Multiple sequence alignment - TraesCS1B01G200400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G200400 chr1B 100.000 4622 0 0 1 4622 359208520 359213141 0.000000e+00 8536.0
1 TraesCS1B01G200400 chr1B 81.902 326 46 10 4302 4619 552308043 552308363 3.550000e-66 263.0
2 TraesCS1B01G200400 chr1B 96.104 154 4 2 58 211 414090881 414091032 2.760000e-62 250.0
3 TraesCS1B01G200400 chr1B 95.238 147 7 0 4303 4449 359223465 359223319 2.780000e-57 233.0
4 TraesCS1B01G200400 chr1A 92.274 4064 221 42 206 4217 325040496 325036474 0.000000e+00 5679.0
5 TraesCS1B01G200400 chr1D 94.212 2626 98 27 206 2811 253200210 253197619 0.000000e+00 3958.0
6 TraesCS1B01G200400 chr1D 91.593 904 56 9 2813 3715 253197534 253196650 0.000000e+00 1230.0
7 TraesCS1B01G200400 chr1D 90.374 374 24 6 3761 4122 253196649 253196276 8.990000e-132 481.0
8 TraesCS1B01G200400 chr1D 94.595 111 6 0 4107 4217 253194926 253194816 6.150000e-39 172.0
9 TraesCS1B01G200400 chr2B 96.508 315 11 0 4305 4619 225309569 225309883 5.300000e-144 521.0
10 TraesCS1B01G200400 chr2B 97.315 149 3 1 59 207 93696033 93696180 7.680000e-63 252.0
11 TraesCS1B01G200400 chr4B 95.570 316 13 1 4305 4619 622484283 622484598 5.340000e-139 505.0
12 TraesCS1B01G200400 chr4B 81.818 330 45 11 4302 4622 103053453 103053130 3.550000e-66 263.0
13 TraesCS1B01G200400 chr4B 80.851 329 49 11 4302 4622 462209604 462209282 3.570000e-61 246.0
14 TraesCS1B01G200400 chr4B 100.000 57 0 0 1 57 41528159 41528103 6.320000e-19 106.0
15 TraesCS1B01G200400 chr4B 100.000 57 0 0 1 57 63753904 63753848 6.320000e-19 106.0
16 TraesCS1B01G200400 chr6B 94.984 319 15 1 4305 4622 717738581 717738263 2.480000e-137 499.0
17 TraesCS1B01G200400 chr6B 93.671 316 19 1 4303 4617 147887833 147888148 5.410000e-129 472.0
18 TraesCS1B01G200400 chr6B 86.730 211 26 2 1 211 82007594 82007386 2.780000e-57 233.0
19 TraesCS1B01G200400 chr5B 93.103 319 20 2 4305 4622 659547493 659547176 2.520000e-127 466.0
20 TraesCS1B01G200400 chr5B 88.199 322 29 4 4303 4622 649909839 649909525 4.370000e-100 375.0
21 TraesCS1B01G200400 chr5B 85.759 316 30 8 4319 4622 529335059 529334747 2.070000e-83 320.0
22 TraesCS1B01G200400 chr5B 82.371 329 44 11 4302 4622 299600052 299599730 1.640000e-69 274.0
23 TraesCS1B01G200400 chr5B 97.333 150 3 1 58 207 490757560 490757412 2.130000e-63 254.0
24 TraesCS1B01G200400 chr5B 81.346 327 45 13 4302 4619 609605071 609605390 7.680000e-63 252.0
25 TraesCS1B01G200400 chr5B 96.104 154 3 3 59 212 395709915 395709765 9.930000e-62 248.0
26 TraesCS1B01G200400 chr5B 92.262 168 11 2 40 207 547158037 547157872 2.150000e-58 237.0
27 TraesCS1B01G200400 chr5B 84.483 116 14 3 4216 4329 659533231 659533344 1.360000e-20 111.0
28 TraesCS1B01G200400 chr5B 100.000 57 0 0 1 57 685073342 685073286 6.320000e-19 106.0
29 TraesCS1B01G200400 chr5B 89.873 79 6 2 5 83 26643534 26643610 2.940000e-17 100.0
30 TraesCS1B01G200400 chr5B 100.000 28 0 0 4218 4245 683108995 683108968 8.000000e-03 52.8
31 TraesCS1B01G200400 chr3B 92.453 318 23 1 4303 4619 10021971 10022288 1.960000e-123 453.0
32 TraesCS1B01G200400 chr3B 96.689 151 4 1 58 208 23408422 23408571 2.760000e-62 250.0
33 TraesCS1B01G200400 chr3B 85.577 104 13 2 1 104 23390721 23390620 1.760000e-19 108.0
34 TraesCS1B01G200400 chr5D 89.408 321 33 1 4303 4622 387249913 387249593 2.000000e-108 403.0
35 TraesCS1B01G200400 chr5D 89.130 138 15 0 4303 4440 387238991 387239128 6.150000e-39 172.0
36 TraesCS1B01G200400 chr5D 100.000 57 0 0 1 57 539915950 539916006 6.320000e-19 106.0
37 TraesCS1B01G200400 chr4D 88.889 306 32 2 4316 4619 473870119 473870424 4.370000e-100 375.0
38 TraesCS1B01G200400 chr4D 100.000 57 0 0 1 57 230542613 230542557 6.320000e-19 106.0
39 TraesCS1B01G200400 chr7B 88.050 318 35 3 4303 4618 36410877 36411193 1.570000e-99 374.0
40 TraesCS1B01G200400 chr7B 81.763 329 47 10 4302 4622 706456535 706456858 3.550000e-66 263.0
41 TraesCS1B01G200400 chr7B 96.689 151 4 1 58 208 677889381 677889232 2.760000e-62 250.0
42 TraesCS1B01G200400 chr3D 88.406 207 22 2 1 207 445035622 445035418 9.930000e-62 248.0
43 TraesCS1B01G200400 chr3D 80.967 331 42 13 4304 4619 558588319 558588643 4.620000e-60 243.0
44 TraesCS1B01G200400 chr7D 80.539 334 44 13 4304 4622 536969020 536968693 2.150000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G200400 chr1B 359208520 359213141 4621 False 8536.00 8536 100.0000 1 4622 1 chr1B.!!$F1 4621
1 TraesCS1B01G200400 chr1A 325036474 325040496 4022 True 5679.00 5679 92.2740 206 4217 1 chr1A.!!$R1 4011
2 TraesCS1B01G200400 chr1D 253194816 253200210 5394 True 1460.25 3958 92.6935 206 4217 4 chr1D.!!$R1 4011

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
451 453 0.323302 TCAGCGGCAGTTAACATCCA 59.677 50.0 8.61 0.0 0.00 3.41 F
1308 1327 0.173935 TGACAAGTGTTCGTCGTGGT 59.826 50.0 0.00 0.0 34.78 4.16 F
2515 2545 0.178981 AGGCTCTGCTTCTTTGGCAA 60.179 50.0 0.00 0.0 39.30 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1376 1395 1.062148 GGCGAACTTGTTTATCTCCGC 59.938 52.381 0.00 0.0 40.54 5.54 R
2608 2639 1.228245 GACAGCAAACTCAGGGCCA 60.228 57.895 6.18 0.0 0.00 5.36 R
4485 5990 0.036294 GAGGAGGAAGAACGGGTTGG 60.036 60.000 0.00 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
24 25 4.404394 ACATCCGTATGTGGTTCATAGTGA 59.596 41.667 0.00 0.00 44.79 3.41
25 26 5.105106 ACATCCGTATGTGGTTCATAGTGAA 60.105 40.000 0.00 0.00 44.79 3.18
26 27 5.408880 TCCGTATGTGGTTCATAGTGAAA 57.591 39.130 0.00 0.00 38.22 2.69
27 28 5.984725 TCCGTATGTGGTTCATAGTGAAAT 58.015 37.500 0.00 0.00 38.22 2.17
28 29 6.046593 TCCGTATGTGGTTCATAGTGAAATC 58.953 40.000 0.00 0.00 38.22 2.17
29 30 6.049149 CCGTATGTGGTTCATAGTGAAATCT 58.951 40.000 0.00 0.00 38.22 2.40
30 31 6.201044 CCGTATGTGGTTCATAGTGAAATCTC 59.799 42.308 0.00 0.00 38.22 2.75
31 32 6.980978 CGTATGTGGTTCATAGTGAAATCTCT 59.019 38.462 0.00 0.00 38.22 3.10
32 33 7.168302 CGTATGTGGTTCATAGTGAAATCTCTC 59.832 40.741 0.00 0.00 38.22 3.20
33 34 5.734720 TGTGGTTCATAGTGAAATCTCTCC 58.265 41.667 0.00 0.00 38.22 3.71
34 35 5.248248 TGTGGTTCATAGTGAAATCTCTCCA 59.752 40.000 0.00 0.00 38.22 3.86
35 36 6.173339 GTGGTTCATAGTGAAATCTCTCCAA 58.827 40.000 0.00 0.00 38.22 3.53
36 37 6.655003 GTGGTTCATAGTGAAATCTCTCCAAA 59.345 38.462 0.00 0.00 38.22 3.28
37 38 6.881065 TGGTTCATAGTGAAATCTCTCCAAAG 59.119 38.462 0.00 0.00 38.22 2.77
38 39 7.106239 GGTTCATAGTGAAATCTCTCCAAAGA 58.894 38.462 0.00 0.00 38.22 2.52
39 40 7.065204 GGTTCATAGTGAAATCTCTCCAAAGAC 59.935 40.741 0.00 0.00 38.22 3.01
40 41 7.487822 TCATAGTGAAATCTCTCCAAAGACT 57.512 36.000 0.00 0.00 0.00 3.24
41 42 7.911651 TCATAGTGAAATCTCTCCAAAGACTT 58.088 34.615 0.00 0.00 0.00 3.01
42 43 9.035890 TCATAGTGAAATCTCTCCAAAGACTTA 57.964 33.333 0.00 0.00 0.00 2.24
43 44 9.829507 CATAGTGAAATCTCTCCAAAGACTTAT 57.170 33.333 0.00 0.00 0.00 1.73
54 55 9.250624 CTCTCCAAAGACTTATATTTAGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
55 56 8.202137 TCTCCAAAGACTTATATTTAGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
56 57 8.081517 TCCAAAGACTTATATTTAGGAACGGA 57.918 34.615 0.00 0.00 0.00 4.69
57 58 7.983484 TCCAAAGACTTATATTTAGGAACGGAC 59.017 37.037 0.00 0.00 0.00 4.79
58 59 7.226128 CCAAAGACTTATATTTAGGAACGGACC 59.774 40.741 0.00 0.00 0.00 4.46
59 60 7.672122 AAGACTTATATTTAGGAACGGACCT 57.328 36.000 7.72 7.72 43.32 3.85
60 61 8.773033 AAGACTTATATTTAGGAACGGACCTA 57.227 34.615 5.90 5.90 41.00 3.08
61 62 8.773033 AGACTTATATTTAGGAACGGACCTAA 57.227 34.615 15.33 15.33 46.64 2.69
71 72 8.773033 TTAGGAACGGACCTAAATATAAGTCT 57.227 34.615 16.45 0.00 45.75 3.24
72 73 7.672122 AGGAACGGACCTAAATATAAGTCTT 57.328 36.000 0.83 0.00 38.65 3.01
73 74 8.087303 AGGAACGGACCTAAATATAAGTCTTT 57.913 34.615 0.83 0.00 38.65 2.52
74 75 8.546322 AGGAACGGACCTAAATATAAGTCTTTT 58.454 33.333 0.83 0.00 38.65 2.27
75 76 9.170734 GGAACGGACCTAAATATAAGTCTTTTT 57.829 33.333 0.00 0.00 0.00 1.94
103 104 4.442401 TCCACTATGGACTACATACGGA 57.558 45.455 0.00 0.00 42.67 4.69
104 105 4.395625 TCCACTATGGACTACATACGGAG 58.604 47.826 0.00 0.00 42.67 4.63
105 106 3.057456 CCACTATGGACTACATACGGAGC 60.057 52.174 0.00 0.00 40.96 4.70
106 107 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
107 108 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
108 109 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
109 110 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
110 111 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
111 112 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
112 113 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
113 114 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
114 115 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
115 116 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
116 117 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
117 118 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
118 119 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
