Multiple sequence alignment - TraesCS1B01G201500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G201500 chr1B 100.000 2804 0 0 1 2804 360983173 360985976 0.000000e+00 5179.0
1 TraesCS1B01G201500 chr1B 93.450 229 15 0 1 229 668197235 668197007 9.620000e-90 340.0
2 TraesCS1B01G201500 chr1B 86.188 181 12 4 229 397 142290912 142291091 1.720000e-42 183.0
3 TraesCS1B01G201500 chr1B 94.175 103 6 0 125 227 142290855 142290957 1.040000e-34 158.0
4 TraesCS1B01G201500 chr1B 97.917 48 1 0 229 276 360983354 360983401 1.790000e-12 84.2
5 TraesCS1B01G201500 chr1D 92.362 1571 80 15 451 2009 252489215 252487673 0.000000e+00 2200.0
6 TraesCS1B01G201500 chr1D 93.791 612 34 3 2194 2804 66379328 66378720 0.000000e+00 917.0
7 TraesCS1B01G201500 chr1D 90.029 682 56 10 2126 2804 320408063 320407391 0.000000e+00 872.0
8 TraesCS1B01G201500 chr1A 92.694 1492 53 24 620 2068 323287320 323285842 0.000000e+00 2100.0
9 TraesCS1B01G201500 chr2B 93.599 703 26 2 2120 2804 115893450 115892749 0.000000e+00 1031.0
10 TraesCS1B01G201500 chr2B 93.013 229 16 0 1 229 789542284 789542056 4.480000e-88 335.0
11 TraesCS1B01G201500 chr2B 83.146 178 16 4 233 399 789542099 789541925 1.740000e-32 150.0
12 TraesCS1B01G201500 chr2B 83.030 165 8 12 2119 2266 461514769 461514608 6.300000e-27 132.0
13 TraesCS1B01G201500 chr5A 92.275 699 40 5 2119 2804 338410036 338409339 0.000000e+00 979.0
14 TraesCS1B01G201500 chr5A 84.358 179 16 5 229 396 440975175 440974998 6.210000e-37 165.0
15 TraesCS1B01G201500 chr5A 91.228 57 5 0 2062 2118 40057670 40057726 8.330000e-11 78.7
16 TraesCS1B01G201500 chr4D 91.679 685 47 9 2124 2804 223628640 223627962 0.000000e+00 941.0
17 TraesCS1B01G201500 chr4D 93.450 229 15 0 1 229 261359281 261359053 9.620000e-90 340.0
18 TraesCS1B01G201500 chr4D 89.333 225 22 2 3 226 20530463 20530686 5.910000e-72 281.0
19 TraesCS1B01G201500 chr4D 86.592 179 12 3 229 396 261359100 261358923 1.330000e-43 187.0
20 TraesCS1B01G201500 chr2D 91.108 686 56 4 2120 2804 326408182 326408863 0.000000e+00 924.0
21 TraesCS1B01G201500 chr2D 86.111 180 13 3 229 397 391802117 391801939 1.720000e-42 183.0
22 TraesCS1B01G201500 chr2D 94.231 52 3 0 2069 2120 36379331 36379382 2.320000e-11 80.5
23 TraesCS1B01G201500 chr5D 90.883 691 52 9 2116 2804 438813375 438814056 0.000000e+00 917.0
24 TraesCS1B01G201500 chr5D 91.379 58 3 1 2065 2120 63104658 63104715 8.330000e-11 78.7
25 TraesCS1B01G201500 chr3A 90.262 688 53 12 2121 2804 514094334 514093657 0.000000e+00 887.0
26 TraesCS1B01G201500 chr3A 92.920 226 16 0 1 226 48446075 48446300 2.080000e-86 329.0
27 TraesCS1B01G201500 chr3A 91.775 231 14 2 1 226 48366638 48366868 1.620000e-82 316.0
28 TraesCS1B01G201500 chr3A 85.083 181 15 3 229 398 48366824 48367003 1.030000e-39 174.0
29 TraesCS1B01G201500 chr3A 85.083 181 15 3 229 398 48446256 48446435 1.030000e-39 174.0
30 TraesCS1B01G201500 chr3A 91.071 56 5 0 2065 2120 670553316 670553371 3.000000e-10 76.8
31 TraesCS1B01G201500 chr6A 91.512 648 44 5 2167 2804 367773932 367774578 0.000000e+00 881.0
32 TraesCS1B01G201500 chr6A 93.805 226 14 0 1 226 27563085 27562860 9.620000e-90 340.0
33 TraesCS1B01G201500 chr6A 83.889 180 17 4 229 397 27562904 27562726 8.040000e-36 161.0
34 TraesCS1B01G201500 chr7B 92.140 229 16 1 1 229 713142407 713142633 3.480000e-84 322.0
35 TraesCS1B01G201500 chr5B 92.000 150 11 1 6 155 393790628 393790480 2.830000e-50 209.0
36 TraesCS1B01G201500 chr5B 95.918 49 2 0 2065 2113 450455886 450455934 2.320000e-11 80.5
37 TraesCS1B01G201500 chr4B 94.643 56 3 0 2065 2120 538263363 538263418 1.380000e-13 87.9
38 TraesCS1B01G201500 chr6D 96.154 52 2 0 2069 2120 47079755 47079704 4.980000e-13 86.1
39 TraesCS1B01G201500 chr7A 92.857 56 4 0 2065 2120 118333671 118333726 6.440000e-12 82.4
40 TraesCS1B01G201500 chr3D 91.379 58 3 2 2065 2120 508401330 508401273 8.330000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G201500 chr1B 360983173 360985976 2803 False 2631.6 5179 98.9585 1 2804 2 chr1B.!!$F2 2803
1 TraesCS1B01G201500 chr1D 252487673 252489215 1542 True 2200.0 2200 92.3620 451 2009 1 chr1D.!!$R2 1558
2 TraesCS1B01G201500 chr1D 66378720 66379328 608 True 917.0 917 93.7910 2194 2804 1 chr1D.!!$R1 610
3 TraesCS1B01G201500 chr1D 320407391 320408063 672 True 872.0 872 90.0290 2126 2804 1 chr1D.!!$R3 678
4 TraesCS1B01G201500 chr1A 323285842 323287320 1478 True 2100.0 2100 92.6940 620 2068 1 chr1A.!!$R1 1448
5 TraesCS1B01G201500 chr2B 115892749 115893450 701 True 1031.0 1031 93.5990 2120 2804 1 chr2B.!!$R1 684
6 TraesCS1B01G201500 chr5A 338409339 338410036 697 True 979.0 979 92.2750 2119 2804 1 chr5A.!!$R1 685
7 TraesCS1B01G201500 chr4D 223627962 223628640 678 True 941.0 941 91.6790 2124 2804 1 chr4D.!!$R1 680
8 TraesCS1B01G201500 chr2D 326408182 326408863 681 False 924.0 924 91.1080 2120 2804 1 chr2D.!!$F2 684
9 TraesCS1B01G201500 chr5D 438813375 438814056 681 False 917.0 917 90.8830 2116 2804 1 chr5D.!!$F2 688
10 TraesCS1B01G201500 chr3A 514093657 514094334 677 True 887.0 887 90.2620 2121 2804 1 chr3A.!!$R1 683
11 TraesCS1B01G201500 chr6A 367773932 367774578 646 False 881.0 881 91.5120 2167 2804 1 chr6A.!!$F1 637


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.036483 TGTTGCAGCGCCTATCTTGA 60.036 50.0 2.29 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 2149 0.038067 AAAACCATTTTACCCCGCGC 60.038 50.0 0.0 0.0 0.0 6.86 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.823369 TCTAGCTCTACGGGAAGGG 57.177 57.895 0.00 0.00 0.00 3.95
19 20 1.219773 TCTAGCTCTACGGGAAGGGA 58.780 55.000 0.00 0.00 0.00 4.20
20 21 1.781529 TCTAGCTCTACGGGAAGGGAT 59.218 52.381 0.00 0.00 0.00 3.85
21 22 1.889829 CTAGCTCTACGGGAAGGGATG 59.110 57.143 0.00 0.00 0.00 3.51
22 23 0.261991 AGCTCTACGGGAAGGGATGA 59.738 55.000 0.00 0.00 0.00 2.92
23 24 1.133009 AGCTCTACGGGAAGGGATGAT 60.133 52.381 0.00 0.00 0.00 2.45
24 25 1.694696 GCTCTACGGGAAGGGATGATT 59.305 52.381 0.00 0.00 0.00 2.57
25 26 2.104963 GCTCTACGGGAAGGGATGATTT 59.895 50.000 0.00 0.00 0.00 2.17
26 27 3.433740 GCTCTACGGGAAGGGATGATTTT 60.434 47.826 0.00 0.00 0.00 1.82
27 28 4.781934 CTCTACGGGAAGGGATGATTTTT 58.218 43.478 0.00 0.00 0.00 1.94
28 29 4.523083 TCTACGGGAAGGGATGATTTTTG 58.477 43.478 0.00 0.00 0.00 2.44
29 30 1.824852 ACGGGAAGGGATGATTTTTGC 59.175 47.619 0.00 0.00 0.00 3.68
30 31 2.102578 CGGGAAGGGATGATTTTTGCT 58.897 47.619 0.00 0.00 0.00 3.91
31 32 2.099756 CGGGAAGGGATGATTTTTGCTC 59.900 50.000 0.00 0.00 0.00 4.26
32 33 3.099141 GGGAAGGGATGATTTTTGCTCA 58.901 45.455 0.00 0.00 0.00 4.26
33 34 3.131755 GGGAAGGGATGATTTTTGCTCAG 59.868 47.826 0.00 0.00 0.00 3.35
34 35 3.429960 GGAAGGGATGATTTTTGCTCAGC 60.430 47.826 0.00 0.00 0.00 4.26
35 36 3.097342 AGGGATGATTTTTGCTCAGCT 57.903 42.857 0.00 0.00 0.00 4.24
36 37 3.438183 AGGGATGATTTTTGCTCAGCTT 58.562 40.909 0.00 0.00 0.00 3.74
37 38 3.446516 AGGGATGATTTTTGCTCAGCTTC 59.553 43.478 0.00 0.00 0.00 3.86
38 39 3.432782 GGATGATTTTTGCTCAGCTTCG 58.567 45.455 0.00 0.00 0.00 3.79
39 40 3.119708 GGATGATTTTTGCTCAGCTTCGT 60.120 43.478 0.00 0.00 0.00 3.85
40 41 3.272439 TGATTTTTGCTCAGCTTCGTG 57.728 42.857 0.00 0.00 0.00 4.35
41 42 2.030893 TGATTTTTGCTCAGCTTCGTGG 60.031 45.455 0.00 0.00 0.00 4.94
42 43 1.388547 TTTTTGCTCAGCTTCGTGGT 58.611 45.000 0.00 0.00 0.00 4.16
43 44 1.388547 TTTTGCTCAGCTTCGTGGTT 58.611 45.000 0.00 0.00 0.00 3.67
44 45 1.388547 TTTGCTCAGCTTCGTGGTTT 58.611 45.000 0.00 0.00 0.00 3.27
45 46 0.944386 TTGCTCAGCTTCGTGGTTTC 59.056 50.000 0.00 0.00 0.00 2.78
46 47 0.106708 TGCTCAGCTTCGTGGTTTCT 59.893 50.000 0.00 0.00 0.00 2.52
47 48 0.793250 GCTCAGCTTCGTGGTTTCTC 59.207 55.000 0.00 0.00 0.00 2.87
48 49 1.873903 GCTCAGCTTCGTGGTTTCTCA 60.874 52.381 0.00 0.00 0.00 3.27
49 50 1.795286 CTCAGCTTCGTGGTTTCTCAC 59.205 52.381 0.00 0.00 0.00 3.51
50 51 1.138069 TCAGCTTCGTGGTTTCTCACA 59.862 47.619 0.00 0.00 37.50 3.58
51 52 2.146342 CAGCTTCGTGGTTTCTCACAT 58.854 47.619 0.00 0.00 37.50 3.21
52 53 2.096069 CAGCTTCGTGGTTTCTCACATG 60.096 50.000 0.00 0.00 37.50 3.21
53 54 1.873591 GCTTCGTGGTTTCTCACATGT 59.126 47.619 0.00 0.00 37.50 3.21
54 55 2.349817 GCTTCGTGGTTTCTCACATGTG 60.350 50.000 20.18 20.18 37.50 3.21
55 56 2.900716 TCGTGGTTTCTCACATGTGA 57.099 45.000 26.33 26.33 37.50 3.58
56 57 3.401033 TCGTGGTTTCTCACATGTGAT 57.599 42.857 28.00 0.00 39.13 3.06
57 58 4.529109 TCGTGGTTTCTCACATGTGATA 57.471 40.909 28.00 18.85 39.13 2.15
58 59 4.888917 TCGTGGTTTCTCACATGTGATAA 58.111 39.130 28.00 23.38 39.13 1.75
59 60 5.487433 TCGTGGTTTCTCACATGTGATAAT 58.513 37.500 28.00 0.00 39.13 1.28
60 61 5.351189 TCGTGGTTTCTCACATGTGATAATG 59.649 40.000 28.00 16.61 39.13 1.90
61 62 5.447683 CGTGGTTTCTCACATGTGATAATGG 60.448 44.000 28.00 16.25 39.13 3.16
