Multiple sequence alignment - TraesCS1B01G203800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G203800 chr1B 100.000 5147 0 0 1 5147 367838833 367843979 0.000000e+00 9505.0
1 TraesCS1B01G203800 chr1B 95.122 41 2 0 3573 3613 330202808 330202768 1.200000e-06 65.8
2 TraesCS1B01G203800 chr1D 93.856 2897 72 27 791 3645 233307382 233310214 0.000000e+00 4266.0
3 TraesCS1B01G203800 chr1D 90.587 818 40 19 1 802 233306563 233307359 0.000000e+00 1050.0
4 TraesCS1B01G203800 chr1D 95.516 446 9 3 3979 4420 233310859 233311297 0.000000e+00 702.0
5 TraesCS1B01G203800 chr1D 88.333 360 11 8 4485 4842 233311288 233311618 2.230000e-108 403.0
6 TraesCS1B01G203800 chr1D 94.553 257 14 0 3631 3887 233310544 233310800 1.040000e-106 398.0
7 TraesCS1B01G203800 chr1D 87.719 171 15 5 4903 5072 233324174 233324339 1.460000e-45 195.0
8 TraesCS1B01G203800 chr1A 93.417 2780 102 33 2 2736 314624897 314622154 0.000000e+00 4045.0
9 TraesCS1B01G203800 chr1A 92.069 1740 48 36 2747 4419 314622183 314620467 0.000000e+00 2366.0
10 TraesCS1B01G203800 chr1A 92.529 348 13 9 4485 4829 314620475 314620138 2.150000e-133 486.0
11 TraesCS1B01G203800 chr1A 86.286 175 18 5 4899 5072 314615567 314615398 8.800000e-43 185.0
12 TraesCS1B01G203800 chr1A 78.125 128 22 6 1 124 41900400 41900525 5.530000e-10 76.8
13 TraesCS1B01G203800 chr2D 86.806 144 15 4 123 264 265846658 265846799 1.920000e-34 158.0
14 TraesCS1B01G203800 chr2D 86.111 144 16 4 123 264 643740148 643740007 8.930000e-33 152.0
15 TraesCS1B01G203800 chr3B 86.111 144 16 4 123 264 357527529 357527670 8.930000e-33 152.0
16 TraesCS1B01G203800 chr7D 85.417 144 17 4 123 264 342626584 342626443 4.150000e-31 147.0
17 TraesCS1B01G203800 chr7D 85.417 144 17 4 123 264 634141033 634141174 4.150000e-31 147.0
18 TraesCS1B01G203800 chr4B 85.417 144 17 4 123 264 3457477 3457618 4.150000e-31 147.0
19 TraesCS1B01G203800 chr4B 85.417 144 17 4 123 264 3517566 3517707 4.150000e-31 147.0
20 TraesCS1B01G203800 chr5D 83.465 127 19 2 1 125 22964795 22964669 3.260000e-22 117.0
21 TraesCS1B01G203800 chr5D 100.000 31 0 0 3688 3718 284968977 284969007 2.000000e-04 58.4
22 TraesCS1B01G203800 chr3A 88.000 75 8 1 50 123 1674769 1674843 2.550000e-13 87.9
23 TraesCS1B01G203800 chr3A 89.583 48 4 1 3577 3624 23655078 23655032 5.570000e-05 60.2
24 TraesCS1B01G203800 chr6A 100.000 32 0 0 1464 1495 7716977 7717008 5.570000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G203800 chr1B 367838833 367843979 5146 False 9505.0 9505 100.000000 1 5147 1 chr1B.!!$F1 5146
1 TraesCS1B01G203800 chr1D 233306563 233311618 5055 False 1363.8 4266 92.569000 1 4842 5 chr1D.!!$F2 4841
2 TraesCS1B01G203800 chr1A 314620138 314624897 4759 True 2299.0 4045 92.671667 2 4829 3 chr1A.!!$R2 4827

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
809 841 0.102844 AGCGAGAGAGAGCAATCAGC 59.897 55.0 0.0 0.00 46.19 4.26 F
1598 1669 0.182061 CCATGACCTGTGATCCTGGG 59.818 60.0 0.0 3.58 36.51 4.45 F
2313 2414 0.247460 TCTCGCATGTCTCCACTTGG 59.753 55.0 0.0 0.00 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2087 2188 0.032130 ACACCACACACGTAGAGCAG 59.968 55.000 0.0 0.0 0.0 4.24 R
2709 2811 2.362397 GAGAGCGAGAGAGAGAGAGAGA 59.638 54.545 0.0 0.0 0.0 3.10 R
4179 4697 0.101579 GAGCTAGTCAAGGAGGCGAC 59.898 60.000 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 69 4.072088 GTTTGCCGAGCGTCGTGG 62.072 66.667 0.00 0.00 38.40 4.94
105 107 0.822164 GCCTGGTATCCGGCGTATAT 59.178 55.000 6.01 0.00 34.72 0.86
139 141 1.013596 TGCAACCACTGTTCAAGACG 58.986 50.000 0.00 0.00 30.42 4.18
151 153 4.578898 AAGACGGTGTGTGCGCGA 62.579 61.111 12.10 0.00 0.00 5.87
168 171 1.003839 GATTGGAGCGGTGGTCACA 60.004 57.895 0.00 0.00 0.00 3.58
246 249 3.058224 CGATGACATAGGCATAGTGTCGA 60.058 47.826 12.80 0.00 43.88 4.20
353 357 5.072741 ACTTCTTGATGTTTGGCTGTATGT 58.927 37.500 0.00 0.00 0.00 2.29
358 362 4.460263 TGATGTTTGGCTGTATGTATCCC 58.540 43.478 0.00 0.00 0.00 3.85
366 370 6.260700 TGGCTGTATGTATCCCAGTTATTT 57.739 37.500 0.00 0.00 0.00 1.40
368 372 7.807198 TGGCTGTATGTATCCCAGTTATTTAA 58.193 34.615 0.00 0.00 0.00 1.52
383 387 6.862608 CAGTTATTTAAAAACCGGGTGTTACC 59.137 38.462 0.10 0.00 35.67 2.85
398 412 6.619801 GGTGTTACCCATCATCTTTGTATC 57.380 41.667 0.00 0.00 30.04 2.24
431 457 5.508200 AATACGTCCTGCTTTGTTGAAAA 57.492 34.783 0.00 0.00 0.00 2.29
570 602 1.509961 ACCCCTGCACCCTATATCTCT 59.490 52.381 0.00 0.00 0.00 3.10
625 657 2.376855 CAAACCCCTTTCTCTCCCTCTT 59.623 50.000 0.00 0.00 0.00 2.85
698 730 1.003464 CATCACACATCAGTCACCCCA 59.997 52.381 0.00 0.00 0.00 4.96
729 761 6.816136 TCAAATCACCAGATCATATACACGT 58.184 36.000 0.00 0.00 31.90 4.49
732 764 5.352643 TCACCAGATCATATACACGTACG 57.647 43.478 15.01 15.01 0.00 3.67
734 766 3.566742 ACCAGATCATATACACGTACGCA 59.433 43.478 16.72 0.58 0.00 5.24
735 767 3.912563 CCAGATCATATACACGTACGCAC 59.087 47.826 16.72 0.00 0.00 5.34
736 768 4.533222 CAGATCATATACACGTACGCACA 58.467 43.478 16.72 0.00 0.00 4.57
737 769 4.378910 CAGATCATATACACGTACGCACAC 59.621 45.833 16.72 0.00 0.00 3.82
749 781 4.555709 GCACACGTCCCACCACCA 62.556 66.667 0.00 0.00 0.00 4.17
802 834 1.437625 AAAAGCAAGCGAGAGAGAGC 58.562 50.000 0.00 0.00 0.00 4.09
803 835 0.319728 AAAGCAAGCGAGAGAGAGCA 59.680 50.000 0.00 0.00 35.48 4.26
805 837 0.536260 AGCAAGCGAGAGAGAGCAAT 59.464 50.000 0.00 0.00 35.48 3.56
806 838 0.929615 GCAAGCGAGAGAGAGCAATC 59.070 55.000 0.00 0.00 35.48 2.67
807 839 1.738365 GCAAGCGAGAGAGAGCAATCA 60.738 52.381 0.00 0.00 35.48 2.57
808 840 2.195096 CAAGCGAGAGAGAGCAATCAG 58.805 52.381 0.00 0.00 35.48 2.90
809 841 0.102844 AGCGAGAGAGAGCAATCAGC 59.897 55.000 0.00 0.00 46.19 4.26
1053 1119 1.148157 CCTTCACGCCAGTATCGCAG 61.148 60.000 0.00 0.00 0.00 5.18
1054 1120 1.756375 CTTCACGCCAGTATCGCAGC 61.756 60.000 0.00 0.00 0.00 5.25
1055 1121 2.499756 TTCACGCCAGTATCGCAGCA 62.500 55.000 0.00 0.00 0.00 4.41
1173 1239 2.310233 CCACTTCTGCGACACCGTG 61.310 63.158 0.00 0.00 38.24 4.94
1196 1262 1.909287 TCGTCCGTGATCAACCCCA 60.909 57.895 0.00 0.00 0.00 4.96
1229 1299 2.575735 TCTCTCTCTCTCTTGAGCCTCA 59.424 50.000 0.00 0.00 40.03 3.86
1234 1304 1.973515 TCTCTCTTGAGCCTCAAAGCA 59.026 47.619 8.74 0.00 40.03 3.91
1254 1324 4.219507 AGCATCTAAGCGTATGTAGCTCAT 59.780 41.667 0.00 0.00 45.31 2.90
1396 1467 2.990479 GTCGACATGAGGGGCCTT 59.010 61.111 11.55 0.00 0.00 4.35
1526 1597 2.659016 CCAGCTCGCTCAACCTCA 59.341 61.111 0.00 0.00 0.00 3.86
1598 1669 0.182061 CCATGACCTGTGATCCTGGG 59.818 60.000 0.00 3.58 36.51 4.45
1599 1670 0.914644 CATGACCTGTGATCCTGGGT 59.085 55.000 10.42 6.27 36.51 4.51
1660 1737 2.290641 GGTTCTTGATGACTTGTTGCGT 59.709 45.455 0.00 0.00 0.00 5.24
1840 1918 4.452733 GGGAAGGAGCCGTCACCG 62.453 72.222 4.89 0.00 0.00 4.94
1882 1960 2.190756 ACGTGAGTGTAGCTAGCCC 58.809 57.895 12.13 2.72 46.97 5.19
1903 1981 1.086696 GCTTCCGCATGCACTTTCTA 58.913 50.000 19.57 0.00 35.78 2.10
1908 1986 4.095410 TCCGCATGCACTTTCTAAAATG 57.905 40.909 19.57 0.00 0.00 2.32
1912 1990 3.853671 GCATGCACTTTCTAAAATGTCCG 59.146 43.478 14.21 0.00 0.00 4.79
2003 2091 3.941704 TCTGGTCATCTCTCTAGAGCA 57.058 47.619 15.35 4.29 41.80 4.26
2072 2173 3.842925 AACACATGGCTCGCCGGTT 62.843 57.895 1.90 2.82 39.42 4.44
2087 2188 2.876550 GCCGGTTTACATGGAACCTATC 59.123 50.000 22.93 12.59 43.47 2.08
2310 2411 1.134580 CCATTCTCGCATGTCTCCACT 60.135 52.381 0.00 0.00 0.00 4.00
2311 2412 2.625737 CATTCTCGCATGTCTCCACTT 58.374 47.619 0.00 0.00 0.00 3.16
2312 2413 2.084610 TTCTCGCATGTCTCCACTTG 57.915 50.000 0.00 0.00 0.00 3.16
2313 2414 0.247460 TCTCGCATGTCTCCACTTGG 59.753 55.000 0.00 0.00 0.00 3.61
2314 2415 0.247460 CTCGCATGTCTCCACTTGGA 59.753 55.000 0.00 0.00 43.08 3.53
2315 2416 0.684535 TCGCATGTCTCCACTTGGAA 59.315 50.000 0.00 0.00 44.91 3.53
2316 2417 1.081892 CGCATGTCTCCACTTGGAAG 58.918 55.000 0.00 0.00 44.91 3.46
2512 2613 8.453238 TTCATCAAGTAAGTAGGAGTAGCTAG 57.547 38.462 0.00 0.00 0.00 3.42
2708 2810 5.419542 ACCTTGTTTTCTTTTGCTTTCCTC 58.580 37.500 0.00 0.00 0.00 3.71
2709 2811 5.187772 ACCTTGTTTTCTTTTGCTTTCCTCT 59.812 36.000 0.00 0.00 0.00 3.69
2710 2812 5.750547 CCTTGTTTTCTTTTGCTTTCCTCTC 59.249 40.000 0.00 0.00 0.00 3.20