119 120 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
120 121 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
121 122 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
122 123 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
123 124 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
124 125 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
166 167 8.867112 ATACATCCGTATGTTAGTTTGTAGTG 57.133 34.615 0.00 0.00 44.07 2.74
167 168 6.103997 ACATCCGTATGTTAGTTTGTAGTGG 58.896 40.000 0.00 0.00 44.07 4.00
168 169 5.981088 TCCGTATGTTAGTTTGTAGTGGA 57.019 39.130 0.00 0.00 0.00 4.02
169 170 6.343716 TCCGTATGTTAGTTTGTAGTGGAA 57.656 37.500 0.00 0.00 0.00 3.53
170 171 6.938507 TCCGTATGTTAGTTTGTAGTGGAAT 58.061 36.000 0.00 0.00 0.00 3.01
171 172 7.037438 TCCGTATGTTAGTTTGTAGTGGAATC 58.963 38.462 0.00 0.00 0.00 2.52
172 173 7.039882 CCGTATGTTAGTTTGTAGTGGAATCT 58.960 38.462 0.00 0.00 0.00 2.40
173 174 7.222224 CCGTATGTTAGTTTGTAGTGGAATCTC 59.778 40.741 0.00 0.00 0.00 2.75
174 175 7.974501 CGTATGTTAGTTTGTAGTGGAATCTCT 59.025 37.037 0.00 0.00 0.00 3.10
182 183 9.274206 AGTTTGTAGTGGAATCTCTAAAAAGAC 57.726 33.333 3.22 0.00 30.99 3.01
183 184 9.274206 GTTTGTAGTGGAATCTCTAAAAAGACT 57.726 33.333 3.22 0.00 30.99 3.24
184 185 9.847224 TTTGTAGTGGAATCTCTAAAAAGACTT 57.153 29.630 0.00 0.00 28.58 3.01
186 187 9.924650 TGTAGTGGAATCTCTAAAAAGACTTAC 57.075 33.333 0.00 0.00 0.00 2.34
187 188 9.924650 GTAGTGGAATCTCTAAAAAGACTTACA 57.075 33.333 0.00 0.00 0.00 2.41
201 202 7.668525 AAAGACTTACATTTAGAAACGGAGG 57.331 36.000 0.00 0.00 0.00 4.30
202 203 5.731591 AGACTTACATTTAGAAACGGAGGG 58.268 41.667 0.00 0.00 0.00 4.30
203 204 5.482878 AGACTTACATTTAGAAACGGAGGGA 59.517 40.000 0.00 0.00 0.00 4.20
204 205 5.731591 ACTTACATTTAGAAACGGAGGGAG 58.268 41.667 0.00 0.00 0.00 4.30
258 259 1.200020 CAAAGACATCCAAACGAGGGC 59.800 52.381 0.00 0.00 0.00 5.19
280 282 1.937546 GCCATTTCCCAAGAGCACGG 61.938 60.000 0.00 0.00 0.00 4.94
319 321 8.261492 ACATGATCTCTTCAGATTTTGTGTAC 57.739 34.615 0.00 0.00 39.71 2.90
363 365 4.744795 ACAGAATAAGCTCTTCCGTGAT 57.255 40.909 5.59 0.00 0.00 3.06
405 407 2.806945 AGCATTGCTTACAGGGCTAA 57.193 45.000 5.03 0.00 33.89 3.09
438 440 0.758734 TGGGATCTATGGTTCAGCGG 59.241 55.000 0.00 0.00 0.00 5.52
442 444 0.833287 ATCTATGGTTCAGCGGCAGT 59.167 50.000 1.45 0.00 0.00 4.40
443 445 0.613260 TCTATGGTTCAGCGGCAGTT 59.387 50.000 1.45 0.00 0.00 3.16
451 453 0.323302 TCAGCGGCAGTTAACATCCA 59.677 50.000 8.61 0.00 0.00 3.41
454 456 1.003118 AGCGGCAGTTAACATCCAGAA 59.997 47.619 8.61 0.00 0.00 3.02
455 457 1.398390 GCGGCAGTTAACATCCAGAAG 59.602 52.381 8.61 0.00 0.00 2.85
456 458 2.009774 CGGCAGTTAACATCCAGAAGG 58.990 52.381 8.61 0.00 0.00 3.46
459 461 2.290960 GCAGTTAACATCCAGAAGGGGT 60.291 50.000 8.61 0.00 37.22 4.95
464 471 1.930656 CATCCAGAAGGGGTGGGGT 60.931 63.158 0.00 0.00 44.69 4.95
501 508 3.001902 GCGGATCCTGTGGACGTCA 62.002 63.158 18.91 0.27 32.98 4.35
720 729 1.306141 AGTCTCTGGGAATGGCGGA 60.306 57.895 0.00 0.00 0.00 5.54
807 817 4.280494 AGACTGCGCCGTCGTGTT 62.280 61.111 23.52 6.01 38.90 3.32
808 818 3.335534 GACTGCGCCGTCGTGTTT 61.336 61.111 16.28 0.00 38.14 2.83
809 819 3.277742 GACTGCGCCGTCGTGTTTC 62.278 63.158 16.28 0.00 38.14 2.78
887 897 2.798976 TTACGCGTCTGTTGGTAAGT 57.201 45.000 18.63 0.00 0.00 2.24
912 922 4.624452 GCGTATTTTCCGTCTACAAGACTT 59.376 41.667 5.59 0.00 42.92 3.01
913 923 5.220172 GCGTATTTTCCGTCTACAAGACTTC 60.220 44.000 5.59 0.00 42.92 3.01
914 924 6.091437 CGTATTTTCCGTCTACAAGACTTCT 58.909 40.000 5.59 0.00 42.92 2.85
915 925 6.033619 CGTATTTTCCGTCTACAAGACTTCTG 59.966 42.308 5.59 0.00 42.92 3.02
950 962 2.664081 CCTGCCTGGACAGTCCTCC 61.664 68.421 20.82 9.11 37.46 4.30
1097 1109 4.211330 TCCAGCGCCCCCAAAACA 62.211 61.111 2.29 0.00 0.00 2.83
1308 1327 0.173935 TGACAAGTGTTCGTCGTGGT 59.826 50.000 0.00 0.00 34.78 4.16
1376 1395 1.671901 GCTCTCTCTGTCGAAGGGGG 61.672 65.000 0.00 0.00 0.00 5.40
1471 1490 8.739972 GGTGATGAGTCAATTATACCTGTTTTT 58.260 33.333 0.00 0.00 35.80 1.94
1478 1497 8.860088 AGTCAATTATACCTGTTTTTGAGCTTT 58.140 29.630 0.00 0.00 0.00 3.51
1573 1592 7.490657 TGAGATCCTACAAAGCCTTTACTAA 57.509 36.000 0.00 0.00 0.00 2.24
1612 1631 3.055094 GGGCTTCATAGTTCAGTGGAAGA 60.055 47.826 8.28 0.00 37.70 2.87
1616 1635 5.808030 GCTTCATAGTTCAGTGGAAGACTAC 59.192 44.000 8.28 0.00 37.70 2.73
1829 1850 4.782252 TTCTCGTGGTTGTTTTAACTCG 57.218 40.909 0.00 0.00 0.00 4.18
1837 1858 4.396790 TGGTTGTTTTAACTCGTGAGCTTT 59.603 37.500 0.00 0.00 0.00 3.51
1880 1901 5.909621 ATATTGATTGGCATCCATAGCAC 57.090 39.130 0.00 0.00 31.53 4.40
1905 1927 7.101700 CGAAACCCTTCCTAGTAATTTGTAGT 58.898 38.462 0.00 0.00 0.00 2.73
1930 1953 3.983044 ACTATTCCCACAGTTCCACTC 57.017 47.619 0.00 0.00 0.00 3.51
1959 1982 6.430000 ACGCTTTAAAGACAATCATGTTAGGT 59.570 34.615 19.48 0.00 40.74 3.08
2089 2112 5.614923 ACCGTCTCTCGACATATATTGAG 57.385 43.478 0.00 0.00 42.86 3.02
2128 2151 7.163441 GGTTGTAGGTATCCAAAGTTTACTCA 58.837 38.462 0.00 0.00 0.00 3.41
2139 2162 3.915437 AGTTTACTCACGCCAAATTGG 57.085 42.857 7.84 7.84 41.55 3.16
2515 2545 0.178981 AGGCTCTGCTTCTTTGGCAA 60.179 50.000 0.00 0.00 39.30 4.52
2566 2596 6.236409 TCAATCTTCTTCAGCTTCATTGAGT 58.764 36.000 0.00 0.00 0.00 3.41
2589 2620 2.231721 AGGAACCGCTTTGTCTAGACTC 59.768 50.000 23.01 9.77 0.00 3.36
2608 2639 7.362802 AGACTCTTACTCCTTGTAGTTTGTT 57.637 36.000 0.00 0.00 32.08 2.83
2660 2691 8.070171 ACATAATTGACAATTTATGCGCTAGAC 58.930 33.333 18.15 0.00 32.38 2.59
2661 2692 4.875544 TTGACAATTTATGCGCTAGACC 57.124 40.909 9.73 0.00 0.00 3.85
2662 2693 4.137116 TGACAATTTATGCGCTAGACCT 57.863 40.909 9.73 0.00 0.00 3.85
2663 2694 5.270893 TGACAATTTATGCGCTAGACCTA 57.729 39.130 9.73 0.00 0.00 3.08
2664 2695 5.289595 TGACAATTTATGCGCTAGACCTAG 58.710 41.667 9.73 0.00 36.29 3.02
2665 2696 5.068591 TGACAATTTATGCGCTAGACCTAGA 59.931 40.000 9.73 0.00 35.21 2.43
2687 2718 9.553064 CTAGACTTGAATCCAAAATATGTAGCT 57.447 33.333 0.00 0.00 0.00 3.32
2688 2719 8.814038 AGACTTGAATCCAAAATATGTAGCTT 57.186 30.769 0.00 0.00 0.00 3.74
2712 2743 2.563179 ACGTCAATCACCTGCTAGAAGT 59.437 45.455 0.00 0.00 0.00 3.01
2727 2758 4.503296 GCTAGAAGTTGAACAGTTGAGGGA 60.503 45.833 0.00 0.00 0.00 4.20
2847 2962 8.239314 GCACATTTGAGAAGTTTGATAATCAGA 58.761 33.333 0.00 0.00 0.00 3.27
2887 3002 6.319911 GGCTTATCTGGCAGAAGAAAAATACT 59.680 38.462 22.84 3.07 0.00 2.12
3055 3179 5.418524 AGTGCAATCAACAATAATACAGGCA 59.581 36.000 0.00 0.00 0.00 4.75
3063 3187 6.316140 TCAACAATAATACAGGCACTCACATC 59.684 38.462 0.00 0.00 34.60 3.06
3066 3190 6.986817 ACAATAATACAGGCACTCACATCTAC 59.013 38.462 0.00 0.00 34.60 2.59
3096 3220 4.510571 GCATTTCCATTCTTTGCCATCTT 58.489 39.130 0.00 0.00 0.00 2.40
3113 3237 8.458573 TGCCATCTTTTAACTGTCTTTTCTTA 57.541 30.769 0.00 0.00 0.00 2.10
3234 3359 5.551760 ATTATGCTTTCACTTCACTTCCG 57.448 39.130 0.00 0.00 0.00 4.30
3286 3411 3.308530 GCACTTTGCAGTTCCATGTTAC 58.691 45.455 0.00 0.00 44.26 2.50
3293 3418 6.656632 TTGCAGTTCCATGTTACCAATTTA 57.343 33.333 0.00 0.00 0.00 1.40
3359 3484 5.859114 CTTCCTCCAGAATACGAATACATCG 59.141 44.000 0.00 0.00 45.00 3.84
3375 3500 8.407457 GAATACATCGATTAATTAGCATCCGA 57.593 34.615 0.00 0.00 0.00 4.55
3430 3555 6.039047 CAGCCATTACAAGCTATGAGATGTTT 59.961 38.462 0.00 0.00 37.18 2.83
3642 3767 2.882876 CCATGACCTTGCAGCTGC 59.117 61.111 31.89 31.89 42.50 5.25
3668 3793 6.401047 TCTATCAGTACAAAGGAATACCGG 57.599 41.667 0.00 0.00 41.83 5.28
3670 3795 2.835764 TCAGTACAAAGGAATACCGGCT 59.164 45.455 0.00 0.00 41.83 5.52
3672 3797 2.570302 AGTACAAAGGAATACCGGCTGT 59.430 45.455 0.00 0.00 41.83 4.40
3680 3805 2.161609 GGAATACCGGCTGTGTTTTCAG 59.838 50.000 0.00 0.00 38.35 3.02
3683 3808 0.180406 ACCGGCTGTGTTTTCAGACT 59.820 50.000 0.00 0.00 40.96 3.24
3698 3824 1.482182 CAGACTCGTGGGATGGAATGA 59.518 52.381 0.00 0.00 0.00 2.57
3701 3827 1.233019 CTCGTGGGATGGAATGATGC 58.767 55.000 0.00 0.00 0.00 3.91
3704 3830 1.325355 GTGGGATGGAATGATGCAGG 58.675 55.000 0.00 0.00 0.00 4.85
3718 3844 3.009473 TGATGCAGGCCTCTAAAGAAACT 59.991 43.478 0.00 0.00 0.00 2.66
3750 3876 4.448732 CGCAAAATCTCCATGACGATCATA 59.551 41.667 0.00 0.00 34.28 2.15
3784 3910 1.867363 TAGCCCCTCTTCTGTTCTCC 58.133 55.000 0.00 0.00 0.00 3.71
3789 3915 1.474879 CCCTCTTCTGTTCTCCGACTC 59.525 57.143 0.00 0.00 0.00 3.36
3791 3917 0.522180 TCTTCTGTTCTCCGACTCGC 59.478 55.000 0.00 0.00 0.00 5.03
3848 3975 8.835467 TTGAAGAACTTTTATGTCTCGTTTTG 57.165 30.769 0.00 0.00 0.00 2.44
3858 3985 2.206750 GTCTCGTTTTGGTGTGCTGTA 58.793 47.619 0.00 0.00 0.00 2.74
3903 4030 2.743752 CGATGGTTGCCACTGCTCG 61.744 63.158 0.00 0.00 35.80 5.03
3939 4066 1.369091 AATAGCAACTGAAGGCGCGG 61.369 55.000 8.83 0.00 34.54 6.46
3966 4093 1.293924 GCCGTGTGGATGATTCTGAG 58.706 55.000 0.00 0.00 37.49 3.35
3967 4094 1.293924 CCGTGTGGATGATTCTGAGC 58.706 55.000 0.00 0.00 37.49 4.26
4042 4169 6.486993 GTGGATTAGAAGTTGACTGGAAAGTT 59.513 38.462 0.00 0.00 0.00 2.66
