Multiple sequence alignment - TraesCS1B01G199300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G199300 chr1B 100.000 3811 0 0 1 3811 357424612 357428422 0.000000e+00 7038.0
1 TraesCS1B01G199300 chr1B 93.023 86 6 0 3397 3482 418814974 418815059 4.000000e-25 126.0
2 TraesCS1B01G199300 chr1B 91.176 68 6 0 3391 3458 171232530 171232597 4.050000e-15 93.5
3 TraesCS1B01G199300 chr1D 93.246 3272 126 38 167 3390 255494775 255491551 0.000000e+00 4730.0
4 TraesCS1B01G199300 chr1D 91.617 167 3 1 1 167 255495831 255495676 1.780000e-53 220.0
5 TraesCS1B01G199300 chr1A 90.486 2796 121 52 671 3390 327531754 327529028 0.000000e+00 3555.0
6 TraesCS1B01G199300 chr1A 95.714 630 19 3 1 627 327532383 327531759 0.000000e+00 1007.0
7 TraesCS1B01G199300 chr7B 98.387 310 2 3 3502 3811 466269091 466268785 3.350000e-150 542.0
8 TraesCS1B01G199300 chr7A 98.387 310 2 3 3502 3811 81947232 81947538 3.350000e-150 542.0
9 TraesCS1B01G199300 chr7A 93.814 97 6 0 3386 3482 303970263 303970167 3.070000e-31 147.0
10 TraesCS1B01G199300 chr6A 98.387 310 2 3 3502 3811 144254989 144254683 3.350000e-150 542.0
11 TraesCS1B01G199300 chr6A 86.458 96 13 0 3387 3482 600113827 600113732 5.210000e-19 106.0
12 TraesCS1B01G199300 chr3B 98.387 310 2 3 3502 3811 821307100 821307406 3.350000e-150 542.0
13 TraesCS1B01G199300 chr3B 94.839 310 13 3 3502 3811 711050589 711050895 7.400000e-132 481.0
14 TraesCS1B01G199300 chr3B 92.632 95 7 0 3388 3482 4297498 4297592 1.850000e-28 137.0
15 TraesCS1B01G199300 chr3B 90.741 54 4 1 3435 3488 60410508 60410456 1.900000e-08 71.3
16 TraesCS1B01G199300 chr6B 98.065 310 3 3 3502 3811 523489238 523488932 1.560000e-148 536.0
17 TraesCS1B01G199300 chr6B 87.129 101 12 1 3382 3482 120135704 120135605 3.110000e-21 113.0
18 TraesCS1B01G199300 chr2B 95.161 310 12 3 3502 3811 45566621 45566315 1.590000e-133 486.0
19 TraesCS1B01G199300 chr2B 89.583 96 10 0 3384 3479 73382490 73382585 5.170000e-24 122.0
20 TraesCS1B01G199300 chr4B 94.516 310 14 3 3502 3811 63862591 63862285 3.440000e-130 475.0
21 TraesCS1B01G199300 chr4A 93.548 310 17 3 3502 3811 602141206 602141512 3.470000e-125 459.0
22 TraesCS1B01G199300 chr5D 91.837 98 6 2 3386 3482 486737706 486737802 6.640000e-28 135.0
23 TraesCS1B01G199300 chr3A 90.323 93 9 0 3390 3482 528557867 528557959 5.170000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G199300 chr1B 357424612 357428422 3810 False 7038 7038 100.0000 1 3811 1 chr1B.!!$F2 3810
1 TraesCS1B01G199300 chr1D 255491551 255495831 4280 True 2475 4730 92.4315 1 3390 2 chr1D.!!$R1 3389
2 TraesCS1B01G199300 chr1A 327529028 327532383 3355 True 2281 3555 93.1000 1 3390 2 chr1A.!!$R1 3389


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 1293 0.108186 TGGAGTGACGATCATGGCAC 60.108 55.0 0.0 0.0 0.00 5.01 F
1565 2540 0.321122 GCACAGCCTGTTGAGCTAGT 60.321 55.0 0.0 0.0 38.95 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2228 3224 0.320771 CTAGACCGTATGGCCATGGC 60.321 60.0 29.47 29.47 39.7 4.40 R
3472 4487 0.110823 CGCCTTGTCTTCGGTTTTCG 60.111 55.0 0.00 0.00 40.9 3.46 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 5.571784 ACACCTATGATGTTGCAGAATTG 57.428 39.130 0.00 0.00 0.00 2.32
122 134 2.571212 CAATTGCCGCTACCCTGATAA 58.429 47.619 0.00 0.00 0.00 1.75
190 1103 1.896220 TTTCAGCAGCTAACCACCAG 58.104 50.000 0.00 0.00 0.00 4.00
215 1128 1.225475 GCAACGACTCGAATGCACG 60.225 57.895 21.07 0.00 40.55 5.34
366 1290 3.129109 CTGAATGGAGTGACGATCATGG 58.871 50.000 0.00 0.00 0.00 3.66
367 1291 1.869767 GAATGGAGTGACGATCATGGC 59.130 52.381 0.00 0.00 0.00 4.40
368 1292 0.832626 ATGGAGTGACGATCATGGCA 59.167 50.000 0.00 0.00 0.00 4.92
369 1293 0.108186 TGGAGTGACGATCATGGCAC 60.108 55.000 0.00 0.00 0.00 5.01
560 1484 0.679321 CCTTTGCCTCCTCCTGCTTC 60.679 60.000 0.00 0.00 0.00 3.86
619 1543 4.436998 CTCGTCCTCCACCGCCAC 62.437 72.222 0.00 0.00 0.00 5.01
622 1546 4.083862 GTCCTCCACCGCCACCTC 62.084 72.222 0.00 0.00 0.00 3.85
625 1549 4.394712 CTCCACCGCCACCTCCAC 62.395 72.222 0.00 0.00 0.00 4.02
634 1558 3.706373 CACCTCCACCTCCACCGG 61.706 72.222 0.00 0.00 0.00 5.28
830 1763 1.164041 ACGACTGGGCAAACGGAAAG 61.164 55.000 0.00 0.00 0.00 2.62
915 1864 2.046217 GGGCCGAGGGTTGAAGTC 60.046 66.667 0.00 0.00 0.00 3.01
916 1865 2.046217 GGCCGAGGGTTGAAGTCC 60.046 66.667 0.00 0.00 0.00 3.85
1117 2066 1.858091 CGTGATCCATTTCCTCCTCG 58.142 55.000 0.00 0.00 0.00 4.63
1118 2067 1.587547 GTGATCCATTTCCTCCTCGC 58.412 55.000 0.00 0.00 0.00 5.03
1119 2068 1.139853 GTGATCCATTTCCTCCTCGCT 59.860 52.381 0.00 0.00 0.00 4.93
1120 2069 1.839994 TGATCCATTTCCTCCTCGCTT 59.160 47.619 0.00 0.00 0.00 4.68
1121 2070 2.158900 TGATCCATTTCCTCCTCGCTTC 60.159 50.000 0.00 0.00 0.00 3.86
1126 2075 1.645710 TTTCCTCCTCGCTTCCTTCT 58.354 50.000 0.00 0.00 0.00 2.85
1127 2076 1.187087 TTCCTCCTCGCTTCCTTCTC 58.813 55.000 0.00 0.00 0.00 2.87
1183 2136 4.760047 CCCCTCACCGGCGACTTG 62.760 72.222 9.30 2.14 0.00 3.16
1350 2315 1.341156 ATTCTTGGCCTCTCCCCTCG 61.341 60.000 3.32 0.00 0.00 4.63
1352 2317 3.984186 CTTGGCCTCTCCCCTCGGA 62.984 68.421 3.32 0.00 36.45 4.55