2711 2813 6.406288 CCTTGTTTTCTTTTGCTTTCCTCTCT 60.406 38.462 0.00 0.00 0.00 3.10
2712 2814 6.136541 TGTTTTCTTTTGCTTTCCTCTCTC 57.863 37.500 0.00 0.00 0.00 3.20
2713 2815 5.888161 TGTTTTCTTTTGCTTTCCTCTCTCT 59.112 36.000 0.00 0.00 0.00 3.10
2714 2816 6.038714 TGTTTTCTTTTGCTTTCCTCTCTCTC 59.961 38.462 0.00 0.00 0.00 3.20
2715 2817 5.559148 TTCTTTTGCTTTCCTCTCTCTCT 57.441 39.130 0.00 0.00 0.00 3.10
2716 2818 5.146010 TCTTTTGCTTTCCTCTCTCTCTC 57.854 43.478 0.00 0.00 0.00 3.20
2717 2819 4.837860 TCTTTTGCTTTCCTCTCTCTCTCT 59.162 41.667 0.00 0.00 0.00 3.10
2718 2820 4.799564 TTTGCTTTCCTCTCTCTCTCTC 57.200 45.455 0.00 0.00 0.00 3.20
2719 2821 3.737559 TGCTTTCCTCTCTCTCTCTCT 57.262 47.619 0.00 0.00 0.00 3.10
2720 2822 3.620488 TGCTTTCCTCTCTCTCTCTCTC 58.380 50.000 0.00 0.00 0.00 3.20
2721 2823 3.266772 TGCTTTCCTCTCTCTCTCTCTCT 59.733 47.826 0.00 0.00 0.00 3.10
2722 2824 3.879892 GCTTTCCTCTCTCTCTCTCTCTC 59.120 52.174 0.00 0.00 0.00 3.20
2723 2825 4.384647 GCTTTCCTCTCTCTCTCTCTCTCT 60.385 50.000 0.00 0.00 0.00 3.10
2724 2826 5.359194 TTTCCTCTCTCTCTCTCTCTCTC 57.641 47.826 0.00 0.00 0.00 3.20
2725 2827 2.959030 TCCTCTCTCTCTCTCTCTCTCG 59.041 54.545 0.00 0.00 0.00 4.04
2764 2866 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
2766 2868 6.097554 TCTCTCTCTCTCTCTCTCTCTCTTTC 59.902 46.154 0.00 0.00 0.00 2.62
2768 2870 6.097554 TCTCTCTCTCTCTCTCTCTCTTTCTC 59.902 46.154 0.00 0.00 0.00 2.87
2770 2872 6.097554 TCTCTCTCTCTCTCTCTCTTTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
2772 2874 6.097554 TCTCTCTCTCTCTCTCTTTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
2773 2875 5.721480 TCTCTCTCTCTCTCTTTCTCTCTCA 59.279 44.000 0.00 0.00 0.00 3.27
2774 2876 5.734720 TCTCTCTCTCTCTTTCTCTCTCAC 58.265 45.833 0.00 0.00 0.00 3.51
2775 2877 5.485353 TCTCTCTCTCTCTTTCTCTCTCACT 59.515 44.000 0.00 0.00 0.00 3.41
2776 2878 5.491070 TCTCTCTCTCTTTCTCTCTCACTG 58.509 45.833 0.00 0.00 0.00 3.66
2777 2879 5.013079 TCTCTCTCTCTTTCTCTCTCACTGT 59.987 44.000 0.00 0.00 0.00 3.55
2778 2880 5.630121 TCTCTCTCTTTCTCTCTCACTGTT 58.370 41.667 0.00 0.00 0.00 3.16
2779 2881 6.068010 TCTCTCTCTTTCTCTCTCACTGTTT 58.932 40.000 0.00 0.00 0.00 2.83
2780 2882 6.016360 TCTCTCTCTTTCTCTCTCACTGTTTG 60.016 42.308 0.00 0.00 0.00 2.93
2814 2916 8.225603 AGAGAGAGAGAAGTTAATGAGACATC 57.774 38.462 0.00 0.00 0.00 3.06
2865 2972 0.462789 ATAATGGGGGTGTCGTCGTC 59.537 55.000 0.00 0.00 0.00 4.20
2926 3051 5.069119 TCCCTTTCCTTTTGCTCTTTTCTTC 59.931 40.000 0.00 0.00 0.00 2.87
3060 3185 3.075148 GTCAGTGCCCTTCTTCCTTAAC 58.925 50.000 0.00 0.00 0.00 2.01
3066 3191 2.039879 GCCCTTCTTCCTTAACCTCACA 59.960 50.000 0.00 0.00 0.00 3.58
3079 3204 4.551702 AACCTCACATGCACTACACATA 57.448 40.909 0.00 0.00 0.00 2.29
3083 3208 5.043903 CCTCACATGCACTACACATACTAC 58.956 45.833 0.00 0.00 0.00 2.73
3221 3350 6.512297 ACCTTTAATTGTTTGATGTGGTGAC 58.488 36.000 0.00 0.00 0.00 3.67
3382 3511 7.883311 ACATAGTACATACTTCAGCTTTTTGGT 59.117 33.333 0.00 0.00 37.73 3.67
3518 3648 6.672147 ACTTCAAGCACATGTCAATACTTTC 58.328 36.000 0.00 0.00 0.00 2.62
3524 3654 8.482429 CAAGCACATGTCAATACTTTCTTTTTC 58.518 33.333 0.00 0.00 0.00 2.29
3718 4193 7.556844 TGGTCAAACTTAAACAAATTTGGCTA 58.443 30.769 21.74 9.78 36.96 3.93
3782 4283 2.841442 AGCGTATAGATTCAAGCCCC 57.159 50.000 0.00 0.00 0.00 5.80
3807 4308 7.958567 CCAAAGCATGCAACAAAAATTATGTAG 59.041 33.333 21.98 0.00 0.00 2.74
3853 4354 0.698238 TTGTCCAAGGTCATGGGGAG 59.302 55.000 0.00 0.00 41.05 4.30
3913 4414 7.986889 AGCTTTAATTTTGTTGGAGATTGTGTT 59.013 29.630 0.00 0.00 0.00 3.32
3942 4443 1.821136 CAAATTCTCAGGACAAGGCCC 59.179 52.381 0.00 0.00 0.00 5.80
3944 4445 0.909610 ATTCTCAGGACAAGGCCCGA 60.910 55.000 0.00 0.00 0.00 5.14
4012 4530 7.771183 TGTTATTCAGCCTGTATTTCCATTTC 58.229 34.615 0.00 0.00 0.00 2.17
4034 4552 3.568430 CCTTATCCATTTTCGGCTAACCC 59.432 47.826 0.00 0.00 0.00 4.11
4035 4553 2.818751 ATCCATTTTCGGCTAACCCA 57.181 45.000 0.00 0.00 0.00 4.51
4036 4554 2.818751 TCCATTTTCGGCTAACCCAT 57.181 45.000 0.00 0.00 0.00 4.00
4037 4555 3.935818 TCCATTTTCGGCTAACCCATA 57.064 42.857 0.00 0.00 0.00 2.74
4110 4628 1.846439 CATGGGCTTCTAAAGGAGGGA 59.154 52.381 0.00 0.00 0.00 4.20
4338 4862 1.003355 TAGCACACTTCCTGCCTGC 60.003 57.895 0.00 0.00 35.01 4.85
4406 4930 5.609423 AGTTAATCACTCTCCTCATGCATC 58.391 41.667 0.00 0.00 0.00 3.91
4418 4942 3.689161 CCTCATGCATCGTTTCCACTTAA 59.311 43.478 0.00 0.00 0.00 1.85
4419 4943 4.336433 CCTCATGCATCGTTTCCACTTAAT 59.664 41.667 0.00 0.00 0.00 1.40
4420 4944 5.484173 TCATGCATCGTTTCCACTTAATC 57.516 39.130 0.00 0.00 0.00 1.75
4421 4945 4.940654 TCATGCATCGTTTCCACTTAATCA 59.059 37.500 0.00 0.00 0.00 2.57
4422 4946 5.589855 TCATGCATCGTTTCCACTTAATCAT 59.410 36.000 0.00 0.00 0.00 2.45
4423 4947 5.484173 TGCATCGTTTCCACTTAATCATC 57.516 39.130 0.00 0.00 0.00 2.92
4424 4948 4.940654 TGCATCGTTTCCACTTAATCATCA 59.059 37.500 0.00 0.00 0.00 3.07
4425 4949 5.414144 TGCATCGTTTCCACTTAATCATCAA 59.586 36.000 0.00 0.00 0.00 2.57
4426 4950 5.967674 GCATCGTTTCCACTTAATCATCAAG 59.032 40.000 0.00 0.00 0.00 3.02
4427 4951 6.183360 GCATCGTTTCCACTTAATCATCAAGA 60.183 38.462 0.00 0.00 0.00 3.02
4428 4952 6.721571 TCGTTTCCACTTAATCATCAAGAC 57.278 37.500 0.00 0.00 0.00 3.01
4429 4953 6.227522 TCGTTTCCACTTAATCATCAAGACA 58.772 36.000 0.00 0.00 0.00 3.41
4430 4954 6.147164 TCGTTTCCACTTAATCATCAAGACAC 59.853 38.462 0.00 0.00 0.00 3.67
4431 4955 6.147821 CGTTTCCACTTAATCATCAAGACACT 59.852 38.462 0.00 0.00 0.00 3.55
4432 4956 7.301054 GTTTCCACTTAATCATCAAGACACTG 58.699 38.462 0.00 0.00 0.00 3.66
4433 4957 6.114187 TCCACTTAATCATCAAGACACTGT 57.886 37.500 0.00 0.00 0.00 3.55
4434 4958 5.934043 TCCACTTAATCATCAAGACACTGTG 59.066 40.000 6.19 6.19 0.00 3.66
4435 4959 5.122869 CCACTTAATCATCAAGACACTGTGG 59.877 44.000 13.09 0.00 34.23 4.17
4436 4960 5.702670 CACTTAATCATCAAGACACTGTGGT 59.297 40.000 13.09 0.00 0.00 4.16
4437 4961 6.205464 CACTTAATCATCAAGACACTGTGGTT 59.795 38.462 13.09 2.31 0.00 3.67
4438 4962 6.772716 ACTTAATCATCAAGACACTGTGGTTT 59.227 34.615 13.09 3.10 0.00 3.27
4439 4963 5.695851 AATCATCAAGACACTGTGGTTTC 57.304 39.130 13.09 0.66 0.00 2.78
4440 4964 4.422073 TCATCAAGACACTGTGGTTTCT 57.578 40.909 13.09 3.18 34.36 2.52
4441 4965 4.129380 TCATCAAGACACTGTGGTTTCTG 58.871 43.478 13.09 6.15 33.37 3.02
4442 4966 3.627395 TCAAGACACTGTGGTTTCTGT 57.373 42.857 13.09 0.00 33.37 3.41
4443 4967 4.746535 TCAAGACACTGTGGTTTCTGTA 57.253 40.909 13.09 0.00 33.37 2.74
4444 4968 5.092554 TCAAGACACTGTGGTTTCTGTAA 57.907 39.130 13.09 0.00 33.37 2.41
4445 4969 5.680619 TCAAGACACTGTGGTTTCTGTAAT 58.319 37.500 13.09 0.00 33.37 1.89
4446 4970 6.119536 TCAAGACACTGTGGTTTCTGTAATT 58.880 36.000 13.09 0.00 33.37 1.40
4447 4971 6.038161 TCAAGACACTGTGGTTTCTGTAATTG 59.962 38.462 13.09 1.77 33.37 2.32
4448 4972 4.821805 AGACACTGTGGTTTCTGTAATTGG 59.178 41.667 13.09 0.00 32.03 3.16
4449 4973 4.787551 ACACTGTGGTTTCTGTAATTGGA 58.212 39.130 13.09 0.00 0.00 3.53
4450 4974 5.197451 ACACTGTGGTTTCTGTAATTGGAA 58.803 37.500 13.09 0.00 0.00 3.53
4451 4975 5.654650 ACACTGTGGTTTCTGTAATTGGAAA 59.345 36.000 13.09 0.00 0.00 3.13
4452 4976 6.323739 ACACTGTGGTTTCTGTAATTGGAAAT 59.676 34.615 13.09 0.00 34.60 2.17
4453 4977 7.147742 ACACTGTGGTTTCTGTAATTGGAAATT 60.148 33.333 13.09 0.00 34.60 1.82
4454 4978 8.356657 CACTGTGGTTTCTGTAATTGGAAATTA 58.643 33.333 0.00 0.00 34.60 1.40
4455 4979 8.919145 ACTGTGGTTTCTGTAATTGGAAATTAA 58.081 29.630 0.00 0.00 34.60 1.40
4456 4980 9.757227 CTGTGGTTTCTGTAATTGGAAATTAAA 57.243 29.630 0.00 0.00 34.60 1.52
4457 4981 9.757227 TGTGGTTTCTGTAATTGGAAATTAAAG 57.243 29.630 4.25 4.25 34.60 1.85
4458 4982 9.974980 GTGGTTTCTGTAATTGGAAATTAAAGA 57.025 29.630 8.06 8.06 34.60 2.52
4460 4984 9.639601 GGTTTCTGTAATTGGAAATTAAAGAGG 57.360 33.333 10.86 0.00 31.59 3.69
4461 4985 9.639601 GTTTCTGTAATTGGAAATTAAAGAGGG 57.360 33.333 10.86 0.00 31.59 4.30
4462 4986 8.950007 TTCTGTAATTGGAAATTAAAGAGGGT 57.050 30.769 10.86 0.00 31.59 4.34
4463 4987 8.348285 TCTGTAATTGGAAATTAAAGAGGGTG 57.652 34.615 8.06 0.00 0.00 4.61
4464 4988 6.930731 TGTAATTGGAAATTAAAGAGGGTGC 58.069 36.000 0.00 0.00 0.00 5.01
4465 4989 6.723977 TGTAATTGGAAATTAAAGAGGGTGCT 59.276 34.615 0.00 0.00 0.00 4.40