4070 4198 1.589716 GCTTGGAGGAAATGCGCAGT 61.590 55.000 18.32 11.60 0.00 4.40
4100 4239 1.916697 GCAAGTTCTTGCTCTCGGCC 61.917 60.000 24.49 0.00 44.15 6.13
4136 5640 3.655486 TCATCGTAAAACGGCAAGAGAA 58.345 40.909 0.00 0.00 42.81 2.87
4190 5695 0.861866 CGTCGTATCACAGGCTCACG 60.862 60.000 0.00 0.00 0.00 4.35
4204 5709 1.079612 TCACGTGCTGCATGAGGAG 60.080 57.895 27.26 13.70 36.10 3.69
4225 5730 3.134127 GCGAGAGGCGGCCAAATT 61.134 61.111 23.09 0.00 41.29 1.82
4226 5731 3.102097 CGAGAGGCGGCCAAATTC 58.898 61.111 23.09 9.95 36.03 2.17
4227 5732 1.745115 CGAGAGGCGGCCAAATTCA 60.745 57.895 23.09 0.00 36.03 2.57
4228 5733 1.803289 GAGAGGCGGCCAAATTCAC 59.197 57.895 23.09 4.70 0.00 3.18
4229 5734 0.678048 GAGAGGCGGCCAAATTCACT 60.678 55.000 23.09 8.10 0.00 3.41
4230 5735 0.962356 AGAGGCGGCCAAATTCACTG 60.962 55.000 23.09 0.00 0.00 3.66
4231 5736 1.228552 AGGCGGCCAAATTCACTGT 60.229 52.632 23.09 0.00 0.00 3.55
4232 5737 0.827507 AGGCGGCCAAATTCACTGTT 60.828 50.000 23.09 0.00 0.00 3.16
4233 5738 0.033366 GGCGGCCAAATTCACTGTTT 59.967 50.000 15.62 0.00 0.00 2.83
4234 5739 1.540146 GGCGGCCAAATTCACTGTTTT 60.540 47.619 15.62 0.00 0.00 2.43
4235 5740 1.526464 GCGGCCAAATTCACTGTTTTG 59.474 47.619 2.24 0.00 33.58 2.44
4236 5741 2.801342 GCGGCCAAATTCACTGTTTTGA 60.801 45.455 2.24 0.00 35.34 2.69
4237 5742 3.652274 CGGCCAAATTCACTGTTTTGAT 58.348 40.909 2.24 0.00 35.34 2.57
4238 5743 3.674753 CGGCCAAATTCACTGTTTTGATC 59.325 43.478 2.24 0.00 35.34 2.92
4239 5744 3.996363 GGCCAAATTCACTGTTTTGATCC 59.004 43.478 0.00 3.28 35.34 3.36
4240 5745 4.262592 GGCCAAATTCACTGTTTTGATCCT 60.263 41.667 0.00 0.00 35.34 3.24
4241 5746 5.299949 GCCAAATTCACTGTTTTGATCCTT 58.700 37.500 5.29 0.00 35.34 3.36
4242 5747 5.759763 GCCAAATTCACTGTTTTGATCCTTT 59.240 36.000 5.29 0.00 35.34 3.11
4243 5748 6.260714 GCCAAATTCACTGTTTTGATCCTTTT 59.739 34.615 5.29 0.00 35.34 2.27
4244 5749 7.632721 CCAAATTCACTGTTTTGATCCTTTTG 58.367 34.615 5.29 0.00 35.34 2.44
4245 5750 7.280652 CCAAATTCACTGTTTTGATCCTTTTGT 59.719 33.333 5.29 0.00 35.34 2.83
4246 5751 7.775397 AATTCACTGTTTTGATCCTTTTGTG 57.225 32.000 0.00 0.00 0.00 3.33
4247 5752 4.681744 TCACTGTTTTGATCCTTTTGTGC 58.318 39.130 0.00 0.00 0.00 4.57
4248 5753 4.159321 TCACTGTTTTGATCCTTTTGTGCA 59.841 37.500 0.00 0.00 0.00 4.57
4249 5754 4.268405 CACTGTTTTGATCCTTTTGTGCAC 59.732 41.667 10.75 10.75 0.00 4.57
4250 5755 3.443037 TGTTTTGATCCTTTTGTGCACG 58.557 40.909 13.13 0.00 0.00 5.34
4251 5756 3.119316 TGTTTTGATCCTTTTGTGCACGT 60.119 39.130 13.13 0.00 0.00 4.49
4252 5757 3.791973 TTTGATCCTTTTGTGCACGTT 57.208 38.095 13.13 0.00 0.00 3.99
4253 5758 4.902443 TTTGATCCTTTTGTGCACGTTA 57.098 36.364 13.13 0.00 0.00 3.18
4254 5759 4.902443 TTGATCCTTTTGTGCACGTTAA 57.098 36.364 13.13 3.51 0.00 2.01
4255 5760 4.481930 TGATCCTTTTGTGCACGTTAAG 57.518 40.909 13.13 14.19 0.00 1.85
4256 5761 2.766970 TCCTTTTGTGCACGTTAAGC 57.233 45.000 13.13 0.00 0.00 3.09
4257 5762 1.335496 TCCTTTTGTGCACGTTAAGCC 59.665 47.619 13.13 0.00 0.00 4.35
4258 5763 1.394697 CTTTTGTGCACGTTAAGCCG 58.605 50.000 13.13 0.00 0.00 5.52
4259 5764 0.592754 TTTTGTGCACGTTAAGCCGC 60.593 50.000 13.13 0.00 0.00 6.53
4260 5765 1.715862 TTTGTGCACGTTAAGCCGCA 61.716 50.000 13.13 0.00 0.00 5.69
4261 5766 1.511318 TTGTGCACGTTAAGCCGCAT 61.511 50.000 13.13 0.00 36.64 4.73
4262 5767 1.226018 GTGCACGTTAAGCCGCATC 60.226 57.895 0.00 0.00 36.64 3.91
4263 5768 1.375396 TGCACGTTAAGCCGCATCT 60.375 52.632 0.00 0.00 0.00 2.90
4264 5769 1.060937 GCACGTTAAGCCGCATCTG 59.939 57.895 0.00 0.00 0.00 2.90
4265 5770 1.358725 GCACGTTAAGCCGCATCTGA 61.359 55.000 0.00 0.00 0.00 3.27
4266 5771 0.370273 CACGTTAAGCCGCATCTGAC 59.630 55.000 0.00 0.00 0.00 3.51
4267 5772 0.739813 ACGTTAAGCCGCATCTGACC 60.740 55.000 0.00 0.00 0.00 4.02
4268 5773 1.429148 CGTTAAGCCGCATCTGACCC 61.429 60.000 0.00 0.00 0.00 4.46
4269 5774 1.095807 GTTAAGCCGCATCTGACCCC 61.096 60.000 0.00 0.00 0.00 4.95
4270 5775 1.271840 TTAAGCCGCATCTGACCCCT 61.272 55.000 0.00 0.00 0.00 4.79
4271 5776 1.686325 TAAGCCGCATCTGACCCCTC 61.686 60.000 0.00 0.00 0.00 4.30
4272 5777 3.474570 GCCGCATCTGACCCCTCT 61.475 66.667 0.00 0.00 0.00 3.69
4273 5778 2.503061 CCGCATCTGACCCCTCTG 59.497 66.667 0.00 0.00 0.00 3.35
4274 5779 2.503061 CGCATCTGACCCCTCTGG 59.497 66.667 0.00 0.00 41.37 3.86
4302 5807 5.644977 AAAATTCGGATCTGACCCTTTTC 57.355 39.130 2.94 0.00 0.00 2.29
4303 5808 2.781681 TTCGGATCTGACCCTTTTCC 57.218 50.000 2.94 0.00 0.00 3.13
4304 5809 1.952621 TCGGATCTGACCCTTTTCCT 58.047 50.000 0.00 0.00 0.00 3.36
4305 5810 3.110293 TCGGATCTGACCCTTTTCCTA 57.890 47.619 0.00 0.00 0.00 2.94
4306 5811 2.764572 TCGGATCTGACCCTTTTCCTAC 59.235 50.000 0.00 0.00 0.00 3.18
4307 5812 2.158943 CGGATCTGACCCTTTTCCTACC 60.159 54.545 0.00 0.00 0.00 3.18
4308 5813 2.158943 GGATCTGACCCTTTTCCTACCG 60.159 54.545 0.00 0.00 0.00 4.02
4309 5814 0.611714 TCTGACCCTTTTCCTACCGC 59.388 55.000 0.00 0.00 0.00 5.68
4310 5815 0.392595 CTGACCCTTTTCCTACCGCC 60.393 60.000 0.00 0.00 0.00 6.13
4311 5816 1.449070 GACCCTTTTCCTACCGCCG 60.449 63.158 0.00 0.00 0.00 6.46
4312 5817 2.822701 CCCTTTTCCTACCGCCGC 60.823 66.667 0.00 0.00 0.00 6.53
4313 5818 2.822701 CCTTTTCCTACCGCCGCC 60.823 66.667 0.00 0.00 0.00 6.13
4314 5819 2.046700 CTTTTCCTACCGCCGCCA 60.047 61.111 0.00 0.00 0.00 5.69
4315 5820 2.046700 TTTTCCTACCGCCGCCAG 60.047 61.111 0.00 0.00 0.00 4.85
4316 5821 4.770874 TTTCCTACCGCCGCCAGC 62.771 66.667 0.00 0.00 38.52 4.85
4320 5825 4.880537 CTACCGCCGCCAGCTCTG 62.881 72.222 0.00 0.00 40.39 3.35
4329 5834 3.854669 CCAGCTCTGGCGGTAGGG 61.855 72.222 2.59 0.00 44.73 3.53
4330 5835 2.759973 CAGCTCTGGCGGTAGGGA 60.760 66.667 0.00 0.00 44.37 4.20
4331 5836 2.760385 AGCTCTGGCGGTAGGGAC 60.760 66.667 0.00 0.00 44.37 4.46
4332 5837 3.851128 GCTCTGGCGGTAGGGACC 61.851 72.222 0.00 0.00 43.03 4.46
4333 5838 3.155167 CTCTGGCGGTAGGGACCC 61.155 72.222 0.59 0.59 43.64 4.46
4339 5844 2.681064 CGGTAGGGACCCGGTCAA 60.681 66.667 19.43 1.25 43.64 3.18
4340 5845 2.984623 GGTAGGGACCCGGTCAAC 59.015 66.667 19.43 12.93 40.23 3.18
4341 5846 2.575461 GTAGGGACCCGGTCAACG 59.425 66.667 19.43 0.00 43.80 4.10
4342 5847 2.118076 TAGGGACCCGGTCAACGT 59.882 61.111 19.43 7.03 42.24 3.99
4343 5848 1.978617 TAGGGACCCGGTCAACGTC 60.979 63.158 19.43 0.00 42.24 4.34
4344 5849 4.729856 GGGACCCGGTCAACGTCG 62.730 72.222 19.43 0.00 42.24 5.12
4345 5850 3.673484 GGACCCGGTCAACGTCGA 61.673 66.667 19.43 0.00 42.24 4.20
4346 5851 2.570181 GACCCGGTCAACGTCGAT 59.430 61.111 13.05 0.00 42.24 3.59
4347 5852 1.804326 GACCCGGTCAACGTCGATG 60.804 63.158 13.05 2.26 42.24 3.84
4348 5853 2.508439 CCCGGTCAACGTCGATGG 60.508 66.667 9.90 0.00 42.24 3.51
4349 5854 3.186047 CCGGTCAACGTCGATGGC 61.186 66.667 9.90 0.00 42.24 4.40
4350 5855 3.541831 CGGTCAACGTCGATGGCG 61.542 66.667 9.90 0.37 37.93 5.69
4351 5856 3.849953 GGTCAACGTCGATGGCGC 61.850 66.667 9.90 0.00 37.46 6.53
4352 5857 3.849953 GTCAACGTCGATGGCGCC 61.850 66.667 22.73 22.73 37.46 6.53
4365 5870 4.129737 GCGCCGTCTGCCTACTGA 62.130 66.667 0.00 0.00 36.24 3.41
4366 5871 2.202623 CGCCGTCTGCCTACTGAC 60.203 66.667 0.00 0.00 40.36 3.51
4370 5875 4.891566 GTCTGCCTACTGACGTGG 57.108 61.111 0.00 0.00 35.41 4.94
4371 5876 2.264124 GTCTGCCTACTGACGTGGA 58.736 57.895 0.00 0.00 35.41 4.02
4372 5877 0.818296 GTCTGCCTACTGACGTGGAT 59.182 55.000 0.00 0.00 35.41 3.41
4373 5878 2.022195 GTCTGCCTACTGACGTGGATA 58.978 52.381 0.00 0.00 35.41 2.59
4374 5879 2.426024 GTCTGCCTACTGACGTGGATAA 59.574 50.000 0.00 0.00 35.41 1.75
4375 5880 2.688446 TCTGCCTACTGACGTGGATAAG 59.312 50.000 0.00 0.00 0.00 1.73
4376 5881 2.427453 CTGCCTACTGACGTGGATAAGT 59.573 50.000 0.00 0.00 0.00 2.24
4377 5882 2.165641 TGCCTACTGACGTGGATAAGTG 59.834 50.000 0.00 0.00 0.00 3.16
4378 5883 2.481449 GCCTACTGACGTGGATAAGTGG 60.481 54.545 0.00 0.00 0.00 4.00
4379 5884 2.481449 CCTACTGACGTGGATAAGTGGC 60.481 54.545 0.00 0.00 0.00 5.01
4380 5885 1.267121 ACTGACGTGGATAAGTGGCT 58.733 50.000 0.00 0.00 0.00 4.75
4381 5886 2.453521 ACTGACGTGGATAAGTGGCTA 58.546 47.619 0.00 0.00 0.00 3.93
4382 5887 2.165845 ACTGACGTGGATAAGTGGCTAC 59.834 50.000 0.00 0.00 0.00 3.58
4383 5888 1.479323 TGACGTGGATAAGTGGCTACC 59.521 52.381 0.00 0.00 0.00 3.18
4384 5889 0.458669 ACGTGGATAAGTGGCTACCG 59.541 55.000 0.00 0.00 0.00 4.02
4385 5890 0.874607 CGTGGATAAGTGGCTACCGC 60.875 60.000 0.00 0.00 0.00 5.68
4403 5908 2.586079 CACTGGCCGTGGCGATAG 60.586 66.667 16.84 5.90 43.06 2.08
4404 5909 3.849951 ACTGGCCGTGGCGATAGG 61.850 66.667 4.53 0.00 43.06 2.57
4405 5910 3.849951 CTGGCCGTGGCGATAGGT 61.850 66.667 4.53 0.00 43.06 3.08
4406 5911 3.792053 CTGGCCGTGGCGATAGGTC 62.792 68.421 4.53 0.00 43.06 3.85
4407 5912 3.537874 GGCCGTGGCGATAGGTCT 61.538 66.667 4.53 0.00 43.06 3.85
4408 5913 2.198287 GGCCGTGGCGATAGGTCTA 61.198 63.158 4.53 0.00 43.06 2.59
4409 5914 1.286260 GCCGTGGCGATAGGTCTAG 59.714 63.158 0.00 0.00 0.00 2.43
4410 5915 1.957562 CCGTGGCGATAGGTCTAGG 59.042 63.158 0.00 0.00 0.00 3.02
