCCTTACACGAAATGATATCG 59.355 38.462 0.00 0.00 45.47 2.92
299 309 6.761242 CACTCAATCCCTTACACGAAATGATA 59.239 38.462 0.00 0.00 0.00 2.15
307 317 3.399330 ACAACACTCAATCCCTTACACG 58.601 45.455 0.00 0.00 0.00 4.49
334 347 6.148948 CGCTTTTATTCTTCACCATCACAAA 58.851 36.000 0.00 0.00 0.00 2.83
344 357 4.152402 GCAGTCTGACGCTTTTATTCTTCA 59.848 41.667 3.32 0.00 0.00 3.02
359 372 4.640201 GGCAACCTTTATTATGCAGTCTGA 59.360 41.667 3.32 0.00 40.51 3.27
416 429 2.238646 TGTATGCTCAACCCCTTAGTGG 59.761 50.000 0.00 0.00 0.00 4.00
453 466 2.327325 TAGAGGGAAGCAGAGGTTGT 57.673 50.000 0.00 0.00 0.00 3.32
473 486 8.113462 ACATAAAAGTAAAAGATAGGCCCTTCA 58.887 33.333 0.00 0.00 0.00 3.02
539 555 7.441836 GCTTCCCAAAGGAGAAAATAAAAAGA 58.558 34.615 0.00 0.00 45.19 2.52
560 576 0.037326 TCCTCACCACATGACGCTTC 60.037 55.000 0.00 0.00 32.37 3.86
565 581 4.213564 AGATCTTTCCTCACCACATGAC 57.786 45.455 0.00 0.00 32.37 3.06
588 609 7.884877 ACCCATATTCAACTGGATATATGTGTG 59.115 37.037 0.00 0.00 34.24 3.82
589 610 7.988937 ACCCATATTCAACTGGATATATGTGT 58.011 34.615 0.00 0.00 34.24 3.72
665 686 6.326843 AGAAAGATAGGGGCTTATAGTTTCGT 59.673 38.462 0.00 0.00 29.61 3.85
719 740 1.614385 CTAACACTCACCGCGTACAG 58.386 55.000 4.92 0.00 0.00 2.74
790 814 2.462723 TCAGGATGGGTCACGTATCAA 58.537 47.619 0.00 0.00 36.16 2.57
804 828 9.525826 AACTACAATTCTTCATCTTTTCAGGAT 57.474 29.630 0.00 0.00 0.00 3.24
819 843 7.228706 CCCAGTCAACTTTGTAACTACAATTCT 59.771 37.037 3.25 0.00 44.72 2.40
831 855 5.048846 ACTATGTTCCCAGTCAACTTTGT 57.951 39.130 0.00 0.00 0.00 2.83
984 1008 3.393800 GGACATAGCAGCATCGTGTAAT 58.606 45.455 0.00 0.00 0.00 1.89
990 1014 2.354109 ATACGGACATAGCAGCATCG 57.646 50.000 0.00 0.00 0.00 3.84
1063 1090 2.270352 TGTCCTCAAGCGAAAACCAT 57.730 45.000 0.00 0.00 0.00 3.55
1118 1145 7.611213 AACAGTAGGTAAACATGATGCTAAC 57.389 36.000 0.00 0.00 0.00 2.34
1121 1148 8.807948 AAATAACAGTAGGTAAACATGATGCT 57.192 30.769 0.00 0.00 0.00 3.79
1166 1193 9.925268 GCATTAGAATTAATCCAAAAAGCATTG 57.075 29.630 0.00 0.00 0.00 2.82
1271 1298 3.041211 TGTGCAGAATAGGTAGCCTGAT 58.959 45.455 0.00 0.00 34.61 2.90
1542 1576 1.952621 AAGTGCTCCTGCCTAGGTTA 58.047 50.000 11.31 0.00 44.88 2.85
1571 1605 1.680735 CTCTAGCAGAATCGCTCCACT 59.319 52.381 3.16 0.00 42.62 4.00
1650 1685 1.457831 GGAGATAGCCGTCCCCAGT 60.458 63.158 0.00 0.00 0.00 4.00
1653 1688 0.832135 TGATGGAGATAGCCGTCCCC 60.832 60.000 0.00 0.00 42.19 4.81
1658 1695 3.674528 AGATGTTGATGGAGATAGCCG 57.325 47.619 0.00 0.00 0.00 5.52
1692 1729 6.216456 AGAGATGAACTAGGGTTTGAAAGGAT 59.784 38.462 0.00 0.00 35.58 3.24
1697 1734 6.043243 ACTCAAGAGATGAACTAGGGTTTGAA 59.957 38.462 3.73 0.00 37.67 2.69
1720 1757 4.969484 AGTTCCGGTACAAAGATTGAACT 58.031 39.130 14.14 2.53 36.91 3.01
1858 1896 9.078990 ACAAATGATAATCATGCTCAAGATCAT 57.921 29.630 0.00 0.00 37.15 2.45
1923 1961 5.762045 AGTTCACATGATTACTTGCAACAC 58.238 37.500 0.00 0.00 0.00 3.32
1961 1999 9.806203 AATCACAACATACATACCATCAAAATG 57.194 29.630 0.00 0.00 0.00 2.32
1971 2009 7.226720 CCACTAAGGGAATCACAACATACATAC 59.773 40.741 0.00 0.00 0.00 2.39
2050 2088 8.264347 TCATCTAATAACTACTCCACAATGCAA 58.736 33.333 0.00 0.00 0.00 4.08
2140 2182 6.608808 AGCCATAGCATTAAACTTTTGGATCT 59.391 34.615 11.58 2.50 43.56 2.75
2183 2225 2.351726 GCATCCGCAACTACGAGAAAAT 59.648 45.455 0.00 0.00 38.36 1.82
2312 2354 5.189736 TCATCTAGCCACTTTCACTATGGTT 59.810 40.000 0.00 0.00 35.79 3.67
2314 2356 5.053145 GTCATCTAGCCACTTTCACTATGG 58.947 45.833 0.00 0.00 36.51 2.74
2318 2360 4.833478 ATGTCATCTAGCCACTTTCACT 57.167 40.909 0.00 0.00 0.00 3.41
2328 2370 2.604046 ACACGGGAATGTCATCTAGC 57.396 50.000 0.00 0.00 0.00 3.42
2337 2379 1.553248 TCTTGAGGGTACACGGGAATG 59.447 52.381 0.00 0.00 0.00 2.67
2358 2400 6.007076 TGGTTTGTTATGATAAGCAAGGTGA 58.993 36.000 0.00 0.00 0.00 4.02
2376 2418 1.693606 AGGACAGGCCAAAATGGTTTG 59.306 47.619 5.01 0.00 43.26 2.93
2378 2420 2.101640 AAGGACAGGCCAAAATGGTT 57.898 45.000 5.01 0.00 40.46 3.67
2496 2539 6.868339 GGTAATGTCTGCAAGTGCTAAAATTT 59.132 34.615 4.69 0.00 42.66 1.82