4466 4990 5.665916 ATTGGAAATTAAAGAGGGTGCTG 57.334 39.130 0.00 0.00 0.00 4.41
4467 4991 4.112634 TGGAAATTAAAGAGGGTGCTGT 57.887 40.909 0.00 0.00 0.00 4.40
4468 4992 4.079253 TGGAAATTAAAGAGGGTGCTGTC 58.921 43.478 0.00 0.00 0.00 3.51
4469 4993 4.202567 TGGAAATTAAAGAGGGTGCTGTCT 60.203 41.667 0.00 0.00 0.00 3.41
4470 4994 4.767409 GGAAATTAAAGAGGGTGCTGTCTT 59.233 41.667 0.00 0.00 34.37 3.01
4471 4995 5.335976 GGAAATTAAAGAGGGTGCTGTCTTG 60.336 44.000 0.00 0.00 33.21 3.02
4472 4996 3.857157 TTAAAGAGGGTGCTGTCTTGT 57.143 42.857 0.00 0.00 33.21 3.16
4473 4997 2.736670 AAAGAGGGTGCTGTCTTGTT 57.263 45.000 0.00 0.00 33.21 2.83
4474 4998 2.262423 AAGAGGGTGCTGTCTTGTTC 57.738 50.000 0.00 0.00 31.63 3.18
4475 4999 1.131638 AGAGGGTGCTGTCTTGTTCA 58.868 50.000 0.00 0.00 0.00 3.18
4476 5000 1.490490 AGAGGGTGCTGTCTTGTTCAA 59.510 47.619 0.00 0.00 0.00 2.69
4477 5001 2.092429 AGAGGGTGCTGTCTTGTTCAAA 60.092 45.455 0.00 0.00 0.00 2.69
4478 5002 2.687935 GAGGGTGCTGTCTTGTTCAAAA 59.312 45.455 0.00 0.00 0.00 2.44
4479 5003 3.096092 AGGGTGCTGTCTTGTTCAAAAA 58.904 40.909 0.00 0.00 0.00 1.94
4528 5052 3.594603 ATTGTTCTGCACGTACTAGCT 57.405 42.857 7.73 0.00 0.00 3.32
4529 5053 4.713824 ATTGTTCTGCACGTACTAGCTA 57.286 40.909 7.73 0.00 0.00 3.32
4530 5054 3.759527 TGTTCTGCACGTACTAGCTAG 57.240 47.619 19.44 19.44 0.00 3.42
4533 5057 4.880120 TGTTCTGCACGTACTAGCTAGTAT 59.120 41.667 31.04 17.11 40.55 2.12
4534 5058 6.051074 TGTTCTGCACGTACTAGCTAGTATA 58.949 40.000 31.04 13.91 40.55 1.47
4679 5203 1.101331 CCAAGCAAGCTCATTCCCTC 58.899 55.000 0.00 0.00 0.00 4.30
4709 5233 2.037367 ACAGGCCGGTCTCTAGCA 59.963 61.111 5.00 0.00 0.00 3.49
4782 5306 1.618837 TCTCCTTTCCCTCTTGACGTG 59.381 52.381 0.00 0.00 0.00 4.49
4807 5332 4.274147 CCTACACATACACCTCTCTCTGT 58.726 47.826 0.00 0.00 0.00 3.41
4810 5335 2.098280 CACATACACCTCTCTCTGTCGG 59.902 54.545 0.00 0.00 0.00 4.79
4826 5352 4.393990 TCTGTCGGTGTATATATGTAGCCG 59.606 45.833 13.00 13.00 39.13 5.52
4829 5355 3.018856 CGGTGTATATATGTAGCCGGGA 58.981 50.000 2.18 0.00 34.77 5.14
4842 5368 2.418083 CCGGGACTGGGTACGTACC 61.418 68.421 32.59 32.59 45.71 3.34
4857 5383 3.313274 CGTACCCGTGCACATTAATTC 57.687 47.619 18.64 0.00 0.00 2.17
4858 5384 2.933906 CGTACCCGTGCACATTAATTCT 59.066 45.455 18.64 0.00 0.00 2.40
4859 5385 3.000925 CGTACCCGTGCACATTAATTCTC 59.999 47.826 18.64 0.00 0.00 2.87
4860 5386 2.365582 ACCCGTGCACATTAATTCTCC 58.634 47.619 18.64 0.00 0.00 3.71
4861 5387 2.290641 ACCCGTGCACATTAATTCTCCA 60.291 45.455 18.64 0.00 0.00 3.86
4862 5388 2.097466 CCCGTGCACATTAATTCTCCAC 59.903 50.000 18.64 0.00 0.00 4.02
4863 5389 3.009723 CCGTGCACATTAATTCTCCACT 58.990 45.455 18.64 0.00 0.00 4.00
4864 5390 3.181507 CCGTGCACATTAATTCTCCACTG 60.182 47.826 18.64 0.00 0.00 3.66
4865 5391 3.684305 CGTGCACATTAATTCTCCACTGA 59.316 43.478 18.64 0.00 0.00 3.41
4866 5392 4.201753 CGTGCACATTAATTCTCCACTGAG 60.202 45.833 18.64 0.00 40.17 3.35
4867 5393 3.691118 TGCACATTAATTCTCCACTGAGC 59.309 43.478 0.00 0.00 38.58 4.26
4868 5394 3.944015 GCACATTAATTCTCCACTGAGCT 59.056 43.478 0.00 0.00 38.58 4.09
4869 5395 4.397417 GCACATTAATTCTCCACTGAGCTT 59.603 41.667 0.00 0.00 38.58 3.74
4870 5396 5.105997 GCACATTAATTCTCCACTGAGCTTT 60.106 40.000 0.00 0.00 38.58 3.51
4871 5397 6.549952 CACATTAATTCTCCACTGAGCTTTC 58.450 40.000 0.00 0.00 38.58 2.62
4872 5398 6.373774 CACATTAATTCTCCACTGAGCTTTCT 59.626 38.462 0.00 0.00 38.58 2.52
4873 5399 6.597280 ACATTAATTCTCCACTGAGCTTTCTC 59.403 38.462 0.00 0.00 38.58 2.87
4874 5400 3.625649 ATTCTCCACTGAGCTTTCTCC 57.374 47.619 0.00 0.00 38.58 3.71
4875 5401 1.270907 TCTCCACTGAGCTTTCTCCC 58.729 55.000 0.00 0.00 38.58 4.30
4876 5402 0.108424 CTCCACTGAGCTTTCTCCCG 60.108 60.000 0.00 0.00 38.58 5.14
4877 5403 1.743252 CCACTGAGCTTTCTCCCGC 60.743 63.158 0.00 0.00 38.58 6.13
4878 5404 1.294780 CACTGAGCTTTCTCCCGCT 59.705 57.895 0.00 0.00 38.58 5.52
4879 5405 1.018226 CACTGAGCTTTCTCCCGCTG 61.018 60.000 0.00 0.00 38.58 5.18
4880 5406 1.449246 CTGAGCTTTCTCCCGCTGG 60.449 63.158 0.00 0.00 38.58 4.85
4881 5407 1.892819 CTGAGCTTTCTCCCGCTGGA 61.893 60.000 0.00 0.00 38.58 3.86
4889 5415 2.607750 TCCCGCTGGAGCTTCCTT 60.608 61.111 0.00 0.00 37.46 3.36
4890 5416 1.305802 TCCCGCTGGAGCTTCCTTA 60.306 57.895 0.00 0.00 37.46 2.69
4891 5417 0.907704 TCCCGCTGGAGCTTCCTTAA 60.908 55.000 0.00 0.00 37.46 1.85
4892 5418 0.462759 CCCGCTGGAGCTTCCTTAAG 60.463 60.000 0.00 0.00 37.46 1.85
4893 5419 0.250513 CCGCTGGAGCTTCCTTAAGT 59.749 55.000 0.97 0.00 37.46 2.24
4894 5420 1.339151 CCGCTGGAGCTTCCTTAAGTT 60.339 52.381 0.97 0.00 37.46 2.66
4895 5421 2.427506 CGCTGGAGCTTCCTTAAGTTT 58.572 47.619 0.97 0.00 37.46 2.66
4896 5422 2.416893 CGCTGGAGCTTCCTTAAGTTTC 59.583 50.000 0.97 0.00 37.46 2.78
4897 5423 3.680490 GCTGGAGCTTCCTTAAGTTTCT 58.320 45.455 0.97 0.00 37.46 2.52
4898 5424 3.687212 GCTGGAGCTTCCTTAAGTTTCTC 59.313 47.826 0.97 2.80 37.46 2.87
4899 5425 4.804261 GCTGGAGCTTCCTTAAGTTTCTCA 60.804 45.833 0.97 0.00 37.46 3.27
4900 5426 5.304686 TGGAGCTTCCTTAAGTTTCTCAA 57.695 39.130 0.97 0.00 37.46 3.02
4901 5427 5.063880 TGGAGCTTCCTTAAGTTTCTCAAC 58.936 41.667 0.97 0.00 37.46 3.18
4902 5428 5.063880 GGAGCTTCCTTAAGTTTCTCAACA 58.936 41.667 0.97 0.00 34.99 3.33
4903 5429 5.531287 GGAGCTTCCTTAAGTTTCTCAACAA 59.469 40.000 0.97 0.00 34.99 2.83
4904 5430 6.207614 GGAGCTTCCTTAAGTTTCTCAACAAT 59.792 38.462 0.97 0.00 34.99 2.71
4905 5431 7.390718 GGAGCTTCCTTAAGTTTCTCAACAATA 59.609 37.037 0.97 0.00 34.99 1.90
4906 5432 8.691661 AGCTTCCTTAAGTTTCTCAACAATAA 57.308 30.769 0.97 0.00 35.05 1.40
4907 5433 9.131791 AGCTTCCTTAAGTTTCTCAACAATAAA 57.868 29.630 0.97 0.00 35.05 1.40
4908 5434 9.744468 GCTTCCTTAAGTTTCTCAACAATAAAA 57.256 29.630 0.97 0.00 35.05 1.52
4927 5453 4.639135 AAAAATATTTCGCTGGAGAGGC 57.361 40.909 0.10 0.00 0.00 4.70
4928 5454 3.281727 AAATATTTCGCTGGAGAGGCA 57.718 42.857 0.00 0.00 0.00 4.75
4929 5455 3.281727 AATATTTCGCTGGAGAGGCAA 57.718 42.857 0.00 0.00 0.00 4.52
4930 5456 2.779755 TATTTCGCTGGAGAGGCAAA 57.220 45.000 0.00 0.00 0.00 3.68
4931 5457 1.909700 ATTTCGCTGGAGAGGCAAAA 58.090 45.000 0.00 0.00 0.00 2.44
4932 5458 1.238439 TTTCGCTGGAGAGGCAAAAG 58.762 50.000 0.00 0.00 0.00 2.27
4933 5459 0.396435 TTCGCTGGAGAGGCAAAAGA 59.604 50.000 0.00 0.00 0.00 2.52
4934 5460 0.615331 TCGCTGGAGAGGCAAAAGAT 59.385 50.000 0.00 0.00 0.00 2.40
4935 5461 0.731417 CGCTGGAGAGGCAAAAGATG 59.269 55.000 0.00 0.00 0.00 2.90
4936 5462 1.831580 GCTGGAGAGGCAAAAGATGT 58.168 50.000 0.00 0.00 0.00 3.06
4937 5463 2.165998 GCTGGAGAGGCAAAAGATGTT 58.834 47.619 0.00 0.00 0.00 2.71
4938 5464 3.347216 GCTGGAGAGGCAAAAGATGTTA 58.653 45.455 0.00 0.00 0.00 2.41
4939 5465 3.758554 GCTGGAGAGGCAAAAGATGTTAA 59.241 43.478 0.00 0.00 0.00 2.01
4940 5466 4.218417 GCTGGAGAGGCAAAAGATGTTAAA 59.782 41.667 0.00 0.00 0.00 1.52
4941 5467 5.105595 GCTGGAGAGGCAAAAGATGTTAAAT 60.106 40.000 0.00 0.00 0.00 1.40
4942 5468 6.573094 GCTGGAGAGGCAAAAGATGTTAAATT 60.573 38.462 0.00 0.00 0.00 1.82
4943 5469 6.924111 TGGAGAGGCAAAAGATGTTAAATTC 58.076 36.000 0.00 0.00 0.00 2.17
4944 5470 6.721208 TGGAGAGGCAAAAGATGTTAAATTCT 59.279 34.615 0.00 0.00 0.00 2.40
4945 5471 7.233348 TGGAGAGGCAAAAGATGTTAAATTCTT 59.767 33.333 0.00 0.00 33.69 2.52
4946 5472 7.543520 GGAGAGGCAAAAGATGTTAAATTCTTG 59.456 37.037 2.77 0.00 32.65 3.02
4947 5473 7.381323 AGAGGCAAAAGATGTTAAATTCTTGG 58.619 34.615 2.77 1.23 32.65 3.61
4948 5474 6.466812 AGGCAAAAGATGTTAAATTCTTGGG 58.533 36.000 2.77 0.96 32.65 4.12
4949 5475 5.643348 GGCAAAAGATGTTAAATTCTTGGGG 59.357 40.000 2.77 0.00 32.65 4.96
4950 5476 6.230472 GCAAAAGATGTTAAATTCTTGGGGT 58.770 36.000 2.77 0.00 32.65 4.95
4951 5477 6.368791 GCAAAAGATGTTAAATTCTTGGGGTC 59.631 38.462 2.77 0.00 32.65 4.46
4952 5478 7.441017 CAAAAGATGTTAAATTCTTGGGGTCA 58.559 34.615 2.77 0.00 32.65 4.02
4953 5479 7.610580 AAAGATGTTAAATTCTTGGGGTCAA 57.389 32.000 2.77 0.00 32.65 3.18
4954 5480 7.797121 AAGATGTTAAATTCTTGGGGTCAAT 57.203 32.000 1.42 0.00 31.15 2.57
4955 5481 7.797121 AGATGTTAAATTCTTGGGGTCAATT 57.203 32.000 0.00 0.00 31.75 2.32
4956 5482 7.614494 AGATGTTAAATTCTTGGGGTCAATTG 58.386 34.615 0.00 0.00 31.75 2.32