4411 5916 1.286260 CGTGGCGATAGGTCTAGGC 59.714 63.158 0.00 0.00 0.00 3.93
4412 5917 1.452953 CGTGGCGATAGGTCTAGGCA 61.453 60.000 0.00 0.00 36.82 4.75
4413 5918 0.315568 GTGGCGATAGGTCTAGGCAG 59.684 60.000 0.00 0.00 39.81 4.85
4414 5919 1.290639 GGCGATAGGTCTAGGCAGC 59.709 63.158 0.00 0.00 0.00 5.25
4415 5920 1.290639 GCGATAGGTCTAGGCAGCC 59.709 63.158 1.84 1.84 0.00 4.85
4416 5921 1.182385 GCGATAGGTCTAGGCAGCCT 61.182 60.000 20.63 20.63 37.71 4.58
4417 5922 1.333177 CGATAGGTCTAGGCAGCCTT 58.667 55.000 22.26 2.97 34.61 4.35
4418 5923 1.271102 CGATAGGTCTAGGCAGCCTTC 59.729 57.143 22.26 8.22 34.61 3.46
4419 5924 1.621317 GATAGGTCTAGGCAGCCTTCC 59.379 57.143 22.26 19.15 34.61 3.46
4420 5925 0.755698 TAGGTCTAGGCAGCCTTCCG 60.756 60.000 22.26 9.04 34.61 4.30
4421 5926 2.202946 GTCTAGGCAGCCTTCCGC 60.203 66.667 22.26 4.19 34.61 5.54
4427 5932 4.087892 GCAGCCTTCCGCCAGAGA 62.088 66.667 0.00 0.00 38.78 3.10
4428 5933 2.125350 CAGCCTTCCGCCAGAGAC 60.125 66.667 0.00 0.00 38.78 3.36
4429 5934 3.764466 AGCCTTCCGCCAGAGACG 61.764 66.667 0.00 0.00 38.78 4.18
4438 5943 3.066190 CCAGAGACGGTGGCGGTA 61.066 66.667 0.00 0.00 0.00 4.02
4439 5944 2.490217 CAGAGACGGTGGCGGTAG 59.510 66.667 0.00 0.00 0.00 3.18
4440 5945 2.044555 CAGAGACGGTGGCGGTAGA 61.045 63.158 0.00 0.00 0.00 2.59
4441 5946 1.076923 AGAGACGGTGGCGGTAGAT 60.077 57.895 0.00 0.00 0.00 1.98
4442 5947 1.065928 GAGACGGTGGCGGTAGATG 59.934 63.158 0.00 0.00 0.00 2.90
4443 5948 2.585247 GACGGTGGCGGTAGATGC 60.585 66.667 0.00 0.00 0.00 3.91
4451 5956 3.996825 GCGGTAGATGCCTTTTGTG 57.003 52.632 0.00 0.00 0.00 3.33
4452 5957 0.179163 GCGGTAGATGCCTTTTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
4453 5958 1.453155 CGGTAGATGCCTTTTGTGCT 58.547 50.000 0.00 0.00 0.00 4.40
4454 5959 1.812571 CGGTAGATGCCTTTTGTGCTT 59.187 47.619 0.00 0.00 0.00 3.91
4455 5960 2.414559 CGGTAGATGCCTTTTGTGCTTG 60.415 50.000 0.00 0.00 0.00 4.01
4456 5961 2.094545 GGTAGATGCCTTTTGTGCTTGG 60.095 50.000 0.00 0.00 0.00 3.61
4457 5962 1.708341 AGATGCCTTTTGTGCTTGGT 58.292 45.000 0.00 0.00 0.00 3.67
4458 5963 1.342174 AGATGCCTTTTGTGCTTGGTG 59.658 47.619 0.00 0.00 0.00 4.17
4459 5964 0.393820 ATGCCTTTTGTGCTTGGTGG 59.606 50.000 0.00 0.00 0.00 4.61
4460 5965 1.595109 GCCTTTTGTGCTTGGTGGC 60.595 57.895 0.00 0.00 0.00 5.01
4461 5966 2.031674 GCCTTTTGTGCTTGGTGGCT 62.032 55.000 0.00 0.00 36.32 4.75
4462 5967 0.249573 CCTTTTGTGCTTGGTGGCTG 60.250 55.000 0.00 0.00 0.00 4.85
4463 5968 0.877213 CTTTTGTGCTTGGTGGCTGC 60.877 55.000 0.00 0.00 0.00 5.25
4464 5969 2.625973 TTTTGTGCTTGGTGGCTGCG 62.626 55.000 0.00 0.00 0.00 5.18
4489 5994 4.994756 CCTGCCCCACCCACCAAC 62.995 72.222 0.00 0.00 0.00 3.77
4490 5995 4.994756 CTGCCCCACCCACCAACC 62.995 72.222 0.00 0.00 0.00 3.77
4494 5999 4.212797 CCCACCCACCAACCCGTT 62.213 66.667 0.00 0.00 0.00 4.44
4495 6000 2.596338 CCACCCACCAACCCGTTC 60.596 66.667 0.00 0.00 0.00 3.95
4496 6001 2.513895 CACCCACCAACCCGTTCT 59.486 61.111 0.00 0.00 0.00 3.01
4497 6002 1.152839 CACCCACCAACCCGTTCTT 60.153 57.895 0.00 0.00 0.00 2.52
4498 6003 1.149854 ACCCACCAACCCGTTCTTC 59.850 57.895 0.00 0.00 0.00 2.87
4499 6004 1.602605 CCCACCAACCCGTTCTTCC 60.603 63.158 0.00 0.00 0.00 3.46
4500 6005 1.454539 CCACCAACCCGTTCTTCCT 59.545 57.895 0.00 0.00 0.00 3.36
4501 6006 0.605589 CCACCAACCCGTTCTTCCTC 60.606 60.000 0.00 0.00 0.00 3.71
4502 6007 0.605589 CACCAACCCGTTCTTCCTCC 60.606 60.000 0.00 0.00 0.00 4.30
4503 6008 0.767060 ACCAACCCGTTCTTCCTCCT 60.767 55.000 0.00 0.00 0.00 3.69
4504 6009 0.036294 CCAACCCGTTCTTCCTCCTC 60.036 60.000 0.00 0.00 0.00 3.71
4505 6010 0.036294 CAACCCGTTCTTCCTCCTCC 60.036 60.000 0.00 0.00 0.00 4.30
4506 6011 1.199425 AACCCGTTCTTCCTCCTCCC 61.199 60.000 0.00 0.00 0.00 4.30
4507 6012 2.368011 CCCGTTCTTCCTCCTCCCC 61.368 68.421 0.00 0.00 0.00 4.81
4508 6013 1.306226 CCGTTCTTCCTCCTCCCCT 60.306 63.158 0.00 0.00 0.00 4.79
4509 6014 1.331399 CCGTTCTTCCTCCTCCCCTC 61.331 65.000 0.00 0.00 0.00 4.30
4510 6015 1.668101 CGTTCTTCCTCCTCCCCTCG 61.668 65.000 0.00 0.00 0.00 4.63
4511 6016 0.324460 GTTCTTCCTCCTCCCCTCGA 60.324 60.000 0.00 0.00 0.00 4.04
4512 6017 0.637195 TTCTTCCTCCTCCCCTCGAT 59.363 55.000 0.00 0.00 0.00 3.59
4513 6018 0.186386 TCTTCCTCCTCCCCTCGATC 59.814 60.000 0.00 0.00 0.00 3.69
4514 6019 1.152735 TTCCTCCTCCCCTCGATCG 60.153 63.158 9.36 9.36 0.00 3.69
4515 6020 1.642513 TTCCTCCTCCCCTCGATCGA 61.643 60.000 18.32 18.32 0.00 3.59
4516 6021 1.152735 CCTCCTCCCCTCGATCGAA 60.153 63.158 19.92 2.92 0.00 3.71
4517 6022 1.457009 CCTCCTCCCCTCGATCGAAC 61.457 65.000 19.92 0.00 0.00 3.95
4518 6023 0.752009 CTCCTCCCCTCGATCGAACA 60.752 60.000 19.92 2.20 0.00 3.18
4519 6024 0.752009 TCCTCCCCTCGATCGAACAG 60.752 60.000 19.92 10.57 0.00 3.16
4520 6025 0.752009 CCTCCCCTCGATCGAACAGA 60.752 60.000 19.92 13.79 0.00 3.41
4521 6026 0.665835 CTCCCCTCGATCGAACAGAG 59.334 60.000 19.92 18.79 0.00 3.35
4523 6028 4.719997 CCTCGATCGAACAGAGGC 57.280 61.111 19.92 0.00 44.09 4.70
4524 6029 1.298713 CCTCGATCGAACAGAGGCG 60.299 63.158 19.92 4.51 44.09 5.52
4525 6030 1.715862 CCTCGATCGAACAGAGGCGA 61.716 60.000 19.92 0.00 44.09 5.54
4526 6031 0.316607 CTCGATCGAACAGAGGCGAG 60.317 60.000 19.92 0.00 44.86 5.03
4527 6032 1.941734 CGATCGAACAGAGGCGAGC 60.942 63.158 10.26 0.00 40.14 5.03
4528 6033 1.941734 GATCGAACAGAGGCGAGCG 60.942 63.158 0.00 0.00 40.14 5.03
4529 6034 3.417275 ATCGAACAGAGGCGAGCGG 62.417 63.158 0.00 0.00 40.14 5.52
4545 6050 3.223589 GGCGCCTCTCTCCTCCTC 61.224 72.222 22.15 0.00 0.00 3.71
4546 6051 3.223589 GCGCCTCTCTCCTCCTCC 61.224 72.222 0.00 0.00 0.00 4.30
4547 6052 2.520741 CGCCTCTCTCCTCCTCCC 60.521 72.222 0.00 0.00 0.00 4.30
4548 6053 2.520741 GCCTCTCTCCTCCTCCCG 60.521 72.222 0.00 0.00 0.00 5.14
4549 6054 3.063197 GCCTCTCTCCTCCTCCCGA 62.063 68.421 0.00 0.00 0.00 5.14
4550 6055 1.850549 CCTCTCTCCTCCTCCCGAT 59.149 63.158 0.00 0.00 0.00 4.18
4551 6056 0.251165 CCTCTCTCCTCCTCCCGATC 60.251 65.000 0.00 0.00 0.00 3.69
4552 6057 0.251165 CTCTCTCCTCCTCCCGATCC 60.251 65.000 0.00 0.00 0.00 3.36
4553 6058 1.228737 CTCTCCTCCTCCCGATCCC 60.229 68.421 0.00 0.00 0.00 3.85
4554 6059 2.203714 CTCCTCCTCCCGATCCCC 60.204 72.222 0.00 0.00 0.00 4.81
4555 6060 2.704198 TCCTCCTCCCGATCCCCT 60.704 66.667 0.00 0.00 0.00 4.79
4556 6061 2.203714 CCTCCTCCCGATCCCCTC 60.204 72.222 0.00 0.00 0.00 4.30
4557 6062 2.203714 CTCCTCCCGATCCCCTCC 60.204 72.222 0.00 0.00 0.00 4.30
4558 6063 3.837213 CTCCTCCCGATCCCCTCCC 62.837 73.684 0.00 0.00 0.00 4.30
4559 6064 3.851184 CCTCCCGATCCCCTCCCT 61.851 72.222 0.00 0.00 0.00 4.20
4560 6065 2.203714 CTCCCGATCCCCTCCCTC 60.204 72.222 0.00 0.00 0.00 4.30
4561 6066 4.220163 TCCCGATCCCCTCCCTCG 62.220 72.222 0.00 0.00 0.00 4.63
4562 6067 4.220163 CCCGATCCCCTCCCTCGA 62.220 72.222 0.00 0.00 34.41 4.04
4563 6068 2.118513 CCGATCCCCTCCCTCGAT 59.881 66.667 0.00 0.00 34.41 3.59
4564 6069 1.979693 CCGATCCCCTCCCTCGATC 60.980 68.421 0.00 0.00 34.41 3.69
4565 6070 1.075836 CGATCCCCTCCCTCGATCT 59.924 63.158 0.00 0.00 34.41 2.75
4566 6071 0.963355 CGATCCCCTCCCTCGATCTC 60.963 65.000 0.00 0.00 34.41 2.75
4567 6072 0.613572 GATCCCCTCCCTCGATCTCC 60.614 65.000 0.00 0.00 31.59 3.71
4568 6073 2.100525 ATCCCCTCCCTCGATCTCCC 62.101 65.000 0.00 0.00 0.00 4.30
4569 6074 2.784654 CCCCTCCCTCGATCTCCCT 61.785 68.421 0.00 0.00 0.00 4.20
4570 6075 1.228737 CCCTCCCTCGATCTCCCTC 60.229 68.421 0.00 0.00 0.00 4.30
4571 6076 1.725169 CCCTCCCTCGATCTCCCTCT 61.725 65.000 0.00 0.00 0.00 3.69
4572 6077 0.187361 CCTCCCTCGATCTCCCTCTT 59.813 60.000 0.00 0.00 0.00 2.85
4573 6078 1.616159 CTCCCTCGATCTCCCTCTTC 58.384 60.000 0.00 0.00 0.00 2.87
4574 6079 0.186386 TCCCTCGATCTCCCTCTTCC 59.814 60.000 0.00 0.00 0.00 3.46
4575 6080 0.830023 CCCTCGATCTCCCTCTTCCC 60.830 65.000 0.00 0.00 0.00 3.97
4576 6081 0.187361 CCTCGATCTCCCTCTTCCCT 59.813 60.000 0.00 0.00 0.00 4.20
4577 6082 1.412361 CCTCGATCTCCCTCTTCCCTT 60.412 57.143 0.00 0.00 0.00 3.95
4578 6083 1.960689 CTCGATCTCCCTCTTCCCTTC 59.039 57.143 0.00 0.00 0.00 3.46
4579 6084 1.288037 TCGATCTCCCTCTTCCCTTCA 59.712 52.381 0.00 0.00 0.00 3.02
4580 6085 1.410882 CGATCTCCCTCTTCCCTTCAC 59.589 57.143 0.00 0.00 0.00 3.18
4581 6086 1.765904 GATCTCCCTCTTCCCTTCACC 59.234 57.143 0.00 0.00 0.00 4.02
4582 6087 0.491823 TCTCCCTCTTCCCTTCACCA 59.508 55.000 0.00 0.00 0.00 4.17
4583 6088 1.081174 TCTCCCTCTTCCCTTCACCAT 59.919 52.381 0.00 0.00 0.00 3.55
4584 6089 1.918957 CTCCCTCTTCCCTTCACCATT 59.081 52.381 0.00 0.00 0.00 3.16
4585 6090 2.310052 CTCCCTCTTCCCTTCACCATTT 59.690 50.000 0.00 0.00 0.00 2.32
4586 6091 2.721906 TCCCTCTTCCCTTCACCATTTT 59.278 45.455 0.00 0.00 0.00 1.82
4587 6092 3.092301 CCCTCTTCCCTTCACCATTTTC 58.908 50.000 0.00 0.00 0.00 2.29
4588 6093 2.749621 CCTCTTCCCTTCACCATTTTCG 59.250 50.000 0.00 0.00 0.00 3.46
4589 6094 2.159382 TCTTCCCTTCACCATTTTCGC 58.841 47.619 0.00 0.00 0.00 4.70
4590 6095 0.878416 TTCCCTTCACCATTTTCGCG 59.122 50.000 0.00 0.00 0.00 5.87