1396 2361 2.587194 CATGGCCGGCGAGAAGAG 60.587 66.667 22.54 1.52 0.00 2.85
1534 2509 0.679505 TGCGAGTTCTGTGGCTAGTT 59.320 50.000 0.00 0.00 0.00 2.24
1552 2527 0.383949 TTTTCTTGTTCCGGCACAGC 59.616 50.000 7.09 0.00 0.00 4.40
1562 2537 2.282040 GGCACAGCCTGTTGAGCT 60.282 61.111 0.00 0.00 46.69 4.09
1564 2539 1.023513 GGCACAGCCTGTTGAGCTAG 61.024 60.000 0.00 0.00 46.69 3.42
1565 2540 0.321122 GCACAGCCTGTTGAGCTAGT 60.321 55.000 0.00 0.00 38.95 2.57
1566 2541 1.719600 CACAGCCTGTTGAGCTAGTC 58.280 55.000 0.00 0.00 38.95 2.59
1637 2627 1.372087 CTGCTGGGCTCGTGGAATTC 61.372 60.000 0.00 0.00 0.00 2.17
1672 2662 3.080319 GAGCTTGCTCAAGTCAATTCCT 58.920 45.455 16.71 0.00 40.45 3.36
1697 2687 2.381725 TCAGATCTGTTCAGCTGCTG 57.618 50.000 23.31 23.31 0.00 4.41
1737 2727 5.934625 AGATGTTCTCTGACCAAACACATAC 59.065 40.000 0.00 0.00 35.87 2.39
1891 2881 0.377554 CGACTCGTACAAGATCCGCT 59.622 55.000 0.00 0.00 0.00 5.52
1895 2885 2.029290 ACTCGTACAAGATCCGCTTTGT 60.029 45.455 3.83 3.83 33.60 2.83
1898 2888 3.057386 TCGTACAAGATCCGCTTTGTGTA 60.057 43.478 8.01 0.00 33.60 2.90
1914 2904 3.897325 TGTGTATCGCGTATCAGGATTC 58.103 45.455 5.77 0.00 0.00 2.52
1967 2957 9.120538 GGTATTCCAGCAAAATCTTATCAACTA 57.879 33.333 0.00 0.00 0.00 2.24
1997 2987 6.018343 GCTCTTTCATAGGATCAAGTACAAGC 60.018 42.308 0.00 0.00 0.00 4.01
1998 2988 6.042777 TCTTTCATAGGATCAAGTACAAGCG 58.957 40.000 0.00 0.00 0.00 4.68
2000 2990 4.933330 TCATAGGATCAAGTACAAGCGTC 58.067 43.478 0.00 0.00 0.00 5.19
2036 3026 0.399454 AAGCTGCTTCCTCTTCTGCA 59.601 50.000 9.53 0.00 0.00 4.41
2073 3063 4.536090 ACTAGTCATGGTGGAAGGAAATGA 59.464 41.667 0.00 0.00 0.00 2.57
2189 3185 6.183360 GCCGATATGTTTGTTGGTACCATTTA 60.183 38.462 17.17 0.00 0.00 1.40
2225 3221 2.877097 ATGTTCCAGTGTGGCATGTA 57.123 45.000 0.00 0.00 37.47 2.29
2226 3222 2.877097 TGTTCCAGTGTGGCATGTAT 57.123 45.000 0.00 0.00 37.47 2.29
2227 3223 2.435422 TGTTCCAGTGTGGCATGTATG 58.565 47.619 0.00 0.00 37.47 2.39
2228 3224 1.745087 GTTCCAGTGTGGCATGTATGG 59.255 52.381 0.00 0.00 37.47 2.74
2324 3320 6.603201 CCAGCAGGAATTGAGAAATTTACCTA 59.397 38.462 0.00 0.00 36.89 3.08
2341 3337 8.851541 ATTTACCTAACGAAATTCCTGTTACA 57.148 30.769 0.00 0.00 0.00 2.41
2488 3495 9.123902 TGAGTCATTTTATAATTGTGGATGAGG 57.876 33.333 0.00 0.00 0.00 3.86
2515 3522 4.869861 AGTTCAAAAGTCTTGCGCAATTTT 59.130 33.333 25.26 22.85 0.00 1.82
2784 3791 0.320946 CTTGGGGCTTGCATTTGGTG 60.321 55.000 0.00 0.00 0.00 4.17
2865 3872 7.396540 AGCTTTCAAGTAATATGGTTTGAGG 57.603 36.000 0.00 0.00 31.85 3.86
2988 3995 3.406764 GCACTCTCAGTTCCAAACATCT 58.593 45.455 0.00 0.00 0.00 2.90
2999 4006 8.432013 TCAGTTCCAAACATCTATATGTATGCT 58.568 33.333 0.00 0.00 45.79 3.79
3093 4103 5.529060 GTCTACAATTGAGGATGATGGGAAC 59.471 44.000 13.59 0.00 0.00 3.62
3167 4178 2.989909 TGCAGTGATGTTCCCACATAG 58.010 47.619 0.00 0.00 44.22 2.23
3168 4179 2.305635 TGCAGTGATGTTCCCACATAGT 59.694 45.455 0.00 0.00 44.22 2.12
3169 4180 3.517500 TGCAGTGATGTTCCCACATAGTA 59.482 43.478 0.00 0.00 44.22 1.82
3190 4201 4.552166 AATTTGTCTGTCGGTTTCACTG 57.448 40.909 0.00 0.00 0.00 3.66
3198 4210 4.748102 TCTGTCGGTTTCACTGTATTTGAC 59.252 41.667 0.00 0.00 0.00 3.18
3233 4245 6.532657 GCAGTTATACACGCCTAAAAGAGTTA 59.467 38.462 0.00 0.00 0.00 2.24
3246 4258 7.362142 GCCTAAAAGAGTTAAGCAGCACTTATT 60.362 37.037 0.00 0.00 40.55 1.40
3262 4274 5.023920 CACTTATTAAGCATGCAAGTGACG 58.976 41.667 29.93 12.98 45.67 4.35
3342 4354 3.134804 AGAATCCCTTCCTGAATACACCG 59.865 47.826 0.00 0.00 31.27 4.94
3343 4355 1.200519 TCCCTTCCTGAATACACCGG 58.799 55.000 0.00 0.00 0.00 5.28
3349 4361 0.676466 CCTGAATACACCGGCTGCAA 60.676 55.000 0.00 0.00 0.00 4.08
3374 4389 4.377897 ACTGAACTAAACGTCTTTCAGGG 58.622 43.478 22.20 8.57 46.16 4.45
3386 4401 4.818546 CGTCTTTCAGGGCATTGAGATATT 59.181 41.667 0.00 0.00 0.00 1.28
3413 4428 6.976636 TTTTTGAAACGAAGGCAAAAGATT 57.023 29.167 0.00 0.00 41.02 2.40
3414 4429 6.976636 TTTTGAAACGAAGGCAAAAGATTT 57.023 29.167 0.00 0.00 36.80 2.17
3415 4430 5.964887 TTGAAACGAAGGCAAAAGATTTG 57.035 34.783 0.00 0.00 0.00 2.32
3416 4431 5.004922 TGAAACGAAGGCAAAAGATTTGT 57.995 34.783 4.90 0.00 0.00 2.83
3417 4432 5.040635 TGAAACGAAGGCAAAAGATTTGTC 58.959 37.500 0.00 0.00 0.00 3.18
3418 4433 4.918810 AACGAAGGCAAAAGATTTGTCT 57.081 36.364 4.21 4.21 35.63 3.41
3419 4434 4.489679 ACGAAGGCAAAAGATTTGTCTC 57.510 40.909 10.07 4.30 32.49 3.36
3420 4435 3.882888 ACGAAGGCAAAAGATTTGTCTCA 59.117 39.130 10.07 0.00 32.49 3.27
3421 4436 4.520492 ACGAAGGCAAAAGATTTGTCTCAT 59.480 37.500 10.07 0.00 32.49 2.90
3422 4437 5.091431 CGAAGGCAAAAGATTTGTCTCATC 58.909 41.667 10.07 5.08 32.49 2.92
3423 4438 5.335113 CGAAGGCAAAAGATTTGTCTCATCA 60.335 40.000 10.07 0.00 32.49 3.07
3424 4439 6.409524 AAGGCAAAAGATTTGTCTCATCAA 57.590 33.333 10.07 0.00 32.49 2.57
3425 4440 6.600882 AGGCAAAAGATTTGTCTCATCAAT 57.399 33.333 4.21 0.00 25.88 2.57
3426 4441 7.001099 AGGCAAAAGATTTGTCTCATCAATT 57.999 32.000 4.21 0.00 25.88 2.32
3427 4442 8.125978 AGGCAAAAGATTTGTCTCATCAATTA 57.874 30.769 4.21 0.00 25.88 1.40