4957 5483 6.107901 TGTTAAATTCTTGGGGTCAATTGG 57.892 37.500 5.42 0.00 31.75 3.16
4958 5484 5.841237 TGTTAAATTCTTGGGGTCAATTGGA 59.159 36.000 5.42 0.00 31.75 3.53
4959 5485 4.890158 AAATTCTTGGGGTCAATTGGAC 57.110 40.909 5.42 2.73 46.20 4.02
4960 5486 3.833559 ATTCTTGGGGTCAATTGGACT 57.166 42.857 5.42 0.00 46.16 3.85
4961 5487 4.946160 ATTCTTGGGGTCAATTGGACTA 57.054 40.909 5.42 0.00 46.16 2.59
4962 5488 4.733077 TTCTTGGGGTCAATTGGACTAA 57.267 40.909 5.42 0.20 46.16 2.24
4963 5489 4.946160 TCTTGGGGTCAATTGGACTAAT 57.054 40.909 5.42 0.00 46.16 1.73
4964 5490 5.269554 TCTTGGGGTCAATTGGACTAATT 57.730 39.130 5.42 0.00 46.16 1.40
4965 5491 5.261216 TCTTGGGGTCAATTGGACTAATTC 58.739 41.667 5.42 0.00 46.16 2.17
4966 5492 4.946160 TGGGGTCAATTGGACTAATTCT 57.054 40.909 5.42 0.00 46.16 2.40
4967 5493 5.269554 TGGGGTCAATTGGACTAATTCTT 57.730 39.130 5.42 0.00 46.16 2.52
4968 5494 5.016173 TGGGGTCAATTGGACTAATTCTTG 58.984 41.667 5.42 0.00 46.16 3.02
4969 5495 4.402474 GGGGTCAATTGGACTAATTCTTGG 59.598 45.833 5.42 0.00 46.16 3.61
4970 5496 5.261216 GGGTCAATTGGACTAATTCTTGGA 58.739 41.667 5.42 0.00 46.16 3.53
4971 5497 5.893824 GGGTCAATTGGACTAATTCTTGGAT 59.106 40.000 5.42 0.00 46.16 3.41
4972 5498 6.183360 GGGTCAATTGGACTAATTCTTGGATG 60.183 42.308 5.42 0.00 46.16 3.51
4973 5499 6.268566 GTCAATTGGACTAATTCTTGGATGC 58.731 40.000 5.42 0.00 43.46 3.91
4974 5500 5.066375 TCAATTGGACTAATTCTTGGATGCG 59.934 40.000 5.42 0.00 36.87 4.73
4975 5501 3.904800 TGGACTAATTCTTGGATGCGA 57.095 42.857 0.00 0.00 0.00 5.10
4976 5502 3.531538 TGGACTAATTCTTGGATGCGAC 58.468 45.455 0.00 0.00 0.00 5.19
4977 5503 2.540101 GGACTAATTCTTGGATGCGACG 59.460 50.000 0.00 0.00 0.00 5.12
4978 5504 3.444916 GACTAATTCTTGGATGCGACGA 58.555 45.455 0.00 0.00 0.00 4.20
4979 5505 4.051922 GACTAATTCTTGGATGCGACGAT 58.948 43.478 0.00 0.00 0.00 3.73
4980 5506 3.804325 ACTAATTCTTGGATGCGACGATG 59.196 43.478 0.00 0.00 0.00 3.84
4981 5507 0.940126 ATTCTTGGATGCGACGATGC 59.060 50.000 0.00 0.00 0.00 3.91
5003 5529 3.771160 GGACCCGTCCGCATCTGT 61.771 66.667 0.00 0.00 40.36 3.41
5004 5530 2.202756 GACCCGTCCGCATCTGTC 60.203 66.667 0.00 0.00 0.00 3.51
5005 5531 3.718210 GACCCGTCCGCATCTGTCC 62.718 68.421 0.00 0.00 0.00 4.02
5006 5532 3.770040 CCCGTCCGCATCTGTCCA 61.770 66.667 0.00 0.00 0.00 4.02
5007 5533 2.509336 CCGTCCGCATCTGTCCAC 60.509 66.667 0.00 0.00 0.00 4.02
5008 5534 2.261361 CGTCCGCATCTGTCCACA 59.739 61.111 0.00 0.00 0.00 4.17
5009 5535 2.094659 CGTCCGCATCTGTCCACAC 61.095 63.158 0.00 0.00 0.00 3.82
5010 5536 2.094659 GTCCGCATCTGTCCACACG 61.095 63.158 0.00 0.00 0.00 4.49
5011 5537 2.048222 CCGCATCTGTCCACACGT 60.048 61.111 0.00 0.00 0.00 4.49
5012 5538 1.214325 CCGCATCTGTCCACACGTA 59.786 57.895 0.00 0.00 0.00 3.57
5013 5539 1.076533 CCGCATCTGTCCACACGTAC 61.077 60.000 0.00 0.00 0.00 3.67
5014 5540 1.403225 CGCATCTGTCCACACGTACG 61.403 60.000 15.01 15.01 0.00 3.67
5015 5541 1.076533 GCATCTGTCCACACGTACGG 61.077 60.000 21.06 11.05 0.00 4.02
5016 5542 0.524414 CATCTGTCCACACGTACGGA 59.476 55.000 21.06 3.86 35.55 4.69
5017 5543 0.809385 ATCTGTCCACACGTACGGAG 59.191 55.000 21.06 14.04 34.61 4.63
5018 5544 0.250424 TCTGTCCACACGTACGGAGA 60.250 55.000 21.06 7.43 29.98 3.71
5019 5545 0.809385 CTGTCCACACGTACGGAGAT 59.191 55.000 21.06 0.00 29.98 2.75
5020 5546 0.524414 TGTCCACACGTACGGAGATG 59.476 55.000 21.06 11.09 29.98 2.90
5021 5547 0.801067 GTCCACACGTACGGAGATGC 60.801 60.000 21.06 1.84 29.98 3.91
5022 5548 1.214325 CCACACGTACGGAGATGCA 59.786 57.895 21.06 0.00 0.00 3.96
5023 5549 1.076533 CCACACGTACGGAGATGCAC 61.077 60.000 21.06 0.00 0.00 4.57
5024 5550 0.109272 CACACGTACGGAGATGCACT 60.109 55.000 21.06 0.00 0.00 4.40
5025 5551 1.131693 CACACGTACGGAGATGCACTA 59.868 52.381 21.06 0.00 0.00 2.74
5026 5552 1.814394 ACACGTACGGAGATGCACTAA 59.186 47.619 21.06 0.00 0.00 2.24
5027 5553 2.426024 ACACGTACGGAGATGCACTAAT 59.574 45.455 21.06 0.00 0.00 1.73
5028 5554 3.043586 CACGTACGGAGATGCACTAATC 58.956 50.000 21.06 0.00 0.00 1.75
5029 5555 2.950309 ACGTACGGAGATGCACTAATCT 59.050 45.455 21.06 0.00 39.66 2.40
5030 5556 3.243101 ACGTACGGAGATGCACTAATCTG 60.243 47.826 21.06 0.00 37.03 2.90
5031 5557 2.231215 ACGGAGATGCACTAATCTGC 57.769 50.000 0.00 0.00 40.54 4.26
5032 5558 1.759445 ACGGAGATGCACTAATCTGCT 59.241 47.619 5.23 0.00 41.46 4.24
5033 5559 2.133553 CGGAGATGCACTAATCTGCTG 58.866 52.381 5.23 0.00 41.46 4.41
5034 5560 1.872313 GGAGATGCACTAATCTGCTGC 59.128 52.381 0.00 0.00 40.71 5.25
5035 5561 2.485124 GGAGATGCACTAATCTGCTGCT 60.485 50.000 0.00 0.00 40.71 4.24
5036 5562 2.544686 GAGATGCACTAATCTGCTGCTG 59.455 50.000 0.00 0.00 37.03 4.41
5037 5563 1.002684 GATGCACTAATCTGCTGCTGC 60.003 52.381 8.89 8.89 38.07 5.25
5038 5564 0.035725 TGCACTAATCTGCTGCTGCT 60.036 50.000 17.00 0.00 40.48 4.24
5039 5565 0.377554 GCACTAATCTGCTGCTGCTG 59.622 55.000 17.00 15.94 40.48 4.41
5048 5574 3.613030 TCTGCTGCTGCTGAATTAATCA 58.387 40.909 20.16 0.00 42.71 2.57
5049 5575 3.376234 TCTGCTGCTGCTGAATTAATCAC 59.624 43.478 20.16 0.00 42.71 3.06
5050 5576 2.096335 TGCTGCTGCTGAATTAATCACG 59.904 45.455 17.00 0.00 40.48 4.35
5051 5577 2.713011 CTGCTGCTGAATTAATCACGC 58.287 47.619 0.00 0.00 33.47 5.34
5052 5578 2.083002 TGCTGCTGAATTAATCACGCA 58.917 42.857 0.00 0.00 38.79 5.24
5053 5579 2.487372 TGCTGCTGAATTAATCACGCAA 59.513 40.909 0.00 0.00 39.79 4.85
5054 5580 3.057666 TGCTGCTGAATTAATCACGCAAA 60.058 39.130 0.00 0.00 39.79 3.68
5055 5581 3.301642 GCTGCTGAATTAATCACGCAAAC 59.698 43.478 0.00 0.94 39.79 2.93
5057 5583 2.845967 GCTGAATTAATCACGCAAACGG 59.154 45.455 0.00 0.00 46.04 4.44
5058 5584 3.425625 GCTGAATTAATCACGCAAACGGA 60.426 43.478 0.00 0.00 46.04 4.69
5059 5585 4.073169 TGAATTAATCACGCAAACGGAC 57.927 40.909 0.00 0.00 46.04 4.79
5060 5586 2.798834 ATTAATCACGCAAACGGACG 57.201 45.000 0.00 0.00 46.04 4.79
5061 5587 0.164217 TTAATCACGCAAACGGACGC 59.836 50.000 0.00 0.00 46.04 5.19
5077 5603 4.479993 GCGGCCTGCATCCTGACT 62.480 66.667 13.61 0.00 45.45 3.41
5078 5604 2.270205 CGGCCTGCATCCTGACTT 59.730 61.111 0.00 0.00 0.00 3.01
5079 5605 2.110967 CGGCCTGCATCCTGACTTG 61.111 63.158 0.00 0.00 0.00 3.16
5080 5606 1.751927 GGCCTGCATCCTGACTTGG 60.752 63.158 0.00 0.00 0.00 3.61
5081 5607 1.300963 GCCTGCATCCTGACTTGGA 59.699 57.895 0.00 0.00 40.82 3.53
5082 5608 0.106819 GCCTGCATCCTGACTTGGAT 60.107 55.000 0.00 0.00 46.91 3.41
5089 5615 0.608130 TCCTGACTTGGATGTGGACG 59.392 55.000 0.00 0.00 0.00 4.79
5090 5616 0.391661 CCTGACTTGGATGTGGACGG 60.392 60.000 0.00 0.00 0.00 4.79
5091 5617 1.003839 TGACTTGGATGTGGACGGC 60.004 57.895 0.00 0.00 0.00 5.68
5092 5618 2.047274 ACTTGGATGTGGACGGCG 60.047 61.111 4.80 4.80 0.00 6.46
5093 5619 2.047274 CTTGGATGTGGACGGCGT 60.047 61.111 14.65 14.65 0.00 5.68
5094 5620 1.216977 CTTGGATGTGGACGGCGTA 59.783 57.895 14.74 0.00 0.00 4.42
5095 5621 0.179084 CTTGGATGTGGACGGCGTAT 60.179 55.000 14.74 1.58 0.00 3.06
5096 5622 1.067974 CTTGGATGTGGACGGCGTATA 59.932 52.381 14.74 1.09 0.00 1.47
5097 5623 1.334160 TGGATGTGGACGGCGTATAT 58.666 50.000 14.74 1.24 0.00 0.86
5098 5624 2.516906 TGGATGTGGACGGCGTATATA 58.483 47.619 14.74 3.40 0.00 0.86
5099 5625 3.093814 TGGATGTGGACGGCGTATATAT 58.906 45.455 14.74 8.82 0.00 0.86
5100 5626 3.119280 TGGATGTGGACGGCGTATATATG 60.119 47.826 14.74 0.00 0.00 1.78
5101 5627 3.444916 GATGTGGACGGCGTATATATGG 58.555 50.000 14.74 0.00 0.00 2.74
5102 5628 1.067425 TGTGGACGGCGTATATATGGC 60.067 52.381 14.74 16.60 34.73 4.40
5103 5629 0.533491 TGGACGGCGTATATATGGCC 59.467 55.000 14.74 17.03 43.42 5.36
5107 5633 3.059603 GGCGTATATATGGCCGGTG 57.940 57.895 15.89 0.00 37.06 4.94
5108 5634 0.533491 GGCGTATATATGGCCGGTGA 59.467 55.000 15.89 0.00 37.06 4.02
5109 5635 1.470979 GGCGTATATATGGCCGGTGAG 60.471 57.143 15.89 0.00 37.06 3.51
5110 5636 1.203994 GCGTATATATGGCCGGTGAGT 59.796 52.381 1.90 0.00 0.00 3.41
5111 5637 2.734492 GCGTATATATGGCCGGTGAGTC 60.734 54.545 1.90 0.00 0.00 3.36
5112 5638 2.490509 CGTATATATGGCCGGTGAGTCA 59.509 50.000 1.90 0.00 0.00 3.41
5113 5639 3.057104 CGTATATATGGCCGGTGAGTCAA 60.057 47.826 1.90 0.00 0.00 3.18
5114 5640 4.381612 CGTATATATGGCCGGTGAGTCAAT 60.382 45.833 1.90 0.00 0.00 2.57