62 63 5.647658 GTGGTTTCTCACATGTGATAATGGA 59.352 40.000 28.00 18.24 39.13 3.41
63 64 5.882000 TGGTTTCTCACATGTGATAATGGAG 59.118 40.000 28.00 14.85 39.13 3.86
64 65 5.297776 GGTTTCTCACATGTGATAATGGAGG 59.702 44.000 28.00 14.14 39.13 4.30
65 66 5.698741 TTCTCACATGTGATAATGGAGGT 57.301 39.130 28.00 0.00 39.13 3.85
66 67 5.698741 TCTCACATGTGATAATGGAGGTT 57.301 39.130 28.00 0.00 39.13 3.50
67 68 5.430886 TCTCACATGTGATAATGGAGGTTG 58.569 41.667 28.00 12.25 39.13 3.77
68 69 5.189539 TCTCACATGTGATAATGGAGGTTGA 59.810 40.000 28.00 14.29 39.13 3.18
69 70 5.185454 TCACATGTGATAATGGAGGTTGAC 58.815 41.667 24.56 0.00 34.14 3.18
70 71 5.045651 TCACATGTGATAATGGAGGTTGACT 60.046 40.000 24.56 0.00 34.14 3.41
71 72 5.065602 CACATGTGATAATGGAGGTTGACTG 59.934 44.000 21.64 0.00 31.46 3.51
72 73 4.908601 TGTGATAATGGAGGTTGACTGT 57.091 40.909 0.00 0.00 0.00 3.55
73 74 4.832248 TGTGATAATGGAGGTTGACTGTC 58.168 43.478 0.00 0.00 0.00 3.51
74 75 4.285775 TGTGATAATGGAGGTTGACTGTCA 59.714 41.667 6.36 6.36 0.00 3.58
75 76 4.872691 GTGATAATGGAGGTTGACTGTCAG 59.127 45.833 10.77 0.00 0.00 3.51
76 77 2.867109 AATGGAGGTTGACTGTCAGG 57.133 50.000 10.77 0.00 0.00 3.86
77 78 2.030027 ATGGAGGTTGACTGTCAGGA 57.970 50.000 10.77 0.00 0.00 3.86
78 79 2.030027 TGGAGGTTGACTGTCAGGAT 57.970 50.000 10.77 0.70 0.00 3.24
79 80 1.902508 TGGAGGTTGACTGTCAGGATC 59.097 52.381 10.77 9.55 0.00 3.36
80 81 2.183679 GGAGGTTGACTGTCAGGATCT 58.816 52.381 10.77 2.69 0.00 2.75
81 82 2.093764 GGAGGTTGACTGTCAGGATCTG 60.094 54.545 10.77 0.00 0.00 2.90
82 83 1.905215 AGGTTGACTGTCAGGATCTGG 59.095 52.381 10.77 0.00 31.51 3.86
83 84 1.625818 GGTTGACTGTCAGGATCTGGT 59.374 52.381 10.77 0.00 31.51 4.00
84 85 2.039084 GGTTGACTGTCAGGATCTGGTT 59.961 50.000 10.77 0.00 31.51 3.67
85 86 3.260884 GGTTGACTGTCAGGATCTGGTTA 59.739 47.826 10.77 0.00 31.51 2.85
86 87 4.262894 GGTTGACTGTCAGGATCTGGTTAA 60.263 45.833 10.77 0.00 31.51 2.01
87 88 4.537135 TGACTGTCAGGATCTGGTTAAC 57.463 45.455 6.36 0.00 31.51 2.01
88 89 3.260884 TGACTGTCAGGATCTGGTTAACC 59.739 47.826 18.27 18.27 31.51 2.85
89 90 3.515901 GACTGTCAGGATCTGGTTAACCT 59.484 47.826 24.78 5.33 36.82 3.50
90 91 3.515901 ACTGTCAGGATCTGGTTAACCTC 59.484 47.826 24.78 14.15 36.82 3.85
91 92 3.772025 CTGTCAGGATCTGGTTAACCTCT 59.228 47.826 24.78 9.75 36.82 3.69
92 93 4.942944 TGTCAGGATCTGGTTAACCTCTA 58.057 43.478 24.78 10.89 36.82 2.43
93 94 4.956700 TGTCAGGATCTGGTTAACCTCTAG 59.043 45.833 24.78 14.32 36.82 2.43
94 95 5.202004 GTCAGGATCTGGTTAACCTCTAGA 58.798 45.833 24.78 18.90 36.82 2.43
95 96 5.657302 GTCAGGATCTGGTTAACCTCTAGAA 59.343 44.000 24.78 3.07 36.82 2.10
96 97 5.894393 TCAGGATCTGGTTAACCTCTAGAAG 59.106 44.000 24.78 12.91 36.82 2.85
97 98 5.659079 CAGGATCTGGTTAACCTCTAGAAGT 59.341 44.000 24.78 6.28 36.82 3.01
98 99 5.894964 AGGATCTGGTTAACCTCTAGAAGTC 59.105 44.000 24.78 13.80 36.82 3.01
99 100 5.221087 GGATCTGGTTAACCTCTAGAAGTCG 60.221 48.000 24.78 2.01 36.82 4.18
100 101 3.442977 TCTGGTTAACCTCTAGAAGTCGC 59.557 47.826 24.78 0.00 36.82 5.19
101 102 2.163010 TGGTTAACCTCTAGAAGTCGCG 59.837 50.000 24.78 0.00 36.82 5.87
102 103 2.183636 GTTAACCTCTAGAAGTCGCGC 58.816 52.381 0.00 0.00 0.00 6.86
103 104 0.376152 TAACCTCTAGAAGTCGCGCG 59.624 55.000 26.76 26.76 0.00 6.86
104 105 2.024871 CCTCTAGAAGTCGCGCGG 59.975 66.667 31.69 12.14 0.00 6.46
105 106 2.652496 CTCTAGAAGTCGCGCGGC 60.652 66.667 29.76 29.76 0.00 6.53
106 107 3.396911 CTCTAGAAGTCGCGCGGCA 62.397 63.158 37.48 15.26 0.00 5.69
107 108 2.506217 CTAGAAGTCGCGCGGCAA 60.506 61.111 37.48 17.39 0.00 4.52
108 109 2.789203 CTAGAAGTCGCGCGGCAAC 61.789 63.158 37.48 27.59 0.00 4.17
109 110 3.277211 TAGAAGTCGCGCGGCAACT 62.277 57.895 37.48 32.29 0.00 3.16
110 111 4.135493 GAAGTCGCGCGGCAACTC 62.135 66.667 37.48 24.55 0.00 3.01
111 112 4.664677 AAGTCGCGCGGCAACTCT 62.665 61.111 37.48 13.08 0.00 3.24
112 113 3.277211 AAGTCGCGCGGCAACTCTA 62.277 57.895 37.48 8.59 0.00 2.43
113 114 3.248171 GTCGCGCGGCAACTCTAG 61.248 66.667 31.92 0.00 0.00 2.43
114 115 3.436924 TCGCGCGGCAACTCTAGA 61.437 61.111 31.69 2.53 0.00 2.43
115 116 2.278857 CGCGCGGCAACTCTAGAT 60.279 61.111 24.84 0.00 0.00 1.98
116 117 2.296480 CGCGCGGCAACTCTAGATC 61.296 63.158 24.84 0.00 0.00 2.75
117 118 1.066587 GCGCGGCAACTCTAGATCT 59.933 57.895 8.83 0.00 0.00 2.75
118 119 1.211818 GCGCGGCAACTCTAGATCTG 61.212 60.000 8.83 0.00 0.00 2.90
119 120 0.101399 CGCGGCAACTCTAGATCTGT 59.899 55.000 5.18 0.00 0.00 3.41
120 121 1.469940 CGCGGCAACTCTAGATCTGTT 60.470 52.381 5.18 0.00 0.00 3.16
121 122 1.929836 GCGGCAACTCTAGATCTGTTG 59.070 52.381 16.34 16.34 42.55 3.33
126 127 2.575694 ACTCTAGATCTGTTGCAGCG 57.424 50.000 5.18 0.00 0.00 5.18
127 128 1.207390 CTCTAGATCTGTTGCAGCGC 58.793 55.000 5.18 0.00 0.00 5.92
128 129 0.179100 TCTAGATCTGTTGCAGCGCC 60.179 55.000 2.29 0.00 0.00 6.53
129 130 0.179089 CTAGATCTGTTGCAGCGCCT 60.179 55.000 2.29 0.00 0.00 5.52
130 131 1.067669 CTAGATCTGTTGCAGCGCCTA 59.932 52.381 2.29 0.00 0.00 3.93
131 132 0.467384 AGATCTGTTGCAGCGCCTAT 59.533 50.000 2.29 0.00 0.00 2.57
132 133 0.864455 GATCTGTTGCAGCGCCTATC 59.136 55.000 2.29 0.00 0.00 2.08
133 134 0.467384 ATCTGTTGCAGCGCCTATCT 59.533 50.000 2.29 0.00 0.00 1.98
134 135 0.250234 TCTGTTGCAGCGCCTATCTT 59.750 50.000 2.29 0.00 0.00 2.40
135 136 0.376152 CTGTTGCAGCGCCTATCTTG 59.624 55.000 2.29 0.00 0.00 3.02
136 137 0.036483 TGTTGCAGCGCCTATCTTGA 60.036 50.000 2.29 0.00 0.00 3.02
137 138 0.375106 GTTGCAGCGCCTATCTTGAC 59.625 55.000 2.29 0.00 0.00 3.18
138 139 0.250234 TTGCAGCGCCTATCTTGACT 59.750 50.000 2.29 0.00 0.00 3.41
139 140 0.460811 TGCAGCGCCTATCTTGACTG 60.461 55.000 2.29 0.00 0.00 3.51
140 141 0.179100 GCAGCGCCTATCTTGACTGA 60.179 55.000 2.29 0.00 0.00 3.41
141 142 1.850377 CAGCGCCTATCTTGACTGAG 58.150 55.000 2.29 0.00 0.00 3.35
142 143 1.135915 CAGCGCCTATCTTGACTGAGT 59.864 52.381 2.29 0.00 0.00 3.41
143 144 1.827969 AGCGCCTATCTTGACTGAGTT 59.172 47.619 2.29 0.00 0.00 3.01
144 145 3.024547 AGCGCCTATCTTGACTGAGTTA 58.975 45.455 2.29 0.00 0.00 2.24
145 146 3.067461 AGCGCCTATCTTGACTGAGTTAG 59.933 47.826 2.29 0.00 0.00 2.34
146 147 3.797184 GCGCCTATCTTGACTGAGTTAGG 60.797 52.174 0.00 3.47 40.07 2.69
147 148 3.243569 CGCCTATCTTGACTGAGTTAGGG 60.244 52.174 8.84 0.00 38.61 3.53
148 149 3.070302 GCCTATCTTGACTGAGTTAGGGG 59.930 52.174 8.84 4.94 38.61 4.79
149 150 4.547671 CCTATCTTGACTGAGTTAGGGGA 58.452 47.826 0.32 0.00 36.27 4.81
150 151 4.586841 CCTATCTTGACTGAGTTAGGGGAG 59.413 50.000 0.32 0.00 36.27 4.30
151 152 3.827817 TCTTGACTGAGTTAGGGGAGA 57.172 47.619 0.00 0.00 0.00 3.71
152 153 4.338795 TCTTGACTGAGTTAGGGGAGAT 57.661 45.455 0.00 0.00 0.00 2.75
153 154 4.689062 TCTTGACTGAGTTAGGGGAGATT 58.311 43.478 0.00 0.00 0.00 2.40
154 155 5.838955 TCTTGACTGAGTTAGGGGAGATTA 58.161 41.667 0.00 0.00 0.00 1.75
155 156 5.894393 TCTTGACTGAGTTAGGGGAGATTAG 59.106 44.000 0.00 0.00 0.00 1.73
156 157 5.208294 TGACTGAGTTAGGGGAGATTAGT 57.792 43.478 0.00 0.00 0.00 2.24
157 158 4.956700 TGACTGAGTTAGGGGAGATTAGTG 59.043 45.833 0.00 0.00 0.00 2.74
158 159 3.707102 ACTGAGTTAGGGGAGATTAGTGC 59.293 47.826 0.00 0.00 0.00 4.40
159 160 3.964031 CTGAGTTAGGGGAGATTAGTGCT 59.036 47.826 0.00 0.00 0.00 4.40
160 161 5.138758 TGAGTTAGGGGAGATTAGTGCTA 57.861 43.478 0.00 0.00 0.00 3.49
161 162 5.141182 TGAGTTAGGGGAGATTAGTGCTAG 58.859 45.833 0.00 0.00 0.00 3.42
162 163 5.141910 GAGTTAGGGGAGATTAGTGCTAGT 58.858 45.833 0.00 0.00 0.00 2.57
163 164 5.530243 AGTTAGGGGAGATTAGTGCTAGTT 58.470 41.667 0.00 0.00 0.00 2.24
164 165 5.965091 AGTTAGGGGAGATTAGTGCTAGTTT 59.035 40.000 0.00 0.00 0.00 2.66
165 166 6.444171 AGTTAGGGGAGATTAGTGCTAGTTTT 59.556 38.462 0.00 0.00 0.00 2.43
166 167 5.104259 AGGGGAGATTAGTGCTAGTTTTG 57.896 43.478 0.00 0.00 0.00 2.44
167 168 3.628032 GGGGAGATTAGTGCTAGTTTTGC 59.372 47.826 0.00 0.00 0.00 3.68
168 169 4.518249 GGGAGATTAGTGCTAGTTTTGCT 58.482 43.478 0.00 0.00 0.00 3.91
169 170 4.944317 GGGAGATTAGTGCTAGTTTTGCTT 59.056 41.667 0.00 0.00 0.00 3.91
170 171 5.065346 GGGAGATTAGTGCTAGTTTTGCTTC 59.935 44.000 0.00 0.00 0.00 3.86
171 172 5.877564 GGAGATTAGTGCTAGTTTTGCTTCT 59.122 40.000 0.00 0.00 0.00 2.85
172 173 6.372937 GGAGATTAGTGCTAGTTTTGCTTCTT 59.627 38.462 0.00 0.00 0.00 2.52
173 174 7.094592 GGAGATTAGTGCTAGTTTTGCTTCTTT 60.095 37.037 0.00 0.00 0.00 2.52
174 175 7.811653 AGATTAGTGCTAGTTTTGCTTCTTTC 58.188 34.615 0.00 0.00 0.00 2.62
175 176 7.663493 AGATTAGTGCTAGTTTTGCTTCTTTCT 59.337 33.333 0.00 0.00 0.00 2.52
176 177 5.681337 AGTGCTAGTTTTGCTTCTTTCTC 57.319 39.130 0.00 0.00 0.00 2.87
177 178 5.372373 AGTGCTAGTTTTGCTTCTTTCTCT 58.628 37.500 0.00 0.00 0.00 3.10
178 179 5.238214 AGTGCTAGTTTTGCTTCTTTCTCTG 59.762 40.000 0.00 0.00 0.00 3.35