4591 6096 0.958382 TCCCTTCACCATTTTCGCGG 60.958 55.000 6.13 0.00 0.00 6.46
4592 6097 0.958382 CCCTTCACCATTTTCGCGGA 60.958 55.000 6.13 0.00 0.00 5.54
4593 6098 1.094785 CCTTCACCATTTTCGCGGAT 58.905 50.000 6.13 0.00 0.00 4.18
4594 6099 1.064060 CCTTCACCATTTTCGCGGATC 59.936 52.381 6.13 0.00 0.00 3.36
4595 6100 2.009774 CTTCACCATTTTCGCGGATCT 58.990 47.619 6.13 0.00 0.00 2.75
4596 6101 2.107950 TCACCATTTTCGCGGATCTT 57.892 45.000 6.13 0.00 0.00 2.40
4597 6102 2.432444 TCACCATTTTCGCGGATCTTT 58.568 42.857 6.13 0.00 0.00 2.52
4598 6103 2.161410 TCACCATTTTCGCGGATCTTTG 59.839 45.455 6.13 0.00 0.00 2.77
4599 6104 1.472480 ACCATTTTCGCGGATCTTTGG 59.528 47.619 6.13 9.11 0.00 3.28
4600 6105 1.202290 CCATTTTCGCGGATCTTTGGG 60.202 52.381 6.13 0.00 0.00 4.12
4601 6106 1.102978 ATTTTCGCGGATCTTTGGGG 58.897 50.000 6.13 0.00 0.00 4.96
4602 6107 1.591504 TTTTCGCGGATCTTTGGGGC 61.592 55.000 6.13 0.00 0.00 5.80
4603 6108 2.756321 TTTCGCGGATCTTTGGGGCA 62.756 55.000 6.13 0.00 0.00 5.36
4604 6109 2.749839 CGCGGATCTTTGGGGCAA 60.750 61.111 0.00 0.00 0.00 4.52
4605 6110 2.339556 CGCGGATCTTTGGGGCAAA 61.340 57.895 0.00 0.00 0.00 3.68
4606 6111 1.666209 CGCGGATCTTTGGGGCAAAT 61.666 55.000 0.00 0.00 32.70 2.32
4607 6112 0.103026 GCGGATCTTTGGGGCAAATC 59.897 55.000 0.00 0.00 32.70 2.17
4608 6113 1.473258 CGGATCTTTGGGGCAAATCA 58.527 50.000 0.00 0.00 32.70 2.57
4609 6114 1.824230 CGGATCTTTGGGGCAAATCAA 59.176 47.619 0.00 0.00 32.70 2.57
4610 6115 2.233431 CGGATCTTTGGGGCAAATCAAA 59.767 45.455 0.00 0.00 32.70 2.69
4611 6116 3.676873 CGGATCTTTGGGGCAAATCAAAG 60.677 47.826 8.89 8.89 46.53 2.77
4615 6120 0.975887 TTGGGGCAAATCAAAGAGGC 59.024 50.000 0.00 0.00 0.00 4.70
4616 6121 0.904394 TGGGGCAAATCAAAGAGGCC 60.904 55.000 0.00 0.00 45.15 5.19
4617 6122 1.512694 GGGCAAATCAAAGAGGCCG 59.487 57.895 0.00 0.00 45.52 6.13
4618 6123 1.512694 GGCAAATCAAAGAGGCCGG 59.487 57.895 0.00 0.00 34.56 6.13
4619 6124 1.153765 GCAAATCAAAGAGGCCGGC 60.154 57.895 21.18 21.18 0.00 6.13
4620 6125 1.876497 GCAAATCAAAGAGGCCGGCA 61.876 55.000 30.85 5.63 0.00 5.69
4621 6126 0.602562 CAAATCAAAGAGGCCGGCAA 59.397 50.000 30.85 4.05 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.595133 TCACTATGAACCACATACGGATGTA 59.405 40.000 14.23 0.00 44.82 2.29
1 2 5.105106 TTCACTATGAACCACATACGGATGT 60.105 40.000 7.68 7.68 37.89 3.06
2 3 4.944048 TCACTATGAACCACATACGGATG 58.056 43.478 5.94 5.94 40.07 3.51
3 4 5.607939 TTCACTATGAACCACATACGGAT 57.392 39.130 0.00 0.00 40.07 4.18
4 5 5.408880 TTTCACTATGAACCACATACGGA 57.591 39.130 0.00 0.00 35.89 4.69
5 6 6.049149 AGATTTCACTATGAACCACATACGG 58.951 40.000 0.00 0.00 35.89 4.02
6 7 6.980978 AGAGATTTCACTATGAACCACATACG 59.019 38.462 0.00 0.00 35.89 3.06
7 8 7.439655 GGAGAGATTTCACTATGAACCACATAC 59.560 40.741 0.00 0.00 35.89 2.39
8 9 7.125659 TGGAGAGATTTCACTATGAACCACATA 59.874 37.037 0.00 0.00 35.89 2.29
9 10 6.070021 TGGAGAGATTTCACTATGAACCACAT 60.070 38.462 0.00 0.00 35.89 3.21
10 11 5.248248 TGGAGAGATTTCACTATGAACCACA 59.752 40.000 0.00 0.00 35.89 4.17
11 12 5.734720 TGGAGAGATTTCACTATGAACCAC 58.265 41.667 0.00 0.00 35.89 4.16
12 13 6.373005 TTGGAGAGATTTCACTATGAACCA 57.627 37.500 0.00 0.00 35.89 3.67
13 14 7.065204 GTCTTTGGAGAGATTTCACTATGAACC 59.935 40.741 0.00 0.00 32.04 3.62
14 15 7.821846 AGTCTTTGGAGAGATTTCACTATGAAC 59.178 37.037 0.00 0.00 32.04 3.18
15 16 7.911651 AGTCTTTGGAGAGATTTCACTATGAA 58.088 34.615 0.00 0.00 31.02 2.57
16 17 7.487822 AGTCTTTGGAGAGATTTCACTATGA 57.512 36.000 0.00 0.00 31.07 2.15
17 18 9.829507 ATAAGTCTTTGGAGAGATTTCACTATG 57.170 33.333 0.00 0.00 31.07 2.23
28 29 9.250624 CGTTCCTAAATATAAGTCTTTGGAGAG 57.749 37.037 0.00 0.00 31.07 3.20
29 30 8.202137 CCGTTCCTAAATATAAGTCTTTGGAGA 58.798 37.037 0.00 0.00 0.00 3.71
30 31 8.202137 TCCGTTCCTAAATATAAGTCTTTGGAG 58.798 37.037 0.00 0.00 0.00 3.86
31 32 7.983484 GTCCGTTCCTAAATATAAGTCTTTGGA 59.017 37.037 0.00 0.00 0.00 3.53
32 33 7.226128 GGTCCGTTCCTAAATATAAGTCTTTGG 59.774 40.741 0.00 0.00 0.00 3.28
33 34 7.985752 AGGTCCGTTCCTAAATATAAGTCTTTG 59.014 37.037 0.00 0.00 35.87 2.77
34 35 8.087303 AGGTCCGTTCCTAAATATAAGTCTTT 57.913 34.615 0.00 0.00 35.87 2.52
35 36 7.672122 AGGTCCGTTCCTAAATATAAGTCTT 57.328 36.000 0.00 0.00 35.87 3.01
36 37 8.773033 TTAGGTCCGTTCCTAAATATAAGTCT 57.227 34.615 11.49 0.00 44.14 3.24
46 47 8.773033 AGACTTATATTTAGGTCCGTTCCTAA 57.227 34.615 10.29 10.29 45.03 2.69
47 48 8.773033 AAGACTTATATTTAGGTCCGTTCCTA 57.227 34.615 2.50 0.00 35.57 2.94
48 49 7.672122 AAGACTTATATTTAGGTCCGTTCCT 57.328 36.000 2.50 1.46 35.57 3.36
49 50 8.728337 AAAAGACTTATATTTAGGTCCGTTCC 57.272 34.615 2.50 0.00 35.57 3.62
66 67 8.826765 TCCATAGTGGATTCTCTAAAAAGACTT 58.173 33.333 0.00 0.00 42.67 3.01
67 68 8.380742 TCCATAGTGGATTCTCTAAAAAGACT 57.619 34.615 0.00 0.00 42.67 3.24
82 83 4.395625 CTCCGTATGTAGTCCATAGTGGA 58.604 47.826 0.00 0.00 45.98 4.02
83 84 3.057456 GCTCCGTATGTAGTCCATAGTGG 60.057 52.174 0.00 0.00 36.71 4.00
84 85 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
85 86 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
86 87 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
87 88 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
88 89 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
89 90 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
90 91 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
91 92 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
92 93 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
93 94 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
94 95 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
95 96 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
96 97 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
97 98 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
98 99 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
99 100 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
100 101 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
101 102 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
102 103 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
140 141 9.955208 CACTACAAACTAACATACGGATGTATA 57.045 33.333 15.10 7.95 45.93 1.47
141 142 7.924412 CCACTACAAACTAACATACGGATGTAT 59.076 37.037 15.10 7.16 45.93 2.29
142 143 7.122501 TCCACTACAAACTAACATACGGATGTA 59.877 37.037 15.10 1.78 45.93 2.29
144 145 6.334989 TCCACTACAAACTAACATACGGATG 58.665 40.000 5.94 5.94 39.16 3.51
145 146 6.534475 TCCACTACAAACTAACATACGGAT 57.466 37.500 0.00 0.00 0.00 4.18
146 147 5.981088 TCCACTACAAACTAACATACGGA 57.019 39.130 0.00 0.00 0.00 4.69
147 148 7.039882 AGATTCCACTACAAACTAACATACGG 58.960 38.462 0.00 0.00 0.00 4.02
148 149 7.974501 AGAGATTCCACTACAAACTAACATACG 59.025 37.037 0.00 0.00 0.00 3.06
156 157 9.274206 GTCTTTTTAGAGATTCCACTACAAACT 57.726 33.333 0.00 0.00 0.00 2.66
157 158 9.274206 AGTCTTTTTAGAGATTCCACTACAAAC 57.726 33.333 0.00 0.00 0.00 2.93
158 159 9.847224 AAGTCTTTTTAGAGATTCCACTACAAA 57.153 29.630 0.00 0.00 0.00 2.83
160 161 9.924650 GTAAGTCTTTTTAGAGATTCCACTACA 57.075 33.333 0.00 0.00 0.00 2.74
161 162 9.924650 TGTAAGTCTTTTTAGAGATTCCACTAC 57.075 33.333 0.00 0.00 0.00 2.73
175 176 8.565416 CCTCCGTTTCTAAATGTAAGTCTTTTT 58.435 33.333 0.00 0.00 0.00 1.94
176 177 7.174426 CCCTCCGTTTCTAAATGTAAGTCTTTT 59.826 37.037 0.00 0.00 0.00 2.27
177 178 6.653740 CCCTCCGTTTCTAAATGTAAGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
178 179 6.013984 TCCCTCCGTTTCTAAATGTAAGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
179 180 5.482878 TCCCTCCGTTTCTAAATGTAAGTCT 59.517 40.000 0.00 0.00 0.00 3.24
180 181 5.727434 TCCCTCCGTTTCTAAATGTAAGTC 58.273 41.667 0.00 0.00 0.00 3.01
181 182 5.247792 ACTCCCTCCGTTTCTAAATGTAAGT 59.752 40.000 0.00 0.00 0.00 2.24
182 183 5.731591 ACTCCCTCCGTTTCTAAATGTAAG 58.268 41.667 0.00 0.00 0.00 2.34
183 184 5.750352 ACTCCCTCCGTTTCTAAATGTAA 57.250 39.130 0.00 0.00 0.00 2.41
184 185 5.954150 AGTACTCCCTCCGTTTCTAAATGTA 59.046 40.000 0.00 0.00 0.00 2.29
185 186 4.776308 AGTACTCCCTCCGTTTCTAAATGT 59.224 41.667 0.00 0.00 0.00 2.71
186 187 5.340439 AGTACTCCCTCCGTTTCTAAATG 57.660 43.478 0.00 0.00 0.00 2.32
187 188 6.267242 GGATAGTACTCCCTCCGTTTCTAAAT 59.733 42.308 0.00 0.00 0.00 1.40
188 189 5.595952 GGATAGTACTCCCTCCGTTTCTAAA 59.404 44.000 0.00 0.00 0.00 1.85
189 190 5.136105 GGATAGTACTCCCTCCGTTTCTAA 58.864 45.833 0.00 0.00 0.00 2.10
190 191 4.166725 TGGATAGTACTCCCTCCGTTTCTA 59.833 45.833 0.00 0.00 34.12 2.10
191 192 3.053095 TGGATAGTACTCCCTCCGTTTCT 60.053 47.826 0.00 0.00 34.12 2.52
192 193 3.294214 TGGATAGTACTCCCTCCGTTTC 58.706 50.000 0.00 0.00 34.12 2.78
193 194 3.297736 CTGGATAGTACTCCCTCCGTTT 58.702 50.000 0.00 0.00 34.12 3.60
194 195 2.946785 CTGGATAGTACTCCCTCCGTT 58.053 52.381 0.00 0.00 34.12 4.44
195 196 1.479021 GCTGGATAGTACTCCCTCCGT 60.479 57.143 0.00 0.00 34.12 4.69
196 197 1.249407 GCTGGATAGTACTCCCTCCG 58.751 60.000 0.00 3.18 34.12 4.63