5115 5641 2.260844 ATATGGCCGGTGAGTCAATG 57.739 50.000 1.90 0.00 0.00 2.82
5116 5642 0.180171 TATGGCCGGTGAGTCAATGG 59.820 55.000 1.90 7.41 0.00 3.16
5117 5643 1.561769 ATGGCCGGTGAGTCAATGGA 61.562 55.000 14.54 0.00 0.00 3.41
5118 5644 1.224592 GGCCGGTGAGTCAATGGAT 59.775 57.895 14.54 0.00 0.00 3.41
5119 5645 1.097547 GGCCGGTGAGTCAATGGATG 61.098 60.000 14.54 0.00 0.00 3.51
5120 5646 0.392998 GCCGGTGAGTCAATGGATGT 60.393 55.000 14.54 0.00 0.00 3.06
5121 5647 1.134521 GCCGGTGAGTCAATGGATGTA 60.135 52.381 14.54 0.00 0.00 2.29
5122 5648 2.826428 CCGGTGAGTCAATGGATGTAG 58.174 52.381 6.10 0.00 0.00 2.74
5123 5649 2.205074 CGGTGAGTCAATGGATGTAGC 58.795 52.381 0.00 0.00 0.00 3.58
5124 5650 2.159043 CGGTGAGTCAATGGATGTAGCT 60.159 50.000 0.00 0.00 0.00 3.32
5125 5651 3.068165 CGGTGAGTCAATGGATGTAGCTA 59.932 47.826 0.00 0.00 0.00 3.32
5126 5652 4.626042 GGTGAGTCAATGGATGTAGCTAG 58.374 47.826 0.00 0.00 0.00 3.42
5127 5653 4.054671 GTGAGTCAATGGATGTAGCTAGC 58.945 47.826 6.62 6.62 0.00 3.42
5128 5654 3.963374 TGAGTCAATGGATGTAGCTAGCT 59.037 43.478 23.12 23.12 0.00 3.32
5129 5655 5.010112 GTGAGTCAATGGATGTAGCTAGCTA 59.990 44.000 20.67 20.67 0.00 3.32
5130 5656 5.242615 TGAGTCAATGGATGTAGCTAGCTAG 59.757 44.000 24.78 16.84 0.00 3.42
5131 5657 5.389520 AGTCAATGGATGTAGCTAGCTAGA 58.610 41.667 24.78 23.59 0.00 2.43
5132 5658 5.476599 AGTCAATGGATGTAGCTAGCTAGAG 59.523 44.000 24.78 10.53 0.00 2.43
5133 5659 5.242838 GTCAATGGATGTAGCTAGCTAGAGT 59.757 44.000 24.78 13.25 0.00 3.24
5134 5660 5.242615 TCAATGGATGTAGCTAGCTAGAGTG 59.757 44.000 24.78 15.93 0.00 3.51
5135 5661 2.887783 TGGATGTAGCTAGCTAGAGTGC 59.112 50.000 24.78 17.51 0.00 4.40
5136 5662 2.887783 GGATGTAGCTAGCTAGAGTGCA 59.112 50.000 24.78 18.02 34.99 4.57
5137 5663 3.305064 GGATGTAGCTAGCTAGAGTGCAC 60.305 52.174 24.78 14.10 34.99 4.57
5138 5664 1.671328 TGTAGCTAGCTAGAGTGCACG 59.329 52.381 24.78 0.00 34.99 5.34
5139 5665 0.663688 TAGCTAGCTAGAGTGCACGC 59.336 55.000 25.15 13.22 34.99 5.34
5140 5666 1.139734 GCTAGCTAGAGTGCACGCA 59.860 57.895 25.15 7.83 34.99 5.24
5141 5667 0.869454 GCTAGCTAGAGTGCACGCAG 60.869 60.000 25.15 17.19 34.99 5.18
5143 5669 1.671328 CTAGCTAGAGTGCACGCAGTA 59.329 52.381 22.91 6.38 41.61 2.74
5144 5670 0.453793 AGCTAGAGTGCACGCAGTAG 59.546 55.000 22.91 16.26 41.61 2.57
5145 5671 0.171455 GCTAGAGTGCACGCAGTAGT 59.829 55.000 22.91 3.91 41.61 2.73
5146 5672 1.901538 CTAGAGTGCACGCAGTAGTG 58.098 55.000 22.91 2.24 41.61 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 42 0.597637 CTCGGCAAACTCACAGACGT 60.598 55.000 0.00 0.00 0.00 4.34
67 69 1.551145 CTCTTCGCCGAGAGCTAAAC 58.449 55.000 0.00 0.00 40.39 2.01
94 96 4.062293 CTGGAATTTTCATATACGCCGGA 58.938 43.478 5.05 0.00 0.00 5.14
105 107 4.037446 GTGGTTGCACTACTGGAATTTTCA 59.963 41.667 0.00 0.00 29.40 2.69
137 139 3.711842 CAATCGCGCACACACCGT 61.712 61.111 8.75 0.00 0.00 4.83
139 141 3.027170 CTCCAATCGCGCACACACC 62.027 63.158 8.75 0.00 0.00 4.16
151 153 1.003355 CTGTGACCACCGCTCCAAT 60.003 57.895 0.00 0.00 0.00 3.16
159 161 2.882761 GGTAAAAACCTCTGTGACCACC 59.117 50.000 0.00 0.00 0.00 4.61
164 167 4.237976 TGTTGGGTAAAAACCTCTGTGA 57.762 40.909 0.00 0.00 0.00 3.58
227 230 4.145052 AGATCGACACTATGCCTATGTCA 58.855 43.478 4.65 0.00 42.37 3.58
358 362 6.862608 GGTAACACCCGGTTTTTAAATAACTG 59.137 38.462 0.00 11.82 40.96 3.16
398 412 9.864034 CAAAGCAGGACGTATTTATTATGTTAG 57.136 33.333 0.00 0.00 29.93 2.34
442 469 1.416401 GCGTCCCCTCTCATCCATTTA 59.584 52.381 0.00 0.00 0.00 1.40
570 602 0.036732 GTGCTGGTGTGATGGGAGAA 59.963 55.000 0.00 0.00 0.00 2.87
698 730 6.862469 ATGATCTGGTGATTTGATGGTTTT 57.138 33.333 0.00 0.00 32.19 2.43
732 764 4.555709 TGGTGGTGGGACGTGTGC 62.556 66.667 0.00 0.00 0.00 4.57
734 766 2.766651 ACTGGTGGTGGGACGTGT 60.767 61.111 0.00 0.00 0.00 4.49
735 767 2.030562 GACTGGTGGTGGGACGTG 59.969 66.667 0.00 0.00 0.00 4.49
736 768 1.628238 TTTGACTGGTGGTGGGACGT 61.628 55.000 0.00 0.00 0.00 4.34
737 769 0.250727 ATTTGACTGGTGGTGGGACG 60.251 55.000 0.00 0.00 0.00 4.79
738 770 1.202879 TGATTTGACTGGTGGTGGGAC 60.203 52.381 0.00 0.00 0.00 4.46
739 771 1.144691 TGATTTGACTGGTGGTGGGA 58.855 50.000 0.00 0.00 0.00 4.37
749 781 0.591170 CGTTTGGGCGTGATTTGACT 59.409 50.000 0.00 0.00 0.00 3.41
802 834 2.392821 CTAGCTGCTACTCGCTGATTG 58.607 52.381 5.02 0.00 39.69 2.67
803 835 1.339610 CCTAGCTGCTACTCGCTGATT 59.660 52.381 5.02 0.00 39.69 2.57
805 837 0.394488 ACCTAGCTGCTACTCGCTGA 60.394 55.000 5.02 0.00 39.69 4.26
806 838 1.002251 GTACCTAGCTGCTACTCGCTG 60.002 57.143 5.02 0.00 40.11 5.18
807 839 1.310904 GTACCTAGCTGCTACTCGCT 58.689 55.000 5.02 0.00 40.11 4.93
808 840 0.311477 GGTACCTAGCTGCTACTCGC 59.689 60.000 5.02 0.00 39.77 5.03
809 841 0.587285 CGGTACCTAGCTGCTACTCG 59.413 60.000 10.90 1.62 0.00 4.18
810 842 0.311477 GCGGTACCTAGCTGCTACTC 59.689 60.000 10.90 0.00 0.00 2.59
811 843 1.108132 GGCGGTACCTAGCTGCTACT 61.108 60.000 10.90 0.00 34.51 2.57
812 844 1.363080 GGCGGTACCTAGCTGCTAC 59.637 63.158 10.90 0.00 34.51 3.58
981 1044 1.153449 GCCCGGTTGATCGATCACA 60.153 57.895 27.28 15.48 36.36 3.58
1053 1119 4.194720 GCCATCTGCTGCTGCTGC 62.195 66.667 22.51 22.51 40.48 5.25
1054 1120 3.877357 CGCCATCTGCTGCTGCTG 61.877 66.667 17.00 15.94 40.48 4.41
1055 1121 4.405671 ACGCCATCTGCTGCTGCT 62.406 61.111 17.00 0.00 40.48 4.24
1196 1262 2.200092 GAGAGAGAGGCGGGGGAT 59.800 66.667 0.00 0.00 0.00 3.85
1229 1299 4.950050 AGCTACATACGCTTAGATGCTTT 58.050 39.130 0.00 0.00 32.98 3.51
1234 1304 5.621104 GCTGATGAGCTACATACGCTTAGAT 60.621 44.000 0.00 0.00 42.52 1.98
1366 1437 2.360726 TCGACGGTGAGCAGGCTA 60.361 61.111 0.00 0.00 0.00 3.93
1396 1467 1.975407 GGTCGTGGTCGGGAAGAGA 60.975 63.158 0.00 0.00 37.69 3.10
1598 1669 2.498167 ACAATCAGAAGCTCACCACAC 58.502 47.619 0.00 0.00 0.00 3.82
1599 1670 2.936919 ACAATCAGAAGCTCACCACA 57.063 45.000 0.00 0.00 0.00 4.17
1812 1890 2.198304 CTCCTTCCCACCTTTCCCCG 62.198 65.000 0.00 0.00 0.00 5.73
1903 1981 5.990668 AGAAGAATAGGTAGCGGACATTTT 58.009 37.500 0.00 0.00 0.00 1.82
1908 1986 3.004944 CAGGAGAAGAATAGGTAGCGGAC 59.995 52.174 0.00 0.00 0.00 4.79
1912 1990 3.961408 TCCACAGGAGAAGAATAGGTAGC 59.039 47.826 0.00 0.00 0.00 3.58
2003 2091 1.050204 GAGAGAGAGAGCATGGGCAT 58.950 55.000 0.00 0.00 44.61 4.40
2072 2173 5.009710 CGTAGAGCAGATAGGTTCCATGTAA 59.990 44.000 0.00 0.00 0.00 2.41
2087 2188 0.032130 ACACCACACACGTAGAGCAG 59.968 55.000 0.00 0.00 0.00 4.24
2310 2411 1.754226 GTTGCAGGTTCCAACTTCCAA 59.246 47.619 0.00 0.00 39.47 3.53
2311 2412 1.398692 GTTGCAGGTTCCAACTTCCA 58.601 50.000 0.00 0.00 39.47 3.53
2312 2413 0.673985 GGTTGCAGGTTCCAACTTCC 59.326 55.000 4.53 0.00 41.64 3.46
2313 2414 1.398692 TGGTTGCAGGTTCCAACTTC 58.601 50.000 4.53 0.00 41.64 3.01
2314 2415 1.688197 CATGGTTGCAGGTTCCAACTT 59.312 47.619 6.20 0.00 41.64 2.66
2315 2416 1.331214 CATGGTTGCAGGTTCCAACT 58.669 50.000 6.20 0.00 41.64 3.16
2316 2417 0.318120 CCATGGTTGCAGGTTCCAAC 59.682 55.000 2.57 0.00 41.31 3.77
2708 2810 2.363680 AGAGCGAGAGAGAGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2709 2811 2.362397 GAGAGCGAGAGAGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2710 2812 2.363680 AGAGAGCGAGAGAGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2711 2813 2.362397 GAGAGAGCGAGAGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2712 2814 2.363680 AGAGAGAGCGAGAGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2713 2815 2.362397 GAGAGAGAGCGAGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2714 2816 2.363680 AGAGAGAGAGCGAGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2715 2817 2.362397 GAGAGAGAGAGCGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2716 2818 2.363680 AGAGAGAGAGAGCGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2717 2819 2.362397 GAGAGAGAGAGAGCGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2718 2820 2.363680 AGAGAGAGAGAGAGCGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2719 2821 2.362397 GAGAGAGAGAGAGAGCGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
2720 2822 2.363680 AGAGAGAGAGAGAGAGCGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
2721 2823 2.362397 GAGAGAGAGAGAGAGAGCGAGA 59.638 54.545 0.00 0.00 0.00 4.04