179 180 5.008118 GTGCTAGTTTTGCTTCTTTCTCTGT 59.992 40.000 0.00 0.00 0.00 3.41
180 181 5.590259 TGCTAGTTTTGCTTCTTTCTCTGTT 59.410 36.000 0.00 0.00 0.00 3.16
181 182 6.765989 TGCTAGTTTTGCTTCTTTCTCTGTTA 59.234 34.615 0.00 0.00 0.00 2.41
182 183 7.072647 GCTAGTTTTGCTTCTTTCTCTGTTAC 58.927 38.462 0.00 0.00 0.00 2.50
183 184 6.378710 AGTTTTGCTTCTTTCTCTGTTACC 57.621 37.500 0.00 0.00 0.00 2.85
184 185 5.299531 AGTTTTGCTTCTTTCTCTGTTACCC 59.700 40.000 0.00 0.00 0.00 3.69
185 186 4.431416 TTGCTTCTTTCTCTGTTACCCA 57.569 40.909 0.00 0.00 0.00 4.51
186 187 4.640771 TGCTTCTTTCTCTGTTACCCAT 57.359 40.909 0.00 0.00 0.00 4.00
187 188 4.326826 TGCTTCTTTCTCTGTTACCCATG 58.673 43.478 0.00 0.00 0.00 3.66
188 189 4.202461 TGCTTCTTTCTCTGTTACCCATGT 60.202 41.667 0.00 0.00 0.00 3.21
189 190 4.393371 GCTTCTTTCTCTGTTACCCATGTC 59.607 45.833 0.00 0.00 0.00 3.06
190 191 5.551233 CTTCTTTCTCTGTTACCCATGTCA 58.449 41.667 0.00 0.00 0.00 3.58
191 192 5.152623 TCTTTCTCTGTTACCCATGTCAG 57.847 43.478 0.00 0.00 0.00 3.51
192 193 4.593206 TCTTTCTCTGTTACCCATGTCAGT 59.407 41.667 0.00 0.00 0.00 3.41
193 194 5.778241 TCTTTCTCTGTTACCCATGTCAGTA 59.222 40.000 0.00 0.00 0.00 2.74
194 195 5.661056 TTCTCTGTTACCCATGTCAGTAG 57.339 43.478 0.00 0.00 0.00 2.57
195 196 4.023980 TCTCTGTTACCCATGTCAGTAGG 58.976 47.826 0.00 0.00 0.00 3.18
197 198 3.104512 CTGTTACCCATGTCAGTAGGGA 58.895 50.000 13.23 0.00 45.80 4.20
198 199 3.104512 TGTTACCCATGTCAGTAGGGAG 58.895 50.000 13.23 0.00 45.80 4.30
199 200 3.245839 TGTTACCCATGTCAGTAGGGAGA 60.246 47.826 13.23 0.63 45.80 3.71
200 201 2.877154 ACCCATGTCAGTAGGGAGAT 57.123 50.000 13.23 0.00 45.80 2.75
201 202 3.136641 ACCCATGTCAGTAGGGAGATT 57.863 47.619 13.23 0.00 45.80 2.40
202 203 4.280789 ACCCATGTCAGTAGGGAGATTA 57.719 45.455 13.23 0.00 45.80 1.75
203 204 4.631234 ACCCATGTCAGTAGGGAGATTAA 58.369 43.478 13.23 0.00 45.80 1.40
204 205 5.227593 ACCCATGTCAGTAGGGAGATTAAT 58.772 41.667 13.23 0.00 45.80 1.40
205 206 6.390504 ACCCATGTCAGTAGGGAGATTAATA 58.609 40.000 13.23 0.00 45.80 0.98
206 207 7.025620 ACCCATGTCAGTAGGGAGATTAATAT 58.974 38.462 13.23 0.00 45.80 1.28
207 208 7.517604 ACCCATGTCAGTAGGGAGATTAATATT 59.482 37.037 13.23 0.00 45.80 1.28
208 209 8.043710 CCCATGTCAGTAGGGAGATTAATATTC 58.956 40.741 2.34 0.00 45.80 1.75
209 210 8.043710 CCATGTCAGTAGGGAGATTAATATTCC 58.956 40.741 0.00 0.00 0.00 3.01
210 211 7.228314 TGTCAGTAGGGAGATTAATATTCCG 57.772 40.000 1.62 0.00 31.59 4.30
211 212 6.210784 TGTCAGTAGGGAGATTAATATTCCGG 59.789 42.308 1.62 0.00 31.59 5.14
212 213 5.187186 TCAGTAGGGAGATTAATATTCCGGC 59.813 44.000 1.62 0.00 31.59 6.13
213 214 4.470304 AGTAGGGAGATTAATATTCCGGCC 59.530 45.833 1.62 0.00 31.59 6.13
214 215 2.576648 AGGGAGATTAATATTCCGGCCC 59.423 50.000 1.62 0.00 31.59 5.80
215 216 2.307686 GGGAGATTAATATTCCGGCCCA 59.692 50.000 0.00 0.00 33.28 5.36
216 217 3.344515 GGAGATTAATATTCCGGCCCAC 58.655 50.000 0.00 0.00 0.00 4.61
217 218 3.344515 GAGATTAATATTCCGGCCCACC 58.655 50.000 0.00 0.00 0.00 4.61
218 219 2.714250 AGATTAATATTCCGGCCCACCA 59.286 45.455 0.00 0.00 34.57 4.17
219 220 3.139397 AGATTAATATTCCGGCCCACCAA 59.861 43.478 0.00 0.00 34.57 3.67
220 221 3.603965 TTAATATTCCGGCCCACCAAT 57.396 42.857 0.00 0.00 34.57 3.16
221 222 1.703411 AATATTCCGGCCCACCAATG 58.297 50.000 0.00 0.00 34.57 2.82
222 223 0.555769 ATATTCCGGCCCACCAATGT 59.444 50.000 0.00 0.00 34.57 2.71
223 224 0.395036 TATTCCGGCCCACCAATGTG 60.395 55.000 0.00 0.00 42.39 3.21
226 227 3.301554 CGGCCCACCAATGTGCAA 61.302 61.111 0.00 0.00 41.35 4.08
227 228 2.658422 GGCCCACCAATGTGCAAG 59.342 61.111 0.00 0.00 41.35 4.01
228 229 1.907807 GGCCCACCAATGTGCAAGA 60.908 57.895 0.00 0.00 41.35 3.02
229 230 1.290009 GCCCACCAATGTGCAAGAC 59.710 57.895 0.00 0.00 41.35 3.01
230 231 1.966762 CCCACCAATGTGCAAGACC 59.033 57.895 0.00 0.00 41.35 3.85
231 232 1.535204 CCCACCAATGTGCAAGACCC 61.535 60.000 0.00 0.00 41.35 4.46
232 233 0.827089 CCACCAATGTGCAAGACCCA 60.827 55.000 0.00 0.00 41.35 4.51
233 234 1.259609 CACCAATGTGCAAGACCCAT 58.740 50.000 0.00 0.00 35.31 4.00
234 235 1.067425 CACCAATGTGCAAGACCCATG 60.067 52.381 0.00 0.00 35.31 3.66
235 236 1.259609 CCAATGTGCAAGACCCATGT 58.740 50.000 0.00 0.00 0.00 3.21
236 237 1.619827 CCAATGTGCAAGACCCATGTT 59.380 47.619 0.00 0.00 0.00 2.71
237 238 2.824936 CCAATGTGCAAGACCCATGTTA 59.175 45.455 0.00 0.00 0.00 2.41
238 239 3.119388 CCAATGTGCAAGACCCATGTTAG 60.119 47.826 0.00 0.00 0.00 2.34
239 240 2.949177 TGTGCAAGACCCATGTTAGT 57.051 45.000 0.00 0.00 0.00 2.24
240 241 4.568072 ATGTGCAAGACCCATGTTAGTA 57.432 40.909 0.00 0.00 0.00 1.82
241 242 3.937814 TGTGCAAGACCCATGTTAGTAG 58.062 45.455 0.00 0.00 0.00 2.57
242 243 3.270877 GTGCAAGACCCATGTTAGTAGG 58.729 50.000 0.00 0.00 0.00 3.18
244 245 2.504175 GCAAGACCCATGTTAGTAGGGA 59.496 50.000 3.32 0.00 45.80 4.20
245 246 3.432326 GCAAGACCCATGTTAGTAGGGAG 60.432 52.174 3.32 0.00 45.80 4.30
246 247 4.030913 CAAGACCCATGTTAGTAGGGAGA 58.969 47.826 3.32 0.00 45.80 3.71
247 248 4.561254 AGACCCATGTTAGTAGGGAGAT 57.439 45.455 3.32 0.00 45.80 2.75
248 249 4.897051 AGACCCATGTTAGTAGGGAGATT 58.103 43.478 3.32 0.00 45.80 2.40
249 250 6.039415 AGACCCATGTTAGTAGGGAGATTA 57.961 41.667 3.32 0.00 45.80 1.75
250 251 6.449956 AGACCCATGTTAGTAGGGAGATTAA 58.550 40.000 3.32 0.00 45.80 1.40
251 252 7.082972 AGACCCATGTTAGTAGGGAGATTAAT 58.917 38.462 3.32 0.00 45.80 1.40
252 253 8.239478 AGACCCATGTTAGTAGGGAGATTAATA 58.761 37.037 3.32 0.00 45.80 0.98
253 254 8.990693 ACCCATGTTAGTAGGGAGATTAATAT 57.009 34.615 3.32 0.00 45.80 1.28
254 255 9.406662 ACCCATGTTAGTAGGGAGATTAATATT 57.593 33.333 3.32 0.00 45.80 1.28
255 256 9.892130 CCCATGTTAGTAGGGAGATTAATATTC 57.108 37.037 0.00 0.00 45.80 1.75
256 257 9.892130 CCATGTTAGTAGGGAGATTAATATTCC 57.108 37.037 0.00 0.00 0.00 3.01
257 258 9.587772 CATGTTAGTAGGGAGATTAATATTCCG 57.412 37.037 1.62 0.00 31.59 4.30
258 259 8.130671 TGTTAGTAGGGAGATTAATATTCCGG 57.869 38.462 1.62 0.00 31.59 5.14
259 260 5.678955 AGTAGGGAGATTAATATTCCGGC 57.321 43.478 1.62 0.00 31.59 6.13
260 261 4.470304 AGTAGGGAGATTAATATTCCGGCC 59.530 45.833 1.62 0.00 31.59 6.13
261 262 2.576648 AGGGAGATTAATATTCCGGCCC 59.423 50.000 1.62 0.00 31.59 5.80
262 263 2.307686 GGGAGATTAATATTCCGGCCCA 59.692 50.000 0.00 0.00 33.28 5.36
263 264 3.344515 GGAGATTAATATTCCGGCCCAC 58.655 50.000 0.00 0.00 0.00 4.61
264 265 3.344515 GAGATTAATATTCCGGCCCACC 58.655 50.000 0.00 0.00 0.00 4.61
265 266 2.714250 AGATTAATATTCCGGCCCACCA 59.286 45.455 0.00 0.00 34.57 4.17
266 267 3.139397 AGATTAATATTCCGGCCCACCAA 59.861 43.478 0.00 0.00 34.57 3.67
267 268 3.603965 TTAATATTCCGGCCCACCAAT 57.396 42.857 0.00 0.00 34.57 3.16
268 269 1.703411 AATATTCCGGCCCACCAATG 58.297 50.000 0.00 0.00 34.57 2.82
269 270 0.555769 ATATTCCGGCCCACCAATGT 59.444 50.000 0.00 0.00 34.57 2.71
270 271 0.395036 TATTCCGGCCCACCAATGTG 60.395 55.000 0.00 0.00 42.39 3.21
273 274 3.301554 CGGCCCACCAATGTGCAA 61.302 61.111 0.00 0.00 41.35 4.08
274 275 2.658422 GGCCCACCAATGTGCAAG 59.342 61.111 0.00 0.00 41.35 4.01
275 276 1.907807 GGCCCACCAATGTGCAAGA 60.908 57.895 0.00 0.00 41.35 3.02
276 277 1.259840 GGCCCACCAATGTGCAAGAT 61.260 55.000 0.00 0.00 41.35 2.40
277 278 0.609662 GCCCACCAATGTGCAAGATT 59.390 50.000 0.00 0.00 41.35 2.40
278 279 1.404583 GCCCACCAATGTGCAAGATTC 60.405 52.381 0.00 0.00 41.35 2.52
279 280 1.894466 CCCACCAATGTGCAAGATTCA 59.106 47.619 0.00 0.00 41.35 2.57
280 281 2.094390 CCCACCAATGTGCAAGATTCAG 60.094 50.000 0.00 0.00 41.35 3.02
281 282 2.821378 CCACCAATGTGCAAGATTCAGA 59.179 45.455 0.00 0.00 41.35 3.27
282 283 3.119602 CCACCAATGTGCAAGATTCAGAG 60.120 47.826 0.00 0.00 41.35 3.35
283 284 3.504906 CACCAATGTGCAAGATTCAGAGT 59.495 43.478 0.00 0.00 35.31 3.24
284 285 3.504906 ACCAATGTGCAAGATTCAGAGTG 59.495 43.478 0.00 0.00 0.00 3.51
285 286 3.119602 CCAATGTGCAAGATTCAGAGTGG 60.120 47.826 0.00 0.00 36.79 4.00
286 287 3.708403 ATGTGCAAGATTCAGAGTGGA 57.292 42.857 0.00 0.00 0.00 4.02
287 288 2.771089 TGTGCAAGATTCAGAGTGGAC 58.229 47.619 0.00 0.00 33.41 4.02
288 289 1.728971 GTGCAAGATTCAGAGTGGACG 59.271 52.381 0.00 0.00 0.00 4.79
289 290 1.338105 TGCAAGATTCAGAGTGGACGG 60.338 52.381 0.00 0.00 0.00 4.79
290 291 1.066858 GCAAGATTCAGAGTGGACGGA 60.067 52.381 0.00 0.00 0.00 4.69
291 292 2.886081 CAAGATTCAGAGTGGACGGAG 58.114 52.381 0.00 0.00 0.00 4.63
292 293 2.493675 CAAGATTCAGAGTGGACGGAGA 59.506 50.000 0.00 0.00 0.00 3.71
293 294 2.374184 AGATTCAGAGTGGACGGAGAG 58.626 52.381 0.00 0.00 0.00 3.20
294 295 2.096248 GATTCAGAGTGGACGGAGAGT 58.904 52.381 0.00 0.00 0.00 3.24
295 296 1.996798 TTCAGAGTGGACGGAGAGTT 58.003 50.000 0.00 0.00 0.00 3.01
296 297 1.248486 TCAGAGTGGACGGAGAGTTG 58.752 55.000 0.00 0.00 0.00 3.16
297 298 0.244994 CAGAGTGGACGGAGAGTTGG 59.755 60.000 0.00 0.00 0.00 3.77