3428 4443 8.587608 AGGCAAAAGATTTGTCTCATCAATTAA 58.412 29.630 4.21 0.00 25.88 1.40
3429 4444 9.374838 GGCAAAAGATTTGTCTCATCAATTAAT 57.625 29.630 4.90 0.00 0.00 1.40
3452 4467 8.753497 AATTAAAAAGAAGAGAGTTGTCCAGT 57.247 30.769 0.00 0.00 0.00 4.00
3453 4468 8.753497 ATTAAAAAGAAGAGAGTTGTCCAGTT 57.247 30.769 0.00 0.00 0.00 3.16
3454 4469 9.847224 ATTAAAAAGAAGAGAGTTGTCCAGTTA 57.153 29.630 0.00 0.00 0.00 2.24
3455 4470 9.675464 TTAAAAAGAAGAGAGTTGTCCAGTTAA 57.325 29.630 0.00 0.00 0.00 2.01
3456 4471 8.753497 AAAAAGAAGAGAGTTGTCCAGTTAAT 57.247 30.769 0.00 0.00 0.00 1.40
3457 4472 8.753497 AAAAGAAGAGAGTTGTCCAGTTAATT 57.247 30.769 0.00 0.00 0.00 1.40
3458 4473 9.847224 AAAAGAAGAGAGTTGTCCAGTTAATTA 57.153 29.630 0.00 0.00 0.00 1.40
3459 4474 9.847224 AAAGAAGAGAGTTGTCCAGTTAATTAA 57.153 29.630 0.00 0.00 0.00 1.40
3460 4475 8.834749 AGAAGAGAGTTGTCCAGTTAATTAAC 57.165 34.615 18.77 18.77 36.46 2.01
3461 4476 7.599245 AGAAGAGAGTTGTCCAGTTAATTAACG 59.401 37.037 19.92 15.03 40.96 3.18
3462 4477 6.164176 AGAGAGTTGTCCAGTTAATTAACGG 58.836 40.000 22.56 22.56 40.96 4.44
3463 4478 6.014840 AGAGAGTTGTCCAGTTAATTAACGGA 60.015 38.462 24.48 24.81 40.96 4.69
3464 4479 6.527423 AGAGTTGTCCAGTTAATTAACGGAA 58.473 36.000 27.96 20.12 39.07 4.30
3465 4480 6.993902 AGAGTTGTCCAGTTAATTAACGGAAA 59.006 34.615 27.96 23.85 39.07 3.13
3466 4481 7.499895 AGAGTTGTCCAGTTAATTAACGGAAAA 59.500 33.333 27.96 26.48 39.07 2.29
3467 4482 8.173542 AGTTGTCCAGTTAATTAACGGAAAAT 57.826 30.769 28.15 22.52 37.85 1.82
3468 4483 8.294577 AGTTGTCCAGTTAATTAACGGAAAATC 58.705 33.333 28.15 23.55 37.85 2.17
3469 4484 6.833839 TGTCCAGTTAATTAACGGAAAATCG 58.166 36.000 27.96 14.40 39.07 3.34
3470 4485 6.128227 TGTCCAGTTAATTAACGGAAAATCGG 60.128 38.462 27.96 17.48 39.07 4.18
3471 4486 5.354792 TCCAGTTAATTAACGGAAAATCGGG 59.645 40.000 25.93 16.25 40.96 5.14
3472 4487 5.032220 CAGTTAATTAACGGAAAATCGGGC 58.968 41.667 19.91 0.00 40.96 6.13
3473 4488 2.836479 AATTAACGGAAAATCGGGCG 57.164 45.000 0.00 0.00 0.00 6.13
3474 4489 2.027003 ATTAACGGAAAATCGGGCGA 57.973 45.000 0.00 0.00 0.00 5.54
3475 4490 1.805869 TTAACGGAAAATCGGGCGAA 58.194 45.000 0.00 0.00 0.00 4.70
3476 4491 1.805869 TAACGGAAAATCGGGCGAAA 58.194 45.000 0.00 0.00 0.00 3.46
3477 4492 0.953003 AACGGAAAATCGGGCGAAAA 59.047 45.000 0.00 0.00 0.00 2.29
3478 4493 0.239082 ACGGAAAATCGGGCGAAAAC 59.761 50.000 0.00 0.00 0.00 2.43
3479 4494 0.455464 CGGAAAATCGGGCGAAAACC 60.455 55.000 0.00 0.00 0.00 3.27
3486 4501 4.052519 GGGCGAAAACCGAAGACA 57.947 55.556 0.00 0.00 41.76 3.41
3487 4502 2.323213 GGGCGAAAACCGAAGACAA 58.677 52.632 0.00 0.00 41.76 3.18
3488 4503 0.237498 GGGCGAAAACCGAAGACAAG 59.763 55.000 0.00 0.00 41.76 3.16
3489 4504 0.237498 GGCGAAAACCGAAGACAAGG 59.763 55.000 0.00 0.00 41.76 3.61
3490 4505 0.385598 GCGAAAACCGAAGACAAGGC 60.386 55.000 0.00 0.00 41.76 4.35
3491 4506 0.110823 CGAAAACCGAAGACAAGGCG 60.111 55.000 0.00 0.00 41.76 5.52
3497 4512 4.388499 GAAGACAAGGCGGCCGGA 62.388 66.667 29.38 0.00 0.00 5.14
3498 4513 3.894547 GAAGACAAGGCGGCCGGAA 62.895 63.158 29.38 0.00 0.00 4.30
3499 4514 3.485346 AAGACAAGGCGGCCGGAAA 62.485 57.895 29.38 0.00 0.00 3.13
3500 4515 2.969300 AAGACAAGGCGGCCGGAAAA 62.969 55.000 29.38 0.00 0.00 2.29
3501 4516 2.519780 ACAAGGCGGCCGGAAAAA 60.520 55.556 29.38 0.00 0.00 1.94
3518 4533 3.385193 AAAAAGCGGGTGGATTTTCAG 57.615 42.857 0.00 0.00 43.01 3.02
3519 4534 1.995376 AAAGCGGGTGGATTTTCAGT 58.005 45.000 0.00 0.00 27.59 3.41
3520 4535 1.534729 AAGCGGGTGGATTTTCAGTC 58.465 50.000 0.00 0.00 0.00 3.51
3521 4536 0.400213 AGCGGGTGGATTTTCAGTCA 59.600 50.000 0.00 0.00 0.00 3.41
3522 4537 0.521735 GCGGGTGGATTTTCAGTCAC 59.478 55.000 0.00 0.00 0.00 3.67
3523 4538 1.890876 CGGGTGGATTTTCAGTCACA 58.109 50.000 0.00 0.00 32.29 3.58
3524 4539 1.535462 CGGGTGGATTTTCAGTCACAC 59.465 52.381 0.00 0.00 32.29 3.82
3525 4540 1.886542 GGGTGGATTTTCAGTCACACC 59.113 52.381 0.00 0.00 45.70 4.16
3526 4541 1.535462 GGTGGATTTTCAGTCACACCG 59.465 52.381 0.00 0.00 38.96 4.94
3527 4542 1.069227 GTGGATTTTCAGTCACACCGC 60.069 52.381 0.00 0.00 0.00 5.68
3528 4543 1.202758 TGGATTTTCAGTCACACCGCT 60.203 47.619 0.00 0.00 0.00 5.52
3529 4544 1.464997 GGATTTTCAGTCACACCGCTC 59.535 52.381 0.00 0.00 0.00 5.03
3530 4545 2.143122 GATTTTCAGTCACACCGCTCA 58.857 47.619 0.00 0.00 0.00 4.26
3531 4546 2.254546 TTTTCAGTCACACCGCTCAT 57.745 45.000 0.00 0.00 0.00 2.90
3532 4547 1.795768 TTTCAGTCACACCGCTCATC 58.204 50.000 0.00 0.00 0.00 2.92
3533 4548 0.388520 TTCAGTCACACCGCTCATCG 60.389 55.000 0.00 0.00 38.08 3.84
3534 4549 1.080501 CAGTCACACCGCTCATCGT 60.081 57.895 0.00 0.00 36.19 3.73
3535 4550 1.080501 AGTCACACCGCTCATCGTG 60.081 57.895 0.00 0.00 36.19 4.35
3536 4551 2.432456 TCACACCGCTCATCGTGC 60.432 61.111 0.00 0.00 36.19 5.34
3537 4552 3.490759 CACACCGCTCATCGTGCC 61.491 66.667 0.00 0.00 36.19 5.01
3538 4553 3.695606 ACACCGCTCATCGTGCCT 61.696 61.111 0.00 0.00 36.19 4.75
3539 4554 2.348104 ACACCGCTCATCGTGCCTA 61.348 57.895 0.00 0.00 36.19 3.93
3540 4555 1.153647 CACCGCTCATCGTGCCTAA 60.154 57.895 0.00 0.00 36.19 2.69