2722 2824 2.363680 AGAGAGAGAGAGAGAGAGCGAG 59.636 54.545 0.00 0.00 0.00 5.03
2723 2825 2.362397 GAGAGAGAGAGAGAGAGAGCGA 59.638 54.545 0.00 0.00 0.00 4.93
2724 2826 2.363680 AGAGAGAGAGAGAGAGAGAGCG 59.636 54.545 0.00 0.00 0.00 5.03
2725 2827 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
2772 2874 4.522405 TCTCTCTCTCTTCCTCAAACAGTG 59.478 45.833 0.00 0.00 0.00 3.66
2773 2875 4.735369 TCTCTCTCTCTTCCTCAAACAGT 58.265 43.478 0.00 0.00 0.00 3.55
2774 2876 5.009631 TCTCTCTCTCTCTTCCTCAAACAG 58.990 45.833 0.00 0.00 0.00 3.16
2775 2877 4.991776 TCTCTCTCTCTCTTCCTCAAACA 58.008 43.478 0.00 0.00 0.00 2.83
2776 2878 5.253330 TCTCTCTCTCTCTCTTCCTCAAAC 58.747 45.833 0.00 0.00 0.00 2.93
2777 2879 5.512942 TCTCTCTCTCTCTCTTCCTCAAA 57.487 43.478 0.00 0.00 0.00 2.69
2778 2880 5.014123 ACTTCTCTCTCTCTCTCTTCCTCAA 59.986 44.000 0.00 0.00 0.00 3.02
2779 2881 4.536090 ACTTCTCTCTCTCTCTCTTCCTCA 59.464 45.833 0.00 0.00 0.00 3.86
2780 2882 5.104259 ACTTCTCTCTCTCTCTCTTCCTC 57.896 47.826 0.00 0.00 0.00 3.71
3060 3185 4.128925 AGTATGTGTAGTGCATGTGAGG 57.871 45.455 0.00 0.00 0.00 3.86
3066 3191 7.448748 TCGATATGTAGTATGTGTAGTGCAT 57.551 36.000 0.00 0.00 39.16 3.96
3079 3204 5.555966 TCAGAGCAGAGATCGATATGTAGT 58.444 41.667 0.00 0.00 0.00 2.73
3083 3208 5.771469 AGTTTCAGAGCAGAGATCGATATG 58.229 41.667 0.00 0.00 0.00 1.78
3221 3350 4.224433 CAGCAGCAACAACAAGAACATAG 58.776 43.478 0.00 0.00 0.00 2.23
3477 3607 7.272037 CTTGAAGTTAAGCTAGTCCCAAAAA 57.728 36.000 0.00 0.00 0.00 1.94
3670 4145 7.013942 ACCAAGTCTAAATAAAAGTGGGTCAAC 59.986 37.037 0.00 0.00 0.00 3.18
3782 4283 8.497554 ACTACATAATTTTTGTTGCATGCTTTG 58.502 29.630 20.33 3.16 0.00 2.77
3807 4308 9.896263 TTTTATCCACGTCTAACCAATTTAAAC 57.104 29.630 0.00 0.00 0.00 2.01
3814 4315 6.149807 GGACAATTTTATCCACGTCTAACCAA 59.850 38.462 0.00 0.00 34.87 3.67
3826 4327 5.163416 CCCATGACCTTGGACAATTTTATCC 60.163 44.000 0.00 0.00 39.25 2.59
3913 4414 4.389374 GTCCTGAGAATTTGGACACAAGA 58.611 43.478 12.75 0.00 46.79 3.02
3939 4440 6.541111 ACTCTATTTAAAAATCGATCGGGC 57.459 37.500 16.41 0.00 0.00 6.13
3942 4443 9.924408 CGATGTACTCTATTTAAAAATCGATCG 57.076 33.333 9.36 9.36 37.23 3.69
4012 4530 3.568430 GGGTTAGCCGAAAATGGATAAGG 59.432 47.826 0.00 0.00 40.32 2.69
4034 4552 4.690280 GCCACAAAGGGTTGACATTTTATG 59.310 41.667 0.00 0.00 38.20 1.90
4035 4553 4.893608 GCCACAAAGGGTTGACATTTTAT 58.106 39.130 0.00 0.00 38.20 1.40
4036 4554 4.329462 GCCACAAAGGGTTGACATTTTA 57.671 40.909 0.00 0.00 38.20 1.52
4037 4555 3.192541 GCCACAAAGGGTTGACATTTT 57.807 42.857 0.00 0.00 38.20 1.82
4110 4628 1.582610 CCATGTTGGCCGCGTAAAGT 61.583 55.000 4.92 0.00 0.00 2.66
4171 4689 1.153429 AAGGAGGCGACGGCAATAC 60.153 57.895 24.23 4.31 42.47 1.89
4172 4690 1.153449 CAAGGAGGCGACGGCAATA 60.153 57.895 24.23 0.00 42.47 1.90
4173 4691 2.436646 CAAGGAGGCGACGGCAAT 60.437 61.111 24.23 3.09 42.47 3.56
4179 4697 0.101579 GAGCTAGTCAAGGAGGCGAC 59.898 60.000 0.00 0.00 0.00 5.19
4406 4930 6.147821 AGTGTCTTGATGATTAAGTGGAAACG 59.852 38.462 0.00 0.00 0.00 3.60
4418 4942 4.758674 CAGAAACCACAGTGTCTTGATGAT 59.241 41.667 0.00 0.00 37.26 2.45
4419 4943 4.129380 CAGAAACCACAGTGTCTTGATGA 58.871 43.478 0.00 0.00 37.26 2.92
4420 4944 3.879295 ACAGAAACCACAGTGTCTTGATG 59.121 43.478 0.00 0.00 37.26 3.07
4421 4945 4.156455 ACAGAAACCACAGTGTCTTGAT 57.844 40.909 0.00 0.00 37.26 2.57
4422 4946 3.627395 ACAGAAACCACAGTGTCTTGA 57.373 42.857 0.00 0.00 37.26 3.02
4423 4947 6.201517 CAATTACAGAAACCACAGTGTCTTG 58.798 40.000 0.00 0.00 37.26 3.02
4424 4948 5.299279 CCAATTACAGAAACCACAGTGTCTT 59.701 40.000 0.00 0.00 37.26 3.01
4425 4949 4.821805 CCAATTACAGAAACCACAGTGTCT 59.178 41.667 0.00 0.00 41.61 3.41
4426 4950 4.819630 TCCAATTACAGAAACCACAGTGTC 59.180 41.667 0.00 0.00 0.00 3.67
4427 4951 4.787551 TCCAATTACAGAAACCACAGTGT 58.212 39.130 0.00 0.00 0.00 3.55
4428 4952 5.766150 TTCCAATTACAGAAACCACAGTG 57.234 39.130 0.00 0.00 0.00 3.66
4429 4953 6.976934 ATTTCCAATTACAGAAACCACAGT 57.023 33.333 0.96 0.00 34.97 3.55
4430 4954 9.757227 TTTAATTTCCAATTACAGAAACCACAG 57.243 29.630 0.96 0.00 34.97 3.66
4431 4955 9.757227 CTTTAATTTCCAATTACAGAAACCACA 57.243 29.630 0.96 0.00 34.97 4.17
4432 4956 9.974980 TCTTTAATTTCCAATTACAGAAACCAC 57.025 29.630 3.61 0.00 34.97 4.16
4434 4958 9.639601 CCTCTTTAATTTCCAATTACAGAAACC 57.360 33.333 6.57 0.00 34.97 3.27
4435 4959 9.639601 CCCTCTTTAATTTCCAATTACAGAAAC 57.360 33.333 6.57 0.00 34.97 2.78
4436 4960 9.374711 ACCCTCTTTAATTTCCAATTACAGAAA 57.625 29.630 6.57 1.35 36.48 2.52
4437 4961 8.802267 CACCCTCTTTAATTTCCAATTACAGAA 58.198 33.333 6.57 0.00 0.00 3.02
4438 4962 7.093945 GCACCCTCTTTAATTTCCAATTACAGA 60.094 37.037 5.43 5.43 0.00 3.41
4439 4963 7.035612 GCACCCTCTTTAATTTCCAATTACAG 58.964 38.462 0.00 0.00 0.00 2.74
4440 4964 6.723977 AGCACCCTCTTTAATTTCCAATTACA 59.276 34.615 0.00 0.00 0.00 2.41
4441 4965 7.035612 CAGCACCCTCTTTAATTTCCAATTAC 58.964 38.462 0.00 0.00 0.00 1.89
4442 4966 6.723977 ACAGCACCCTCTTTAATTTCCAATTA 59.276 34.615 0.00 0.00 0.00 1.40
4443 4967 5.543790 ACAGCACCCTCTTTAATTTCCAATT 59.456 36.000 0.00 0.00 0.00 2.32
4444 4968 5.086621 ACAGCACCCTCTTTAATTTCCAAT 58.913 37.500 0.00 0.00 0.00 3.16
4445 4969 4.479158 ACAGCACCCTCTTTAATTTCCAA 58.521 39.130 0.00 0.00 0.00 3.53
4446 4970 4.079253 GACAGCACCCTCTTTAATTTCCA 58.921 43.478 0.00 0.00 0.00 3.53
4447 4971 4.336280 AGACAGCACCCTCTTTAATTTCC 58.664 43.478 0.00 0.00 0.00 3.13
4448 4972 5.241728 ACAAGACAGCACCCTCTTTAATTTC 59.758 40.000 0.00 0.00 0.00 2.17
4449 4973 5.140454 ACAAGACAGCACCCTCTTTAATTT 58.860 37.500 0.00 0.00 0.00 1.82
4450 4974 4.729868 ACAAGACAGCACCCTCTTTAATT 58.270 39.130 0.00 0.00 0.00 1.40
4451 4975 4.373156 ACAAGACAGCACCCTCTTTAAT 57.627 40.909 0.00 0.00 0.00 1.40
4452 4976 3.857157 ACAAGACAGCACCCTCTTTAA 57.143 42.857 0.00 0.00 0.00 1.52
4453 4977 3.135712 TGAACAAGACAGCACCCTCTTTA 59.864 43.478 0.00 0.00 0.00 1.85
4454 4978 2.092429 TGAACAAGACAGCACCCTCTTT 60.092 45.455 0.00 0.00 0.00 2.52
4455 4979 1.490490 TGAACAAGACAGCACCCTCTT 59.510 47.619 0.00 0.00 0.00 2.85
4456 4980 1.131638 TGAACAAGACAGCACCCTCT 58.868 50.000 0.00 0.00 0.00 3.69
4457 4981 1.967319 TTGAACAAGACAGCACCCTC 58.033 50.000 0.00 0.00 0.00 4.30
4458 4982 2.435372 TTTGAACAAGACAGCACCCT 57.565 45.000 0.00 0.00 0.00 4.34
4459 4983 3.518634 TTTTTGAACAAGACAGCACCC 57.481 42.857 0.00 0.00 0.00 4.61
4528 5052 3.830178 ACCACTGCACCGCATATATACTA 59.170 43.478 0.00 0.00 38.13 1.82
4529 5053 2.632996 ACCACTGCACCGCATATATACT 59.367 45.455 0.00 0.00 38.13 2.12
4530 5054 2.736721 CACCACTGCACCGCATATATAC 59.263 50.000 0.00 0.00 38.13 1.47
4533 5057 0.179059 CCACCACTGCACCGCATATA 60.179 55.000 0.00 0.00 38.13 0.86
4534 5058 1.451927 CCACCACTGCACCGCATAT 60.452 57.895 0.00 0.00 38.13 1.78
4664 5188 2.476320 GCGGAGGGAATGAGCTTGC 61.476 63.158 0.00 0.00 0.00 4.01
4692 5216 2.037367 TGCTAGAGACCGGCCTGT 59.963 61.111 0.00 0.00 0.00 4.00
4721 5245 2.731571 GGAGCAGCCATACGTCCCA 61.732 63.158 0.00 0.00 36.34 4.37
4723 5247 1.068250 GAGGAGCAGCCATACGTCC 59.932 63.158 0.00 0.00 40.02 4.79
4724 5248 0.390860 ATGAGGAGCAGCCATACGTC 59.609 55.000 0.00 0.00 40.02 4.34
4725 5249 0.390860 GATGAGGAGCAGCCATACGT 59.609 55.000 0.00 0.00 40.02 3.57
4726 5250 0.678395 AGATGAGGAGCAGCCATACG 59.322 55.000 0.00 0.00 40.02 3.06
4727 5251 2.926778 AAGATGAGGAGCAGCCATAC 57.073 50.000 0.00 0.00 40.02 2.39
4728 5252 3.548770 CAAAAGATGAGGAGCAGCCATA 58.451 45.455 0.00 0.00 40.02 2.74
4782 5306 1.413077 GAGAGGTGTATGTGTAGGGGC 59.587 57.143 0.00 0.00 0.00 5.80
4807 5332 3.018856 CCCGGCTACATATATACACCGA 58.981 50.000 14.02 0.00 41.61 4.69
4810 5335 4.142227 CCAGTCCCGGCTACATATATACAC 60.142 50.000 0.00 0.00 0.00 2.90
4842 5368 3.009723 AGTGGAGAATTAATGTGCACGG 58.990 45.455 13.13 0.00 37.58 4.94
4843 5369 3.684305 TCAGTGGAGAATTAATGTGCACG 59.316 43.478 13.13 10.34 37.58 5.34
4844 5370 4.437930 GCTCAGTGGAGAATTAATGTGCAC 60.438 45.833 10.75 10.75 44.26 4.57
4845 5371 3.691118 GCTCAGTGGAGAATTAATGTGCA 59.309 43.478 0.00 0.00 44.26 4.57
4846 5372 3.944015 AGCTCAGTGGAGAATTAATGTGC 59.056 43.478 0.00 0.00 44.26 4.57
4847 5373 6.373774 AGAAAGCTCAGTGGAGAATTAATGTG 59.626 38.462 0.00 0.00 44.26 3.21