298 299 1.079750 GAGTGGACGGAGAGTTGGC 60.080 63.158 0.00 0.00 0.00 4.52
299 300 1.534235 AGTGGACGGAGAGTTGGCT 60.534 57.895 0.00 0.00 0.00 4.75
300 301 1.079750 GTGGACGGAGAGTTGGCTC 60.080 63.158 0.00 0.00 41.94 4.70
301 302 2.182030 GGACGGAGAGTTGGCTCG 59.818 66.667 0.00 0.00 46.03 5.03
302 303 2.341101 GGACGGAGAGTTGGCTCGA 61.341 63.158 0.00 0.00 46.03 4.04
303 304 1.668101 GGACGGAGAGTTGGCTCGAT 61.668 60.000 0.00 0.00 46.03 3.59
304 305 0.526524 GACGGAGAGTTGGCTCGATG 60.527 60.000 0.00 0.00 46.03 3.84
305 306 1.251527 ACGGAGAGTTGGCTCGATGT 61.252 55.000 0.00 0.00 46.03 3.06
306 307 0.803768 CGGAGAGTTGGCTCGATGTG 60.804 60.000 0.00 0.00 46.03 3.21
307 308 0.532573 GGAGAGTTGGCTCGATGTGA 59.467 55.000 0.00 0.00 46.03 3.58
308 309 1.470632 GGAGAGTTGGCTCGATGTGAG 60.471 57.143 0.00 0.00 46.03 3.51
313 314 4.823276 GGCTCGATGTGAGTCCTG 57.177 61.111 0.00 0.00 43.83 3.86
314 315 2.193532 GGCTCGATGTGAGTCCTGA 58.806 57.895 0.00 0.00 43.83 3.86
315 316 0.179124 GGCTCGATGTGAGTCCTGAC 60.179 60.000 0.00 0.00 43.83 3.51
316 317 2.562390 GGCTCGATGTGAGTCCTGACT 61.562 57.143 0.00 0.00 43.83 3.41
317 318 4.042926 GGCTCGATGTGAGTCCTGACTT 62.043 54.545 0.63 0.00 43.83 3.01
318 319 3.584406 CTCGATGTGAGTCCTGACTTT 57.416 47.619 0.63 0.00 42.66 2.66
319 320 3.506810 CTCGATGTGAGTCCTGACTTTC 58.493 50.000 0.63 0.00 42.66 2.62
320 321 3.157881 TCGATGTGAGTCCTGACTTTCT 58.842 45.455 0.63 0.00 42.66 2.52
321 322 3.057245 TCGATGTGAGTCCTGACTTTCTG 60.057 47.826 0.63 0.00 42.66 3.02
322 323 2.533266 TGTGAGTCCTGACTTTCTGC 57.467 50.000 0.63 0.00 42.66 4.26
323 324 1.762370 TGTGAGTCCTGACTTTCTGCA 59.238 47.619 0.63 0.00 42.66 4.41
324 325 2.369860 TGTGAGTCCTGACTTTCTGCAT 59.630 45.455 0.63 0.00 42.66 3.96
325 326 2.999355 GTGAGTCCTGACTTTCTGCATC 59.001 50.000 0.63 0.00 42.66 3.91
326 327 2.027745 TGAGTCCTGACTTTCTGCATCC 60.028 50.000 0.63 0.00 42.66 3.51
327 328 1.280421 AGTCCTGACTTTCTGCATCCC 59.720 52.381 0.00 0.00 38.83 3.85
328 329 1.280421 GTCCTGACTTTCTGCATCCCT 59.720 52.381 0.00 0.00 0.00 4.20
329 330 1.280133 TCCTGACTTTCTGCATCCCTG 59.720 52.381 0.00 0.00 0.00 4.45
338 339 2.109181 GCATCCCTGCCTACGGAC 59.891 66.667 0.00 0.00 42.88 4.79
339 340 2.417516 CATCCCTGCCTACGGACG 59.582 66.667 0.00 0.00 0.00 4.79
340 341 2.838225 ATCCCTGCCTACGGACGG 60.838 66.667 0.00 0.00 0.00 4.79
341 342 3.369410 ATCCCTGCCTACGGACGGA 62.369 63.158 0.00 0.00 0.00 4.69
342 343 2.658321 ATCCCTGCCTACGGACGGAT 62.658 60.000 0.00 0.00 0.00 4.18
343 344 2.432300 CCCTGCCTACGGACGGATT 61.432 63.158 0.00 0.00 0.00 3.01
344 345 1.227263 CCTGCCTACGGACGGATTG 60.227 63.158 0.00 0.00 0.00 2.67
345 346 1.515954 CTGCCTACGGACGGATTGT 59.484 57.895 0.00 0.00 0.00 2.71
346 347 0.742505 CTGCCTACGGACGGATTGTA 59.257 55.000 0.00 0.00 0.00 2.41
347 348 1.135527 CTGCCTACGGACGGATTGTAA 59.864 52.381 0.00 0.00 0.00 2.41
348 349 1.135024 TGCCTACGGACGGATTGTAAC 60.135 52.381 0.00 0.00 0.00 2.50
349 350 1.135024 GCCTACGGACGGATTGTAACA 60.135 52.381 0.00 0.00 0.00 2.41
350 351 2.533266 CCTACGGACGGATTGTAACAC 58.467 52.381 0.00 0.00 0.00 3.32
351 352 2.533266 CTACGGACGGATTGTAACACC 58.467 52.381 0.00 0.00 0.00 4.16
352 353 0.680618 ACGGACGGATTGTAACACCA 59.319 50.000 0.00 0.00 0.00 4.17
353 354 1.276989 ACGGACGGATTGTAACACCAT 59.723 47.619 0.00 0.00 0.00 3.55
354 355 1.663643 CGGACGGATTGTAACACCATG 59.336 52.381 0.00 0.00 0.00 3.66
355 356 2.675603 CGGACGGATTGTAACACCATGA 60.676 50.000 0.00 0.00 0.00 3.07
356 357 3.541632 GGACGGATTGTAACACCATGAT 58.458 45.455 0.00 0.00 0.00 2.45
357 358 3.945285 GGACGGATTGTAACACCATGATT 59.055 43.478 0.00 0.00 0.00 2.57
358 359 5.120399 GGACGGATTGTAACACCATGATTA 58.880 41.667 0.00 0.00 0.00 1.75
359 360 5.763204 GGACGGATTGTAACACCATGATTAT 59.237 40.000 0.00 0.00 0.00 1.28
360 361 6.073222 GGACGGATTGTAACACCATGATTATC 60.073 42.308 0.00 0.00 0.00 1.75
361 362 6.353323 ACGGATTGTAACACCATGATTATCA 58.647 36.000 0.00 0.00 0.00 2.15
362 363 6.826231 ACGGATTGTAACACCATGATTATCAA 59.174 34.615 0.00 0.00 0.00 2.57
363 364 7.502226 ACGGATTGTAACACCATGATTATCAAT 59.498 33.333 0.00 3.83 0.00 2.57
364 365 8.352201 CGGATTGTAACACCATGATTATCAATT 58.648 33.333 0.00 0.00 0.00 2.32
385 386 9.567776 TCAATTAATAAAGCTCCCATATTTCGA 57.432 29.630 0.00 0.00 0.00 3.71
386 387 9.612620 CAATTAATAAAGCTCCCATATTTCGAC 57.387 33.333 0.00 0.00 0.00 4.20
387 388 5.924475 AATAAAGCTCCCATATTTCGACG 57.076 39.130 0.00 0.00 0.00 5.12
388 389 1.583054 AAGCTCCCATATTTCGACGC 58.417 50.000 0.00 0.00 0.00 5.19
389 390 0.464036 AGCTCCCATATTTCGACGCA 59.536 50.000 0.00 0.00 0.00 5.24
390 391 1.134521 AGCTCCCATATTTCGACGCAA 60.135 47.619 0.00 0.00 0.00 4.85
391 392 1.668751 GCTCCCATATTTCGACGCAAA 59.331 47.619 0.00 0.00 0.00 3.68
392 393 2.096819 GCTCCCATATTTCGACGCAAAA 59.903 45.455 0.00 0.00 0.00 2.44
393 394 3.426963 GCTCCCATATTTCGACGCAAAAA 60.427 43.478 0.00 0.00 0.00 1.94
431 432 3.692406 GTTCGCCCCTCACCGACT 61.692 66.667 0.00 0.00 32.60 4.18
432 433 3.379445 TTCGCCCCTCACCGACTC 61.379 66.667 0.00 0.00 32.60 3.36
433 434 3.881019 TTCGCCCCTCACCGACTCT 62.881 63.158 0.00 0.00 32.60 3.24
434 435 3.382832 CGCCCCTCACCGACTCTT 61.383 66.667 0.00 0.00 0.00 2.85
435 436 2.050350 CGCCCCTCACCGACTCTTA 61.050 63.158 0.00 0.00 0.00 2.10
436 437 1.392710 CGCCCCTCACCGACTCTTAT 61.393 60.000 0.00 0.00 0.00 1.73
437 438 0.831307 GCCCCTCACCGACTCTTATT 59.169 55.000 0.00 0.00 0.00 1.40
438 439 1.473434 GCCCCTCACCGACTCTTATTG 60.473 57.143 0.00 0.00 0.00 1.90
439 440 1.831736 CCCCTCACCGACTCTTATTGT 59.168 52.381 0.00 0.00 0.00 2.71
440 441 2.236395 CCCCTCACCGACTCTTATTGTT 59.764 50.000 0.00 0.00 0.00 2.83
441 442 3.262420 CCCTCACCGACTCTTATTGTTG 58.738 50.000 0.00 0.00 0.00 3.33
442 443 3.306780 CCCTCACCGACTCTTATTGTTGT 60.307 47.826 0.00 0.00 0.00 3.32
443 444 3.679980 CCTCACCGACTCTTATTGTTGTG 59.320 47.826 0.00 0.00 0.00 3.33
444 445 4.307432 CTCACCGACTCTTATTGTTGTGT 58.693 43.478 0.00 0.00 0.00 3.72
445 446 4.699637 TCACCGACTCTTATTGTTGTGTT 58.300 39.130 0.00 0.00 0.00 3.32
446 447 5.120399 TCACCGACTCTTATTGTTGTGTTT 58.880 37.500 0.00 0.00 0.00 2.83
447 448 5.007234 TCACCGACTCTTATTGTTGTGTTTG 59.993 40.000 0.00 0.00 0.00 2.93
448 449 5.007234 CACCGACTCTTATTGTTGTGTTTGA 59.993 40.000 0.00 0.00 0.00 2.69
449 450 5.763204 ACCGACTCTTATTGTTGTGTTTGAT 59.237 36.000 0.00 0.00 0.00 2.57
461 462 6.000840 TGTTGTGTTTGATAAGCACATAGGA 58.999 36.000 11.10 0.00 41.86 2.94
462 463 6.072728 TGTTGTGTTTGATAAGCACATAGGAC 60.073 38.462 11.10 7.71 41.86 3.85
469 470 6.896021 TGATAAGCACATAGGACTAGTACC 57.104 41.667 0.00 2.33 0.00 3.34
475 476 2.442502 ACATAGGACTAGTACCGAGCCT 59.557 50.000 0.00 2.49 0.00 4.58
479 480 1.736365 GACTAGTACCGAGCCTGCCC 61.736 65.000 0.00 0.00 0.00 5.36
482 483 2.808761 TAGTACCGAGCCTGCCCCAA 62.809 60.000 0.00 0.00 0.00 4.12
500 501 0.106918 AAGCAGGTTGTGGTTTCGGA 60.107 50.000 0.00 0.00 44.72 4.55
520 521 0.593128 CGTCAAAACAGAGGCCCTTG 59.407 55.000 0.00 0.00 0.00 3.61
533 534 1.632589 GCCCTTGAACCTGGAATGTT 58.367 50.000 0.00 0.00 0.00 2.71
534 535 1.273327 GCCCTTGAACCTGGAATGTTG 59.727 52.381 0.00 0.00 0.00 3.33
535 536 2.597455 CCCTTGAACCTGGAATGTTGT 58.403 47.619 0.00 0.00 0.00 3.32
536 537 2.965147 CCCTTGAACCTGGAATGTTGTT 59.035 45.455 0.00 0.00 0.00 2.83
537 538 3.387699 CCCTTGAACCTGGAATGTTGTTT 59.612 43.478 0.00 0.00 0.00 2.83
538 539 4.501400 CCCTTGAACCTGGAATGTTGTTTC 60.501 45.833 0.00 0.00 0.00 2.78
571 572 1.739562 CTGGAGCGAGGTTGACAGC 60.740 63.158 0.00 0.00 0.00 4.40
583 584 0.764369 TTGACAGCTCACTCCCACCT 60.764 55.000 0.00 0.00 0.00 4.00
609 610 1.830279 TCGTACGGATCTTGGTGACT 58.170 50.000 16.52 0.00 0.00 3.41
611 612 1.531264 CGTACGGATCTTGGTGACTCG 60.531 57.143 7.57 0.00 0.00 4.18
868 883 3.253432 ACATGGACGAAAAGCTTTTCCTC 59.747 43.478 34.88 31.47 42.66 3.71
869 884 1.871039 TGGACGAAAAGCTTTTCCTCG 59.129 47.619 34.88 29.17 42.66 4.63
870 885 2.140717 GGACGAAAAGCTTTTCCTCGA 58.859 47.619 34.88 0.00 42.66 4.04
871 886 2.742589 GGACGAAAAGCTTTTCCTCGAT 59.257 45.455 34.88 20.76 42.66 3.59
877 896 0.807496 AGCTTTTCCTCGATGCAAGC 59.193 50.000 13.16 13.16 40.20 4.01
949 970 1.550976 GTCCTTGTCCTCGATTCCACT 59.449 52.381 0.00 0.00 0.00 4.00
973 1002 2.016165 GCGCGCCAAGAAAACCAAG 61.016 57.895 23.24 0.00 0.00 3.61
995 1024 3.441244 CAACCGCTGCTGATACTCA 57.559 52.632 0.00 0.00 0.00 3.41
1048 1083 2.038975 CCGTGGGGAGGAGGAAGA 59.961 66.667 0.00 0.00 34.06 2.87
1116 1151 4.796231 GTCCACACGCGCCTCGAT 62.796 66.667 5.73 0.00 41.67 3.59
1218 1253 2.048127 GTGCTCGGCGAGTTCCTT 60.048 61.111 34.41 0.00 31.39 3.36
1779 1823 2.999355 GCTTCAGGCTAGAGTTTCACTG 59.001 50.000 0.00 0.00 38.06 3.66
1813 1857 7.719633 TCCATAATACCTTGTAGCCAAAGATTC 59.280 37.037 0.00 0.00 0.00 2.52