3541 4556 0.739462 CACCGCTCATCGTGCCTAAA 60.739 55.000 0.00 0.00 36.19 1.85
3542 4557 0.460284 ACCGCTCATCGTGCCTAAAG 60.460 55.000 0.00 0.00 36.19 1.85
3543 4558 1.154205 CCGCTCATCGTGCCTAAAGG 61.154 60.000 0.00 0.00 36.19 3.11
3558 4573 5.606348 CCTAAAGGCACTCTTCATAGTCT 57.394 43.478 0.00 0.00 38.49 3.24
3559 4574 5.355596 CCTAAAGGCACTCTTCATAGTCTG 58.644 45.833 0.00 0.00 38.49 3.51
3560 4575 5.127845 CCTAAAGGCACTCTTCATAGTCTGA 59.872 44.000 0.00 0.00 38.49 3.27
3561 4576 4.464069 AAGGCACTCTTCATAGTCTGAC 57.536 45.455 0.00 0.00 38.49 3.51
3562 4577 2.763448 AGGCACTCTTCATAGTCTGACC 59.237 50.000 3.76 0.00 32.17 4.02
3563 4578 2.497675 GGCACTCTTCATAGTCTGACCA 59.502 50.000 3.76 0.00 32.17 4.02
3564 4579 3.055819 GGCACTCTTCATAGTCTGACCAA 60.056 47.826 3.76 0.00 32.17 3.67
3565 4580 4.180057 GCACTCTTCATAGTCTGACCAAG 58.820 47.826 3.76 2.58 32.17 3.61
3566 4581 4.180057 CACTCTTCATAGTCTGACCAAGC 58.820 47.826 3.76 0.00 32.17 4.01
3567 4582 4.081752 CACTCTTCATAGTCTGACCAAGCT 60.082 45.833 3.76 0.00 32.17 3.74
3568 4583 4.530161 ACTCTTCATAGTCTGACCAAGCTT 59.470 41.667 3.76 0.00 32.17 3.74
3569 4584 4.825422 TCTTCATAGTCTGACCAAGCTTG 58.175 43.478 19.93 19.93 32.17 4.01
3570 4585 4.528206 TCTTCATAGTCTGACCAAGCTTGA 59.472 41.667 28.05 7.10 32.17 3.02
3571 4586 4.890158 TCATAGTCTGACCAAGCTTGAA 57.110 40.909 28.05 11.66 0.00 2.69
3572 4587 4.569943 TCATAGTCTGACCAAGCTTGAAC 58.430 43.478 28.05 19.48 0.00 3.18
3573 4588 1.871080 AGTCTGACCAAGCTTGAACG 58.129 50.000 28.05 13.52 0.00 3.95
3574 4589 0.868406 GTCTGACCAAGCTTGAACGG 59.132 55.000 28.05 22.45 0.00 4.44
3575 4590 0.250295 TCTGACCAAGCTTGAACGGG 60.250 55.000 28.05 13.07 0.00 5.28
3576 4591 1.856265 CTGACCAAGCTTGAACGGGC 61.856 60.000 28.05 13.84 0.00 6.13
3577 4592 1.600916 GACCAAGCTTGAACGGGCT 60.601 57.895 28.05 1.62 40.85 5.19
3579 4594 0.755327 ACCAAGCTTGAACGGGCTTT 60.755 50.000 28.05 0.00 45.03 3.51
3580 4595 0.389025 CCAAGCTTGAACGGGCTTTT 59.611 50.000 28.05 0.00 45.03 2.27
3581 4596 1.602920 CCAAGCTTGAACGGGCTTTTC 60.603 52.381 28.05 0.00 45.03 2.29
3582 4597 1.338020 CAAGCTTGAACGGGCTTTTCT 59.662 47.619 22.31 0.00 45.03 2.52
3583 4598 1.239347 AGCTTGAACGGGCTTTTCTC 58.761 50.000 0.00 0.00 34.96 2.87
3584 4599 1.202818 AGCTTGAACGGGCTTTTCTCT 60.203 47.619 0.00 0.00 34.96 3.10
3585 4600 1.068954 GCTTGAACGGGCTTTTCTCTG 60.069 52.381 0.00 0.00 0.00 3.35
3586 4601 1.537202 CTTGAACGGGCTTTTCTCTGG 59.463 52.381 0.00 0.00 0.00 3.86
3587 4602 0.472471 TGAACGGGCTTTTCTCTGGT 59.528 50.000 0.00 0.00 0.00 4.00
3588 4603 1.157585 GAACGGGCTTTTCTCTGGTC 58.842 55.000 0.00 0.00 0.00 4.02
3589 4604 0.472471 AACGGGCTTTTCTCTGGTCA 59.528 50.000 0.00 0.00 0.00 4.02
3590 4605 0.035458 ACGGGCTTTTCTCTGGTCAG 59.965 55.000 0.00 0.00 0.00 3.51
3591 4606 0.674895 CGGGCTTTTCTCTGGTCAGG 60.675 60.000 0.00 0.00 0.00 3.86
3592 4607 0.402121 GGGCTTTTCTCTGGTCAGGT 59.598 55.000 0.00 0.00 0.00 4.00
3593 4608 1.528129 GGCTTTTCTCTGGTCAGGTG 58.472 55.000 0.00 0.00 0.00 4.00
3594 4609 0.877743 GCTTTTCTCTGGTCAGGTGC 59.122 55.000 0.00 0.00 0.00 5.01
3595 4610 1.544314 GCTTTTCTCTGGTCAGGTGCT 60.544 52.381 0.00 0.00 0.00 4.40
3596 4611 2.149578 CTTTTCTCTGGTCAGGTGCTG 58.850 52.381 0.00 0.00 0.00 4.41
3597 4612 1.423584 TTTCTCTGGTCAGGTGCTGA 58.576 50.000 0.00 0.00 38.25 4.26
3607 4622 1.269723 TCAGGTGCTGACAAGACTACG 59.730 52.381 0.00 0.00 35.39 3.51
3608 4623 0.603569 AGGTGCTGACAAGACTACGG 59.396 55.000 0.00 0.00 0.00 4.02
3609 4624 0.389948 GGTGCTGACAAGACTACGGG 60.390 60.000 0.00 0.00 0.00 5.28
3610 4625 0.601558 GTGCTGACAAGACTACGGGA 59.398 55.000 0.00 0.00 0.00 5.14
3611 4626 0.888619 TGCTGACAAGACTACGGGAG 59.111 55.000 0.00 0.00 0.00 4.30
3612 4627 0.458716 GCTGACAAGACTACGGGAGC 60.459 60.000 0.00 0.00 0.00 4.70
3613 4628 0.173708 CTGACAAGACTACGGGAGCC 59.826 60.000 0.00 0.00 0.00 4.70
3614 4629 0.541063 TGACAAGACTACGGGAGCCA 60.541 55.000 0.00 0.00 0.00 4.75
3615 4630 0.606604 GACAAGACTACGGGAGCCAA 59.393 55.000 0.00 0.00 0.00 4.52
3616 4631 0.608640 ACAAGACTACGGGAGCCAAG 59.391 55.000 0.00 0.00 0.00 3.61
3617 4632 0.608640 CAAGACTACGGGAGCCAAGT 59.391 55.000 0.00 0.00 0.00 3.16
3618 4633 0.608640 AAGACTACGGGAGCCAAGTG 59.391 55.000 0.00 0.00 0.00 3.16
3619 4634 1.448013 GACTACGGGAGCCAAGTGC 60.448 63.158 0.00 0.00 41.71 4.40
3620 4635 2.167398 GACTACGGGAGCCAAGTGCA 62.167 60.000 0.00 0.00 44.83 4.57
3621 4636 1.003839 CTACGGGAGCCAAGTGCAA 60.004 57.895 0.00 0.00 44.83 4.08
3622 4637 0.605319 CTACGGGAGCCAAGTGCAAA 60.605 55.000 0.00 0.00 44.83 3.68
3623 4638 0.605319 TACGGGAGCCAAGTGCAAAG 60.605 55.000 0.00 0.00 44.83 2.77
3624 4639 1.898574 CGGGAGCCAAGTGCAAAGT 60.899 57.895 0.00 0.00 44.83 2.66
3625 4640 1.662044 GGGAGCCAAGTGCAAAGTG 59.338 57.895 0.00 0.00 44.83 3.16
3626 4641 0.823356 GGGAGCCAAGTGCAAAGTGA 60.823 55.000 0.00 0.00 44.83 3.41
3627 4642 1.032014 GGAGCCAAGTGCAAAGTGAA 58.968 50.000 0.00 0.00 44.83 3.18
3628 4643 1.408702 GGAGCCAAGTGCAAAGTGAAA 59.591 47.619 0.00 0.00 44.83 2.69
3629 4644 2.036346 GGAGCCAAGTGCAAAGTGAAAT 59.964 45.455 0.00 0.00 44.83 2.17