197 198 1.964933 GTGCTGGATAGTACTCCCTCC 59.035 57.143 0.00 5.38 36.70 4.30
198 199 2.952116 AGTGCTGGATAGTACTCCCTC 58.048 52.381 0.00 0.00 45.20 4.30
204 205 3.566322 ACTCGATGAGTGCTGGATAGTAC 59.434 47.826 0.00 0.00 41.76 2.73
258 259 1.067354 GTGCTCTTGGGAAATGGCAAG 60.067 52.381 0.00 0.00 0.00 4.01
280 282 5.649831 AGAGATCATGTAAGTTTTCAAGCCC 59.350 40.000 0.00 0.00 0.00 5.19
291 293 8.944029 ACACAAAATCTGAAGAGATCATGTAAG 58.056 33.333 0.00 0.00 38.03 2.34
319 321 7.933560 TGTTTCAACGTTGATTATTAATTGCG 58.066 30.769 30.10 0.00 37.00 4.85
363 365 2.623878 TTCTGCTTGTTTGGTACGGA 57.376 45.000 0.00 0.00 0.00 4.69
405 407 6.936900 CCATAGATCCCAACGAGAATAATGTT 59.063 38.462 0.00 0.00 0.00 2.71
438 440 2.290960 ACCCCTTCTGGATGTTAACTGC 60.291 50.000 7.22 0.00 35.39 4.40
442 444 1.638589 CCCACCCCTTCTGGATGTTAA 59.361 52.381 0.00 0.00 35.39 2.01
443 445 1.295020 CCCACCCCTTCTGGATGTTA 58.705 55.000 0.00 0.00 35.39 2.41
451 453 1.229658 CTCTCACCCCACCCCTTCT 60.230 63.158 0.00 0.00 0.00 2.85
454 456 2.452114 CTCTCTCACCCCACCCCT 59.548 66.667 0.00 0.00 0.00 4.79
455 457 3.403558 GCTCTCTCACCCCACCCC 61.404 72.222 0.00 0.00 0.00 4.95
456 458 0.617820 TAAGCTCTCTCACCCCACCC 60.618 60.000 0.00 0.00 0.00 4.61
459 461 0.039180 TCGTAAGCTCTCTCACCCCA 59.961 55.000 0.00 0.00 37.18 4.96
464 471 1.678627 GCTCCATCGTAAGCTCTCTCA 59.321 52.381 0.00 0.00 35.60 3.27
627 634 1.107114 CGACTGATCCTACTGCCACT 58.893 55.000 0.00 0.00 0.00 4.00
629 636 1.393603 CTCGACTGATCCTACTGCCA 58.606 55.000 0.00 0.00 0.00 4.92
697 704 1.280421 GCCATTCCCAGAGACTGTCTT 59.720 52.381 12.27 0.00 30.64 3.01
807 817 0.249280 TCAGAGACGCGCACAAAGAA 60.249 50.000 5.73 0.00 0.00 2.52
808 818 0.038251 ATCAGAGACGCGCACAAAGA 60.038 50.000 5.73 0.00 0.00 2.52
809 819 0.368227 GATCAGAGACGCGCACAAAG 59.632 55.000 5.73 0.00 0.00 2.77
864 874 1.223187 ACCAACAGACGCGTAAAAGG 58.777 50.000 13.97 13.67 0.00 3.11
865 875 3.492011 ACTTACCAACAGACGCGTAAAAG 59.508 43.478 13.97 9.47 0.00 2.27
887 897 3.056678 TCTTGTAGACGGAAAATACGCCA 60.057 43.478 0.00 0.00 34.00 5.69
950 962 4.778143 CACGCGGGGAAGGAAGGG 62.778 72.222 12.47 0.00 0.00 3.95
1087 1099 1.833606 GGGTTTGGTGTTTTGGGGG 59.166 57.895 0.00 0.00 0.00 5.40
1097 1109 0.250597 GAAGGTAGTGCGGGTTTGGT 60.251 55.000 0.00 0.00 0.00 3.67
1308 1327 3.312421 GTGCAGTGTCTACAGAAAGCAAA 59.688 43.478 0.00 0.00 32.03 3.68
1360 1379 2.896443 GCCCCCTTCGACAGAGAG 59.104 66.667 0.00 0.00 0.00 3.20
1376 1395 1.062148 GGCGAACTTGTTTATCTCCGC 59.938 52.381 0.00 0.00 40.54 5.54
1471 1490 4.099881 AGGAAATCTGCAAACAAAAGCTCA 59.900 37.500 0.00 0.00 0.00 4.26
1478 1497 5.596836 AAGACAAGGAAATCTGCAAACAA 57.403 34.783 0.00 0.00 0.00 2.83
1573 1592 5.891551 TGAAGCCCTTTCTTTTACTGAAACT 59.108 36.000 0.00 0.00 36.71 2.66
1702 1721 9.793259 TGTTTTCTCTGGATTGTATAGACTTTT 57.207 29.630 0.00 0.00 0.00 2.27
1711 1732 5.076182 TGGCAATGTTTTCTCTGGATTGTA 58.924 37.500 0.00 0.00 0.00 2.41
1829 1850 3.815401 TGAAGGCTCTAAACAAAGCTCAC 59.185 43.478 0.00 0.00 38.58 3.51
1837 1858 8.946085 CAATATACAACTTGAAGGCTCTAAACA 58.054 33.333 0.00 0.00 0.00 2.83
1880 1901 7.101700 ACTACAAATTACTAGGAAGGGTTTCG 58.898 38.462 0.00 0.00 33.98 3.46
1905 1927 6.290294 GTGGAACTGTGGGAATAGTACTAA 57.710 41.667 6.70 0.00 0.00 2.24
1930 1953 6.373779 ACATGATTGTCTTTAAAGCGTTCAG 58.626 36.000 10.51 7.39 0.00 3.02
1977 2000 7.461749 AGGCCTATAATAATGTGTGCTGTAAT 58.538 34.615 1.29 0.00 0.00 1.89
1989 2012 6.442564 TGTCGGTATGGAAGGCCTATAATAAT 59.557 38.462 5.16 0.00 34.31 1.28
2089 2112 5.506708 ACCTACAACCCCTTGATCATTTAC 58.493 41.667 0.00 0.00 0.00 2.01
2098 2121 4.263771 ACTTTGGATACCTACAACCCCTTG 60.264 45.833 0.00 0.00 0.00 3.61
2128 2151 4.864704 AAGTACATTTCCAATTTGGCGT 57.135 36.364 10.76 7.53 37.47 5.68
2515 2545 5.724854 TCATGGGTTTAGAGGTACTTAAGCT 59.275 40.000 1.29 0.00 41.55 3.74
2566 2596 3.830755 AGTCTAGACAAAGCGGTTCCTAA 59.169 43.478 24.44 0.00 0.00 2.69
2589 2620 4.215613 GGCCAACAAACTACAAGGAGTAAG 59.784 45.833 0.00 0.00 30.92 2.34
2608 2639 1.228245 GACAGCAAACTCAGGGCCA 60.228 57.895 6.18 0.00 0.00 5.36
2660 2691 8.778358 GCTACATATTTTGGATTCAAGTCTAGG 58.222 37.037 0.00 0.00 33.98 3.02
2661 2692 9.553064 AGCTACATATTTTGGATTCAAGTCTAG 57.447 33.333 0.00 0.00 33.98 2.43
2662 2693 9.905713 AAGCTACATATTTTGGATTCAAGTCTA 57.094 29.630 0.00 0.00 33.98 2.59
2663 2694 8.814038 AAGCTACATATTTTGGATTCAAGTCT 57.186 30.769 0.00 0.00 33.98 3.24
2687 2718 5.142061 TCTAGCAGGTGATTGACGTTTAA 57.858 39.130 0.00 0.00 0.00 1.52
2688 2719 4.794278 TCTAGCAGGTGATTGACGTTTA 57.206 40.909 0.00 0.00 0.00 2.01
2712 2743 6.462347 GGCTTAAATTTCCCTCAACTGTTCAA 60.462 38.462 0.00 0.00 0.00 2.69
2727 2758 7.332678 GCTGAATCATCACAAAGGCTTAAATTT 59.667 33.333 0.00 0.00 0.00 1.82
2847 2962 7.230309 GCCAGATAAGCCTAATTTTCTTCTCAT 59.770 37.037 0.00 0.00 0.00 2.90
2856 2971 6.006275 TCTTCTGCCAGATAAGCCTAATTT 57.994 37.500 0.00 0.00 0.00 1.82
2887 3002 7.340256 TCAACAGAAAAGGGAACTACTTACAA 58.660 34.615 0.00 0.00 42.68 2.41
3017 3141 7.828717 TGTTGATTGCACTTATAAGGATCAAGA 59.171 33.333 22.35 20.29 34.03 3.02
3034 3158 5.894807 AGTGCCTGTATTATTGTTGATTGC 58.105 37.500 0.00 0.00 0.00 3.56
3055 3179 2.308570 TGCCAAATGGGTAGATGTGAGT 59.691 45.455 0.90 0.00 39.65 3.41
3113 3237 8.974238 TCCAAAGCAATTTCAGATCTAAATGAT 58.026 29.630 0.00 0.00 38.27 2.45
3160 3285 6.381994 ACATGAATGTCTTAAATTGCCATCCT 59.618 34.615 0.00 0.00 35.87 3.24
3234 3359 4.923893 TGCATTGACTATATTGCTGCAAC 58.076 39.130 18.51 4.31 35.42 4.17
3286 3411 2.979813 GCAAACTCGTGCAGTAAATTGG 59.020 45.455 0.00 0.00 44.29 3.16
3293 3418 1.961793 TAAAGGCAAACTCGTGCAGT 58.038 45.000 0.00 0.00 46.81 4.40
3375 3500 7.173218 TGTTTTGCTTCGTGATCTAGAAAGAAT 59.827 33.333 0.00 0.00 34.73 2.40
3430 3555 1.147153 TGCAACACGGACCACATCA 59.853 52.632 0.00 0.00 0.00 3.07
3567 3692 1.069090 GAGTCTGGTGGTTGTCGCA 59.931 57.895 0.00 0.00 0.00 5.10
3642 3767 5.921408 GGTATTCCTTTGTACTGATAGAGCG 59.079 44.000 0.00 0.00 0.00 5.03
3668 3793 1.261619 CCACGAGTCTGAAAACACAGC 59.738 52.381 0.00 0.00 37.75 4.40
3670 3795 1.483004 TCCCACGAGTCTGAAAACACA 59.517 47.619 0.00 0.00 0.00 3.72
3672 3797 2.549992 CCATCCCACGAGTCTGAAAACA 60.550 50.000 0.00 0.00 0.00 2.83
3680 3805 2.487934 CATCATTCCATCCCACGAGTC 58.512 52.381 0.00 0.00 0.00 3.36
3683 3808 0.545646 TGCATCATTCCATCCCACGA 59.454 50.000 0.00 0.00 0.00 4.35
3698 3824 3.350833 CAGTTTCTTTAGAGGCCTGCAT 58.649 45.455 12.00 0.00 0.00 3.96
3701 3827 2.783135 TGCAGTTTCTTTAGAGGCCTG 58.217 47.619 12.00 0.00 0.00 4.85
3704 3830 4.488879 CCAATTGCAGTTTCTTTAGAGGC 58.511 43.478 0.00 0.00 0.00 4.70
3718 3844 1.672441 GGAGATTTTGCGCCAATTGCA 60.672 47.619 4.18 0.00 41.33 4.08
3750 3876 6.075315 AGAGGGGCTAAAAACAAGTAAACAT 58.925 36.000 0.00 0.00 0.00 2.71
3784 3910 0.739813 AAAAATCTCCCGGCGAGTCG 60.740 55.000 9.30 8.54 39.84 4.18
3789 3915 1.241315 ACCACAAAAATCTCCCGGCG 61.241 55.000 0.00 0.00 0.00 6.46
3791 3917 0.887933 CCACCACAAAAATCTCCCGG 59.112 55.000 0.00 0.00 0.00 5.73
3797 3923 3.392882 CCTTTCAGCCACCACAAAAATC 58.607 45.455 0.00 0.00 0.00 2.17
3798 3924 2.485302 GCCTTTCAGCCACCACAAAAAT 60.485 45.455 0.00 0.00 0.00 1.82
3848 3975 6.978343 TTATAGAAACACATACAGCACACC 57.022 37.500 0.00 0.00 0.00 4.16
3858 3985 9.801873 GCACCATAAACATTTATAGAAACACAT 57.198 29.630 0.00 0.00 32.39 3.21
3939 4066 1.376295 ATCCACACGGCGGTTAACC 60.376 57.895 15.13 15.13 0.00 2.85
3966 4093 2.412847 GCAAGTTAGTTCCATGTCACGC 60.413 50.000 0.00 0.00 0.00 5.34
3967 4094 2.159627 GGCAAGTTAGTTCCATGTCACG 59.840 50.000 0.00 0.00 0.00 4.35
4042 4169 5.663456 GCATTTCCTCCAAGCAATAATTCA 58.337 37.500 0.00 0.00 0.00 2.57
4070 4198 0.767375 AGAACTTGCTTCCTGCTCCA 59.233 50.000 0.00 0.00 43.37 3.86
4100 4239 1.729472 CGATGAATACGAGGGCTAGCG 60.729 57.143 9.00 0.00 0.00 4.26
4136 5640 0.533755 GTCCACTTCAGTGCAGTGCT 60.534 55.000 16.44 0.00 44.34 4.40
4190 5695 2.113433 CAGGCTCCTCATGCAGCAC 61.113 63.158 0.00 3.68 37.38 4.40
4217 5722 3.996363 GGATCAAAACAGTGAATTTGGCC 59.004 43.478 19.01 17.00 37.19 5.36
4218 5723 4.886579 AGGATCAAAACAGTGAATTTGGC 58.113 39.130 19.01 13.78 37.19 4.52
4219 5724 7.280652 ACAAAAGGATCAAAACAGTGAATTTGG 59.719 33.333 19.01 1.59 37.19 3.28
4220 5725 8.117988 CACAAAAGGATCAAAACAGTGAATTTG 58.882 33.333 15.45 15.45 37.77 2.32
4221 5726 7.201635 GCACAAAAGGATCAAAACAGTGAATTT 60.202 33.333 0.00 0.00 0.00 1.82
4222 5727 6.258507 GCACAAAAGGATCAAAACAGTGAATT 59.741 34.615 0.00 0.00 0.00 2.17
4223 5728 5.754890 GCACAAAAGGATCAAAACAGTGAAT 59.245 36.000 0.00 0.00 0.00 2.57
4224 5729 5.108517 GCACAAAAGGATCAAAACAGTGAA 58.891 37.500 0.00 0.00 0.00 3.18
4225 5730 4.159321 TGCACAAAAGGATCAAAACAGTGA 59.841 37.500 0.00 0.00 0.00 3.41
4226 5731 4.268405 GTGCACAAAAGGATCAAAACAGTG 59.732 41.667 13.17 0.00 0.00 3.66
4227 5732 4.432712 GTGCACAAAAGGATCAAAACAGT 58.567 39.130 13.17 0.00 0.00 3.55
4228 5733 3.486841 CGTGCACAAAAGGATCAAAACAG 59.513 43.478 18.64 0.00 0.00 3.16
4229 5734 3.119316 ACGTGCACAAAAGGATCAAAACA 60.119 39.130 18.64 0.00 0.00 2.83