2650 2693 4.802918 GCACAGTGGCTCCTCTAGTAAAAA 60.803 45.833 1.84 0.00 0.00 1.94
2658 2703 2.919856 ACGCACAGTGGCTCCTCT 60.920 61.111 1.84 0.00 0.00 3.69
2671 2716 2.202810 TGCTGTCGTCAACACGCA 60.203 55.556 0.00 0.00 46.28 5.24
2675 2720 1.134818 AGTGTTCTGCTGTCGTCAACA 60.135 47.619 0.00 0.00 36.18 3.33
2683 2728 1.774856 AGGGGTAAAGTGTTCTGCTGT 59.225 47.619 0.00 0.00 0.00 4.40
2745 2790 5.448632 GGTGCTAATTTTCCGTAATCACCAG 60.449 44.000 0.00 0.00 40.65 4.00
2767 2812 0.610174 TTCTTGCAGCATCTCTCGGT 59.390 50.000 0.00 0.00 0.00 4.69
2774 2819 1.334779 GCCGATGATTCTTGCAGCATC 60.335 52.381 0.00 0.00 35.10 3.91
2789 2834 2.774439 GTGAAACAACACTTGCCGAT 57.226 45.000 0.00 0.00 37.73 4.18
2807 2852 1.201429 AAGACCGATGCCTTCCCAGT 61.201 55.000 0.00 0.00 0.00 4.00
2825 2870 3.195610 CACACCTAGTAGAGATGCACCAA 59.804 47.826 0.00 0.00 0.00 3.67
2905 2951 9.961264 TGACCTACATACCAAATTTATGTACAA 57.039 29.630 0.00 0.00 40.09 2.41
2920 2966 8.421784 TCTTGACCATTAATCTGACCTACATAC 58.578 37.037 0.00 0.00 0.00 2.39
2936 2982 5.324409 TCAATTAGGCTTGTCTTGACCATT 58.676 37.500 0.00 0.00 0.00 3.16
2948 2994 5.044550 ACTCTCCCTCATTTCAATTAGGCTT 60.045 40.000 0.00 0.00 30.09 4.35
2968 3014 5.836024 TGTTAAACCCAGATTGGTACTCT 57.164 39.130 0.00 0.00 37.76 3.24
3002 3048 9.461312 TCTGACATTTAACAATGGTTAGCTAAT 57.539 29.630 9.88 0.00 43.82 1.73
3041 3087 1.064003 TCCCACTGCTTAAGCTGGAA 58.936 50.000 28.56 12.95 43.15 3.53
3064 3110 9.836076 GGACAATTATTTGGTTTACAGTACTTC 57.164 33.333 0.00 0.00 37.15 3.01
3086 3132 2.104792 GCATCTTGTAGGGCATAGGACA 59.895 50.000 0.00 0.00 0.00 4.02
3087 3133 2.104792 TGCATCTTGTAGGGCATAGGAC 59.895 50.000 0.00 0.00 0.00 3.85
3119 3165 4.122776 GTGATGACTTGAACTGTGTCACT 58.877 43.478 4.27 0.00 42.43 3.41
3140 3186 5.700402 ACTTTACTATTCTCATGGCCTGT 57.300 39.130 3.32 0.00 0.00 4.00
3332 3379 2.158971 TCTTGCTAGGAACATATGCGCA 60.159 45.455 14.96 14.96 0.00 6.09
3347 3394 5.770162 ACCAAAGTAAAACTATGCTCTTGCT 59.230 36.000 0.00 0.00 40.48 3.91
3363 3410 9.887629 TGAAATACCGTCAATATAACCAAAGTA 57.112 29.630 0.00 0.00 0.00 2.24
3365 3412 9.104965 TCTGAAATACCGTCAATATAACCAAAG 57.895 33.333 0.00 0.00 0.00 2.77
3375 3422 8.840321 CAAAGGAATATCTGAAATACCGTCAAT 58.160 33.333 0.00 0.00 0.00 2.57
3393 3448 4.711846 GGCCTTCAATCTAACCAAAGGAAT 59.288 41.667 0.00 0.00 39.05 3.01
3404 3459 4.446311 GCTAAGAATGGGGCCTTCAATCTA 60.446 45.833 14.49 6.01 0.00 1.98
3465 3520 2.843545 GGTTCCCAACCCTGCTCA 59.156 61.111 0.00 0.00 46.12 4.26
3476 3531 1.210722 GTCCTCAAGGAGATGGTTCCC 59.789 57.143 0.00 0.00 46.49 3.97
3479 3534 0.905357 CCGTCCTCAAGGAGATGGTT 59.095 55.000 0.00 0.00 46.49 3.67
3490 3545 2.430382 GAACCTTCGTGCCGTCCTCA 62.430 60.000 0.00 0.00 0.00 3.86
3525 3580 2.258755 CATTGCACATCACTACGTCGA 58.741 47.619 0.00 0.00 0.00 4.20
3528 3583 4.450082 TCTACATTGCACATCACTACGT 57.550 40.909 0.00 0.00 0.00 3.57
3538 3593 6.017605 CCTTCACTTGGATATCTACATTGCAC 60.018 42.308 2.05 0.00 0.00 4.57
3539 3594 6.057533 CCTTCACTTGGATATCTACATTGCA 58.942 40.000 2.05 0.00 0.00 4.08
3540 3595 6.017605 CACCTTCACTTGGATATCTACATTGC 60.018 42.308 2.05 0.00 0.00 3.56
3547 3602 5.762179 TGAACACCTTCACTTGGATATCT 57.238 39.130 2.05 0.00 31.00 1.98
3552 3607 4.163441 TCATTGAACACCTTCACTTGGA 57.837 40.909 0.00 0.00 36.06 3.53
3556 3611 5.684704 TCTCTTTCATTGAACACCTTCACT 58.315 37.500 0.00 0.00 36.06 3.41
3583 3638 7.698550 GCATTTCGATACTACGATGATGACTAT 59.301 37.037 0.64 0.00 41.82 2.12
3584 3639 7.021790 GCATTTCGATACTACGATGATGACTA 58.978 38.462 0.64 0.00 41.82 2.59
3595 3650 4.271049 ACATGTGCAGCATTTCGATACTAC 59.729 41.667 0.00 0.00 35.19 2.73
3618 3673 2.289631 CCGCTCCATACTATGATGGCAA 60.290 50.000 0.00 0.00 45.31 4.52
3621 3676 1.552337 AGCCGCTCCATACTATGATGG 59.448 52.381 0.00 0.00 46.82 3.51
3628 3683 0.465824 AGTCGTAGCCGCTCCATACT 60.466 55.000 0.00 0.00 0.00 2.12
3648 3703 5.903010 TGACATATACACCACCTCCACTTAT 59.097 40.000 0.00 0.00 0.00 1.73
3669 3724 5.907207 TGCCTACAGAATAGATCACTTGAC 58.093 41.667 0.00 0.00 0.00 3.18
3727 3784 4.319911 GGCACAAACTTATACAACAAGCGA 60.320 41.667 0.00 0.00 0.00 4.93