1814 1858 7.502226 CCATAATACCTTGTAGCCAAAGATTCA 59.498 37.037 0.00 0.00 0.00 2.57
1819 1863 4.397417 CCTTGTAGCCAAAGATTCAAGAGG 59.603 45.833 0.00 0.00 35.69 3.69
1820 1864 4.908601 TGTAGCCAAAGATTCAAGAGGA 57.091 40.909 0.00 0.00 0.00 3.71
1950 1994 5.046529 TCGATGAGATCTGCTCTAAAAAGC 58.953 41.667 0.00 0.00 44.27 3.51
1957 2001 3.213506 TCTGCTCTAAAAAGCACAAGCA 58.786 40.909 0.00 0.00 47.00 3.91
1993 2038 4.860907 GGCTCAGAAAGAACGTACGATAAA 59.139 41.667 24.41 0.00 0.00 1.40
1999 2044 6.250951 CAGAAAGAACGTACGATAAAGAGACC 59.749 42.308 24.41 0.00 0.00 3.85
2044 2095 7.941795 TTTCTTTAACCTAACTCACTCTTCG 57.058 36.000 0.00 0.00 0.00 3.79
2055 2106 3.815401 ACTCACTCTTCGGTTTTCCATTG 59.185 43.478 0.00 0.00 40.70 2.82
2068 2119 9.011095 TCGGTTTTCCATTGTTAACATATAACA 57.989 29.630 9.56 0.00 40.70 2.41
2069 2120 9.284594 CGGTTTTCCATTGTTAACATATAACAG 57.715 33.333 9.56 5.90 37.99 3.16
2070 2121 9.083080 GGTTTTCCATTGTTAACATATAACAGC 57.917 33.333 9.56 1.97 38.00 4.40
2071 2122 9.632807 GTTTTCCATTGTTAACATATAACAGCA 57.367 29.630 9.56 0.00 38.47 4.41
2074 2125 8.978874 TCCATTGTTAACATATAACAGCATCT 57.021 30.769 9.56 0.00 38.47 2.90
2075 2126 9.056005 TCCATTGTTAACATATAACAGCATCTC 57.944 33.333 9.56 0.00 38.47 2.75
2076 2127 8.292448 CCATTGTTAACATATAACAGCATCTCC 58.708 37.037 9.56 0.00 38.47 3.71
2077 2128 8.839343 CATTGTTAACATATAACAGCATCTCCA 58.161 33.333 9.56 0.00 38.47 3.86
2078 2129 8.800370 TTGTTAACATATAACAGCATCTCCAA 57.200 30.769 9.56 0.00 38.47 3.53
2079 2130 8.208718 TGTTAACATATAACAGCATCTCCAAC 57.791 34.615 3.59 0.00 33.05 3.77
2080 2131 7.826744 TGTTAACATATAACAGCATCTCCAACA 59.173 33.333 3.59 0.00 33.05 3.33
2081 2132 6.932356 AACATATAACAGCATCTCCAACAG 57.068 37.500 0.00 0.00 0.00 3.16
2082 2133 4.818546 ACATATAACAGCATCTCCAACAGC 59.181 41.667 0.00 0.00 0.00 4.40
2083 2134 2.113860 TAACAGCATCTCCAACAGCC 57.886 50.000 0.00 0.00 0.00 4.85
2084 2135 0.957395 AACAGCATCTCCAACAGCCG 60.957 55.000 0.00 0.00 0.00 5.52
2085 2136 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
2086 2137 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
2087 2138 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
2092 2143 4.277593 CCAACAGCCGCGCCAAAA 62.278 61.111 0.00 0.00 0.00 2.44
2093 2144 2.730604 CAACAGCCGCGCCAAAAG 60.731 61.111 0.00 0.00 0.00 2.27
2094 2145 2.904866 AACAGCCGCGCCAAAAGA 60.905 55.556 0.00 0.00 0.00 2.52
2095 2146 3.194272 AACAGCCGCGCCAAAAGAC 62.194 57.895 0.00 0.00 0.00 3.01
2096 2147 4.741781 CAGCCGCGCCAAAAGACG 62.742 66.667 0.00 0.00 0.00 4.18
2112 2163 4.879686 CGCGCGCGGGGTAAAATG 62.880 66.667 43.28 13.53 35.56 2.32
2113 2164 4.546296 GCGCGCGGGGTAAAATGG 62.546 66.667 33.06 0.00 0.00 3.16
2114 2165 3.128845 CGCGCGGGGTAAAATGGT 61.129 61.111 24.84 0.00 0.00 3.55
2168 2220 7.710676 TTTATAGATAAAGCAACTGCCCAAA 57.289 32.000 0.00 0.00 43.38 3.28
2277 2365 7.886338 ACTCAACAAGCCCTTAAAAAGATAAG 58.114 34.615 0.00 0.00 33.54 1.73
2473 2562 0.608130 AAGATGGCGTCAGTAGCACA 59.392 50.000 9.78 0.00 36.08 4.57
2489 2578 0.905357 CACATCGGAGAGGGACCTTT 59.095 55.000 0.00 0.00 45.68 3.11
2573 2667 1.215647 GATATGGCGGTAGCGAGGG 59.784 63.158 20.16 0.00 46.35 4.30
2604 2699 1.474077 GGATTTCCGCAAGCAAGTCAT 59.526 47.619 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.219773 TCCCTTCCCGTAGAGCTAGA 58.780 55.000 0.00 0.00 0.00 2.43
1 2 1.889829 CATCCCTTCCCGTAGAGCTAG 59.110 57.143 0.00 0.00 0.00 3.42
2 3 1.497716 TCATCCCTTCCCGTAGAGCTA 59.502 52.381 0.00 0.00 0.00 3.32
3 4 0.261991 TCATCCCTTCCCGTAGAGCT 59.738 55.000 0.00 0.00 0.00 4.09
4 5 1.343069 ATCATCCCTTCCCGTAGAGC 58.657 55.000 0.00 0.00 0.00 4.09
6 7 4.523083 CAAAAATCATCCCTTCCCGTAGA 58.477 43.478 0.00 0.00 0.00 2.59
7 8 3.066760 GCAAAAATCATCCCTTCCCGTAG 59.933 47.826 0.00 0.00 0.00 3.51
8 9 3.020984 GCAAAAATCATCCCTTCCCGTA 58.979 45.455 0.00 0.00 0.00 4.02
9 10 1.824852 GCAAAAATCATCCCTTCCCGT 59.175 47.619 0.00 0.00 0.00 5.28
10 11 2.099756 GAGCAAAAATCATCCCTTCCCG 59.900 50.000 0.00 0.00 0.00 5.14
11 12 3.099141 TGAGCAAAAATCATCCCTTCCC 58.901 45.455 0.00 0.00 0.00 3.97
12 13 3.429960 GCTGAGCAAAAATCATCCCTTCC 60.430 47.826 0.00 0.00 0.00 3.46
13 14 3.446516 AGCTGAGCAAAAATCATCCCTTC 59.553 43.478 7.39 0.00 0.00 3.46
14 15 3.438183 AGCTGAGCAAAAATCATCCCTT 58.562 40.909 7.39 0.00 0.00 3.95
15 16 3.097342 AGCTGAGCAAAAATCATCCCT 57.903 42.857 7.39 0.00 0.00 4.20
16 17 3.733077 CGAAGCTGAGCAAAAATCATCCC 60.733 47.826 7.39 0.00 0.00 3.85
17 18 3.119708 ACGAAGCTGAGCAAAAATCATCC 60.120 43.478 7.39 0.00 0.00 3.51
18 19 3.850273 CACGAAGCTGAGCAAAAATCATC 59.150 43.478 7.39 0.00 0.00 2.92
19 20 3.366679 CCACGAAGCTGAGCAAAAATCAT 60.367 43.478 7.39 0.00 0.00 2.45
20 21 2.030893 CCACGAAGCTGAGCAAAAATCA 60.031 45.455 7.39 0.00 0.00 2.57
21 22 2.030805 ACCACGAAGCTGAGCAAAAATC 60.031 45.455 7.39 0.00 0.00 2.17
22 23 1.956477 ACCACGAAGCTGAGCAAAAAT 59.044 42.857 7.39 0.00 0.00 1.82
23 24 1.388547 ACCACGAAGCTGAGCAAAAA 58.611 45.000 7.39 0.00 0.00 1.94
24 25 1.388547 AACCACGAAGCTGAGCAAAA 58.611 45.000 7.39 0.00 0.00 2.44
25 26 1.333619 GAAACCACGAAGCTGAGCAAA 59.666 47.619 7.39 0.00 0.00 3.68
26 27 0.944386 GAAACCACGAAGCTGAGCAA 59.056 50.000 7.39 0.00 0.00 3.91
27 28 0.106708 AGAAACCACGAAGCTGAGCA 59.893 50.000 7.39 0.00 0.00 4.26
28 29 0.793250 GAGAAACCACGAAGCTGAGC 59.207 55.000 0.00 0.00 0.00 4.26
29 30 1.795286 GTGAGAAACCACGAAGCTGAG 59.205 52.381 0.00 0.00 0.00 3.35
30 31 1.138069 TGTGAGAAACCACGAAGCTGA 59.862 47.619 0.00 0.00 39.80 4.26
31 32 1.581934 TGTGAGAAACCACGAAGCTG 58.418 50.000 0.00 0.00 39.80 4.24
32 33 2.146342 CATGTGAGAAACCACGAAGCT 58.854 47.619 0.00 0.00 39.80 3.74
33 34 1.873591 ACATGTGAGAAACCACGAAGC 59.126 47.619 0.00 0.00 39.80 3.86
34 35 3.130633 TCACATGTGAGAAACCACGAAG 58.869 45.455 24.56 0.00 39.80 3.79
35 36 3.186702 TCACATGTGAGAAACCACGAA 57.813 42.857 24.56 0.00 39.80 3.85
36 37 2.900716 TCACATGTGAGAAACCACGA 57.099 45.000 24.56 0.00 39.80 4.35
37 38 5.447683 CCATTATCACATGTGAGAAACCACG 60.448 44.000 32.69 20.19 42.98 4.94
38 39 5.647658 TCCATTATCACATGTGAGAAACCAC 59.352 40.000 32.69 0.00 42.98 4.16
39 40 5.814481 TCCATTATCACATGTGAGAAACCA 58.186 37.500 32.69 19.26 42.98 3.67
40 41 5.297776 CCTCCATTATCACATGTGAGAAACC 59.702 44.000 32.69 0.00 42.98 3.27
41 42 5.882557 ACCTCCATTATCACATGTGAGAAAC 59.117 40.000 32.69 0.00 42.98 2.78
42 43 6.065976 ACCTCCATTATCACATGTGAGAAA 57.934 37.500 32.69 26.95 42.98 2.52
43 44 5.698741 ACCTCCATTATCACATGTGAGAA 57.301 39.130 31.60 31.60 43.73 2.87
44 45 5.189539 TCAACCTCCATTATCACATGTGAGA 59.810 40.000 30.63 25.20 43.61 3.27
45 46 5.295292 GTCAACCTCCATTATCACATGTGAG 59.705 44.000 30.63 18.17 43.61 3.51
46 47 5.045651 AGTCAACCTCCATTATCACATGTGA 60.046 40.000 29.67 29.67 44.59 3.58
47 48 5.065602 CAGTCAACCTCCATTATCACATGTG 59.934 44.000 20.18 20.18 0.00 3.21
48 49 5.188434 CAGTCAACCTCCATTATCACATGT 58.812 41.667 0.00 0.00 0.00 3.21
49 50 5.188434 ACAGTCAACCTCCATTATCACATG 58.812 41.667 0.00 0.00 0.00 3.21
50 51 5.045651 TGACAGTCAACCTCCATTATCACAT 60.046 40.000 0.00 0.00 0.00 3.21
51 52 4.285775 TGACAGTCAACCTCCATTATCACA 59.714 41.667 0.00 0.00 0.00 3.58
52 53 4.832248 TGACAGTCAACCTCCATTATCAC 58.168 43.478 0.00 0.00 0.00 3.06
53 54 4.080919 CCTGACAGTCAACCTCCATTATCA 60.081 45.833 4.41 0.00 0.00 2.15
54 55 4.162320 TCCTGACAGTCAACCTCCATTATC 59.838 45.833 4.41 0.00 0.00 1.75
55 56 4.104086 TCCTGACAGTCAACCTCCATTAT 58.896 43.478 4.41 0.00 0.00 1.28
56 57 3.516586 TCCTGACAGTCAACCTCCATTA 58.483 45.455 4.41 0.00 0.00 1.90
57 58 2.338809 TCCTGACAGTCAACCTCCATT 58.661 47.619 4.41 0.00 0.00 3.16
58 59 2.030027 TCCTGACAGTCAACCTCCAT 57.970 50.000 4.41 0.00 0.00 3.41
59 60 1.902508 GATCCTGACAGTCAACCTCCA 59.097 52.381 4.41 0.00 0.00 3.86
60 61 2.093764 CAGATCCTGACAGTCAACCTCC 60.094 54.545 4.41 0.00 32.44 4.30
61 62 2.093764 CCAGATCCTGACAGTCAACCTC 60.094 54.545 4.41 1.65 32.44 3.85
62 63 1.905215 CCAGATCCTGACAGTCAACCT 59.095 52.381 4.41 0.00 32.44 3.50
63 64 1.625818 ACCAGATCCTGACAGTCAACC 59.374 52.381 4.41 0.00 32.44 3.77
64 65 3.409026 AACCAGATCCTGACAGTCAAC 57.591 47.619 4.41 0.00 32.44 3.18
65 66 4.262894 GGTTAACCAGATCCTGACAGTCAA 60.263 45.833 20.12 0.00 32.44 3.18
66 67 3.260884 GGTTAACCAGATCCTGACAGTCA 59.739 47.826 20.12 2.48 32.44 3.41
67 68 3.515901 AGGTTAACCAGATCCTGACAGTC 59.484 47.826 26.26 0.00 38.89 3.51
68 69 3.515901 GAGGTTAACCAGATCCTGACAGT 59.484 47.826 26.26 0.40 38.89 3.55
69 70 3.772025 AGAGGTTAACCAGATCCTGACAG 59.228 47.826 26.26 0.00 38.89 3.51
70 71 3.791320 AGAGGTTAACCAGATCCTGACA 58.209 45.455 26.26 0.00 38.89 3.58
71 72 5.202004 TCTAGAGGTTAACCAGATCCTGAC 58.798 45.833 26.26 6.16 38.89 3.51
72 73 5.467668 TCTAGAGGTTAACCAGATCCTGA 57.532 43.478 26.26 12.49 38.89 3.86
73 74 5.659079 ACTTCTAGAGGTTAACCAGATCCTG 59.341 44.000 26.26 13.12 38.89 3.86