3630 4645 3.054878 GAGCCAAGTGCAAAGTGAAATG 58.945 45.455 0.00 0.00 44.83 2.32
3631 4646 2.137523 GCCAAGTGCAAAGTGAAATGG 58.862 47.619 0.00 0.00 40.77 3.16
3632 4647 2.758009 CCAAGTGCAAAGTGAAATGGG 58.242 47.619 0.00 0.00 0.00 4.00
3633 4648 2.364970 CCAAGTGCAAAGTGAAATGGGA 59.635 45.455 0.00 0.00 0.00 4.37
3634 4649 3.383761 CAAGTGCAAAGTGAAATGGGAC 58.616 45.455 0.00 0.00 0.00 4.46
3642 4657 6.695188 GCAAAGTGAAATGGGACACAGTTTG 61.695 44.000 16.70 16.70 46.63 2.93
3643 4658 8.998396 GCAAAGTGAAATGGGACACAGTTTGT 62.998 42.308 19.83 0.00 46.12 2.83
3644 4659 9.704849 GCAAAGTGAAATGGGACACAGTTTGTA 62.705 40.741 19.83 0.00 46.12 2.41
3647 4662 3.717842 TGGGACACAGTTTGTAGGC 57.282 52.632 0.00 0.00 39.17 3.93
3648 4663 0.109723 TGGGACACAGTTTGTAGGCC 59.890 55.000 0.00 0.00 39.17 5.19
3649 4664 0.608308 GGGACACAGTTTGTAGGCCC 60.608 60.000 0.00 6.76 38.76 5.80
3650 4665 0.109723 GGACACAGTTTGTAGGCCCA 59.890 55.000 0.00 0.00 39.17 5.36
3651 4666 1.477923 GGACACAGTTTGTAGGCCCAA 60.478 52.381 0.00 0.00 39.17 4.12
3652 4667 1.880027 GACACAGTTTGTAGGCCCAAG 59.120 52.381 0.00 0.00 39.17 3.61
3653 4668 1.247567 CACAGTTTGTAGGCCCAAGG 58.752 55.000 0.00 0.00 0.00 3.61
3654 4669 1.145571 ACAGTTTGTAGGCCCAAGGA 58.854 50.000 0.00 0.00 0.00 3.36
3655 4670 1.073923 ACAGTTTGTAGGCCCAAGGAG 59.926 52.381 0.00 0.00 0.00 3.69
3656 4671 1.073923 CAGTTTGTAGGCCCAAGGAGT 59.926 52.381 0.00 0.00 0.00 3.85
3657 4672 2.304761 CAGTTTGTAGGCCCAAGGAGTA 59.695 50.000 0.00 0.00 0.00 2.59
3658 4673 3.054361 CAGTTTGTAGGCCCAAGGAGTAT 60.054 47.826 0.00 0.00 0.00 2.12
3659 4674 3.054361 AGTTTGTAGGCCCAAGGAGTATG 60.054 47.826 0.00 0.00 0.00 2.39
3660 4675 1.507140 TGTAGGCCCAAGGAGTATGG 58.493 55.000 0.00 0.00 37.71 2.74
3661 4676 1.274184 TGTAGGCCCAAGGAGTATGGT 60.274 52.381 0.00 0.00 36.14 3.55
3662 4677 1.141053 GTAGGCCCAAGGAGTATGGTG 59.859 57.143 0.00 0.00 36.14 4.17
3663 4678 1.227383 GGCCCAAGGAGTATGGTGG 59.773 63.158 0.00 0.00 36.14 4.61
3664 4679 1.453928 GCCCAAGGAGTATGGTGGC 60.454 63.158 0.00 0.00 36.14 5.01
3665 4680 1.926426 GCCCAAGGAGTATGGTGGCT 61.926 60.000 0.00 0.00 36.14 4.75
3666 4681 0.625849 CCCAAGGAGTATGGTGGCTT 59.374 55.000 0.00 0.00 36.14 4.35
3667 4682 1.683011 CCCAAGGAGTATGGTGGCTTG 60.683 57.143 0.00 0.00 36.14 4.01
3668 4683 1.683011 CCAAGGAGTATGGTGGCTTGG 60.683 57.143 0.00 0.00 34.76 3.61
3669 4684 0.625849 AAGGAGTATGGTGGCTTGGG 59.374 55.000 0.00 0.00 0.00 4.12
3670 4685 1.227383 GGAGTATGGTGGCTTGGGG 59.773 63.158 0.00 0.00 0.00 4.96
3671 4686 1.227383 GAGTATGGTGGCTTGGGGG 59.773 63.158 0.00 0.00 0.00 5.40
3672 4687 1.543896 AGTATGGTGGCTTGGGGGT 60.544 57.895 0.00 0.00 0.00 4.95
3673 4688 1.379843 GTATGGTGGCTTGGGGGTG 60.380 63.158 0.00 0.00 0.00 4.61
3674 4689 3.295386 TATGGTGGCTTGGGGGTGC 62.295 63.158 0.00 0.00 0.00 5.01
3676 4691 4.621087 GGTGGCTTGGGGGTGCTT 62.621 66.667 0.00 0.00 0.00 3.91
3677 4692 2.438795 GTGGCTTGGGGGTGCTTA 59.561 61.111 0.00 0.00 0.00 3.09
3678 4693 1.228737 GTGGCTTGGGGGTGCTTAA 60.229 57.895 0.00 0.00 0.00 1.85
3679 4694 1.228737 TGGCTTGGGGGTGCTTAAC 60.229 57.895 0.00 0.00 0.00 2.01
3680 4695 1.076727 GGCTTGGGGGTGCTTAACT 59.923 57.895 0.00 0.00 0.00 2.24
3681 4696 0.965866 GGCTTGGGGGTGCTTAACTC 60.966 60.000 0.00 0.00 0.00 3.01
3682 4697 0.038310 GCTTGGGGGTGCTTAACTCT 59.962 55.000 0.00 0.00 0.00 3.24
3683 4698 1.826385 CTTGGGGGTGCTTAACTCTG 58.174 55.000 0.00 0.00 0.00 3.35
3684 4699 1.351017 CTTGGGGGTGCTTAACTCTGA 59.649 52.381 0.00 0.00 0.00 3.27
3685 4700 1.440618 TGGGGGTGCTTAACTCTGAA 58.559 50.000 0.00 0.00 0.00 3.02
3686 4701 1.777878 TGGGGGTGCTTAACTCTGAAA 59.222 47.619 0.00 0.00 0.00 2.69
3687 4702 2.175931 TGGGGGTGCTTAACTCTGAAAA 59.824 45.455 0.00 0.00 0.00 2.29
3688 4703 3.227614 GGGGGTGCTTAACTCTGAAAAA 58.772 45.455 0.00 0.00 0.00 1.94
3689 4704 3.832490 GGGGGTGCTTAACTCTGAAAAAT 59.168 43.478 0.00 0.00 0.00 1.82
3690 4705 4.283467 GGGGGTGCTTAACTCTGAAAAATT 59.717 41.667 0.00 0.00 0.00 1.82
3691 4706 5.221641 GGGGGTGCTTAACTCTGAAAAATTT 60.222 40.000 0.00 0.00 0.00 1.82
3692 4707 6.014925 GGGGGTGCTTAACTCTGAAAAATTTA 60.015 38.462 0.00 0.00 0.00 1.40
3693 4708 6.866770 GGGGTGCTTAACTCTGAAAAATTTAC 59.133 38.462 0.00 0.00 0.00 2.01
3694 4709 6.581166 GGGTGCTTAACTCTGAAAAATTTACG 59.419 38.462 0.00 0.00 0.00 3.18
3695 4710 6.087687 GGTGCTTAACTCTGAAAAATTTACGC 59.912 38.462 0.00 0.00 0.00 4.42
3696 4711 5.849081 TGCTTAACTCTGAAAAATTTACGCG 59.151 36.000 3.53 3.53 0.00 6.01
3697 4712 5.849604 GCTTAACTCTGAAAAATTTACGCGT 59.150 36.000 19.17 19.17 0.00 6.01
3698 4713 6.183359 GCTTAACTCTGAAAAATTTACGCGTG 60.183 38.462 24.59 1.92 0.00 5.34
3699 4714 3.551551 ACTCTGAAAAATTTACGCGTGC 58.448 40.909 24.59 1.31 0.00 5.34
3700 4715 2.908626 CTCTGAAAAATTTACGCGTGCC 59.091 45.455 24.59 2.22 0.00 5.01
3701 4716 1.982913 CTGAAAAATTTACGCGTGCCC 59.017 47.619 24.59 2.78 0.00 5.36
3702 4717 1.609555 TGAAAAATTTACGCGTGCCCT 59.390 42.857 24.59 0.24 0.00 5.19
3703 4718 2.034812 TGAAAAATTTACGCGTGCCCTT 59.965 40.909 24.59 7.34 0.00 3.95
3704 4719 2.341318 AAAATTTACGCGTGCCCTTC 57.659 45.000 24.59 0.00 0.00 3.46