3746 3804 3.608316 TCCCTGCAAATTTATTGGCAC 57.392 42.857 0.37 0.00 41.55 5.01
3751 3809 5.356426 GCGGTTTATCCCTGCAAATTTATT 58.644 37.500 0.00 0.00 0.00 1.40
3776 3836 0.698818 ATCTGGAACAAGTCACCCCC 59.301 55.000 0.00 0.00 38.70 5.40
3778 3838 1.351017 TCCATCTGGAACAAGTCACCC 59.649 52.381 0.00 0.00 42.18 4.61
3779 3839 2.859165 TCCATCTGGAACAAGTCACC 57.141 50.000 0.00 0.00 42.18 4.02
3793 3853 8.636213 ACAATTGAATACTCCAATTCATCCATC 58.364 33.333 13.59 0.00 43.50 3.51
3798 3858 9.246670 TCTTCACAATTGAATACTCCAATTCAT 57.753 29.630 13.59 0.00 43.50 2.57
3800 3860 9.565213 CTTCTTCACAATTGAATACTCCAATTC 57.435 33.333 13.59 0.00 41.05 2.17
3801 3861 8.031277 GCTTCTTCACAATTGAATACTCCAATT 58.969 33.333 13.59 0.00 41.05 2.32
3813 3873 5.916883 CCAGTTTACAGCTTCTTCACAATTG 59.083 40.000 3.24 3.24 0.00 2.32
3822 3882 3.136626 ACCAAGTCCAGTTTACAGCTTCT 59.863 43.478 0.00 0.00 0.00 2.85
3866 3929 2.163412 GCCATGTTTAATGCTCGTGGAA 59.837 45.455 6.80 0.00 39.72 3.53
3867 3930 1.742831 GCCATGTTTAATGCTCGTGGA 59.257 47.619 6.80 0.00 39.72 4.02
3872 3935 4.808558 TCACAAAGCCATGTTTAATGCTC 58.191 39.130 0.00 0.00 32.62 4.26
3893 3956 1.945387 ACATCTGATGGTGCGACATC 58.055 50.000 20.83 12.12 45.79 3.06
3896 3959 3.165058 TCTTACATCTGATGGTGCGAC 57.835 47.619 20.83 0.00 33.60 5.19
3899 3962 5.121811 ACTCAATCTTACATCTGATGGTGC 58.878 41.667 20.83 0.00 33.60 5.01
3930 3993 8.237267 CCCAGTCAGTAAACAACATTAATCTTC 58.763 37.037 0.00 0.00 0.00 2.87
3956 4019 4.973168 TGAAAGCATATACTGTCATCCCC 58.027 43.478 0.00 0.00 28.60 4.81
4000 4069 5.875359 GGAGTCTCAAACGAGAAATGGTTAT 59.125 40.000 1.47 0.00 41.19 1.89
4012 4081 8.706936 CAATATGATAAGATGGAGTCTCAAACG 58.293 37.037 1.47 0.00 35.67 3.60
4113 4183 3.399644 TCCACATTTTCCAAGGTAGGGAA 59.600 43.478 0.00 0.00 42.49 3.97
4114 4184 2.990284 TCCACATTTTCCAAGGTAGGGA 59.010 45.455 0.00 0.00 0.00 4.20
4115 4185 3.449746 TCCACATTTTCCAAGGTAGGG 57.550 47.619 0.00 0.00 0.00 3.53
4116 4186 5.799827 TTTTCCACATTTTCCAAGGTAGG 57.200 39.130 0.00 0.00 0.00 3.18
4117 4187 8.364142 TGTATTTTTCCACATTTTCCAAGGTAG 58.636 33.333 0.00 0.00 0.00 3.18
4118 4188 8.251383 TGTATTTTTCCACATTTTCCAAGGTA 57.749 30.769 0.00 0.00 0.00 3.08
4119 4189 7.130681 TGTATTTTTCCACATTTTCCAAGGT 57.869 32.000 0.00 0.00 0.00 3.50
4120 4190 8.620116 AATGTATTTTTCCACATTTTCCAAGG 57.380 30.769 0.00 0.00 29.59 3.61
4154 4224 9.288576 CCTCATGAGATTTGCTATAAAACCATA 57.711 33.333 24.62 0.00 0.00 2.74
4155 4225 8.000709 TCCTCATGAGATTTGCTATAAAACCAT 58.999 33.333 24.62 0.00 0.00 3.55
4156 4226 7.345691 TCCTCATGAGATTTGCTATAAAACCA 58.654 34.615 24.62 0.00 0.00 3.67
4157 4227 7.521261 GCTCCTCATGAGATTTGCTATAAAACC 60.521 40.741 24.62 0.00 44.42 3.27
4158 4228 7.358830 GCTCCTCATGAGATTTGCTATAAAAC 58.641 38.462 24.62 0.00 44.42 2.43
4159 4229 6.203530 CGCTCCTCATGAGATTTGCTATAAAA 59.796 38.462 24.62 0.00 44.42 1.52
4160 4230 5.698089 CGCTCCTCATGAGATTTGCTATAAA 59.302 40.000 24.62 0.00 44.42 1.40
4161 4231 5.233225 CGCTCCTCATGAGATTTGCTATAA 58.767 41.667 24.62 0.00 44.42 0.98
4162 4232 4.322273 CCGCTCCTCATGAGATTTGCTATA 60.322 45.833 24.62 0.00 44.42 1.31
4163 4233 3.556633 CCGCTCCTCATGAGATTTGCTAT 60.557 47.826 24.62 0.00 44.42 2.97
4164 4234 2.224137 CCGCTCCTCATGAGATTTGCTA 60.224 50.000 24.62 0.00 44.42 3.49
4165 4235 1.474677 CCGCTCCTCATGAGATTTGCT 60.475 52.381 24.62 0.00 44.42 3.91
4166 4236 0.942962 CCGCTCCTCATGAGATTTGC 59.057 55.000 24.62 18.51 44.42 3.68
4167 4237 0.942962 GCCGCTCCTCATGAGATTTG 59.057 55.000 24.62 10.63 44.42 2.32
4168 4238 0.835941 AGCCGCTCCTCATGAGATTT 59.164 50.000 24.62 0.00 44.42 2.17
4169 4239 0.392336 GAGCCGCTCCTCATGAGATT 59.608 55.000 24.62 1.17 44.42 2.40
4170 4240 0.758310 TGAGCCGCTCCTCATGAGAT 60.758 55.000 24.62 0.00 44.42 2.75
4171 4241 1.380380 TGAGCCGCTCCTCATGAGA 60.380 57.895 24.62 9.26 44.42 3.27
4172 4242 3.214253 TGAGCCGCTCCTCATGAG 58.786 61.111 17.81 16.24 44.47 2.90
4176 4246 1.709578 AAGATATGAGCCGCTCCTCA 58.290 50.000 17.81 0.26 45.16 3.86
4177 4247 2.829741 AAAGATATGAGCCGCTCCTC 57.170 50.000 17.81 11.40 0.00 3.71