74 75 5.844601 ACTTCTAGAGGTTAACCAGATCCT 58.155 41.667 26.26 15.60 38.89 3.24
75 76 5.221087 CGACTTCTAGAGGTTAACCAGATCC 60.221 48.000 26.26 9.63 38.89 3.36
76 77 5.733937 GCGACTTCTAGAGGTTAACCAGATC 60.734 48.000 26.26 14.99 38.89 2.75
77 78 4.098196 GCGACTTCTAGAGGTTAACCAGAT 59.902 45.833 26.26 13.53 38.89 2.90
78 79 3.442977 GCGACTTCTAGAGGTTAACCAGA 59.557 47.826 26.26 16.98 38.89 3.86
79 80 3.731264 CGCGACTTCTAGAGGTTAACCAG 60.731 52.174 26.26 14.94 38.89 4.00
80 81 2.163010 CGCGACTTCTAGAGGTTAACCA 59.837 50.000 26.26 5.18 38.89 3.67
81 82 2.795117 CGCGACTTCTAGAGGTTAACC 58.205 52.381 17.41 17.41 0.00 2.85
82 83 2.183636 GCGCGACTTCTAGAGGTTAAC 58.816 52.381 12.10 0.00 0.00 2.01
83 84 1.202110 CGCGCGACTTCTAGAGGTTAA 60.202 52.381 28.94 0.00 0.00 2.01
84 85 0.376152 CGCGCGACTTCTAGAGGTTA 59.624 55.000 28.94 0.00 0.00 2.85
85 86 1.136984 CGCGCGACTTCTAGAGGTT 59.863 57.895 28.94 0.00 0.00 3.50
86 87 2.762234 CCGCGCGACTTCTAGAGGT 61.762 63.158 34.63 7.31 0.00 3.85
87 88 2.024871 CCGCGCGACTTCTAGAGG 59.975 66.667 34.63 6.11 0.00 3.69
88 89 2.652496 GCCGCGCGACTTCTAGAG 60.652 66.667 34.63 12.35 0.00 2.43
89 90 2.985117 TTGCCGCGCGACTTCTAGA 61.985 57.895 34.63 0.00 0.00 2.43
90 91 2.506217 TTGCCGCGCGACTTCTAG 60.506 61.111 34.63 14.03 0.00 2.43
91 92 2.807895 GTTGCCGCGCGACTTCTA 60.808 61.111 34.63 11.16 39.63 2.10
96 97 2.938539 ATCTAGAGTTGCCGCGCGAC 62.939 60.000 34.63 23.04 42.78 5.19
97 98 2.663630 GATCTAGAGTTGCCGCGCGA 62.664 60.000 34.63 9.90 0.00 5.87
98 99 2.278857 ATCTAGAGTTGCCGCGCG 60.279 61.111 25.67 25.67 0.00 6.86
99 100 1.066587 AGATCTAGAGTTGCCGCGC 59.933 57.895 0.00 0.00 0.00 6.86
100 101 0.101399 ACAGATCTAGAGTTGCCGCG 59.899 55.000 0.00 0.00 0.00 6.46
101 102 1.929836 CAACAGATCTAGAGTTGCCGC 59.070 52.381 10.46 0.00 36.59 6.53
105 106 2.602211 CGCTGCAACAGATCTAGAGTTG 59.398 50.000 16.34 16.34 44.01 3.16
106 107 2.886081 CGCTGCAACAGATCTAGAGTT 58.114 47.619 0.00 0.00 32.44 3.01
107 108 1.470632 GCGCTGCAACAGATCTAGAGT 60.471 52.381 0.00 0.00 32.44 3.24
108 109 1.207390 GCGCTGCAACAGATCTAGAG 58.793 55.000 0.00 0.00 32.44 2.43
109 110 0.179100 GGCGCTGCAACAGATCTAGA 60.179 55.000 7.64 0.00 32.44 2.43
110 111 0.179089 AGGCGCTGCAACAGATCTAG 60.179 55.000 7.64 0.00 32.44 2.43
111 112 1.111277 TAGGCGCTGCAACAGATCTA 58.889 50.000 7.64 0.00 32.44 1.98
112 113 0.467384 ATAGGCGCTGCAACAGATCT 59.533 50.000 7.64 0.00 32.44 2.75
113 114 0.864455 GATAGGCGCTGCAACAGATC 59.136 55.000 7.64 0.00 32.44 2.75
114 115 0.467384 AGATAGGCGCTGCAACAGAT 59.533 50.000 7.64 0.00 32.44 2.90
115 116 0.250234 AAGATAGGCGCTGCAACAGA 59.750 50.000 7.64 0.00 32.44 3.41
116 117 0.376152 CAAGATAGGCGCTGCAACAG 59.624 55.000 7.64 0.00 34.12 3.16
117 118 0.036483 TCAAGATAGGCGCTGCAACA 60.036 50.000 7.64 0.00 0.00 3.33
118 119 0.375106 GTCAAGATAGGCGCTGCAAC 59.625 55.000 7.64 0.00 0.00 4.17
119 120 0.250234 AGTCAAGATAGGCGCTGCAA 59.750 50.000 7.64 0.00 0.00 4.08
120 121 0.460811 CAGTCAAGATAGGCGCTGCA 60.461 55.000 7.64 0.00 0.00 4.41
121 122 0.179100 TCAGTCAAGATAGGCGCTGC 60.179 55.000 7.64 0.00 0.00 5.25
122 123 1.135915 ACTCAGTCAAGATAGGCGCTG 59.864 52.381 7.64 0.00 0.00 5.18
123 124 1.479709 ACTCAGTCAAGATAGGCGCT 58.520 50.000 7.64 0.00 0.00 5.92
124 125 2.301577 AACTCAGTCAAGATAGGCGC 57.698 50.000 0.00 0.00 0.00 6.53
125 126 3.243569 CCCTAACTCAGTCAAGATAGGCG 60.244 52.174 2.60 0.00 39.35 5.52
126 127 3.070302 CCCCTAACTCAGTCAAGATAGGC 59.930 52.174 2.60 0.00 39.35 3.93
127 128 4.547671 TCCCCTAACTCAGTCAAGATAGG 58.452 47.826 1.40 1.40 40.01 2.57
128 129 5.450453 TCTCCCCTAACTCAGTCAAGATAG 58.550 45.833 0.00 0.00 0.00 2.08
129 130 5.467668 TCTCCCCTAACTCAGTCAAGATA 57.532 43.478 0.00 0.00 0.00 1.98
130 131 4.338795 TCTCCCCTAACTCAGTCAAGAT 57.661 45.455 0.00 0.00 0.00 2.40
131 132 3.827817 TCTCCCCTAACTCAGTCAAGA 57.172 47.619 0.00 0.00 0.00 3.02
132 133 5.659079 ACTAATCTCCCCTAACTCAGTCAAG 59.341 44.000 0.00 0.00 0.00 3.02
133 134 5.422331 CACTAATCTCCCCTAACTCAGTCAA 59.578 44.000 0.00 0.00 0.00 3.18
134 135 4.956700 CACTAATCTCCCCTAACTCAGTCA 59.043 45.833 0.00 0.00 0.00 3.41
135 136 4.202172 GCACTAATCTCCCCTAACTCAGTC 60.202 50.000 0.00 0.00 0.00 3.51
136 137 3.707102 GCACTAATCTCCCCTAACTCAGT 59.293 47.826 0.00 0.00 0.00 3.41
137 138 3.964031 AGCACTAATCTCCCCTAACTCAG 59.036 47.826 0.00 0.00 0.00 3.35
138 139 3.995636 AGCACTAATCTCCCCTAACTCA 58.004 45.455 0.00 0.00 0.00 3.41
139 140 5.141910 ACTAGCACTAATCTCCCCTAACTC 58.858 45.833 0.00 0.00 0.00 3.01
140 141 5.145513 ACTAGCACTAATCTCCCCTAACT 57.854 43.478 0.00 0.00 0.00 2.24
141 142 5.873146 AACTAGCACTAATCTCCCCTAAC 57.127 43.478 0.00 0.00 0.00 2.34
142 143 6.650120 CAAAACTAGCACTAATCTCCCCTAA 58.350 40.000 0.00 0.00 0.00 2.69
143 144 5.396436 GCAAAACTAGCACTAATCTCCCCTA 60.396 44.000 0.00 0.00 0.00 3.53
144 145 4.626529 GCAAAACTAGCACTAATCTCCCCT 60.627 45.833 0.00 0.00 0.00 4.79
145 146 3.628032 GCAAAACTAGCACTAATCTCCCC 59.372 47.826 0.00 0.00 0.00 4.81
146 147 4.518249 AGCAAAACTAGCACTAATCTCCC 58.482 43.478 0.00 0.00 0.00 4.30
147 148 5.877564 AGAAGCAAAACTAGCACTAATCTCC 59.122 40.000 0.00 0.00 0.00 3.71
148 149 6.976636 AGAAGCAAAACTAGCACTAATCTC 57.023 37.500 0.00 0.00 0.00 2.75
149 150 7.663493 AGAAAGAAGCAAAACTAGCACTAATCT 59.337 33.333 0.00 0.00 0.00 2.40
150 151 7.811653 AGAAAGAAGCAAAACTAGCACTAATC 58.188 34.615 0.00 0.00 0.00 1.75
151 152 7.663493 AGAGAAAGAAGCAAAACTAGCACTAAT 59.337 33.333 0.00 0.00 0.00 1.73
152 153 6.992715 AGAGAAAGAAGCAAAACTAGCACTAA 59.007 34.615 0.00 0.00 0.00 2.24
153 154 6.425114 CAGAGAAAGAAGCAAAACTAGCACTA 59.575 38.462 0.00 0.00 0.00 2.74
154 155 5.238214 CAGAGAAAGAAGCAAAACTAGCACT 59.762 40.000 0.00 0.00 0.00 4.40
155 156 5.008118 ACAGAGAAAGAAGCAAAACTAGCAC 59.992 40.000 0.00 0.00 0.00 4.40
156 157 5.126067 ACAGAGAAAGAAGCAAAACTAGCA 58.874 37.500 0.00 0.00 0.00 3.49
157 158 5.681337 ACAGAGAAAGAAGCAAAACTAGC 57.319 39.130 0.00 0.00 0.00 3.42
158 159 7.308049 GGGTAACAGAGAAAGAAGCAAAACTAG 60.308 40.741 0.00 0.00 39.74 2.57
159 160 6.485648 GGGTAACAGAGAAAGAAGCAAAACTA 59.514 38.462 0.00 0.00 39.74 2.24
160 161 5.299531 GGGTAACAGAGAAAGAAGCAAAACT 59.700 40.000 0.00 0.00 39.74 2.66
161 162 5.067283 TGGGTAACAGAGAAAGAAGCAAAAC 59.933 40.000 0.00 0.00 39.74 2.43
162 163 5.197451 TGGGTAACAGAGAAAGAAGCAAAA 58.803 37.500 0.00 0.00 39.74 2.44
163 164 4.787551 TGGGTAACAGAGAAAGAAGCAAA 58.212 39.130 0.00 0.00 39.74 3.68
164 165 4.431416 TGGGTAACAGAGAAAGAAGCAA 57.569 40.909 0.00 0.00 39.74 3.91
165 166 4.202461 ACATGGGTAACAGAGAAAGAAGCA 60.202 41.667 0.00 0.00 39.74 3.91
166 167 4.327680 ACATGGGTAACAGAGAAAGAAGC 58.672 43.478 0.00 0.00 39.74 3.86
167 168 5.551233 TGACATGGGTAACAGAGAAAGAAG 58.449 41.667 0.00 0.00 39.74 2.85
168 169 5.071788 ACTGACATGGGTAACAGAGAAAGAA 59.928 40.000 0.00 0.00 39.74 2.52
169 170 4.593206 ACTGACATGGGTAACAGAGAAAGA 59.407 41.667 0.00 0.00 39.74 2.52
170 171 4.899502 ACTGACATGGGTAACAGAGAAAG 58.100 43.478 0.00 0.00 39.74 2.62
171 172 4.974645 ACTGACATGGGTAACAGAGAAA 57.025 40.909 0.00 0.00 39.74 2.52
172 173 4.466370 CCTACTGACATGGGTAACAGAGAA 59.534 45.833 0.00 0.00 39.74 2.87
173 174 4.023980 CCTACTGACATGGGTAACAGAGA 58.976 47.826 0.00 0.00 39.74 3.10
174 175 3.133003 CCCTACTGACATGGGTAACAGAG 59.867 52.174 0.00 0.00 36.32 3.35
175 176 3.104512 CCCTACTGACATGGGTAACAGA 58.895 50.000 0.00 0.00 36.32 3.41
176 177 3.104512 TCCCTACTGACATGGGTAACAG 58.895 50.000 0.00 0.00 41.58 3.16
177 178 3.104512 CTCCCTACTGACATGGGTAACA 58.895 50.000 0.00 0.00 41.58 2.41
178 179 3.371965 TCTCCCTACTGACATGGGTAAC 58.628 50.000 0.00 0.00 41.58 2.50
179 180 3.769189 TCTCCCTACTGACATGGGTAA 57.231 47.619 0.00 0.00 41.58 2.85
180 181 3.993658 ATCTCCCTACTGACATGGGTA 57.006 47.619 0.00 0.00 41.58 3.69
181 182 2.877154 ATCTCCCTACTGACATGGGT 57.123 50.000 0.00 0.00 41.58 4.51
182 183 5.832539 ATTAATCTCCCTACTGACATGGG 57.167 43.478 0.00 0.00 42.20 4.00
183 184 8.043710 GGAATATTAATCTCCCTACTGACATGG 58.956 40.741 0.00 0.00 0.00 3.66
184 185 7.761704 CGGAATATTAATCTCCCTACTGACATG 59.238 40.741 9.78 0.00 0.00 3.21
185 186 7.093289 CCGGAATATTAATCTCCCTACTGACAT 60.093 40.741 0.00 0.00 0.00 3.06
186 187 6.210784 CCGGAATATTAATCTCCCTACTGACA 59.789 42.308 0.00 0.00 0.00 3.58
187 188 6.631962 CCGGAATATTAATCTCCCTACTGAC 58.368 44.000 0.00 0.00 0.00 3.51
188 189 5.187186 GCCGGAATATTAATCTCCCTACTGA 59.813 44.000 5.05 0.00 0.00 3.41
189 190 5.420409 GCCGGAATATTAATCTCCCTACTG 58.580 45.833 5.05 0.00 0.00 2.74
190 191 4.470304 GGCCGGAATATTAATCTCCCTACT 59.530 45.833 5.05 0.00 0.00 2.57
191 192 4.383880 GGGCCGGAATATTAATCTCCCTAC 60.384 50.000 5.05 2.18 0.00 3.18
192 193 3.778629 GGGCCGGAATATTAATCTCCCTA 59.221 47.826 5.05 0.00 0.00 3.53
193 194 2.576648 GGGCCGGAATATTAATCTCCCT 59.423 50.000 5.05 0.00 0.00 4.20