3705 4720 0.167251 AAATTTACGCGTGCCCTTCG 59.833 50.000 24.59 0.00 0.00 3.79
3711 4726 3.195698 GCGTGCCCTTCGCCTTAG 61.196 66.667 0.00 0.00 46.61 2.18
3712 4727 2.511600 CGTGCCCTTCGCCTTAGG 60.512 66.667 0.00 0.00 36.24 2.69
3713 4728 2.669240 GTGCCCTTCGCCTTAGGT 59.331 61.111 0.00 0.00 36.24 3.08
3714 4729 1.745489 GTGCCCTTCGCCTTAGGTG 60.745 63.158 5.29 5.29 36.24 4.00
3715 4730 2.124695 GCCCTTCGCCTTAGGTGG 60.125 66.667 12.28 3.66 33.43 4.61
3722 4737 2.763902 GCCTTAGGTGGCCTTGGT 59.236 61.111 3.32 0.00 46.82 3.67
3723 4738 1.076727 GCCTTAGGTGGCCTTGGTT 59.923 57.895 3.32 0.00 46.82 3.67
3724 4739 0.965866 GCCTTAGGTGGCCTTGGTTC 60.966 60.000 3.32 0.00 46.82 3.62
3725 4740 0.676782 CCTTAGGTGGCCTTGGTTCG 60.677 60.000 3.32 0.00 34.61 3.95
3726 4741 0.323629 CTTAGGTGGCCTTGGTTCGA 59.676 55.000 3.32 0.00 34.61 3.71
3727 4742 0.766131 TTAGGTGGCCTTGGTTCGAA 59.234 50.000 3.32 0.00 34.61 3.71
3728 4743 0.988832 TAGGTGGCCTTGGTTCGAAT 59.011 50.000 3.32 0.00 34.61 3.34
3729 4744 0.609131 AGGTGGCCTTGGTTCGAATG 60.609 55.000 3.32 0.00 0.00 2.67
3730 4745 1.595093 GGTGGCCTTGGTTCGAATGG 61.595 60.000 3.32 3.18 0.00 3.16
3731 4746 0.608035 GTGGCCTTGGTTCGAATGGA 60.608 55.000 3.32 0.00 0.00 3.41
3732 4747 0.111446 TGGCCTTGGTTCGAATGGAA 59.889 50.000 3.32 0.00 0.00 3.53
3733 4748 0.811281 GGCCTTGGTTCGAATGGAAG 59.189 55.000 0.00 4.08 34.69 3.46
3734 4749 0.811281 GCCTTGGTTCGAATGGAAGG 59.189 55.000 20.44 20.44 34.69 3.46
3735 4750 1.613255 GCCTTGGTTCGAATGGAAGGA 60.613 52.381 25.46 2.10 36.09 3.36
3736 4751 2.359900 CCTTGGTTCGAATGGAAGGAG 58.640 52.381 20.24 6.04 36.09 3.69
3737 4752 1.740025 CTTGGTTCGAATGGAAGGAGC 59.260 52.381 0.00 0.00 34.69 4.70
3738 4753 0.035439 TGGTTCGAATGGAAGGAGCC 60.035 55.000 0.00 0.00 34.69 4.70
3739 4754 0.748367 GGTTCGAATGGAAGGAGCCC 60.748 60.000 0.00 0.00 34.69 5.19
3740 4755 0.748367 GTTCGAATGGAAGGAGCCCC 60.748 60.000 0.00 0.00 34.69 5.80
3741 4756 1.204786 TTCGAATGGAAGGAGCCCCA 61.205 55.000 0.00 0.00 36.79 4.96
3742 4757 1.452108 CGAATGGAAGGAGCCCCAC 60.452 63.158 0.00 0.00 34.92 4.61
3743 4758 1.691219 GAATGGAAGGAGCCCCACA 59.309 57.895 0.00 0.00 34.92 4.17
3744 4759 0.394899 GAATGGAAGGAGCCCCACAG 60.395 60.000 0.00 0.00 34.92 3.66
3745 4760 0.846427 AATGGAAGGAGCCCCACAGA 60.846 55.000 0.00 0.00 34.92 3.41
3746 4761 1.566298 ATGGAAGGAGCCCCACAGAC 61.566 60.000 0.00 0.00 34.92 3.51
3747 4762 1.920835 GGAAGGAGCCCCACAGACT 60.921 63.158 0.00 0.00 33.88 3.24
3748 4763 1.298014 GAAGGAGCCCCACAGACTG 59.702 63.158 0.00 0.00 33.88 3.51
3749 4764 1.462238 AAGGAGCCCCACAGACTGT 60.462 57.895 1.07 1.07 33.88 3.55
3758 4773 3.494850 CACAGACTGTGGGTTGGTT 57.505 52.632 25.22 0.00 44.27 3.67
3759 4774 2.631160 CACAGACTGTGGGTTGGTTA 57.369 50.000 25.22 0.00 44.27 2.85
3760 4775 3.140325 CACAGACTGTGGGTTGGTTAT 57.860 47.619 25.22 0.00 44.27 1.89
3761 4776 2.813754 CACAGACTGTGGGTTGGTTATG 59.186 50.000 25.22 0.00 44.27 1.90
3762 4777 2.224769 ACAGACTGTGGGTTGGTTATGG 60.225 50.000 7.47 0.00 0.00 2.74
3763 4778 1.173913 GACTGTGGGTTGGTTATGGC 58.826 55.000 0.00 0.00 0.00 4.40
3764 4779 0.480690 ACTGTGGGTTGGTTATGGCA 59.519 50.000 0.00 0.00 0.00 4.92
3765 4780 1.133325 ACTGTGGGTTGGTTATGGCAA 60.133 47.619 0.00 0.00 0.00 4.52
3766 4781 1.272212 CTGTGGGTTGGTTATGGCAAC 59.728 52.381 0.00 0.00 0.00 4.17
3767 4782 0.606096 GTGGGTTGGTTATGGCAACC 59.394 55.000 0.00 0.00 45.49 3.77
3769 4784 2.282827 GGTTGGTTATGGCAACCCC 58.717 57.895 5.92 0.00 41.69 4.95
3770 4785 0.252057 GGTTGGTTATGGCAACCCCT 60.252 55.000 5.92 0.00 41.69 4.79
3771 4786 0.894835 GTTGGTTATGGCAACCCCTG 59.105 55.000 5.92 0.00 39.54 4.45
3772 4787 0.485099 TTGGTTATGGCAACCCCTGT 59.515 50.000 5.92 0.00 39.54 4.00
3773 4788 0.485099 TGGTTATGGCAACCCCTGTT 59.515 50.000 5.92 0.00 39.54 3.16
3774 4789 1.182667 GGTTATGGCAACCCCTGTTC 58.817 55.000 0.00 0.00 34.26 3.18
3775 4790 0.808755 GTTATGGCAACCCCTGTTCG 59.191 55.000 0.00 0.00 30.42 3.95
3776 4791 0.322997 TTATGGCAACCCCTGTTCGG 60.323 55.000 0.00 0.00 30.42 4.30
3777 4792 1.202099 TATGGCAACCCCTGTTCGGA 61.202 55.000 0.00 0.00 30.42 4.55
3778 4793 2.359975 GGCAACCCCTGTTCGGAG 60.360 66.667 0.00 0.00 30.42 4.63
3779 4794 2.359975 GCAACCCCTGTTCGGAGG 60.360 66.667 0.00 0.00 30.42 4.30
3780 4795 2.890766 GCAACCCCTGTTCGGAGGA 61.891 63.158 0.00 0.00 34.69 3.71
3781 4796 1.991230 CAACCCCTGTTCGGAGGAT 59.009 57.895 0.00 0.00 34.69 3.24
3782 4797 0.392998 CAACCCCTGTTCGGAGGATG 60.393 60.000 0.00 0.00 34.69 3.51
3783 4798 0.546747 AACCCCTGTTCGGAGGATGA 60.547 55.000 0.00 0.00 34.69 2.92
3784 4799 0.326618 ACCCCTGTTCGGAGGATGAT 60.327 55.000 0.00 0.00 34.69 2.45
3785 4800 0.394565 CCCCTGTTCGGAGGATGATC 59.605 60.000 0.00 0.00 34.69 2.92
3786 4801 1.418334 CCCTGTTCGGAGGATGATCT 58.582 55.000 0.00 0.00 34.69 2.75
3787 4802 1.342819 CCCTGTTCGGAGGATGATCTC 59.657 57.143 0.00 0.00 34.69 2.75
3788 4803 2.034878 CCTGTTCGGAGGATGATCTCA 58.965 52.381 0.00 0.00 34.69 3.27
3789 4804 2.035704 CCTGTTCGGAGGATGATCTCAG 59.964 54.545 0.00 0.00 34.69 3.35
3790 4805 1.410517 TGTTCGGAGGATGATCTCAGC 59.589 52.381 0.00 0.00 35.58 4.26