4848 5374 6.479884 AGAAAGCTCAGTGGAGAATTAATGT 58.520 36.000 0.00 0.00 44.26 2.71
4849 5375 6.038050 GGAGAAAGCTCAGTGGAGAATTAATG 59.962 42.308 0.00 0.00 44.26 1.90
4850 5376 6.118852 GGAGAAAGCTCAGTGGAGAATTAAT 58.881 40.000 0.00 0.00 44.26 1.40
4851 5377 5.491982 GGAGAAAGCTCAGTGGAGAATTAA 58.508 41.667 0.00 0.00 44.26 1.40
4852 5378 4.080863 GGGAGAAAGCTCAGTGGAGAATTA 60.081 45.833 0.00 0.00 44.26 1.40
4853 5379 3.308046 GGGAGAAAGCTCAGTGGAGAATT 60.308 47.826 0.00 0.00 44.26 2.17
4854 5380 2.238395 GGGAGAAAGCTCAGTGGAGAAT 59.762 50.000 0.00 0.00 44.26 2.40
4855 5381 1.625818 GGGAGAAAGCTCAGTGGAGAA 59.374 52.381 0.00 0.00 44.26 2.87
4856 5382 1.270907 GGGAGAAAGCTCAGTGGAGA 58.729 55.000 0.00 0.00 44.26 3.71
4857 5383 0.108424 CGGGAGAAAGCTCAGTGGAG 60.108 60.000 0.00 0.00 43.14 3.86
4858 5384 1.975327 CGGGAGAAAGCTCAGTGGA 59.025 57.895 0.00 0.00 43.14 4.02
4859 5385 1.743252 GCGGGAGAAAGCTCAGTGG 60.743 63.158 0.00 0.00 43.14 4.00
4860 5386 1.018226 CAGCGGGAGAAAGCTCAGTG 61.018 60.000 0.00 0.00 42.52 3.66
4861 5387 1.294780 CAGCGGGAGAAAGCTCAGT 59.705 57.895 0.00 0.00 42.52 3.41
4862 5388 1.449246 CCAGCGGGAGAAAGCTCAG 60.449 63.158 0.00 0.00 42.52 3.35
4863 5389 1.913262 TCCAGCGGGAGAAAGCTCA 60.913 57.895 0.00 0.00 42.52 4.26
4864 5390 2.982130 TCCAGCGGGAGAAAGCTC 59.018 61.111 0.00 0.00 42.52 4.09
4876 5402 3.680490 AGAAACTTAAGGAAGCTCCAGC 58.320 45.455 7.53 0.00 39.61 4.85
4877 5403 4.899502 TGAGAAACTTAAGGAAGCTCCAG 58.100 43.478 7.53 0.00 39.61 3.86
4878 5404 4.974645 TGAGAAACTTAAGGAAGCTCCA 57.025 40.909 7.53 0.00 39.61 3.86
4879 5405 5.063880 TGTTGAGAAACTTAAGGAAGCTCC 58.936 41.667 7.53 0.00 35.97 4.70
4880 5406 6.619801 TTGTTGAGAAACTTAAGGAAGCTC 57.380 37.500 7.53 8.37 35.97 4.09
4881 5407 8.691661 TTATTGTTGAGAAACTTAAGGAAGCT 57.308 30.769 7.53 0.00 35.97 3.74
4882 5408 9.744468 TTTTATTGTTGAGAAACTTAAGGAAGC 57.256 29.630 7.53 0.00 35.97 3.86
4906 5432 4.016444 TGCCTCTCCAGCGAAATATTTTT 58.984 39.130 1.43 0.00 0.00 1.94
4907 5433 3.620488 TGCCTCTCCAGCGAAATATTTT 58.380 40.909 1.43 0.00 0.00 1.82
4908 5434 3.281727 TGCCTCTCCAGCGAAATATTT 57.718 42.857 0.00 0.00 0.00 1.40
4909 5435 3.281727 TTGCCTCTCCAGCGAAATATT 57.718 42.857 0.00 0.00 0.00 1.28
4910 5436 3.281727 TTTGCCTCTCCAGCGAAATAT 57.718 42.857 0.00 0.00 30.62 1.28
4911 5437 2.779755 TTTGCCTCTCCAGCGAAATA 57.220 45.000 0.00 0.00 30.62 1.40
4912 5438 1.815003 CTTTTGCCTCTCCAGCGAAAT 59.185 47.619 0.00 0.00 41.55 2.17
4913 5439 1.202758 TCTTTTGCCTCTCCAGCGAAA 60.203 47.619 0.00 0.00 40.48 3.46
4914 5440 0.396435 TCTTTTGCCTCTCCAGCGAA 59.604 50.000 0.00 0.00 0.00 4.70
4915 5441 0.615331 ATCTTTTGCCTCTCCAGCGA 59.385 50.000 0.00 0.00 0.00 4.93
4916 5442 0.731417 CATCTTTTGCCTCTCCAGCG 59.269 55.000 0.00 0.00 0.00 5.18
4917 5443 1.831580 ACATCTTTTGCCTCTCCAGC 58.168 50.000 0.00 0.00 0.00 4.85
4918 5444 5.964958 TTTAACATCTTTTGCCTCTCCAG 57.035 39.130 0.00 0.00 0.00 3.86
4919 5445 6.721208 AGAATTTAACATCTTTTGCCTCTCCA 59.279 34.615 0.00 0.00 0.00 3.86
4920 5446 7.163001 AGAATTTAACATCTTTTGCCTCTCC 57.837 36.000 0.00 0.00 0.00 3.71
4921 5447 7.543520 CCAAGAATTTAACATCTTTTGCCTCTC 59.456 37.037 0.28 0.00 33.73 3.20
4922 5448 7.381323 CCAAGAATTTAACATCTTTTGCCTCT 58.619 34.615 0.28 0.00 33.73 3.69
4923 5449 6.591448 CCCAAGAATTTAACATCTTTTGCCTC 59.409 38.462 0.28 0.00 33.73 4.70
4924 5450 6.466812 CCCAAGAATTTAACATCTTTTGCCT 58.533 36.000 0.28 0.00 33.73 4.75
4925 5451 5.643348 CCCCAAGAATTTAACATCTTTTGCC 59.357 40.000 0.28 0.00 33.73 4.52
4926 5452 6.230472 ACCCCAAGAATTTAACATCTTTTGC 58.770 36.000 0.28 0.00 33.73 3.68
4927 5453 7.441017 TGACCCCAAGAATTTAACATCTTTTG 58.559 34.615 0.28 0.00 33.73 2.44
4928 5454 7.610580 TGACCCCAAGAATTTAACATCTTTT 57.389 32.000 0.28 0.00 33.73 2.27
4929 5455 7.610580 TTGACCCCAAGAATTTAACATCTTT 57.389 32.000 0.28 0.00 33.73 2.52
4930 5456 7.797121 ATTGACCCCAAGAATTTAACATCTT 57.203 32.000 0.00 0.00 36.35 2.40
4931 5457 7.310609 CCAATTGACCCCAAGAATTTAACATCT 60.311 37.037 7.12 0.00 35.48 2.90
4932 5458 6.818142 CCAATTGACCCCAAGAATTTAACATC 59.182 38.462 7.12 0.00 35.48 3.06
4933 5459 6.500049 TCCAATTGACCCCAAGAATTTAACAT 59.500 34.615 7.12 0.00 35.48 2.71
4934 5460 5.841237 TCCAATTGACCCCAAGAATTTAACA 59.159 36.000 7.12 0.00 35.48 2.41
4935 5461 6.014584 AGTCCAATTGACCCCAAGAATTTAAC 60.015 38.462 7.12 0.00 45.68 2.01
4936 5462 6.081356 AGTCCAATTGACCCCAAGAATTTAA 58.919 36.000 7.12 0.00 45.68 1.52
4937 5463 5.650283 AGTCCAATTGACCCCAAGAATTTA 58.350 37.500 7.12 0.00 45.68 1.40
4938 5464 4.492646 AGTCCAATTGACCCCAAGAATTT 58.507 39.130 7.12 0.00 45.68 1.82
4939 5465 4.132122 AGTCCAATTGACCCCAAGAATT 57.868 40.909 7.12 0.00 45.68 2.17
4940 5466 3.833559 AGTCCAATTGACCCCAAGAAT 57.166 42.857 7.12 0.00 45.68 2.40
4941 5467 4.733077 TTAGTCCAATTGACCCCAAGAA 57.267 40.909 7.12 0.00 45.68 2.52
4942 5468 4.946160 ATTAGTCCAATTGACCCCAAGA 57.054 40.909 7.12 0.00 45.68 3.02
4943 5469 5.264395 AGAATTAGTCCAATTGACCCCAAG 58.736 41.667 7.12 0.00 45.68 3.61
4944 5470 5.269554 AGAATTAGTCCAATTGACCCCAA 57.730 39.130 7.12 0.00 45.68 4.12
4945 5471 4.946160 AGAATTAGTCCAATTGACCCCA 57.054 40.909 7.12 0.00 45.68 4.96
4946 5472 4.402474 CCAAGAATTAGTCCAATTGACCCC 59.598 45.833 7.12 0.00 45.68 4.95
4947 5473 5.261216 TCCAAGAATTAGTCCAATTGACCC 58.739 41.667 7.12 0.00 45.68 4.46
4948 5474 6.681368 GCATCCAAGAATTAGTCCAATTGACC 60.681 42.308 7.12 0.00 45.68 4.02
4949 5475 6.268566 GCATCCAAGAATTAGTCCAATTGAC 58.731 40.000 7.12 3.53 44.82 3.18
4950 5476 5.066375 CGCATCCAAGAATTAGTCCAATTGA 59.934 40.000 7.12 0.00 36.96 2.57
4951 5477 5.066375 TCGCATCCAAGAATTAGTCCAATTG 59.934 40.000 0.00 0.00 36.96 2.32
4952 5478 5.066505 GTCGCATCCAAGAATTAGTCCAATT 59.933 40.000 0.00 0.00 39.63 2.32
4953 5479 4.576463 GTCGCATCCAAGAATTAGTCCAAT 59.424 41.667 0.00 0.00 0.00 3.16
4954 5480 3.938963 GTCGCATCCAAGAATTAGTCCAA 59.061 43.478 0.00 0.00 0.00 3.53
4955 5481 3.531538 GTCGCATCCAAGAATTAGTCCA 58.468 45.455 0.00 0.00 0.00 4.02
4956 5482 2.540101 CGTCGCATCCAAGAATTAGTCC 59.460 50.000 0.00 0.00 0.00 3.85
4957 5483 3.444916 TCGTCGCATCCAAGAATTAGTC 58.555 45.455 0.00 0.00 0.00 2.59
4958 5484 3.520290 TCGTCGCATCCAAGAATTAGT 57.480 42.857 0.00 0.00 0.00 2.24
4959 5485 3.363378 GCATCGTCGCATCCAAGAATTAG 60.363 47.826 0.00 0.00 0.00 1.73
4960 5486 2.543848 GCATCGTCGCATCCAAGAATTA 59.456 45.455 0.00 0.00 0.00 1.40
4961 5487 1.331756 GCATCGTCGCATCCAAGAATT 59.668 47.619 0.00 0.00 0.00 2.17
4962 5488 0.940126 GCATCGTCGCATCCAAGAAT 59.060 50.000 0.00 0.00 0.00 2.40
4963 5489 0.390998 TGCATCGTCGCATCCAAGAA 60.391 50.000 0.00 0.00 36.86 2.52
4964 5490 0.807275 CTGCATCGTCGCATCCAAGA 60.807 55.000 2.12 0.00 42.06 3.02
4965 5491 1.640069 CTGCATCGTCGCATCCAAG 59.360 57.895 2.12 0.00 42.06 3.61
4966 5492 1.815003 CCTGCATCGTCGCATCCAA 60.815 57.895 2.12 0.00 42.06 3.53
4967 5493 2.202919 CCTGCATCGTCGCATCCA 60.203 61.111 2.12 0.00 42.06 3.41
4968 5494 3.643978 GCCTGCATCGTCGCATCC 61.644 66.667 2.12 0.00 42.06 3.51
4969 5495 3.993234 CGCCTGCATCGTCGCATC 61.993 66.667 2.12 0.00 42.06 3.91
4986 5512 3.718210 GACAGATGCGGACGGGTCC 62.718 68.421 7.82 7.82 46.18 4.46
4987 5513 2.202756 GACAGATGCGGACGGGTC 60.203 66.667 0.00 0.00 0.00 4.46
4988 5514 3.771160 GGACAGATGCGGACGGGT 61.771 66.667 0.00 0.00 0.00 5.28
4989 5515 3.770040 TGGACAGATGCGGACGGG 61.770 66.667 0.00 0.00 0.00 5.28
4990 5516 2.509336 GTGGACAGATGCGGACGG 60.509 66.667 0.00 0.00 0.00 4.79
4991 5517 2.094659 GTGTGGACAGATGCGGACG 61.095 63.158 0.00 0.00 0.00 4.79
4992 5518 2.094659 CGTGTGGACAGATGCGGAC 61.095 63.158 0.00 0.00 0.00 4.79
4993 5519 1.245376 TACGTGTGGACAGATGCGGA 61.245 55.000 0.00 0.00 0.00 5.54
4994 5520 1.076533 GTACGTGTGGACAGATGCGG 61.077 60.000 0.00 0.00 0.00 5.69
4995 5521 1.403225 CGTACGTGTGGACAGATGCG 61.403 60.000 7.22 0.00 0.00 4.73
4996 5522 1.076533 CCGTACGTGTGGACAGATGC 61.077 60.000 15.21 0.00 0.00 3.91
4997 5523 0.524414 TCCGTACGTGTGGACAGATG 59.476 55.000 15.21 0.00 0.00 2.90
4998 5524 0.809385 CTCCGTACGTGTGGACAGAT 59.191 55.000 15.21 0.00 0.00 2.90
4999 5525 0.250424 TCTCCGTACGTGTGGACAGA 60.250 55.000 15.21 0.40 0.00 3.41
5000 5526 0.809385 ATCTCCGTACGTGTGGACAG 59.191 55.000 15.21 0.00 0.00 3.51