194 195 2.307686 TGGGCCGGAATATTAATCTCCC 59.692 50.000 5.05 1.17 0.00 4.30
195 196 3.344515 GTGGGCCGGAATATTAATCTCC 58.655 50.000 5.05 6.48 0.00 3.71
196 197 3.244770 TGGTGGGCCGGAATATTAATCTC 60.245 47.826 5.05 0.00 37.67 2.75
197 198 2.714250 TGGTGGGCCGGAATATTAATCT 59.286 45.455 5.05 0.00 37.67 2.40
198 199 3.149005 TGGTGGGCCGGAATATTAATC 57.851 47.619 5.05 0.00 37.67 1.75
199 200 3.603965 TTGGTGGGCCGGAATATTAAT 57.396 42.857 5.05 0.00 37.67 1.40
200 201 3.226777 CATTGGTGGGCCGGAATATTAA 58.773 45.455 5.05 0.00 37.67 1.40
201 202 2.175931 ACATTGGTGGGCCGGAATATTA 59.824 45.455 5.05 0.00 37.67 0.98
202 203 1.063266 ACATTGGTGGGCCGGAATATT 60.063 47.619 5.05 0.00 37.67 1.28
203 204 0.555769 ACATTGGTGGGCCGGAATAT 59.444 50.000 5.05 0.00 37.67 1.28
204 205 0.395036 CACATTGGTGGGCCGGAATA 60.395 55.000 5.05 0.00 41.45 1.75
205 206 1.682005 CACATTGGTGGGCCGGAAT 60.682 57.895 5.05 0.00 41.45 3.01
206 207 2.282816 CACATTGGTGGGCCGGAA 60.283 61.111 5.05 0.00 41.45 4.30
212 213 1.535204 GGGTCTTGCACATTGGTGGG 61.535 60.000 0.00 0.00 45.38 4.61
213 214 0.827089 TGGGTCTTGCACATTGGTGG 60.827 55.000 0.00 0.00 45.38 4.61
215 216 1.259609 CATGGGTCTTGCACATTGGT 58.740 50.000 0.00 0.00 39.67 3.67
216 217 1.259609 ACATGGGTCTTGCACATTGG 58.740 50.000 0.00 0.00 39.67 3.16
217 218 3.507233 ACTAACATGGGTCTTGCACATTG 59.493 43.478 0.00 0.00 39.67 2.82
218 219 3.766545 ACTAACATGGGTCTTGCACATT 58.233 40.909 0.00 0.00 39.67 2.71
219 220 3.439857 ACTAACATGGGTCTTGCACAT 57.560 42.857 0.00 0.00 43.14 3.21
220 221 2.949177 ACTAACATGGGTCTTGCACA 57.051 45.000 0.00 0.00 33.43 4.57
221 222 3.270877 CCTACTAACATGGGTCTTGCAC 58.729 50.000 0.00 0.00 0.00 4.57
222 223 2.238646 CCCTACTAACATGGGTCTTGCA 59.761 50.000 0.00 0.00 36.32 4.08
223 224 2.504175 TCCCTACTAACATGGGTCTTGC 59.496 50.000 0.00 0.00 41.58 4.01
224 225 4.030913 TCTCCCTACTAACATGGGTCTTG 58.969 47.826 0.00 0.00 41.58 3.02
225 226 4.348020 TCTCCCTACTAACATGGGTCTT 57.652 45.455 0.00 0.00 41.58 3.01
226 227 4.561254 ATCTCCCTACTAACATGGGTCT 57.439 45.455 0.00 0.00 41.58 3.85
227 228 6.742559 TTAATCTCCCTACTAACATGGGTC 57.257 41.667 0.00 0.00 41.58 4.46
228 229 8.990693 ATATTAATCTCCCTACTAACATGGGT 57.009 34.615 0.00 0.00 41.58 4.51
229 230 9.892130 GAATATTAATCTCCCTACTAACATGGG 57.108 37.037 0.00 0.00 42.20 4.00
230 231 9.892130 GGAATATTAATCTCCCTACTAACATGG 57.108 37.037 0.00 0.00 0.00 3.66
231 232 9.587772 CGGAATATTAATCTCCCTACTAACATG 57.412 37.037 9.78 0.00 0.00 3.21
232 233 8.759782 CCGGAATATTAATCTCCCTACTAACAT 58.240 37.037 0.00 0.00 0.00 2.71
233 234 7.310237 GCCGGAATATTAATCTCCCTACTAACA 60.310 40.741 5.05 0.00 0.00 2.41
234 235 7.040494 GCCGGAATATTAATCTCCCTACTAAC 58.960 42.308 5.05 0.00 0.00 2.34
235 236 6.155737 GGCCGGAATATTAATCTCCCTACTAA 59.844 42.308 5.05 0.00 0.00 2.24
236 237 5.659971 GGCCGGAATATTAATCTCCCTACTA 59.340 44.000 5.05 0.00 0.00 1.82
237 238 4.470304 GGCCGGAATATTAATCTCCCTACT 59.530 45.833 5.05 0.00 0.00 2.57
238 239 4.383880 GGGCCGGAATATTAATCTCCCTAC 60.384 50.000 5.05 2.18 0.00 3.18
239 240 3.778629 GGGCCGGAATATTAATCTCCCTA 59.221 47.826 5.05 0.00 0.00 3.53
240 241 2.576648 GGGCCGGAATATTAATCTCCCT 59.423 50.000 5.05 0.00 0.00 4.20
241 242 2.307686 TGGGCCGGAATATTAATCTCCC 59.692 50.000 5.05 1.17 0.00 4.30
242 243 3.344515 GTGGGCCGGAATATTAATCTCC 58.655 50.000 5.05 6.48 0.00 3.71
243 244 3.244770 TGGTGGGCCGGAATATTAATCTC 60.245 47.826 5.05 0.00 37.67 2.75
244 245 2.714250 TGGTGGGCCGGAATATTAATCT 59.286 45.455 5.05 0.00 37.67 2.40
245 246 3.149005 TGGTGGGCCGGAATATTAATC 57.851 47.619 5.05 0.00 37.67 1.75
246 247 3.603965 TTGGTGGGCCGGAATATTAAT 57.396 42.857 5.05 0.00 37.67 1.40
247 248 3.226777 CATTGGTGGGCCGGAATATTAA 58.773 45.455 5.05 0.00 37.67 1.40
248 249 2.175931 ACATTGGTGGGCCGGAATATTA 59.824 45.455 5.05 0.00 37.67 0.98
249 250 1.063266 ACATTGGTGGGCCGGAATATT 60.063 47.619 5.05 0.00 37.67 1.28
250 251 0.555769 ACATTGGTGGGCCGGAATAT 59.444 50.000 5.05 0.00 37.67 1.28
251 252 0.395036 CACATTGGTGGGCCGGAATA 60.395 55.000 5.05 0.00 41.45 1.75
252 253 1.682005 CACATTGGTGGGCCGGAAT 60.682 57.895 5.05 0.00 41.45 3.01
253 254 2.282816 CACATTGGTGGGCCGGAA 60.283 61.111 5.05 0.00 41.45 4.30
259 260 1.894466 TGAATCTTGCACATTGGTGGG 59.106 47.619 0.00 0.00 45.38 4.61
260 261 2.821378 TCTGAATCTTGCACATTGGTGG 59.179 45.455 0.00 0.00 45.38 4.61
262 263 3.504906 CACTCTGAATCTTGCACATTGGT 59.495 43.478 0.00 0.00 0.00 3.67
263 264 3.119602 CCACTCTGAATCTTGCACATTGG 60.120 47.826 0.00 0.00 0.00 3.16
264 265 3.754850 TCCACTCTGAATCTTGCACATTG 59.245 43.478 0.00 0.00 0.00 2.82
265 266 3.755378 GTCCACTCTGAATCTTGCACATT 59.245 43.478 0.00 0.00 0.00 2.71
266 267 3.341823 GTCCACTCTGAATCTTGCACAT 58.658 45.455 0.00 0.00 0.00 3.21
267 268 2.771089 GTCCACTCTGAATCTTGCACA 58.229 47.619 0.00 0.00 0.00 4.57
268 269 1.728971 CGTCCACTCTGAATCTTGCAC 59.271 52.381 0.00 0.00 0.00 4.57
269 270 1.338105 CCGTCCACTCTGAATCTTGCA 60.338 52.381 0.00 0.00 0.00 4.08
270 271 1.066858 TCCGTCCACTCTGAATCTTGC 60.067 52.381 0.00 0.00 0.00 4.01
271 272 2.493675 TCTCCGTCCACTCTGAATCTTG 59.506 50.000 0.00 0.00 0.00 3.02
272 273 2.757868 CTCTCCGTCCACTCTGAATCTT 59.242 50.000 0.00 0.00 0.00 2.40
273 274 2.291282 ACTCTCCGTCCACTCTGAATCT 60.291 50.000 0.00 0.00 0.00 2.40
274 275 2.096248 ACTCTCCGTCCACTCTGAATC 58.904 52.381 0.00 0.00 0.00 2.52
275 276 2.223803 ACTCTCCGTCCACTCTGAAT 57.776 50.000 0.00 0.00 0.00 2.57
276 277 1.613925 CAACTCTCCGTCCACTCTGAA 59.386 52.381 0.00 0.00 0.00 3.02
277 278 1.248486 CAACTCTCCGTCCACTCTGA 58.752 55.000 0.00 0.00 0.00 3.27
278 279 0.244994 CCAACTCTCCGTCCACTCTG 59.755 60.000 0.00 0.00 0.00 3.35
279 280 1.536943 GCCAACTCTCCGTCCACTCT 61.537 60.000 0.00 0.00 0.00 3.24
280 281 1.079750 GCCAACTCTCCGTCCACTC 60.080 63.158 0.00 0.00 0.00 3.51
281 282 1.534235 AGCCAACTCTCCGTCCACT 60.534 57.895 0.00 0.00 0.00 4.00
282 283 1.079750 GAGCCAACTCTCCGTCCAC 60.080 63.158 0.00 0.00 40.03 4.02
283 284 2.636412 CGAGCCAACTCTCCGTCCA 61.636 63.158 0.00 0.00 41.09 4.02
284 285 1.668101 ATCGAGCCAACTCTCCGTCC 61.668 60.000 0.00 0.00 41.09 4.79
285 286 0.526524 CATCGAGCCAACTCTCCGTC 60.527 60.000 0.00 0.00 41.09 4.79
286 287 1.251527 ACATCGAGCCAACTCTCCGT 61.252 55.000 0.00 0.00 41.09 4.69
287 288 0.803768 CACATCGAGCCAACTCTCCG 60.804 60.000 0.00 0.00 41.09 4.63
288 289 0.532573 TCACATCGAGCCAACTCTCC 59.467 55.000 0.00 0.00 41.09 3.71
289 290 1.203523 ACTCACATCGAGCCAACTCTC 59.796 52.381 0.00 0.00 46.63 3.20
290 291 1.203523 GACTCACATCGAGCCAACTCT 59.796 52.381 0.00 0.00 46.63 3.24
291 292 1.634702 GACTCACATCGAGCCAACTC 58.365 55.000 0.00 0.00 46.63 3.01
292 293 0.247736 GGACTCACATCGAGCCAACT 59.752 55.000 0.00 0.00 46.63 3.16
293 294 0.247736 AGGACTCACATCGAGCCAAC 59.752 55.000 0.00 0.00 46.63 3.77
294 295 0.247460 CAGGACTCACATCGAGCCAA 59.753 55.000 0.00 0.00 46.63 4.52
295 296 0.611896 TCAGGACTCACATCGAGCCA 60.612 55.000 0.00 0.00 46.63 4.75
296 297 0.179124 GTCAGGACTCACATCGAGCC 60.179 60.000 0.00 0.00 46.63 4.70
297 298 0.814457 AGTCAGGACTCACATCGAGC 59.186 55.000 0.00 0.00 46.63 5.03
299 300 3.057245 CAGAAAGTCAGGACTCACATCGA 60.057 47.826 1.86 0.00 41.58 3.59
300 301 3.249091 CAGAAAGTCAGGACTCACATCG 58.751 50.000 1.86 0.00 41.58 3.84
301 302 2.999355 GCAGAAAGTCAGGACTCACATC 59.001 50.000 1.86 0.37 41.58 3.06
302 303 2.369860 TGCAGAAAGTCAGGACTCACAT 59.630 45.455 1.86 0.00 41.58 3.21
303 304 1.762370 TGCAGAAAGTCAGGACTCACA 59.238 47.619 1.86 0.00 41.58 3.58
304 305 2.533266 TGCAGAAAGTCAGGACTCAC 57.467 50.000 1.86 0.67 41.58 3.51
305 306 2.027745 GGATGCAGAAAGTCAGGACTCA 60.028 50.000 1.86 0.00 41.58 3.41
306 307 2.626840 GGATGCAGAAAGTCAGGACTC 58.373 52.381 1.86 0.00 41.58 3.36
307 308 1.280421 GGGATGCAGAAAGTCAGGACT 59.720 52.381 0.00 0.00 44.94 3.85
308 309 1.280421 AGGGATGCAGAAAGTCAGGAC 59.720 52.381 0.00 0.00 0.00 3.85
309 310 1.280133 CAGGGATGCAGAAAGTCAGGA 59.720 52.381 0.00 0.00 0.00 3.86
310 311 1.747709 CAGGGATGCAGAAAGTCAGG 58.252 55.000 0.00 0.00 0.00 3.86
311 312 1.093159 GCAGGGATGCAGAAAGTCAG 58.907 55.000 0.00 0.00 34.41 3.51
312 313 0.322816 GGCAGGGATGCAGAAAGTCA 60.323 55.000 2.29 0.00 36.33 3.41
313 314 0.034670 AGGCAGGGATGCAGAAAGTC 60.035 55.000 2.29 0.00 36.33 3.01
314 315 1.065126 GTAGGCAGGGATGCAGAAAGT 60.065 52.381 2.29 0.00 36.33 2.66
315 316 1.673168 GTAGGCAGGGATGCAGAAAG 58.327 55.000 2.29 0.00 36.33 2.62
316 317 0.107703 CGTAGGCAGGGATGCAGAAA 60.108 55.000 2.29 0.00 36.33 2.52
317 318 1.522092 CGTAGGCAGGGATGCAGAA 59.478 57.895 2.29 0.00 36.33 3.02
318 319 2.434843 CCGTAGGCAGGGATGCAGA 61.435 63.158 2.29 0.00 46.14 4.26
319 320 2.109799 CCGTAGGCAGGGATGCAG 59.890 66.667 2.29 0.00 46.14 4.41
331 332 2.094597 TGGTGTTACAATCCGTCCGTAG 60.095 50.000 0.00 0.00 0.00 3.51