3791 4806 1.686052 GTTCGGAGGATGATCTCAGCT 59.314 52.381 0.00 0.00 35.58 4.24
3792 4807 2.079170 TCGGAGGATGATCTCAGCTT 57.921 50.000 0.00 0.00 35.58 3.74
3793 4808 1.959985 TCGGAGGATGATCTCAGCTTC 59.040 52.381 0.00 0.00 37.59 3.86
3794 4809 1.962807 CGGAGGATGATCTCAGCTTCT 59.037 52.381 7.38 0.00 38.26 2.85
3795 4810 2.364970 CGGAGGATGATCTCAGCTTCTT 59.635 50.000 7.38 0.00 38.26 2.52
3796 4811 3.181467 CGGAGGATGATCTCAGCTTCTTT 60.181 47.826 7.38 0.00 38.26 2.52
3797 4812 4.682859 CGGAGGATGATCTCAGCTTCTTTT 60.683 45.833 7.38 0.00 38.26 2.27
3798 4813 5.452496 CGGAGGATGATCTCAGCTTCTTTTA 60.452 44.000 7.38 0.00 38.26 1.52
3799 4814 6.532826 GGAGGATGATCTCAGCTTCTTTTAT 58.467 40.000 7.38 0.00 38.26 1.40
3800 4815 6.427547 GGAGGATGATCTCAGCTTCTTTTATG 59.572 42.308 7.38 0.00 38.26 1.90
3801 4816 5.764192 AGGATGATCTCAGCTTCTTTTATGC 59.236 40.000 0.00 0.00 31.98 3.14
3802 4817 5.048852 GGATGATCTCAGCTTCTTTTATGCC 60.049 44.000 0.00 0.00 31.98 4.40
3803 4818 5.108187 TGATCTCAGCTTCTTTTATGCCT 57.892 39.130 0.00 0.00 0.00 4.75
3804 4819 5.121811 TGATCTCAGCTTCTTTTATGCCTC 58.878 41.667 0.00 0.00 0.00 4.70
3805 4820 3.878778 TCTCAGCTTCTTTTATGCCTCC 58.121 45.455 0.00 0.00 0.00 4.30
3806 4821 3.264193 TCTCAGCTTCTTTTATGCCTCCA 59.736 43.478 0.00 0.00 0.00 3.86
3807 4822 3.347216 TCAGCTTCTTTTATGCCTCCAC 58.653 45.455 0.00 0.00 0.00 4.02
3808 4823 2.424956 CAGCTTCTTTTATGCCTCCACC 59.575 50.000 0.00 0.00 0.00 4.61
3809 4824 2.041620 AGCTTCTTTTATGCCTCCACCA 59.958 45.455 0.00 0.00 0.00 4.17
3810 4825 2.164422 GCTTCTTTTATGCCTCCACCAC 59.836 50.000 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 4.654015 CAATTGGCATGCAATTTTACTGC 58.346 39.130 21.36 0.00 40.35 4.40
86 87 4.654015 GCAATTGGCATGCAATTTTACTG 58.346 39.130 21.36 12.05 43.29 2.74
87 88 4.950434 GCAATTGGCATGCAATTTTACT 57.050 36.364 21.36 0.00 43.29 2.24
122 134 7.063544 GCTATTCTAGTGTCATTTCGTGTTTCT 59.936 37.037 0.00 0.00 0.00 2.52
190 1103 3.218398 CATTCGAGTCGTTGCTTTGTTC 58.782 45.455 13.12 0.00 0.00 3.18
215 1128 2.490903 GCCCATGCCATCTATGTGAATC 59.509 50.000 0.00 0.00 0.00 2.52
615 1539 4.035102 GGTGGAGGTGGAGGTGGC 62.035 72.222 0.00 0.00 0.00 5.01
616 1540 3.706373 CGGTGGAGGTGGAGGTGG 61.706 72.222 0.00 0.00 0.00 4.61
617 1541 3.706373 CCGGTGGAGGTGGAGGTG 61.706 72.222 0.00 0.00 0.00 4.00
697 1621 2.615227 ATCGGTTCCTGCCATGGAGC 62.615 60.000 18.40 2.26 37.43 4.70
830 1763 4.344474 CTCGGCGATCGCTACCCC 62.344 72.222 36.25 20.07 41.60 4.95
963 1912 2.749839 CCAAATTGCCCCTCGCGA 60.750 61.111 9.26 9.26 42.08 5.87
1084 2033 3.726517 CACGCGCTTTGGACAGGG 61.727 66.667 5.73 0.00 0.00 4.45
1117 2066 1.404035 GAGACCGAGAGAGAAGGAAGC 59.596 57.143 0.00 0.00 0.00 3.86
1118 2067 1.668751 CGAGACCGAGAGAGAAGGAAG 59.331 57.143 0.00 0.00 38.22 3.46
1119 2068 1.679336 CCGAGACCGAGAGAGAAGGAA 60.679 57.143 0.00 0.00 38.22 3.36
1120 2069 0.107606 CCGAGACCGAGAGAGAAGGA 60.108 60.000 0.00 0.00 38.22 3.36
1121 2070 0.393267 ACCGAGACCGAGAGAGAAGG 60.393 60.000 0.00 0.00 38.22 3.46
1126 2075 3.125573 CGCACCGAGACCGAGAGA 61.126 66.667 0.00 0.00 38.22 3.10
1127 2076 3.432588 ACGCACCGAGACCGAGAG 61.433 66.667 0.00 0.00 38.22 3.20
1197 2150 4.270153 TCACCTGGGGCTGGGAGT 62.270 66.667 0.00 0.00 0.00 3.85
1396 2361 0.528684 CTCCTCGAAGCCGAACATCC 60.529 60.000 0.00 0.00 45.04 3.51
1469 2434 2.436824 GAAGGAGTGGGGAAGCGC 60.437 66.667 0.00 0.00 0.00 5.92
1470 2435 2.125512 CGAAGGAGTGGGGAAGCG 60.126 66.667 0.00 0.00 0.00 4.68
1534 2509 1.452145 GGCTGTGCCGGAACAAGAAA 61.452 55.000 18.16 0.00 39.62 2.52
1564 2539 7.606456 AGCATCTAGAAGTACTATCTAGCTGAC 59.394 40.741 27.72 22.41 42.26 3.51
1565 2540 7.685481 AGCATCTAGAAGTACTATCTAGCTGA 58.315 38.462 27.72 17.61 42.26 4.26
1566 2541 7.921786 AGCATCTAGAAGTACTATCTAGCTG 57.078 40.000 23.85 23.85 43.92 4.24
1576 2558 6.039941 TGAAGAAGCCTAGCATCTAGAAGTAC 59.960 42.308 0.00 0.00 35.50 2.73
1637 2627 3.681897 AGCAAGCTCAACAAGAATACTCG 59.318 43.478 0.00 0.00 0.00 4.18
1672 2662 2.842496 AGCTGAACAGATCTGATTGGGA 59.158 45.455 29.27 5.72 0.00 4.37
1697 2687 6.326375 AGAACATCTCTGTTGACGAAGTATC 58.674 40.000 0.00 0.00 44.04 2.24
1737 2727 5.757320 CACTTGCTATTTGTCCTCATAGGAG 59.243 44.000 0.00 0.00 46.90 3.69
1891 2881 3.786516 TCCTGATACGCGATACACAAA 57.213 42.857 15.93 0.00 0.00 2.83
1895 2885 2.888414 TGGAATCCTGATACGCGATACA 59.112 45.455 15.93 8.43 0.00 2.29
1898 2888 3.259374 AGAATGGAATCCTGATACGCGAT 59.741 43.478 15.93 0.96 0.00 4.58
1914 2904 1.081892 CAGCACCTCGTCAAGAATGG 58.918 55.000 0.00 0.00 0.00 3.16
1967 2957 5.424895 ACTTGATCCTATGAAAGAGCTGTCT 59.575 40.000 0.00 0.00 32.81 3.41
1998 2988 1.526575 TTGGTACACCGTCTCCCGAC 61.527 60.000 0.00 0.00 39.29 4.79
2000 2990 0.389426 CTTTGGTACACCGTCTCCCG 60.389 60.000 0.00 0.00 39.29 5.14
2008 2998 0.881796 GGAAGCAGCTTTGGTACACC 59.118 55.000 9.62 0.00 39.29 4.16
2012 3002 2.639839 AGAAGAGGAAGCAGCTTTGGTA 59.360 45.455 9.62 0.00 0.00 3.25
2014 3004 1.811359 CAGAAGAGGAAGCAGCTTTGG 59.189 52.381 9.62 0.00 0.00 3.28
2015 3005 1.199558 GCAGAAGAGGAAGCAGCTTTG 59.800 52.381 9.62 2.62 0.00 2.77
2036 3026 8.623903 CACCATGACTAGTTAATATGCACATTT 58.376 33.333 0.00 0.00 0.00 2.32