4178 4248 3.471680 GAAAAAGATATGAGCCGCTCCT 58.528 45.455 17.81 10.57 0.00 3.69
4179 4249 2.550180 GGAAAAAGATATGAGCCGCTCC 59.450 50.000 17.81 2.14 0.00 4.70
4180 4250 2.221981 CGGAAAAAGATATGAGCCGCTC 59.778 50.000 13.81 13.81 0.00 5.03
4181 4251 2.213499 CGGAAAAAGATATGAGCCGCT 58.787 47.619 0.00 0.00 0.00 5.52
4182 4252 1.940613 ACGGAAAAAGATATGAGCCGC 59.059 47.619 0.00 0.00 40.81 6.53
4183 4253 3.194861 TGACGGAAAAAGATATGAGCCG 58.805 45.455 0.00 0.00 42.64 5.52
4184 4254 4.636206 ACTTGACGGAAAAAGATATGAGCC 59.364 41.667 0.00 0.00 0.00 4.70
4185 4255 5.351465 TGACTTGACGGAAAAAGATATGAGC 59.649 40.000 0.00 0.00 0.00 4.26
4186 4256 6.968131 TGACTTGACGGAAAAAGATATGAG 57.032 37.500 0.00 0.00 0.00 2.90
4187 4257 8.038351 TGTATGACTTGACGGAAAAAGATATGA 58.962 33.333 0.00 0.00 0.00 2.15
4188 4258 8.196802 TGTATGACTTGACGGAAAAAGATATG 57.803 34.615 0.00 0.00 0.00 1.78
4189 4259 8.786826 TTGTATGACTTGACGGAAAAAGATAT 57.213 30.769 0.00 0.00 0.00 1.63
4190 4260 8.786826 ATTGTATGACTTGACGGAAAAAGATA 57.213 30.769 0.00 0.00 0.00 1.98
4191 4261 7.687941 ATTGTATGACTTGACGGAAAAAGAT 57.312 32.000 0.00 0.00 0.00 2.40
4192 4262 7.504924 AATTGTATGACTTGACGGAAAAAGA 57.495 32.000 0.00 0.00 0.00 2.52
4193 4263 8.574196 AAAATTGTATGACTTGACGGAAAAAG 57.426 30.769 0.00 0.00 0.00 2.27
4194 4264 8.934507 AAAAATTGTATGACTTGACGGAAAAA 57.065 26.923 0.00 0.00 0.00 1.94
4216 4286 7.243604 TGTACCCTTCTATCCTAACGAAAAA 57.756 36.000 0.00 0.00 0.00 1.94
4217 4287 6.855763 TGTACCCTTCTATCCTAACGAAAA 57.144 37.500 0.00 0.00 0.00 2.29
4218 4288 6.381994 ACATGTACCCTTCTATCCTAACGAAA 59.618 38.462 0.00 0.00 0.00 3.46
4219 4289 5.895534 ACATGTACCCTTCTATCCTAACGAA 59.104 40.000 0.00 0.00 0.00 3.85
4220 4290 5.452255 ACATGTACCCTTCTATCCTAACGA 58.548 41.667 0.00 0.00 0.00 3.85
4221 4291 5.786264 ACATGTACCCTTCTATCCTAACG 57.214 43.478 0.00 0.00 0.00 3.18
4222 4292 8.095169 CCAATACATGTACCCTTCTATCCTAAC 58.905 40.741 7.96 0.00 0.00 2.34
4223 4293 7.792736 ACCAATACATGTACCCTTCTATCCTAA 59.207 37.037 7.96 0.00 0.00 2.69
4224 4294 7.310634 ACCAATACATGTACCCTTCTATCCTA 58.689 38.462 7.96 0.00 0.00 2.94
4225 4295 6.151049 ACCAATACATGTACCCTTCTATCCT 58.849 40.000 7.96 0.00 0.00 3.24
4226 4296 6.435292 ACCAATACATGTACCCTTCTATCC 57.565 41.667 7.96 0.00 0.00 2.59
4227 4297 6.204882 GCAACCAATACATGTACCCTTCTATC 59.795 42.308 7.96 0.00 0.00 2.08
4228 4298 6.062095 GCAACCAATACATGTACCCTTCTAT 58.938 40.000 7.96 0.00 0.00 1.98
4229 4299 5.190925 AGCAACCAATACATGTACCCTTCTA 59.809 40.000 7.96 0.00 0.00 2.10
4230 4300 4.018415 AGCAACCAATACATGTACCCTTCT 60.018 41.667 7.96 0.00 0.00 2.85
4231 4301 4.270008 AGCAACCAATACATGTACCCTTC 58.730 43.478 7.96 0.00 0.00 3.46
4232 4302 4.316025 AGCAACCAATACATGTACCCTT 57.684 40.909 7.96 0.00 0.00 3.95
4233 4303 4.016444 CAAGCAACCAATACATGTACCCT 58.984 43.478 7.96 0.00 0.00 4.34
4234 4304 3.428862 GCAAGCAACCAATACATGTACCC 60.429 47.826 7.96 0.00 0.00 3.69
4235 4305 3.443681 AGCAAGCAACCAATACATGTACC 59.556 43.478 7.96 0.00 0.00 3.34
4236 4306 4.701956 AGCAAGCAACCAATACATGTAC 57.298 40.909 7.96 0.00 0.00 2.90
4237 4307 4.764308 TGAAGCAAGCAACCAATACATGTA 59.236 37.500 8.27 8.27 0.00 2.29
4238 4308 3.573538 TGAAGCAAGCAACCAATACATGT 59.426 39.130 2.69 2.69 0.00 3.21
4239 4309 3.922240 GTGAAGCAAGCAACCAATACATG 59.078 43.478 0.00 0.00 0.00 3.21
4240 4310 3.366273 CGTGAAGCAAGCAACCAATACAT 60.366 43.478 0.00 0.00 0.00 2.29
4241 4311 2.031245 CGTGAAGCAAGCAACCAATACA 60.031 45.455 0.00 0.00 0.00 2.29
4242 4312 2.225491 TCGTGAAGCAAGCAACCAATAC 59.775 45.455 0.00 0.00 0.00 1.89
4243 4313 2.483877 CTCGTGAAGCAAGCAACCAATA 59.516 45.455 0.00 0.00 0.00 1.90
4244 4314 1.267806 CTCGTGAAGCAAGCAACCAAT 59.732 47.619 0.00 0.00 0.00 3.16
4245 4315 0.662619 CTCGTGAAGCAAGCAACCAA 59.337 50.000 0.00 0.00 0.00 3.67
4246 4316 0.463654 ACTCGTGAAGCAAGCAACCA 60.464 50.000 0.00 0.00 0.00 3.67
4247 4317 0.663153 AACTCGTGAAGCAAGCAACC 59.337 50.000 0.00 0.00 0.00 3.77
4248 4318 3.602390 TTAACTCGTGAAGCAAGCAAC 57.398 42.857 0.00 0.00 0.00 4.17
4249 4319 5.933187 TTATTAACTCGTGAAGCAAGCAA 57.067 34.783 0.00 0.00 0.00 3.91