332 333 1.891811 TGGTGTTACAATCCGTCCGTA 59.108 47.619 0.00 0.00 0.00 4.02
333 334 0.680618 TGGTGTTACAATCCGTCCGT 59.319 50.000 0.00 0.00 0.00 4.69
334 335 1.663643 CATGGTGTTACAATCCGTCCG 59.336 52.381 0.00 0.00 0.00 4.79
335 336 2.980568 TCATGGTGTTACAATCCGTCC 58.019 47.619 0.00 0.00 0.00 4.79
336 337 6.481976 TGATAATCATGGTGTTACAATCCGTC 59.518 38.462 0.00 0.00 0.00 4.79
337 338 6.353323 TGATAATCATGGTGTTACAATCCGT 58.647 36.000 0.00 0.00 0.00 4.69
338 339 6.859420 TGATAATCATGGTGTTACAATCCG 57.141 37.500 0.00 0.00 0.00 4.18
359 360 9.567776 TCGAAATATGGGAGCTTTATTAATTGA 57.432 29.630 0.00 0.00 0.00 2.57
360 361 9.612620 GTCGAAATATGGGAGCTTTATTAATTG 57.387 33.333 0.00 0.00 0.00 2.32
361 362 8.504005 CGTCGAAATATGGGAGCTTTATTAATT 58.496 33.333 0.00 0.00 0.00 1.40
362 363 7.360946 GCGTCGAAATATGGGAGCTTTATTAAT 60.361 37.037 0.00 0.00 0.00 1.40
363 364 6.073440 GCGTCGAAATATGGGAGCTTTATTAA 60.073 38.462 0.00 0.00 0.00 1.40
364 365 5.407387 GCGTCGAAATATGGGAGCTTTATTA 59.593 40.000 0.00 0.00 0.00 0.98
365 366 4.213482 GCGTCGAAATATGGGAGCTTTATT 59.787 41.667 0.00 0.00 0.00 1.40
366 367 3.746492 GCGTCGAAATATGGGAGCTTTAT 59.254 43.478 0.00 0.00 0.00 1.40
367 368 3.128349 GCGTCGAAATATGGGAGCTTTA 58.872 45.455 0.00 0.00 0.00 1.85
368 369 1.940613 GCGTCGAAATATGGGAGCTTT 59.059 47.619 0.00 0.00 0.00 3.51
369 370 1.134521 TGCGTCGAAATATGGGAGCTT 60.135 47.619 0.00 0.00 0.00 3.74
370 371 0.464036 TGCGTCGAAATATGGGAGCT 59.536 50.000 0.00 0.00 0.00 4.09
371 372 1.295792 TTGCGTCGAAATATGGGAGC 58.704 50.000 0.00 0.00 0.00 4.70
372 373 4.349663 TTTTTGCGTCGAAATATGGGAG 57.650 40.909 0.00 0.00 0.00 4.30
414 415 3.644399 GAGTCGGTGAGGGGCGAAC 62.644 68.421 0.00 0.00 0.00 3.95
415 416 3.379445 GAGTCGGTGAGGGGCGAA 61.379 66.667 0.00 0.00 0.00 4.70
416 417 2.488771 TAAGAGTCGGTGAGGGGCGA 62.489 60.000 0.00 0.00 0.00 5.54
417 418 1.392710 ATAAGAGTCGGTGAGGGGCG 61.393 60.000 0.00 0.00 0.00 6.13
418 419 0.831307 AATAAGAGTCGGTGAGGGGC 59.169 55.000 0.00 0.00 0.00 5.80
419 420 1.831736 ACAATAAGAGTCGGTGAGGGG 59.168 52.381 0.00 0.00 0.00 4.79
420 421 3.262420 CAACAATAAGAGTCGGTGAGGG 58.738 50.000 0.00 0.00 0.00 4.30
421 422 3.679980 CACAACAATAAGAGTCGGTGAGG 59.320 47.826 0.00 0.00 0.00 3.86
422 423 4.307432 ACACAACAATAAGAGTCGGTGAG 58.693 43.478 0.00 0.00 32.14 3.51
423 424 4.330944 ACACAACAATAAGAGTCGGTGA 57.669 40.909 0.00 0.00 32.14 4.02
424 425 5.007234 TCAAACACAACAATAAGAGTCGGTG 59.993 40.000 0.00 0.00 33.24 4.94
425 426 5.120399 TCAAACACAACAATAAGAGTCGGT 58.880 37.500 0.00 0.00 0.00 4.69
426 427 5.666969 TCAAACACAACAATAAGAGTCGG 57.333 39.130 0.00 0.00 0.00 4.79
427 428 7.478667 GCTTATCAAACACAACAATAAGAGTCG 59.521 37.037 0.00 0.00 33.66 4.18
428 429 8.289618 TGCTTATCAAACACAACAATAAGAGTC 58.710 33.333 0.00 0.00 33.66 3.36
429 430 8.076178 GTGCTTATCAAACACAACAATAAGAGT 58.924 33.333 0.00 0.00 33.66 3.24
430 431 8.075574 TGTGCTTATCAAACACAACAATAAGAG 58.924 33.333 0.00 0.00 41.11 2.85
431 432 7.935520 TGTGCTTATCAAACACAACAATAAGA 58.064 30.769 0.00 0.00 41.11 2.10
432 433 8.746922 ATGTGCTTATCAAACACAACAATAAG 57.253 30.769 0.00 0.00 46.47 1.73
433 434 9.838975 CTATGTGCTTATCAAACACAACAATAA 57.161 29.630 0.00 0.00 46.47 1.40
434 435 8.458052 CCTATGTGCTTATCAAACACAACAATA 58.542 33.333 0.00 0.00 46.47 1.90
435 436 7.176515 TCCTATGTGCTTATCAAACACAACAAT 59.823 33.333 0.00 0.00 46.47 2.71
436 437 6.488344 TCCTATGTGCTTATCAAACACAACAA 59.512 34.615 0.00 0.00 46.47 2.83
437 438 6.000840 TCCTATGTGCTTATCAAACACAACA 58.999 36.000 0.00 0.00 46.47 3.33
438 439 6.149474 AGTCCTATGTGCTTATCAAACACAAC 59.851 38.462 0.00 0.00 46.47 3.32
439 440 6.237901 AGTCCTATGTGCTTATCAAACACAA 58.762 36.000 0.00 0.00 46.47 3.33
441 442 7.042335 ACTAGTCCTATGTGCTTATCAAACAC 58.958 38.462 0.00 0.00 34.86 3.32
442 443 7.182817 ACTAGTCCTATGTGCTTATCAAACA 57.817 36.000 0.00 0.00 0.00 2.83
443 444 7.652507 GGTACTAGTCCTATGTGCTTATCAAAC 59.347 40.741 0.00 0.00 0.00 2.93
444 445 7.469594 CGGTACTAGTCCTATGTGCTTATCAAA 60.470 40.741 0.00 0.00 0.00 2.69
445 446 6.016527 CGGTACTAGTCCTATGTGCTTATCAA 60.017 42.308 0.00 0.00 0.00 2.57
446 447 5.472478 CGGTACTAGTCCTATGTGCTTATCA 59.528 44.000 0.00 0.00 0.00 2.15
447 448 5.704515 TCGGTACTAGTCCTATGTGCTTATC 59.295 44.000 0.00 0.00 0.00 1.75
448 449 5.628130 TCGGTACTAGTCCTATGTGCTTAT 58.372 41.667 0.00 0.00 0.00 1.73
449 450 5.039920 TCGGTACTAGTCCTATGTGCTTA 57.960 43.478 0.00 0.00 0.00 3.09
461 462 1.757340 GGGCAGGCTCGGTACTAGT 60.757 63.158 0.00 0.00 0.00 2.57
462 463 2.499827 GGGGCAGGCTCGGTACTAG 61.500 68.421 0.00 0.00 0.00 2.57
479 480 0.030638 CGAAACCACAACCTGCTTGG 59.969 55.000 0.00 0.00 42.93 3.61
482 483 0.818040 GTCCGAAACCACAACCTGCT 60.818 55.000 0.00 0.00 0.00 4.24
484 485 0.812412 ACGTCCGAAACCACAACCTG 60.812 55.000 0.00 0.00 0.00 4.00
485 486 0.531311 GACGTCCGAAACCACAACCT 60.531 55.000 3.51 0.00 0.00 3.50
486 487 0.810823 TGACGTCCGAAACCACAACC 60.811 55.000 14.12 0.00 0.00 3.77
487 488 1.008329 TTGACGTCCGAAACCACAAC 58.992 50.000 14.12 0.00 0.00 3.32
488 489 1.735386 TTTGACGTCCGAAACCACAA 58.265 45.000 14.12 0.00 0.00 3.33
489 490 1.397692 GTTTTGACGTCCGAAACCACA 59.602 47.619 23.53 0.00 41.30 4.17
490 491 1.397692 TGTTTTGACGTCCGAAACCAC 59.602 47.619 27.55 14.80 44.76 4.16
500 501 0.182775 AAGGGCCTCTGTTTTGACGT 59.817 50.000 6.46 0.00 0.00 4.34
520 521 2.030274 CCCGAAACAACATTCCAGGTTC 60.030 50.000 0.00 0.00 0.00 3.62
548 549 0.532573 TCAACCTCGCTCCAGTCATC 59.467 55.000 0.00 0.00 0.00 2.92
555 556 1.446966 GAGCTGTCAACCTCGCTCC 60.447 63.158 0.00 0.00 42.20 4.70
571 572 2.556189 CGATGATAGAGGTGGGAGTGAG 59.444 54.545 0.00 0.00 0.00 3.51
583 584 4.215613 CACCAAGATCCGTACGATGATAGA 59.784 45.833 18.76 4.29 0.00 1.98
609 610 1.205657 GAACTGTCAACGTTGCTCGA 58.794 50.000 23.47 3.11 42.86 4.04
611 612 3.545633 GAATGAACTGTCAACGTTGCTC 58.454 45.455 23.47 17.71 37.30 4.26
868 883 3.613952 TTTGCCGCAGCTTGCATCG 62.614 57.895 7.24 0.00 45.36 3.84
869 884 2.090524 GTTTGCCGCAGCTTGCATC 61.091 57.895 7.24 1.79 45.36 3.91
870 885 2.048877 GTTTGCCGCAGCTTGCAT 60.049 55.556 7.24 0.00 45.36 3.96
871 886 4.283403 GGTTTGCCGCAGCTTGCA 62.283 61.111 2.53 2.53 45.36 4.08
920 939 0.759346 AGGACAAGGACGTGAGCTTT 59.241 50.000 0.00 0.00 0.00 3.51
949 970 4.617520 TTCTTGGCGCGCTGGTGA 62.618 61.111 32.29 20.04 0.00 4.02
1034 1069 2.038975 CGGTCTTCCTCCTCCCCA 59.961 66.667 0.00 0.00 0.00 4.96
1071 1106 3.610619 CTGGCAGTGGCACGGATGA 62.611 63.158 22.02 3.03 43.71 2.92
1779 1823 6.073003 GCTACAAGGTATTATGGATGTTCAGC 60.073 42.308 0.00 0.00 0.00 4.26
1813 1857 5.974158 CGTACAGATTCACTATGTCCTCTTG 59.026 44.000 0.00 0.00 0.00 3.02
1814 1858 5.652891 ACGTACAGATTCACTATGTCCTCTT 59.347 40.000 0.00 0.00 0.00 2.85
1819 1863 4.904724 CGCTACGTACAGATTCACTATGTC 59.095 45.833 0.00 0.00 0.00 3.06
1820 1864 4.334759 ACGCTACGTACAGATTCACTATGT 59.665 41.667 0.00 0.00 38.73 2.29
1950 1994 2.605338 CCATCGTGGAACTTTGCTTGTG 60.605 50.000 0.00 0.00 40.96 3.33
1957 2001 1.347707 TCTGAGCCATCGTGGAACTTT 59.652 47.619 8.04 0.00 40.96 2.66
1993 2038 5.245531 TGAGACGCAATAAAAATGGTCTCT 58.754 37.500 16.89 0.00 46.44 3.10
2044 2095 9.083080 GCTGTTATATGTTAACAATGGAAAACC 57.917 33.333 13.23 0.00 37.04 3.27
2055 2106 8.208718 TGTTGGAGATGCTGTTATATGTTAAC 57.791 34.615 0.00 0.00 0.00 2.01
2068 2119 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
2069 2120 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
2070 2121 3.869272 GCGCGGCTGTTGGAGATG 61.869 66.667 8.83 0.00 0.00 2.90
2075 2126 4.277593 TTTTGGCGCGGCTGTTGG 62.278 61.111 33.23 0.00 0.00 3.77
2076 2127 2.730604 CTTTTGGCGCGGCTGTTG 60.731 61.111 33.23 16.78 0.00 3.33
2077 2128 2.904866 TCTTTTGGCGCGGCTGTT 60.905 55.556 33.23 0.00 0.00 3.16
2078 2129 3.660111 GTCTTTTGGCGCGGCTGT 61.660 61.111 33.23 0.00 0.00 4.40
2079 2130 4.741781 CGTCTTTTGGCGCGGCTG 62.742 66.667 33.23 19.47 41.95 4.85
2095 2146 4.879686 CATTTTACCCCGCGCGCG 62.880 66.667 43.73 43.73 39.44 6.86
2096 2147 4.546296 CCATTTTACCCCGCGCGC 62.546 66.667 27.36 23.91 0.00 6.86
2097 2148 2.202703 AAACCATTTTACCCCGCGCG 62.203 55.000 25.67 25.67 0.00 6.86
2098 2149 0.038067 AAAACCATTTTACCCCGCGC 60.038 50.000 0.00 0.00 0.00 6.86
2099 2150 2.442212 AAAAACCATTTTACCCCGCG 57.558 45.000 0.00 0.00 36.99 6.46
2168 2220 3.132111 GTGAACCTTGTTGGATGTTTGGT 59.868 43.478 0.00 0.00 39.71 3.67
2351 2440 0.606096 TTCGTTCGATGGCCTTCTGA 59.394 50.000 16.03 11.84 0.00 3.27
2428 2517 2.368439 TGTGTGGATATTTGCAGCTCC 58.632 47.619 0.00 0.00 0.00 4.70
2473 2562 1.952621 TCAAAAGGTCCCTCTCCGAT 58.047 50.000 0.00 0.00 0.00 4.18
2489 2578 5.153513 GTTCGCAATAAGCTTGTCATTCAA 58.846 37.500 9.86 0.00 42.61 2.69
2573 2667 1.152461 GGAAATCCATGCCTCCCCC 60.152 63.158 0.00 0.00 35.64 5.40



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.