4230 5735 3.443976 ACGTGCACAAAAGGATCAAAAC 58.556 40.909 18.64 0.00 0.00 2.43
4231 5736 3.791973 ACGTGCACAAAAGGATCAAAA 57.208 38.095 18.64 0.00 0.00 2.44
4232 5737 3.791973 AACGTGCACAAAAGGATCAAA 57.208 38.095 18.64 0.00 0.00 2.69
4233 5738 4.791411 GCTTAACGTGCACAAAAGGATCAA 60.791 41.667 18.64 0.00 0.00 2.57
4234 5739 3.304391 GCTTAACGTGCACAAAAGGATCA 60.304 43.478 18.64 0.00 0.00 2.92
4235 5740 3.234386 GCTTAACGTGCACAAAAGGATC 58.766 45.455 18.64 1.19 0.00 3.36
4236 5741 2.030274 GGCTTAACGTGCACAAAAGGAT 60.030 45.455 18.64 0.00 0.00 3.24
4237 5742 1.335496 GGCTTAACGTGCACAAAAGGA 59.665 47.619 18.64 0.00 0.00 3.36
4238 5743 1.766069 GGCTTAACGTGCACAAAAGG 58.234 50.000 18.64 2.02 0.00 3.11
4239 5744 1.394697 CGGCTTAACGTGCACAAAAG 58.605 50.000 18.64 16.49 0.00 2.27
4240 5745 0.592754 GCGGCTTAACGTGCACAAAA 60.593 50.000 18.64 6.50 35.98 2.44
4241 5746 1.009449 GCGGCTTAACGTGCACAAA 60.009 52.632 18.64 6.87 35.98 2.83
4242 5747 1.511318 ATGCGGCTTAACGTGCACAA 61.511 50.000 18.64 2.53 40.61 3.33
4243 5748 1.906994 GATGCGGCTTAACGTGCACA 61.907 55.000 18.64 0.00 40.61 4.57
4244 5749 1.226018 GATGCGGCTTAACGTGCAC 60.226 57.895 6.82 6.82 40.61 4.57
4245 5750 1.375396 AGATGCGGCTTAACGTGCA 60.375 52.632 0.00 0.00 42.22 4.57
4246 5751 1.060937 CAGATGCGGCTTAACGTGC 59.939 57.895 0.00 0.00 35.98 5.34
4247 5752 0.370273 GTCAGATGCGGCTTAACGTG 59.630 55.000 0.00 0.00 35.98 4.49
4248 5753 0.739813 GGTCAGATGCGGCTTAACGT 60.740 55.000 0.00 0.00 35.98 3.99
4249 5754 1.429148 GGGTCAGATGCGGCTTAACG 61.429 60.000 0.00 0.00 0.00 3.18
4250 5755 1.095807 GGGGTCAGATGCGGCTTAAC 61.096 60.000 0.00 0.00 0.00 2.01
4251 5756 1.223487 GGGGTCAGATGCGGCTTAA 59.777 57.895 0.00 0.00 0.00 1.85
4252 5757 1.686325 GAGGGGTCAGATGCGGCTTA 61.686 60.000 0.00 0.00 0.00 3.09
4253 5758 3.011517 AGGGGTCAGATGCGGCTT 61.012 61.111 0.00 0.00 0.00 4.35
4254 5759 3.474570 GAGGGGTCAGATGCGGCT 61.475 66.667 0.00 0.00 0.00 5.52
4255 5760 3.474570 AGAGGGGTCAGATGCGGC 61.475 66.667 0.00 0.00 0.00 6.53
4256 5761 2.503061 CAGAGGGGTCAGATGCGG 59.497 66.667 0.00 0.00 0.00 5.69
4257 5762 2.503061 CCAGAGGGGTCAGATGCG 59.497 66.667 0.00 0.00 0.00 4.73
4279 5784 5.047306 GGAAAAGGGTCAGATCCGAATTTTT 60.047 40.000 0.00 0.00 0.00 1.94
4280 5785 4.462834 GGAAAAGGGTCAGATCCGAATTTT 59.537 41.667 0.00 0.00 0.00 1.82
4281 5786 4.017126 GGAAAAGGGTCAGATCCGAATTT 58.983 43.478 0.00 0.00 0.00 1.82
4282 5787 3.267031 AGGAAAAGGGTCAGATCCGAATT 59.733 43.478 0.00 0.00 35.31 2.17
4283 5788 2.846827 AGGAAAAGGGTCAGATCCGAAT 59.153 45.455 0.00 0.00 35.31 3.34
4284 5789 2.266279 AGGAAAAGGGTCAGATCCGAA 58.734 47.619 0.00 0.00 35.31 4.30
4285 5790 1.952621 AGGAAAAGGGTCAGATCCGA 58.047 50.000 0.00 0.00 35.31 4.55
4286 5791 2.158943 GGTAGGAAAAGGGTCAGATCCG 60.159 54.545 0.00 0.00 35.31 4.18
4287 5792 2.158943 CGGTAGGAAAAGGGTCAGATCC 60.159 54.545 0.00 0.00 0.00 3.36
4288 5793 2.742204 GCGGTAGGAAAAGGGTCAGATC 60.742 54.545 0.00 0.00 0.00 2.75
4289 5794 1.209747 GCGGTAGGAAAAGGGTCAGAT 59.790 52.381 0.00 0.00 0.00 2.90
4290 5795 0.611714 GCGGTAGGAAAAGGGTCAGA 59.388 55.000 0.00 0.00 0.00 3.27
4291 5796 0.392595 GGCGGTAGGAAAAGGGTCAG 60.393 60.000 0.00 0.00 0.00 3.51
4292 5797 1.681076 GGCGGTAGGAAAAGGGTCA 59.319 57.895 0.00 0.00 0.00 4.02
4293 5798 1.449070 CGGCGGTAGGAAAAGGGTC 60.449 63.158 0.00 0.00 0.00 4.46
4294 5799 2.666812 CGGCGGTAGGAAAAGGGT 59.333 61.111 0.00 0.00 0.00 4.34
4295 5800 2.822701 GCGGCGGTAGGAAAAGGG 60.823 66.667 9.78 0.00 0.00 3.95
4296 5801 2.822701 GGCGGCGGTAGGAAAAGG 60.823 66.667 9.78 0.00 0.00 3.11
4297 5802 2.046700 TGGCGGCGGTAGGAAAAG 60.047 61.111 9.78 0.00 0.00 2.27
4298 5803 2.046700 CTGGCGGCGGTAGGAAAA 60.047 61.111 9.78 0.00 0.00 2.29
4299 5804 4.770874 GCTGGCGGCGGTAGGAAA 62.771 66.667 20.06 0.00 0.00 3.13
4313 5818 2.759973 TCCCTACCGCCAGAGCTG 60.760 66.667 0.00 0.00 36.60 4.24
4314 5819 2.760385 GTCCCTACCGCCAGAGCT 60.760 66.667 0.00 0.00 36.60 4.09
4315 5820 3.851128 GGTCCCTACCGCCAGAGC 61.851 72.222 0.00 0.00 35.62 4.09
4323 5828 2.984623 GTTGACCGGGTCCCTACC 59.015 66.667 23.81 4.08 45.97 3.18
4324 5829 2.218037 GACGTTGACCGGGTCCCTAC 62.218 65.000 23.81 16.91 42.24 3.18
4325 5830 1.978617 GACGTTGACCGGGTCCCTA 60.979 63.158 23.81 7.14 42.24 3.53
4326 5831 3.308705 GACGTTGACCGGGTCCCT 61.309 66.667 23.81 3.84 42.24 4.20
4327 5832 4.729856 CGACGTTGACCGGGTCCC 62.730 72.222 23.81 13.40 42.24 4.46
4328 5833 2.998279 ATCGACGTTGACCGGGTCC 61.998 63.158 23.81 8.91 42.24 4.46
4329 5834 1.804326 CATCGACGTTGACCGGGTC 60.804 63.158 20.36 20.36 42.24 4.46
4330 5835 2.260434 CATCGACGTTGACCGGGT 59.740 61.111 7.89 0.00 42.24 5.28
4331 5836 2.508439 CCATCGACGTTGACCGGG 60.508 66.667 7.89 6.62 42.24 5.73
4332 5837 3.186047 GCCATCGACGTTGACCGG 61.186 66.667 7.89 12.82 42.24 5.28
4333 5838 3.541831 CGCCATCGACGTTGACCG 61.542 66.667 7.89 7.73 44.03 4.79
4334 5839 3.849953 GCGCCATCGACGTTGACC 61.850 66.667 7.89 0.00 38.10 4.02
4335 5840 3.849953 GGCGCCATCGACGTTGAC 61.850 66.667 24.80 0.00 38.10 3.18
4348 5853 4.129737 TCAGTAGGCAGACGGCGC 62.130 66.667 6.90 0.00 46.16 6.53
4349 5854 2.202623 GTCAGTAGGCAGACGGCG 60.203 66.667 4.80 4.80 46.16 6.46
4353 5858 0.818296 ATCCACGTCAGTAGGCAGAC 59.182 55.000 0.00 0.00 0.00 3.51
4354 5859 2.430248 TATCCACGTCAGTAGGCAGA 57.570 50.000 0.00 0.00 0.00 4.26
4355 5860 2.427453 ACTTATCCACGTCAGTAGGCAG 59.573 50.000 0.00 0.00 0.00 4.85
4356 5861 2.165641 CACTTATCCACGTCAGTAGGCA 59.834 50.000 0.00 0.00 0.00 4.75
4357 5862 2.481449 CCACTTATCCACGTCAGTAGGC 60.481 54.545 0.00 0.00 0.00 3.93
4358 5863 2.481449 GCCACTTATCCACGTCAGTAGG 60.481 54.545 0.00 0.00 0.00 3.18
4359 5864 2.427453 AGCCACTTATCCACGTCAGTAG 59.573 50.000 0.00 0.00 0.00 2.57
4360 5865 2.453521 AGCCACTTATCCACGTCAGTA 58.546 47.619 0.00 0.00 0.00 2.74
4361 5866 1.267121 AGCCACTTATCCACGTCAGT 58.733 50.000 0.00 0.00 0.00 3.41
4362 5867 2.481449 GGTAGCCACTTATCCACGTCAG 60.481 54.545 0.00 0.00 0.00 3.51
4363 5868 1.479323 GGTAGCCACTTATCCACGTCA 59.521 52.381 0.00 0.00 0.00 4.35
4364 5869 1.535437 CGGTAGCCACTTATCCACGTC 60.535 57.143 0.00 0.00 0.00 4.34
4365 5870 0.458669 CGGTAGCCACTTATCCACGT 59.541 55.000 0.00 0.00 0.00 4.49
4366 5871 0.874607 GCGGTAGCCACTTATCCACG 60.875 60.000 0.00 0.00 37.42 4.94
4367 5872 2.987752 GCGGTAGCCACTTATCCAC 58.012 57.895 0.00 0.00 37.42 4.02
4387 5892 3.849951 CCTATCGCCACGGCCAGT 61.850 66.667 2.24 0.00 37.98 4.00
4388 5893 3.792053 GACCTATCGCCACGGCCAG 62.792 68.421 2.24 0.00 37.98 4.85
4389 5894 2.914756 TAGACCTATCGCCACGGCCA 62.915 60.000 2.24 0.00 37.98 5.36
4390 5895 2.143594 CTAGACCTATCGCCACGGCC 62.144 65.000 1.63 0.00 37.98 6.13
4391 5896 1.286260 CTAGACCTATCGCCACGGC 59.714 63.158 0.00 0.00 37.85 5.68
4392 5897 1.957562 CCTAGACCTATCGCCACGG 59.042 63.158 0.00 0.00 0.00 4.94
4393 5898 1.286260 GCCTAGACCTATCGCCACG 59.714 63.158 0.00 0.00 0.00 4.94
4394 5899 0.315568 CTGCCTAGACCTATCGCCAC 59.684 60.000 0.00 0.00 0.00 5.01
4395 5900 1.464376 GCTGCCTAGACCTATCGCCA 61.464 60.000 0.00 0.00 0.00 5.69
4396 5901 1.290639 GCTGCCTAGACCTATCGCC 59.709 63.158 0.00 0.00 0.00 5.54
4397 5902 1.182385 AGGCTGCCTAGACCTATCGC 61.182 60.000 21.98 0.00 31.45 4.58
4398 5903 1.271102 GAAGGCTGCCTAGACCTATCG 59.729 57.143 23.69 0.00 32.46 2.92
4399 5904 1.621317 GGAAGGCTGCCTAGACCTATC 59.379 57.143 23.69 13.55 32.46 2.08
4400 5905 1.723288 GGAAGGCTGCCTAGACCTAT 58.277 55.000 23.69 3.63 32.46 2.57
4401 5906 0.755698 CGGAAGGCTGCCTAGACCTA 60.756 60.000 23.69 0.00 32.46 3.08
4402 5907 2.060980 CGGAAGGCTGCCTAGACCT 61.061 63.158 23.69 5.39 33.62 3.85
4403 5908 2.501610 CGGAAGGCTGCCTAGACC 59.498 66.667 23.69 22.35 31.13 3.85
4404 5909 2.202946 GCGGAAGGCTGCCTAGAC 60.203 66.667 23.69 15.76 40.63 2.59
4421 5926 3.064987 CTACCGCCACCGTCTCTGG 62.065 68.421 0.00 0.00 0.00 3.86
4422 5927 1.384989 ATCTACCGCCACCGTCTCTG 61.385 60.000 0.00 0.00 0.00 3.35
4423 5928 1.076923 ATCTACCGCCACCGTCTCT 60.077 57.895 0.00 0.00 0.00 3.10
4424 5929 1.065928 CATCTACCGCCACCGTCTC 59.934 63.158 0.00 0.00 0.00 3.36
4425 5930 3.077519 GCATCTACCGCCACCGTCT 62.078 63.158 0.00 0.00 0.00 4.18
4426 5931 2.585247 GCATCTACCGCCACCGTC 60.585 66.667 0.00 0.00 0.00 4.79
4433 5938 0.179163 GCACAAAAGGCATCTACCGC 60.179 55.000 0.00 0.00 33.69 5.68
4434 5939 1.453155 AGCACAAAAGGCATCTACCG 58.547 50.000 0.00 0.00 33.69 4.02
4435 5940 2.094545 CCAAGCACAAAAGGCATCTACC 60.095 50.000 0.00 0.00 0.00 3.18
4436 5941 2.558359 ACCAAGCACAAAAGGCATCTAC 59.442 45.455 0.00 0.00 0.00 2.59
4437 5942 2.557924 CACCAAGCACAAAAGGCATCTA 59.442 45.455 0.00 0.00 0.00 1.98
4438 5943 1.342174 CACCAAGCACAAAAGGCATCT 59.658 47.619 0.00 0.00 0.00 2.90
4439 5944 1.606224 CCACCAAGCACAAAAGGCATC 60.606 52.381 0.00 0.00 0.00 3.91
4440 5945 0.393820 CCACCAAGCACAAAAGGCAT 59.606 50.000 0.00 0.00 0.00 4.40
4441 5946 1.821936 CCACCAAGCACAAAAGGCA 59.178 52.632 0.00 0.00 0.00 4.75
4442 5947 1.595109 GCCACCAAGCACAAAAGGC 60.595 57.895 0.00 0.00 0.00 4.35