4250 4320 5.163764 CCATTATTAACTCGTGAAGCAAGCA 60.164 40.000 0.00 0.00 0.00 3.91
4251 4321 5.064707 TCCATTATTAACTCGTGAAGCAAGC 59.935 40.000 0.00 0.00 0.00 4.01
4252 4322 6.092122 TGTCCATTATTAACTCGTGAAGCAAG 59.908 38.462 0.00 0.00 0.00 4.01
4253 4323 5.935206 TGTCCATTATTAACTCGTGAAGCAA 59.065 36.000 0.00 0.00 0.00 3.91
4254 4324 5.350365 GTGTCCATTATTAACTCGTGAAGCA 59.650 40.000 0.00 0.00 0.00 3.91
4255 4325 5.500290 CGTGTCCATTATTAACTCGTGAAGC 60.500 44.000 0.00 0.00 0.00 3.86
4256 4326 5.005394 CCGTGTCCATTATTAACTCGTGAAG 59.995 44.000 0.00 0.00 0.00 3.02
4257 4327 4.865925 CCGTGTCCATTATTAACTCGTGAA 59.134 41.667 0.00 0.00 0.00 3.18
4258 4328 4.082081 ACCGTGTCCATTATTAACTCGTGA 60.082 41.667 0.00 0.00 0.00 4.35
4259 4329 4.032445 CACCGTGTCCATTATTAACTCGTG 59.968 45.833 0.00 0.00 0.00 4.35
4260 4330 4.178540 CACCGTGTCCATTATTAACTCGT 58.821 43.478 0.00 0.00 0.00 4.18
4261 4331 3.000925 GCACCGTGTCCATTATTAACTCG 59.999 47.826 0.00 0.00 0.00 4.18
4262 4332 3.311596 GGCACCGTGTCCATTATTAACTC 59.688 47.826 0.00 0.00 0.00 3.01
4263 4333 3.275999 GGCACCGTGTCCATTATTAACT 58.724 45.455 0.00 0.00 0.00 2.24
4264 4334 3.011119 TGGCACCGTGTCCATTATTAAC 58.989 45.455 9.74 0.00 0.00 2.01
4265 4335 3.351794 TGGCACCGTGTCCATTATTAA 57.648 42.857 9.74 0.00 0.00 1.40
4266 4336 3.011119 GTTGGCACCGTGTCCATTATTA 58.989 45.455 13.33 0.00 31.54 0.98
4267 4337 1.816224 GTTGGCACCGTGTCCATTATT 59.184 47.619 13.33 0.00 31.54 1.40
4268 4338 1.271652 TGTTGGCACCGTGTCCATTAT 60.272 47.619 13.33 0.00 31.54 1.28
4269 4339 0.108774 TGTTGGCACCGTGTCCATTA 59.891 50.000 13.33 5.51 31.54 1.90
4270 4340 1.152860 TGTTGGCACCGTGTCCATT 60.153 52.632 13.33 0.00 31.54 3.16
4271 4341 1.600636 CTGTTGGCACCGTGTCCAT 60.601 57.895 13.33 0.00 31.54 3.41
4272 4342 2.203139 CTGTTGGCACCGTGTCCA 60.203 61.111 9.74 9.74 0.00 4.02
4273 4343 3.660111 GCTGTTGGCACCGTGTCC 61.660 66.667 0.00 3.00 41.35 4.02
4282 4352 3.628942 TCAATATCTCATGTGCTGTTGGC 59.371 43.478 7.82 0.00 42.22 4.52
4283 4353 5.823209 TTCAATATCTCATGTGCTGTTGG 57.177 39.130 7.82 0.00 0.00 3.77
4284 4354 7.253983 GCAAATTCAATATCTCATGTGCTGTTG 60.254 37.037 0.00 0.00 0.00 3.33
4285 4355 6.755141 GCAAATTCAATATCTCATGTGCTGTT 59.245 34.615 0.00 0.00 0.00 3.16
4286 4356 6.270815 GCAAATTCAATATCTCATGTGCTGT 58.729 36.000 0.00 0.00 0.00 4.40
4287 4357 5.690409 GGCAAATTCAATATCTCATGTGCTG 59.310 40.000 0.00 0.00 0.00 4.41
4288 4358 5.597182 AGGCAAATTCAATATCTCATGTGCT 59.403 36.000 0.00 0.00 0.00 4.40
4289 4359 5.839621 AGGCAAATTCAATATCTCATGTGC 58.160 37.500 0.00 0.00 0.00 4.57
4290 4360 7.713750 AGAAGGCAAATTCAATATCTCATGTG 58.286 34.615 0.00 0.00 0.00 3.21
4291 4361 7.893124 AGAAGGCAAATTCAATATCTCATGT 57.107 32.000 0.00 0.00 0.00 3.21
4292 4362 7.652105 CCAAGAAGGCAAATTCAATATCTCATG 59.348 37.037 0.00 0.00 0.00 3.07
4293 4363 7.723324 CCAAGAAGGCAAATTCAATATCTCAT 58.277 34.615 0.00 0.00 0.00 2.90
4294 4364 7.104043 CCAAGAAGGCAAATTCAATATCTCA 57.896 36.000 0.00 0.00 0.00 3.27
4330 4400 2.766651 TATGTCGCCCCACCTCCC 60.767 66.667 0.00 0.00 0.00 4.30
4331 4401 2.808206 CCTATGTCGCCCCACCTCC 61.808 68.421 0.00 0.00 0.00 4.30
4332 4402 2.822399 CCTATGTCGCCCCACCTC 59.178 66.667 0.00 0.00 0.00 3.85
4333 4403 3.480133 GCCTATGTCGCCCCACCT 61.480 66.667 0.00 0.00 0.00 4.00
4334 4404 4.910585 CGCCTATGTCGCCCCACC 62.911 72.222 0.00 0.00 0.00 4.61
4335 4405 2.862674 TTTCGCCTATGTCGCCCCAC 62.863 60.000 0.00 0.00 0.00 4.61
4336 4406 2.661066 TTTCGCCTATGTCGCCCCA 61.661 57.895 0.00 0.00 0.00 4.96
4337 4407 2.178235 GTTTCGCCTATGTCGCCCC 61.178 63.158 0.00 0.00 0.00 5.80
4338 4408 1.448893 TGTTTCGCCTATGTCGCCC 60.449 57.895 0.00 0.00 0.00 6.13
4339 4409 1.713830 GTGTTTCGCCTATGTCGCC 59.286 57.895 0.00 0.00 0.00 5.54
4340 4410 1.343821 CGTGTTTCGCCTATGTCGC 59.656 57.895 0.00 0.00 0.00 5.19
4350 4420 1.617755 ATCAGTGAGCGCGTGTTTCG 61.618 55.000 8.43 0.00 43.12 3.46
4351 4421 0.179240 CATCAGTGAGCGCGTGTTTC 60.179 55.000 8.43 1.36 0.00 2.78
4352 4422 0.599991 TCATCAGTGAGCGCGTGTTT 60.600 50.000 8.43 0.00 0.00 2.83
4353 4423 1.006220 TCATCAGTGAGCGCGTGTT 60.006 52.632 8.43 0.00 0.00 3.32