5001 5527 0.524414 CATCTCCGTACGTGTGGACA 59.476 55.000 15.21 0.00 0.00 4.02
5002 5528 0.801067 GCATCTCCGTACGTGTGGAC 60.801 60.000 15.21 0.00 0.00 4.02
5003 5529 1.245376 TGCATCTCCGTACGTGTGGA 61.245 55.000 15.21 9.84 0.00 4.02
5004 5530 1.076533 GTGCATCTCCGTACGTGTGG 61.077 60.000 15.21 0.00 0.00 4.17
5005 5531 0.109272 AGTGCATCTCCGTACGTGTG 60.109 55.000 15.21 8.12 0.00 3.82
5006 5532 1.456296 TAGTGCATCTCCGTACGTGT 58.544 50.000 15.21 0.00 0.00 4.49
5007 5533 2.554806 TTAGTGCATCTCCGTACGTG 57.445 50.000 15.21 6.88 0.00 4.49
5008 5534 2.950309 AGATTAGTGCATCTCCGTACGT 59.050 45.455 15.21 0.00 0.00 3.57
5009 5535 3.300857 CAGATTAGTGCATCTCCGTACG 58.699 50.000 8.69 8.69 30.50 3.67
5010 5536 3.053455 GCAGATTAGTGCATCTCCGTAC 58.947 50.000 0.00 0.00 43.41 3.67
5011 5537 2.959030 AGCAGATTAGTGCATCTCCGTA 59.041 45.455 0.00 0.00 46.60 4.02
5012 5538 1.759445 AGCAGATTAGTGCATCTCCGT 59.241 47.619 0.00 0.00 46.60 4.69
5013 5539 2.133553 CAGCAGATTAGTGCATCTCCG 58.866 52.381 0.00 0.00 46.60 4.63
5014 5540 1.872313 GCAGCAGATTAGTGCATCTCC 59.128 52.381 0.00 0.00 46.60 3.71
5015 5541 2.544686 CAGCAGCAGATTAGTGCATCTC 59.455 50.000 0.00 0.00 46.60 2.75
5016 5542 2.562635 CAGCAGCAGATTAGTGCATCT 58.437 47.619 0.00 0.00 46.60 2.90
5017 5543 1.002684 GCAGCAGCAGATTAGTGCATC 60.003 52.381 0.00 0.00 46.60 3.91
5018 5544 1.022735 GCAGCAGCAGATTAGTGCAT 58.977 50.000 0.00 0.00 46.60 3.96
5019 5545 0.035725 AGCAGCAGCAGATTAGTGCA 60.036 50.000 3.17 0.00 46.60 4.57
5020 5546 0.377554 CAGCAGCAGCAGATTAGTGC 59.622 55.000 3.17 0.00 45.49 4.40
5021 5547 2.019948 TCAGCAGCAGCAGATTAGTG 57.980 50.000 3.17 0.00 45.49 2.74
5022 5548 2.775911 TTCAGCAGCAGCAGATTAGT 57.224 45.000 3.17 0.00 45.49 2.24
5023 5549 5.746307 TTAATTCAGCAGCAGCAGATTAG 57.254 39.130 3.17 0.00 45.49 1.73
5024 5550 5.824097 TGATTAATTCAGCAGCAGCAGATTA 59.176 36.000 3.17 2.16 45.49 1.75
5025 5551 4.643334 TGATTAATTCAGCAGCAGCAGATT 59.357 37.500 3.17 3.11 45.49 2.40
5026 5552 4.036498 GTGATTAATTCAGCAGCAGCAGAT 59.964 41.667 3.17 0.00 45.49 2.90
5027 5553 3.376234 GTGATTAATTCAGCAGCAGCAGA 59.624 43.478 3.17 0.00 45.49 4.26
5028 5554 3.692576 GTGATTAATTCAGCAGCAGCAG 58.307 45.455 3.17 0.00 45.49 4.24
5029 5555 2.096335 CGTGATTAATTCAGCAGCAGCA 59.904 45.455 3.17 0.00 45.49 4.41
5030 5556 2.713011 CGTGATTAATTCAGCAGCAGC 58.287 47.619 0.00 0.00 42.56 5.25
5031 5557 2.096335 TGCGTGATTAATTCAGCAGCAG 59.904 45.455 0.00 0.00 36.28 4.24
5032 5558 2.083002 TGCGTGATTAATTCAGCAGCA 58.917 42.857 0.00 7.86 37.79 4.41
5033 5559 2.830772 TGCGTGATTAATTCAGCAGC 57.169 45.000 8.08 0.00 35.19 5.25
5034 5560 3.539563 CGTTTGCGTGATTAATTCAGCAG 59.460 43.478 10.86 0.00 38.68 4.24
5035 5561 3.487536 CGTTTGCGTGATTAATTCAGCA 58.512 40.909 8.08 8.08 36.99 4.41
5036 5562 2.845967 CCGTTTGCGTGATTAATTCAGC 59.154 45.455 0.00 0.00 34.17 4.26
5037 5563 4.088648 GTCCGTTTGCGTGATTAATTCAG 58.911 43.478 0.00 0.00 34.17 3.02
5038 5564 3.423776 CGTCCGTTTGCGTGATTAATTCA 60.424 43.478 0.00 0.00 36.15 2.57
5039 5565 3.088552 CGTCCGTTTGCGTGATTAATTC 58.911 45.455 0.00 0.00 36.15 2.17
5040 5566 2.726681 GCGTCCGTTTGCGTGATTAATT 60.727 45.455 0.00 0.00 36.15 1.40
5041 5567 1.201987 GCGTCCGTTTGCGTGATTAAT 60.202 47.619 0.00 0.00 36.15 1.40
5042 5568 0.164217 GCGTCCGTTTGCGTGATTAA 59.836 50.000 0.00 0.00 36.15 1.40
5043 5569 1.782807 GCGTCCGTTTGCGTGATTA 59.217 52.632 0.00 0.00 36.15 1.75
5044 5570 2.554272 GCGTCCGTTTGCGTGATT 59.446 55.556 0.00 0.00 36.15 2.57
5060 5586 3.984193 AAGTCAGGATGCAGGCCGC 62.984 63.158 11.92 11.92 42.89 6.53
5061 5587 2.110967 CAAGTCAGGATGCAGGCCG 61.111 63.158 0.00 0.00 34.76 6.13
5062 5588 1.751927 CCAAGTCAGGATGCAGGCC 60.752 63.158 0.00 0.00 34.76 5.19
5063 5589 0.106819 ATCCAAGTCAGGATGCAGGC 60.107 55.000 0.00 0.00 46.47 4.85
5070 5596 0.608130 CGTCCACATCCAAGTCAGGA 59.392 55.000 0.00 0.00 43.01 3.86
5071 5597 0.391661 CCGTCCACATCCAAGTCAGG 60.392 60.000 0.00 0.00 0.00 3.86
5072 5598 1.021390 GCCGTCCACATCCAAGTCAG 61.021 60.000 0.00 0.00 0.00 3.51
5073 5599 1.003839 GCCGTCCACATCCAAGTCA 60.004 57.895 0.00 0.00 0.00 3.41
5074 5600 2.100631 CGCCGTCCACATCCAAGTC 61.101 63.158 0.00 0.00 0.00 3.01
5075 5601 1.537814 TACGCCGTCCACATCCAAGT 61.538 55.000 0.00 0.00 0.00 3.16
5076 5602 0.179084 ATACGCCGTCCACATCCAAG 60.179 55.000 0.00 0.00 0.00 3.61
5077 5603 1.112950 TATACGCCGTCCACATCCAA 58.887 50.000 0.00 0.00 0.00 3.53
5078 5604 1.334160 ATATACGCCGTCCACATCCA 58.666 50.000 0.00 0.00 0.00 3.41
5079 5605 3.444916 CATATATACGCCGTCCACATCC 58.555 50.000 0.00 0.00 0.00 3.51
5080 5606 3.444916 CCATATATACGCCGTCCACATC 58.555 50.000 0.00 0.00 0.00 3.06
5081 5607 2.418197 GCCATATATACGCCGTCCACAT 60.418 50.000 0.00 0.00 0.00 3.21
5082 5608 1.067425 GCCATATATACGCCGTCCACA 60.067 52.381 0.00 0.00 0.00 4.17
5083 5609 1.636988 GCCATATATACGCCGTCCAC 58.363 55.000 0.00 0.00 0.00 4.02
5084 5610 0.533491 GGCCATATATACGCCGTCCA 59.467 55.000 0.00 0.00 31.92 4.02
5085 5611 3.357504 GGCCATATATACGCCGTCC 57.642 57.895 0.00 0.00 31.92 4.79
5089 5615 0.533491 TCACCGGCCATATATACGCC 59.467 55.000 0.00 11.22 39.41 5.68
5090 5616 1.203994 ACTCACCGGCCATATATACGC 59.796 52.381 0.00 0.00 0.00 4.42
5091 5617 2.490509 TGACTCACCGGCCATATATACG 59.509 50.000 0.00 0.00 0.00 3.06
5092 5618 4.530710 TTGACTCACCGGCCATATATAC 57.469 45.455 0.00 0.00 0.00 1.47
5093 5619 4.081142 CCATTGACTCACCGGCCATATATA 60.081 45.833 0.00 0.00 0.00 0.86
5094 5620 3.307691 CCATTGACTCACCGGCCATATAT 60.308 47.826 0.00 0.00 0.00 0.86
5095 5621 2.038426 CCATTGACTCACCGGCCATATA 59.962 50.000 0.00 0.00 0.00 0.86
5096 5622 1.202806 CCATTGACTCACCGGCCATAT 60.203 52.381 0.00 0.00 0.00 1.78
5097 5623 0.180171 CCATTGACTCACCGGCCATA 59.820 55.000 0.00 0.00 0.00 2.74
5098 5624 1.077501 CCATTGACTCACCGGCCAT 60.078 57.895 0.00 0.00 0.00 4.40
5099 5625 1.561769 ATCCATTGACTCACCGGCCA 61.562 55.000 0.00 0.00 0.00 5.36
5100 5626 1.097547 CATCCATTGACTCACCGGCC 61.098 60.000 0.00 0.00 0.00 6.13
5101 5627 0.392998 ACATCCATTGACTCACCGGC 60.393 55.000 0.00 0.00 0.00 6.13
5102 5628 2.826428 CTACATCCATTGACTCACCGG 58.174 52.381 0.00 0.00 0.00 5.28
5103 5629 2.159043 AGCTACATCCATTGACTCACCG 60.159 50.000 0.00 0.00 0.00 4.94
5104 5630 3.550437 AGCTACATCCATTGACTCACC 57.450 47.619 0.00 0.00 0.00 4.02
5105 5631 4.054671 GCTAGCTACATCCATTGACTCAC 58.945 47.826 7.70 0.00 0.00 3.51
5106 5632 3.963374 AGCTAGCTACATCCATTGACTCA 59.037 43.478 17.69 0.00 0.00 3.41
5107 5633 4.599047 AGCTAGCTACATCCATTGACTC 57.401 45.455 17.69 0.00 0.00 3.36
5108 5634 5.389520 TCTAGCTAGCTACATCCATTGACT 58.610 41.667 20.67 0.00 0.00 3.41
5109 5635 5.242838 ACTCTAGCTAGCTACATCCATTGAC 59.757 44.000 20.67 0.00 0.00 3.18
5110 5636 5.242615 CACTCTAGCTAGCTACATCCATTGA 59.757 44.000 20.67 12.25 0.00 2.57
5111 5637 5.468592 CACTCTAGCTAGCTACATCCATTG 58.531 45.833 20.67 8.54 0.00 2.82
5112 5638 4.021544 GCACTCTAGCTAGCTACATCCATT 60.022 45.833 20.67 0.00 0.00 3.16
5113 5639 3.509575 GCACTCTAGCTAGCTACATCCAT 59.490 47.826 20.67 0.00 0.00 3.41
5114 5640 2.887783 GCACTCTAGCTAGCTACATCCA 59.112 50.000 20.67 1.02 0.00 3.41
5115 5641 2.887783 TGCACTCTAGCTAGCTACATCC 59.112 50.000 20.67 8.66 34.99 3.51
5116 5642 3.608241 CGTGCACTCTAGCTAGCTACATC 60.608 52.174 20.67 8.66 34.99 3.06
5117 5643 2.292016 CGTGCACTCTAGCTAGCTACAT 59.708 50.000 20.67 6.12 34.99 2.29
5118 5644 1.671328 CGTGCACTCTAGCTAGCTACA 59.329 52.381 20.67 13.48 34.99 2.74
5119 5645 1.598430 GCGTGCACTCTAGCTAGCTAC 60.598 57.143 20.67 10.69 35.73 3.58
5120 5646 0.663688 GCGTGCACTCTAGCTAGCTA 59.336 55.000 22.85 22.85 35.73 3.32
5121 5647 1.315981 TGCGTGCACTCTAGCTAGCT 61.316 55.000 23.12 23.12 38.04 3.32
5122 5648 0.869454 CTGCGTGCACTCTAGCTAGC 60.869 60.000 16.35 6.62 37.83 3.42
5123 5649 0.453793 ACTGCGTGCACTCTAGCTAG 59.546 55.000 15.01 15.01 34.99 3.42
5124 5650 1.671328 CTACTGCGTGCACTCTAGCTA 59.329 52.381 16.19 0.00 34.99 3.32
5125 5651 0.453793 CTACTGCGTGCACTCTAGCT 59.546 55.000 16.19 0.00 34.99 3.32
5126 5652 0.171455 ACTACTGCGTGCACTCTAGC 59.829 55.000 16.19 11.38 0.00 3.42
5127 5653 1.901538 CACTACTGCGTGCACTCTAG 58.098 55.000 16.19 12.20 0.00 2.43
5129 5655 4.974792 CACTACTGCGTGCACTCT 57.025 55.556 16.19 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.