4443 5948 0.249573 CAGCCACCAAGCACAAAAGG 60.250 55.000 0.00 0.00 34.23 3.11
4444 5949 0.877213 GCAGCCACCAAGCACAAAAG 60.877 55.000 0.00 0.00 34.23 2.27
4445 5950 1.143620 GCAGCCACCAAGCACAAAA 59.856 52.632 0.00 0.00 34.23 2.44
4446 5951 2.813901 GCAGCCACCAAGCACAAA 59.186 55.556 0.00 0.00 34.23 2.83
4447 5952 3.594775 CGCAGCCACCAAGCACAA 61.595 61.111 0.00 0.00 34.23 3.33
4472 5977 4.994756 GTTGGTGGGTGGGGCAGG 62.995 72.222 0.00 0.00 0.00 4.85
4473 5978 4.994756 GGTTGGTGGGTGGGGCAG 62.995 72.222 0.00 0.00 0.00 4.85
4477 5982 4.212797 AACGGGTTGGTGGGTGGG 62.213 66.667 0.00 0.00 0.00 4.61
4478 5983 2.596338 GAACGGGTTGGTGGGTGG 60.596 66.667 0.00 0.00 0.00 4.61
4479 5984 1.152839 AAGAACGGGTTGGTGGGTG 60.153 57.895 0.00 0.00 0.00 4.61
4480 5985 1.149854 GAAGAACGGGTTGGTGGGT 59.850 57.895 0.00 0.00 0.00 4.51
4481 5986 1.602605 GGAAGAACGGGTTGGTGGG 60.603 63.158 0.00 0.00 0.00 4.61
4482 5987 0.605589 GAGGAAGAACGGGTTGGTGG 60.606 60.000 0.00 0.00 0.00 4.61
4483 5988 0.605589 GGAGGAAGAACGGGTTGGTG 60.606 60.000 0.00 0.00 0.00 4.17
4484 5989 0.767060 AGGAGGAAGAACGGGTTGGT 60.767 55.000 0.00 0.00 0.00 3.67
4485 5990 0.036294 GAGGAGGAAGAACGGGTTGG 60.036 60.000 0.00 0.00 0.00 3.77
4486 5991 0.036294 GGAGGAGGAAGAACGGGTTG 60.036 60.000 0.00 0.00 0.00 3.77
4487 5992 1.199425 GGGAGGAGGAAGAACGGGTT 61.199 60.000 0.00 0.00 0.00 4.11
4488 5993 1.612739 GGGAGGAGGAAGAACGGGT 60.613 63.158 0.00 0.00 0.00 5.28
4489 5994 2.368011 GGGGAGGAGGAAGAACGGG 61.368 68.421 0.00 0.00 0.00 5.28
4490 5995 1.306226 AGGGGAGGAGGAAGAACGG 60.306 63.158 0.00 0.00 0.00 4.44
4491 5996 1.668101 CGAGGGGAGGAGGAAGAACG 61.668 65.000 0.00 0.00 0.00 3.95
4492 5997 0.324460 TCGAGGGGAGGAGGAAGAAC 60.324 60.000 0.00 0.00 0.00 3.01
4493 5998 0.637195 ATCGAGGGGAGGAGGAAGAA 59.363 55.000 0.00 0.00 0.00 2.52
4494 5999 0.186386 GATCGAGGGGAGGAGGAAGA 59.814 60.000 0.00 0.00 0.00 2.87
4495 6000 1.175983 CGATCGAGGGGAGGAGGAAG 61.176 65.000 10.26 0.00 0.00 3.46
4496 6001 1.152735 CGATCGAGGGGAGGAGGAA 60.153 63.158 10.26 0.00 0.00 3.36
4497 6002 1.642513 TTCGATCGAGGGGAGGAGGA 61.643 60.000 18.54 0.00 0.00 3.71
4498 6003 1.152735 TTCGATCGAGGGGAGGAGG 60.153 63.158 18.54 0.00 0.00 4.30
4499 6004 0.752009 TGTTCGATCGAGGGGAGGAG 60.752 60.000 18.54 0.00 0.00 3.69
4500 6005 0.752009 CTGTTCGATCGAGGGGAGGA 60.752 60.000 18.54 0.00 0.00 3.71
4501 6006 0.752009 TCTGTTCGATCGAGGGGAGG 60.752 60.000 18.54 7.02 0.00 4.30
4502 6007 0.665835 CTCTGTTCGATCGAGGGGAG 59.334 60.000 18.54 19.67 0.00 4.30
4503 6008 0.752009 CCTCTGTTCGATCGAGGGGA 60.752 60.000 18.54 15.01 40.47 4.81
4504 6009 1.736586 CCTCTGTTCGATCGAGGGG 59.263 63.158 18.54 12.55 40.47 4.79
4505 6010 1.066587 GCCTCTGTTCGATCGAGGG 59.933 63.158 18.54 15.92 43.56 4.30
4506 6011 1.298713 CGCCTCTGTTCGATCGAGG 60.299 63.158 18.54 16.15 45.59 4.63
4507 6012 0.316607 CTCGCCTCTGTTCGATCGAG 60.317 60.000 18.54 7.22 37.87 4.04
4508 6013 1.722082 CTCGCCTCTGTTCGATCGA 59.278 57.895 15.15 15.15 33.98 3.59
4509 6014 1.941734 GCTCGCCTCTGTTCGATCG 60.942 63.158 9.36 9.36 33.98 3.69
4510 6015 1.941734 CGCTCGCCTCTGTTCGATC 60.942 63.158 0.00 0.00 33.98 3.69
4511 6016 2.103143 CGCTCGCCTCTGTTCGAT 59.897 61.111 0.00 0.00 33.98 3.59
4512 6017 4.116328 CCGCTCGCCTCTGTTCGA 62.116 66.667 0.00 0.00 0.00 3.71
4528 6033 3.223589 GAGGAGGAGAGAGGCGCC 61.224 72.222 21.89 21.89 36.60 6.53
4529 6034 3.223589 GGAGGAGGAGAGAGGCGC 61.224 72.222 0.00 0.00 0.00 6.53
4530 6035 2.520741 GGGAGGAGGAGAGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
4531 6036 2.366153 ATCGGGAGGAGGAGAGAGGC 62.366 65.000 0.00 0.00 0.00 4.70
4532 6037 0.251165 GATCGGGAGGAGGAGAGAGG 60.251 65.000 0.00 0.00 0.00 3.69
4533 6038 0.251165 GGATCGGGAGGAGGAGAGAG 60.251 65.000 0.00 0.00 0.00 3.20
4534 6039 1.721093 GGGATCGGGAGGAGGAGAGA 61.721 65.000 0.00 0.00 0.00 3.10
4535 6040 1.228737 GGGATCGGGAGGAGGAGAG 60.229 68.421 0.00 0.00 0.00 3.20
4536 6041 2.780185 GGGGATCGGGAGGAGGAGA 61.780 68.421 0.00 0.00 0.00 3.71
4537 6042 2.203714 GGGGATCGGGAGGAGGAG 60.204 72.222 0.00 0.00 0.00 3.69
4538 6043 2.704198 AGGGGATCGGGAGGAGGA 60.704 66.667 0.00 0.00 0.00 3.71
4539 6044 2.203714 GAGGGGATCGGGAGGAGG 60.204 72.222 0.00 0.00 0.00 4.30
4540 6045 2.203714 GGAGGGGATCGGGAGGAG 60.204 72.222 0.00 0.00 0.00 3.69
4541 6046 3.846254 GGGAGGGGATCGGGAGGA 61.846 72.222 0.00 0.00 0.00 3.71
4542 6047 3.837213 GAGGGAGGGGATCGGGAGG 62.837 73.684 0.00 0.00 0.00 4.30
4543 6048 2.203714 GAGGGAGGGGATCGGGAG 60.204 72.222 0.00 0.00 0.00 4.30
4544 6049 4.220163 CGAGGGAGGGGATCGGGA 62.220 72.222 0.00 0.00 32.93 5.14
4545 6050 3.531456 ATCGAGGGAGGGGATCGGG 62.531 68.421 0.00 0.00 37.08 5.14
4546 6051 1.979693 GATCGAGGGAGGGGATCGG 60.980 68.421 0.00 0.00 37.08 4.18
4547 6052 0.963355 GAGATCGAGGGAGGGGATCG 60.963 65.000 0.00 0.00 41.06 3.69
4548 6053 0.613572 GGAGATCGAGGGAGGGGATC 60.614 65.000 0.00 0.00 37.44 3.36
4549 6054 1.467432 GGAGATCGAGGGAGGGGAT 59.533 63.158 0.00 0.00 0.00 3.85
4550 6055 2.780185 GGGAGATCGAGGGAGGGGA 61.780 68.421 0.00 0.00 0.00 4.81
4551 6056 2.203714 GGGAGATCGAGGGAGGGG 60.204 72.222 0.00 0.00 0.00 4.79
4552 6057 1.228737 GAGGGAGATCGAGGGAGGG 60.229 68.421 0.00 0.00 0.00 4.30
4553 6058 0.187361 AAGAGGGAGATCGAGGGAGG 59.813 60.000 0.00 0.00 0.00 4.30
4554 6059 1.616159 GAAGAGGGAGATCGAGGGAG 58.384 60.000 0.00 0.00 0.00 4.30
4555 6060 0.186386 GGAAGAGGGAGATCGAGGGA 59.814 60.000 0.00 0.00 0.00 4.20
4556 6061 0.830023 GGGAAGAGGGAGATCGAGGG 60.830 65.000 0.00 0.00 0.00 4.30
4557 6062 0.187361 AGGGAAGAGGGAGATCGAGG 59.813 60.000 0.00 0.00 0.00 4.63
4558 6063 1.960689 GAAGGGAAGAGGGAGATCGAG 59.039 57.143 0.00 0.00 0.00 4.04
4559 6064 1.288037 TGAAGGGAAGAGGGAGATCGA 59.712 52.381 0.00 0.00 0.00 3.59
4560 6065 1.410882 GTGAAGGGAAGAGGGAGATCG 59.589 57.143 0.00 0.00 0.00 3.69
4561 6066 1.765904 GGTGAAGGGAAGAGGGAGATC 59.234 57.143 0.00 0.00 0.00 2.75
4562 6067 1.081174 TGGTGAAGGGAAGAGGGAGAT 59.919 52.381 0.00 0.00 0.00 2.75
4563 6068 0.491823 TGGTGAAGGGAAGAGGGAGA 59.508 55.000 0.00 0.00 0.00 3.71
4564 6069 1.589414 ATGGTGAAGGGAAGAGGGAG 58.411 55.000 0.00 0.00 0.00 4.30
4565 6070 2.059756 AATGGTGAAGGGAAGAGGGA 57.940 50.000 0.00 0.00 0.00 4.20
4566 6071 2.907458 AAATGGTGAAGGGAAGAGGG 57.093 50.000 0.00 0.00 0.00 4.30
4567 6072 2.749621 CGAAAATGGTGAAGGGAAGAGG 59.250 50.000 0.00 0.00 0.00 3.69
4568 6073 2.162408 GCGAAAATGGTGAAGGGAAGAG 59.838 50.000 0.00 0.00 0.00 2.85
4569 6074 2.159382 GCGAAAATGGTGAAGGGAAGA 58.841 47.619 0.00 0.00 0.00 2.87
4570 6075 1.135689 CGCGAAAATGGTGAAGGGAAG 60.136 52.381 0.00 0.00 0.00 3.46
4571 6076 0.878416 CGCGAAAATGGTGAAGGGAA 59.122 50.000 0.00 0.00 0.00 3.97
4572 6077 0.958382 CCGCGAAAATGGTGAAGGGA 60.958 55.000 8.23 0.00 0.00 4.20
4573 6078 0.958382 TCCGCGAAAATGGTGAAGGG 60.958 55.000 8.23 0.00 0.00 3.95
4574 6079 1.064060 GATCCGCGAAAATGGTGAAGG 59.936 52.381 8.23 0.00 0.00 3.46
4575 6080 2.009774 AGATCCGCGAAAATGGTGAAG 58.990 47.619 8.23 0.00 0.00 3.02
4576 6081 2.107950 AGATCCGCGAAAATGGTGAA 57.892 45.000 8.23 0.00 0.00 3.18
4577 6082 2.107950 AAGATCCGCGAAAATGGTGA 57.892 45.000 8.23 0.00 0.00 4.02
4578 6083 2.518949 CAAAGATCCGCGAAAATGGTG 58.481 47.619 8.23 0.00 0.00 4.17
4579 6084 1.472480 CCAAAGATCCGCGAAAATGGT 59.528 47.619 8.23 0.00 0.00 3.55
4580 6085 1.202290 CCCAAAGATCCGCGAAAATGG 60.202 52.381 8.23 8.16 0.00 3.16
4581 6086 1.202290 CCCCAAAGATCCGCGAAAATG 60.202 52.381 8.23 0.00 0.00 2.32
4582 6087 1.102978 CCCCAAAGATCCGCGAAAAT 58.897 50.000 8.23 0.00 0.00 1.82
4583 6088 1.591504 GCCCCAAAGATCCGCGAAAA 61.592 55.000 8.23 0.00 0.00 2.29
4584 6089 2.043980 GCCCCAAAGATCCGCGAAA 61.044 57.895 8.23 0.00 0.00 3.46
4585 6090 2.437716 GCCCCAAAGATCCGCGAA 60.438 61.111 8.23 0.00 0.00 4.70
4586 6091 2.756321 TTTGCCCCAAAGATCCGCGA 62.756 55.000 8.23 0.00 0.00 5.87
4587 6092 1.666209 ATTTGCCCCAAAGATCCGCG 61.666 55.000 0.00 0.00 36.76 6.46
4588 6093 0.103026 GATTTGCCCCAAAGATCCGC 59.897 55.000 0.00 0.00 36.76 5.54
4589 6094 1.473258 TGATTTGCCCCAAAGATCCG 58.527 50.000 0.00 0.00 36.76 4.18
4590 6095 3.979101 TTTGATTTGCCCCAAAGATCC 57.021 42.857 0.00 0.00 36.76 3.36
4594 6099 2.613725 GCCTCTTTGATTTGCCCCAAAG 60.614 50.000 0.00 0.00 46.30 2.77
4595 6100 1.347378 GCCTCTTTGATTTGCCCCAAA 59.653 47.619 0.00 0.00 37.75 3.28
4596 6101 0.975887 GCCTCTTTGATTTGCCCCAA 59.024 50.000 0.00 0.00 0.00 4.12
4597 6102 0.904394 GGCCTCTTTGATTTGCCCCA 60.904 55.000 0.00 0.00 36.07 4.96
4598 6103 1.900351 GGCCTCTTTGATTTGCCCC 59.100 57.895 0.00 0.00 36.07 5.80
4599 6104 1.512694 CGGCCTCTTTGATTTGCCC 59.487 57.895 0.00 0.00 38.92 5.36
4600 6105 1.512694 CCGGCCTCTTTGATTTGCC 59.487 57.895 0.00 0.00 38.74 4.52
4601 6106 1.153765 GCCGGCCTCTTTGATTTGC 60.154 57.895 18.11 0.00 0.00 3.68
4602 6107 0.602562 TTGCCGGCCTCTTTGATTTG 59.397 50.000 26.77 0.00 0.00 2.32
4603 6108 3.050089 TTGCCGGCCTCTTTGATTT 57.950 47.368 26.77 0.00 0.00 2.17
4604 6109 4.841441 TTGCCGGCCTCTTTGATT 57.159 50.000 26.77 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.