4354 4424 1.445066 CTCATCAGTGAGCGCGTGT 60.445 57.895 8.43 0.00 44.86 4.49
4355 4425 3.381733 CTCATCAGTGAGCGCGTG 58.618 61.111 8.43 0.00 44.86 5.34
4362 4432 6.297301 CCCTAGGTCTATATCCTCATCAGTGA 60.297 46.154 8.29 0.00 36.60 3.41
4363 4433 5.890985 CCCTAGGTCTATATCCTCATCAGTG 59.109 48.000 8.29 0.00 36.60 3.66
4364 4434 5.557939 ACCCTAGGTCTATATCCTCATCAGT 59.442 44.000 8.29 0.00 36.60 3.41
4365 4435 6.086011 ACCCTAGGTCTATATCCTCATCAG 57.914 45.833 8.29 0.00 36.60 2.90
4366 4436 6.160636 CCTACCCTAGGTCTATATCCTCATCA 59.839 46.154 8.29 0.00 41.18 3.07
4367 4437 6.411086 CCCTACCCTAGGTCTATATCCTCATC 60.411 50.000 8.29 0.00 44.73 2.92
4368 4438 5.437043 CCCTACCCTAGGTCTATATCCTCAT 59.563 48.000 8.29 0.00 44.73 2.90
4369 4439 4.794616 CCCTACCCTAGGTCTATATCCTCA 59.205 50.000 8.29 0.00 44.73 3.86
4370 4440 4.795165 ACCCTACCCTAGGTCTATATCCTC 59.205 50.000 8.29 0.00 44.73 3.71
4371 4441 4.800390 ACCCTACCCTAGGTCTATATCCT 58.200 47.826 8.29 2.82 44.73 3.24
4380 4450 1.149500 GCCTATGACCCTACCCTAGGT 59.851 57.143 8.29 0.00 44.73 3.08
4381 4451 1.552719 GGCCTATGACCCTACCCTAGG 60.553 61.905 0.06 0.06 45.81 3.02
4382 4452 1.433592 AGGCCTATGACCCTACCCTAG 59.566 57.143 1.29 0.00 0.00 3.02
4383 4453 1.149288 CAGGCCTATGACCCTACCCTA 59.851 57.143 3.98 0.00 0.00 3.53
4384 4454 0.104934 CAGGCCTATGACCCTACCCT 60.105 60.000 3.98 0.00 0.00 4.34
4385 4455 0.105142 TCAGGCCTATGACCCTACCC 60.105 60.000 3.98 0.00 0.00 3.69
4386 4456 1.049402 GTCAGGCCTATGACCCTACC 58.951 60.000 3.98 0.00 43.12 3.18
4398 4468 3.372897 GGTAGGGTATATAGGTCAGGCC 58.627 54.545 0.00 0.00 37.58 5.19
4399 4469 3.245875 TGGGTAGGGTATATAGGTCAGGC 60.246 52.174 0.00 0.00 0.00 4.85
4400 4470 4.687262 TGGGTAGGGTATATAGGTCAGG 57.313 50.000 0.00 0.00 0.00 3.86
4401 4471 5.024118 CCTTGGGTAGGGTATATAGGTCAG 58.976 50.000 0.00 0.00 40.67 3.51
4402 4472 5.019657 CCTTGGGTAGGGTATATAGGTCA 57.980 47.826 0.00 0.00 40.67 4.02
4403 4473 5.409712 AACCTTGGGTAGGGTATATAGGTC 58.590 45.833 0.00 0.00 44.33 3.85
4404 4474 5.444830 AACCTTGGGTAGGGTATATAGGT 57.555 43.478 0.00 0.00 44.33 3.08
4411 4481 3.310583 GGGTAGTAACCTTGGGTAGGGTA 60.311 52.174 0.00 0.00 44.33 3.69
4415 4485 5.134725 TCTAGGGTAGTAACCTTGGGTAG 57.865 47.826 13.22 3.15 45.95 3.18
4416 4486 5.522641 CTTCTAGGGTAGTAACCTTGGGTA 58.477 45.833 13.22 0.00 45.95 3.69
4417 4487 4.359996 CTTCTAGGGTAGTAACCTTGGGT 58.640 47.826 13.22 0.00 45.95 4.51
4418 4488 3.134262 GCTTCTAGGGTAGTAACCTTGGG 59.866 52.174 13.22 8.38 45.95 4.12
4419 4489 3.773119 TGCTTCTAGGGTAGTAACCTTGG 59.227 47.826 13.22 6.33 45.95 3.61
4420 4490 5.416271 TTGCTTCTAGGGTAGTAACCTTG 57.584 43.478 13.22 10.99 45.95 3.61
4421 4491 5.045797 CCTTTGCTTCTAGGGTAGTAACCTT 60.046 44.000 13.22 0.00 45.95 3.50
4422 4492 4.470304 CCTTTGCTTCTAGGGTAGTAACCT 59.530 45.833 12.49 12.49 45.95 3.50
4423 4493 4.468868 TCCTTTGCTTCTAGGGTAGTAACC 59.531 45.833 0.00 0.00 45.97 2.85
4424 4494 5.662456 CTCCTTTGCTTCTAGGGTAGTAAC 58.338 45.833 0.00 0.00 32.20 2.50
4425 4495 4.161754 GCTCCTTTGCTTCTAGGGTAGTAA 59.838 45.833 0.00 0.00 32.20 2.24
4426 4496 3.705072 GCTCCTTTGCTTCTAGGGTAGTA 59.295 47.826 0.00 0.00 32.20 1.82
4427 4497 2.502130 GCTCCTTTGCTTCTAGGGTAGT 59.498 50.000 0.00 0.00 32.20 2.73
4428 4498 2.769095 AGCTCCTTTGCTTCTAGGGTAG 59.231 50.000 0.00 0.00 40.93 3.18
4429 4499 2.766828 GAGCTCCTTTGCTTCTAGGGTA 59.233 50.000 0.87 0.00 44.17 3.69
4430 4500 1.557371 GAGCTCCTTTGCTTCTAGGGT 59.443 52.381 0.87 0.00 44.17 4.34
4431 4501 1.556911 TGAGCTCCTTTGCTTCTAGGG 59.443 52.381 12.15 0.00 44.17 3.53
4432 4502 3.055530 TCTTGAGCTCCTTTGCTTCTAGG 60.056 47.826 12.15 0.00 44.17 3.02
4433 4503 4.081752 TCTCTTGAGCTCCTTTGCTTCTAG 60.082 45.833 12.15 0.00 44.17 2.43
4434 4504 3.834813 TCTCTTGAGCTCCTTTGCTTCTA 59.165 43.478 12.15 0.00 44.17 2.10
4435 4505 2.636893 TCTCTTGAGCTCCTTTGCTTCT 59.363 45.455 12.15 0.00 44.17 2.85
4436 4506 2.741517 GTCTCTTGAGCTCCTTTGCTTC 59.258 50.000 12.15 0.00 44.17 3.86
4437 4507 2.105477 TGTCTCTTGAGCTCCTTTGCTT 59.895 45.455 12.15 0.00 44.17 3.91
4439 4509 2.175878 TGTCTCTTGAGCTCCTTTGC 57.824 50.000 12.15 0.00 0.00 3.68
4440 4510 4.874966 CCTATTGTCTCTTGAGCTCCTTTG 59.125 45.833 12.15 0.00 0.00 2.77
4441 4511 4.080638 CCCTATTGTCTCTTGAGCTCCTTT 60.081 45.833 12.15 0.00 0.00 3.11
4442 4512 3.454082 CCCTATTGTCTCTTGAGCTCCTT 59.546 47.826 12.15 0.00 0.00 3.36
4443 4513 3.037549 CCCTATTGTCTCTTGAGCTCCT 58.962 50.000 12.15 0.00 0.00 3.69
4444 4514 3.034635 TCCCTATTGTCTCTTGAGCTCC 58.965 50.000 12.15 0.00 0.00 4.70
4445 4515 3.492482 GCTCCCTATTGTCTCTTGAGCTC 60.492 52.174 6.82 6.82 40.33 4.09
4446 4516 2.433970 GCTCCCTATTGTCTCTTGAGCT 59.566 50.000 0.00 0.00 40.33 4.09
4447 4517 2.801342 CGCTCCCTATTGTCTCTTGAGC 60.801 54.545 0.00 0.00 40.15 4.26
4448 4518 2.801342 GCGCTCCCTATTGTCTCTTGAG 60.801 54.545 0.00 0.00 0.00 3.02
4449 4519 1.137086 GCGCTCCCTATTGTCTCTTGA 59.863 52.381 0.00 0.00 0.00 3.02
4450 4520 1.576356 GCGCTCCCTATTGTCTCTTG 58.424 55.000 0.00 0.00 0.00 3.02
4451 4521 0.466124 GGCGCTCCCTATTGTCTCTT 59.534 55.000 7.64 0.00 0.00 2.85
4452 4522 2.128729 GGCGCTCCCTATTGTCTCT 58.871 57.895 7.64 0.00 0.00 3.10
4453 4523 4.760757 GGCGCTCCCTATTGTCTC 57.239 61.111 7.64 0.00 0.00 3.36
4463 4533 2.464459 CGTCTTCATTGGGCGCTCC 61.464 63.158 3.94 6.36 0.00 4.70
4464 4534 1.696832 GACGTCTTCATTGGGCGCTC 61.697 60.000 8.70 2.47 0.00 5.03
4465 4535 1.741770 GACGTCTTCATTGGGCGCT 60.742 57.895 8.70 0.00 0.00 5.92
4466 4536 2.785258 GACGTCTTCATTGGGCGC 59.215 61.111 8.70 0.00 0.00 6.53
4467 4537 1.413767 CTCGACGTCTTCATTGGGCG 61.414 60.000 14.70 0.00 0.00 6.13
4468 4538 0.389948 ACTCGACGTCTTCATTGGGC 60.390 55.000 14.70 0.00 0.00 5.36
4469 4539 1.350193 CACTCGACGTCTTCATTGGG 58.650 55.000 14.70 0.00 0.00 4.12
4470 4540 0.716108 GCACTCGACGTCTTCATTGG 59.284 55.000 14.70 0.00 0.00 3.16
4471 4541 1.418373 TGCACTCGACGTCTTCATTG 58.582 50.000 14.70 4.73 0.00 2.82
4472 4542 2.148916 TTGCACTCGACGTCTTCATT 57.851 45.000 14.70 0.00 0.00 2.57
4473 4543 2.263077 GATTGCACTCGACGTCTTCAT 58.737 47.619 14.70 0.00 0.00 2.57
4474 4544 1.668919 GGATTGCACTCGACGTCTTCA 60.669 52.381 14.70 1.24 0.00 3.02
4475 4545 0.992802 GGATTGCACTCGACGTCTTC 59.007 55.000 14.70 0.00 0.00 2.87
4476 4546 0.317160 TGGATTGCACTCGACGTCTT 59.683 50.000 14.70 0.00 0.00 3.01
4477 4547 0.388649 GTGGATTGCACTCGACGTCT 60.389 55.000 14.70 0.00 0.00 4.18
4478 4548 0.388649 AGTGGATTGCACTCGACGTC 60.389 55.000 12.38 5.18 0.00 4.34
4479 4549 0.388649 GAGTGGATTGCACTCGACGT 60.389 55.000 20.47 0.00 39.49 4.34
4480 4550 2.363807 GAGTGGATTGCACTCGACG 58.636 57.895 20.47 0.00 39.49 5.12
4484 4554 0.037326 TGGTCGAGTGGATTGCACTC 60.037 55.000 23.89 23.89 43.98 3.51
4485 4555 0.036952 CTGGTCGAGTGGATTGCACT 60.037 55.000 10.90 10.90 35.30 4.40
4486 4556 0.320771 ACTGGTCGAGTGGATTGCAC 60.321 55.000 0.00 0.00 31.75 4.57
4487 4557 0.037326 GACTGGTCGAGTGGATTGCA 60.037 55.000 0.00 0.00 33.83 4.08
4488 4558 0.037326 TGACTGGTCGAGTGGATTGC 60.037 55.000 0.00 0.00 33.83 3.56
4489 4559 2.680312 ATGACTGGTCGAGTGGATTG 57.320 50.000 0.00 0.00 33.83 2.67
4490 4560 3.960755 TGATATGACTGGTCGAGTGGATT 59.039 43.478 0.00 0.00 33.83 3.01
4491 4561 3.319405 GTGATATGACTGGTCGAGTGGAT 59.681 47.826 0.00 0.00 33.83 3.41
4492 4562 2.688446 GTGATATGACTGGTCGAGTGGA 59.312 50.000 0.00 0.00 33.83 4.02
4493 4563 2.690497 AGTGATATGACTGGTCGAGTGG 59.310 50.000 0.00 0.00 33.83 4.00
4494 4564 3.547014 CGAGTGATATGACTGGTCGAGTG 60.547 52.174 0.00 0.00 33.83 3.51
4495 4565 2.614520 CGAGTGATATGACTGGTCGAGT 59.385 50.000 0.00 0.00 37.76 4.18
4496 4566 2.031595 CCGAGTGATATGACTGGTCGAG 60.032 54.545 0.00 0.00 0.00 4.04
4497 4567 1.947456 CCGAGTGATATGACTGGTCGA 59.053 52.381 0.00 0.00 0.00 4.20
4498 4568 1.001268 CCCGAGTGATATGACTGGTCG 60.001 57.143 0.00 0.00 0.00 4.79
4499 4569 2.032620 ACCCGAGTGATATGACTGGTC 58.967 52.381 0.00 0.00 0.00 4.02
4500 4570 2.160721 ACCCGAGTGATATGACTGGT 57.839 50.000 0.00 0.00 0.00 4.00
4501 4571 2.296471 GGTACCCGAGTGATATGACTGG 59.704 54.545 0.00 0.00 0.00 4.00
4502 4572 3.644884 GGTACCCGAGTGATATGACTG 57.355 52.381 0.00 0.00 0.00 3.51
4518 4588 1.412793 GGTCTAGGGAAGGAGGGGTAC 60.413 61.905 0.00 0.00 0.00 3.34
4519 4589 0.939698 GGTCTAGGGAAGGAGGGGTA 59.060 60.000 0.00 0.00 0.00 3.69
4520 4590 1.160289 TGGTCTAGGGAAGGAGGGGT 61.160 60.000 0.00 0.00 0.00 4.95
4521 4591 0.269173 ATGGTCTAGGGAAGGAGGGG 59.731 60.000 0.00 0.00 0.00 4.79
4522 4592 2.050918 GAATGGTCTAGGGAAGGAGGG 58.949 57.143 0.00 0.00 0.00 4.30
4523 4593 1.689273 CGAATGGTCTAGGGAAGGAGG 59.311 57.143 0.00 0.00 0.00 4.30
4524 4594 2.362717 GTCGAATGGTCTAGGGAAGGAG 59.637 54.545 0.00 0.00 0.00 3.69
4525 4595 2.385803 GTCGAATGGTCTAGGGAAGGA 58.614 52.381 0.00 0.00 0.00 3.36
4526 4596 1.413077 GGTCGAATGGTCTAGGGAAGG 59.587 57.143 0.00 0.00 0.00 3.46
4527 4597 2.108168 TGGTCGAATGGTCTAGGGAAG 58.892 52.381 0.00 0.00 0.00 3.46
4528 4598 2.241281 TGGTCGAATGGTCTAGGGAA 57.759 50.000 0.00 0.00 0.00 3.97
4529 4599 2.471815 ATGGTCGAATGGTCTAGGGA 57.528 50.000 0.00 0.00 0.00 4.20
4530 4600 2.963101 TGTATGGTCGAATGGTCTAGGG 59.037 50.000 0.00 0.00 0.00 3.53
4531 4601 4.341235 TCTTGTATGGTCGAATGGTCTAGG 59.659 45.833 0.00 0.00 0.00 3.02
4532 4602 5.515797 TCTTGTATGGTCGAATGGTCTAG 57.484 43.478 0.00 0.00 0.00 2.43
4533 4603 5.925506 TTCTTGTATGGTCGAATGGTCTA 57.074 39.130 0.00 0.00 0.00 2.59
4534 4604 4.819105 TTCTTGTATGGTCGAATGGTCT 57.181 40.909 0.00 0.00 0.00 3.85
4535 4605 4.094442 GGTTTCTTGTATGGTCGAATGGTC 59.906 45.833 0.00 0.00 0.00 4.02
4536 4606 4.007659 GGTTTCTTGTATGGTCGAATGGT 58.992 43.478 0.00 0.00 0.00 3.55
4537 4607 4.006989 TGGTTTCTTGTATGGTCGAATGG 58.993 43.478 0.00 0.00 0.00 3.16
4538 4608 4.695455 AGTGGTTTCTTGTATGGTCGAATG 59.305 41.667 0.00 0.00 0.00 2.67
4539 4609 4.906618 AGTGGTTTCTTGTATGGTCGAAT 58.093 39.130 0.00 0.00 0.00 3.34
4540 4610 4.312443 GAGTGGTTTCTTGTATGGTCGAA 58.688 43.478 0.00 0.00 0.00 3.71
4541 4611 3.613193 CGAGTGGTTTCTTGTATGGTCGA 60.613 47.826 0.00 0.00 0.00 4.20
4542 4612 2.666508 CGAGTGGTTTCTTGTATGGTCG 59.333 50.000 0.00 0.00 0.00 4.79
4543 4613 3.678548 GTCGAGTGGTTTCTTGTATGGTC 59.321 47.826 0.00 0.00 0.00 4.02
4544 4614 3.556423 GGTCGAGTGGTTTCTTGTATGGT 60.556 47.826 0.00 0.00 0.00 3.55
4545 4615 3.000727 GGTCGAGTGGTTTCTTGTATGG 58.999 50.000 0.00 0.00 0.00 2.74
4546 4616 3.659786 TGGTCGAGTGGTTTCTTGTATG 58.340 45.455 0.00 0.00 0.00 2.39
4547 4617 4.345859 TTGGTCGAGTGGTTTCTTGTAT 57.654 40.909 0.00 0.00 0.00 2.29
4548 4618 3.823281 TTGGTCGAGTGGTTTCTTGTA 57.177 42.857 0.00 0.00 0.00 2.41
4549 4619 2.702592 TTGGTCGAGTGGTTTCTTGT 57.297 45.000 0.00 0.00 0.00 3.16
4550 4620 3.138304 TCATTGGTCGAGTGGTTTCTTG 58.862 45.455 0.00 0.00 0.00 3.02
4551 4621 3.485463 TCATTGGTCGAGTGGTTTCTT 57.515 42.857 0.00 0.00 0.00 2.52
4552 4622 3.071023 TCTTCATTGGTCGAGTGGTTTCT 59.929 43.478 0.00 0.00 0.00 2.52
4553 4623 3.186613 GTCTTCATTGGTCGAGTGGTTTC 59.813 47.826 0.00 0.00 0.00 2.78
4554 4624 3.139077 GTCTTCATTGGTCGAGTGGTTT 58.861 45.455 0.00 0.00 0.00 3.27
4555 4625 2.550208 GGTCTTCATTGGTCGAGTGGTT 60.550 50.000 0.00 0.00 0.00 3.67
4556 4626 1.002087 GGTCTTCATTGGTCGAGTGGT 59.998 52.381 0.00 0.00 0.00 4.16
4557 4627 1.001974 TGGTCTTCATTGGTCGAGTGG 59.998 52.381 0.00 0.00 0.00 4.00
4558 4628 2.341257 CTGGTCTTCATTGGTCGAGTG 58.659 52.381 0.00 0.00 0.00 3.51
4559 4629 1.276421 CCTGGTCTTCATTGGTCGAGT 59.724 52.381 0.00 0.00 0.00 4.18
4560 4630 1.550524 TCCTGGTCTTCATTGGTCGAG 59.449 52.381 0.00 0.00 0.00 4.04
4561 4631 1.550524 CTCCTGGTCTTCATTGGTCGA 59.449 52.381 0.00 0.00 0.00 4.20
4562 4632 1.276421 ACTCCTGGTCTTCATTGGTCG 59.724 52.381 0.00 0.00 0.00 4.79
4563 4633 2.675317 CGACTCCTGGTCTTCATTGGTC 60.675 54.545 0.00 0.00 42.44 4.02
4564 4634 1.276421 CGACTCCTGGTCTTCATTGGT 59.724 52.381 0.00 0.00 42.44 3.67
4565 4635 2.009042 GCGACTCCTGGTCTTCATTGG 61.009 57.143 0.00 0.00 42.44 3.16
4566 4636 1.338105 TGCGACTCCTGGTCTTCATTG 60.338 52.381 0.00 0.00 42.44 2.82
4567 4637 0.976641 TGCGACTCCTGGTCTTCATT 59.023 50.000 0.00 0.00 42.44 2.57
4568 4638 2.671145 TGCGACTCCTGGTCTTCAT 58.329 52.632 0.00 0.00 42.44 2.57
4569 4639 4.191243 TGCGACTCCTGGTCTTCA 57.809 55.556 0.00 0.00 42.44 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.