2073 3063 5.070446 TCGCCCTGATACATCTTAATTGACT 59.930 40.000 0.00 0.00 0.00 3.41
2149 3139 2.108514 CGGCCACACATACTGCAGG 61.109 63.158 19.93 2.38 0.00 4.85
2189 3185 4.379652 GAACATTCAAGGCCACACAATTT 58.620 39.130 5.01 0.00 0.00 1.82
2228 3224 0.320771 CTAGACCGTATGGCCATGGC 60.321 60.000 29.47 29.47 39.70 4.40
2229 3225 1.273606 CTCTAGACCGTATGGCCATGG 59.726 57.143 29.04 23.23 39.70 3.66
2230 3226 1.964223 ACTCTAGACCGTATGGCCATG 59.036 52.381 29.04 14.30 39.70 3.66
2324 3320 4.518970 AGCACATGTAACAGGAATTTCGTT 59.481 37.500 0.00 0.76 0.00 3.85
2488 3495 2.973879 GCGCAAGACTTTTGAACTTAGC 59.026 45.455 0.30 0.00 43.02 3.09
2784 3791 0.727398 GATTTGCTGTAGTGCCGGAC 59.273 55.000 5.05 0.00 0.00 4.79
3060 4070 4.115516 CCTCAATTGTAGACACTCCATCG 58.884 47.826 5.13 0.00 0.00 3.84
3167 4178 5.007332 ACAGTGAAACCGACAGACAAATTAC 59.993 40.000 0.00 0.00 37.80 1.89
3168 4179 5.120399 ACAGTGAAACCGACAGACAAATTA 58.880 37.500 0.00 0.00 37.80 1.40
3169 4180 3.945285 ACAGTGAAACCGACAGACAAATT 59.055 39.130 0.00 0.00 37.80 1.82
3198 4210 5.334105 GGCGTGTATAACTGCAAGAATATGG 60.334 44.000 0.00 0.00 37.43 2.74
3233 4245 3.444742 TGCATGCTTAATAAGTGCTGCTT 59.555 39.130 20.33 0.30 41.05 3.91
3246 4258 1.634757 CGCCGTCACTTGCATGCTTA 61.635 55.000 20.33 6.07 0.00 3.09
3342 4354 4.083484 ACGTTTAGTTCAGTTATTGCAGCC 60.083 41.667 0.00 0.00 0.00 4.85
3343 4355 5.030874 ACGTTTAGTTCAGTTATTGCAGC 57.969 39.130 0.00 0.00 0.00 5.25
3349 4361 6.649557 CCCTGAAAGACGTTTAGTTCAGTTAT 59.350 38.462 20.46 0.00 43.51 1.89
3390 4405 6.976636 AATCTTTTGCCTTCGTTTCAAAAA 57.023 29.167 0.00 0.00 38.65 1.94
3391 4406 6.370166 ACAAATCTTTTGCCTTCGTTTCAAAA 59.630 30.769 0.06 0.00 37.36 2.44
3392 4407 5.872070 ACAAATCTTTTGCCTTCGTTTCAAA 59.128 32.000 0.06 0.00 0.00 2.69
3393 4408 5.415221 ACAAATCTTTTGCCTTCGTTTCAA 58.585 33.333 0.06 0.00 0.00 2.69
3394 4409 5.004922 ACAAATCTTTTGCCTTCGTTTCA 57.995 34.783 0.06 0.00 0.00 2.69
3395 4410 5.281727 AGACAAATCTTTTGCCTTCGTTTC 58.718 37.500 0.06 0.00 0.00 2.78
3396 4411 5.163561 TGAGACAAATCTTTTGCCTTCGTTT 60.164 36.000 0.06 0.00 34.34 3.60
3397 4412 4.338118 TGAGACAAATCTTTTGCCTTCGTT 59.662 37.500 0.06 0.00 34.34 3.85
3398 4413 3.882888 TGAGACAAATCTTTTGCCTTCGT 59.117 39.130 0.06 0.00 34.34 3.85
3399 4414 4.488126 TGAGACAAATCTTTTGCCTTCG 57.512 40.909 0.06 0.00 34.34 3.79
3400 4415 6.017400 TGATGAGACAAATCTTTTGCCTTC 57.983 37.500 0.06 0.00 34.34 3.46
3401 4416 6.409524 TTGATGAGACAAATCTTTTGCCTT 57.590 33.333 0.06 0.00 34.34 4.35
3402 4417 6.600882 ATTGATGAGACAAATCTTTTGCCT 57.399 33.333 0.06 0.00 34.34 4.75
3403 4418 8.761575 TTAATTGATGAGACAAATCTTTTGCC 57.238 30.769 0.06 0.00 34.34 4.52
3426 4441 9.847224 ACTGGACAACTCTCTTCTTTTTAATTA 57.153 29.630 0.00 0.00 0.00 1.40
3427 4442 8.753497 ACTGGACAACTCTCTTCTTTTTAATT 57.247 30.769 0.00 0.00 0.00 1.40
3428 4443 8.753497 AACTGGACAACTCTCTTCTTTTTAAT 57.247 30.769 0.00 0.00 0.00 1.40
3429 4444 9.675464 TTAACTGGACAACTCTCTTCTTTTTAA 57.325 29.630 0.00 0.00 0.00 1.52
3430 4445 9.847224 ATTAACTGGACAACTCTCTTCTTTTTA 57.153 29.630 0.00 0.00 0.00 1.52
3431 4446 8.753497 ATTAACTGGACAACTCTCTTCTTTTT 57.247 30.769 0.00 0.00 0.00 1.94
3432 4447 8.753497 AATTAACTGGACAACTCTCTTCTTTT 57.247 30.769 0.00 0.00 0.00 2.27
3433 4448 9.847224 TTAATTAACTGGACAACTCTCTTCTTT 57.153 29.630 0.00 0.00 0.00 2.52
3434 4449 9.274206 GTTAATTAACTGGACAACTCTCTTCTT 57.726 33.333 19.07 0.00 33.52 2.52
3435 4450 7.599245 CGTTAATTAACTGGACAACTCTCTTCT 59.401 37.037 22.57 0.00 34.12 2.85
3436 4451 7.148623 CCGTTAATTAACTGGACAACTCTCTTC 60.149 40.741 23.47 0.00 34.24 2.87
3437 4452 6.649557 CCGTTAATTAACTGGACAACTCTCTT 59.350 38.462 23.47 0.00 34.24 2.85
3438 4453 6.014840 TCCGTTAATTAACTGGACAACTCTCT 60.015 38.462 25.08 0.00 35.53 3.10
3439 4454 6.161381 TCCGTTAATTAACTGGACAACTCTC 58.839 40.000 25.08 2.22 35.53 3.20
3440 4455 6.105397 TCCGTTAATTAACTGGACAACTCT 57.895 37.500 25.08 0.00 35.53 3.24
3441 4456 6.790285 TTCCGTTAATTAACTGGACAACTC 57.210 37.500 27.03 4.12 38.02 3.01
3442 4457 7.571080 TTTTCCGTTAATTAACTGGACAACT 57.429 32.000 27.03 0.00 38.02 3.16
3443 4458 7.269724 CGATTTTCCGTTAATTAACTGGACAAC 59.730 37.037 27.03 21.13 38.02 3.32
3444 4459 7.299586 CGATTTTCCGTTAATTAACTGGACAA 58.700 34.615 27.03 26.18 38.02 3.18
3445 4460 6.128227 CCGATTTTCCGTTAATTAACTGGACA 60.128 38.462 27.03 21.99 38.02 4.02
3446 4461 6.253013 CCGATTTTCCGTTAATTAACTGGAC 58.747 40.000 27.03 19.34 38.02 4.02
3447 4462 5.354792 CCCGATTTTCCGTTAATTAACTGGA 59.645 40.000 25.08 25.08 37.22 3.86
3448 4463 5.575019 CCCGATTTTCCGTTAATTAACTGG 58.425 41.667 22.57 22.56 34.12 4.00
3449 4464 5.032220 GCCCGATTTTCCGTTAATTAACTG 58.968 41.667 22.57 17.46 34.12 3.16
3450 4465 4.201841 CGCCCGATTTTCCGTTAATTAACT 60.202 41.667 22.57 6.08 34.12 2.24
3451 4466 4.030366 CGCCCGATTTTCCGTTAATTAAC 58.970 43.478 16.87 16.87 0.00 2.01
3452 4467 3.937706 TCGCCCGATTTTCCGTTAATTAA 59.062 39.130 0.00 0.00 0.00 1.40
3453 4468 3.529533 TCGCCCGATTTTCCGTTAATTA 58.470 40.909 0.00 0.00 0.00 1.40
3454 4469 2.358015 TCGCCCGATTTTCCGTTAATT 58.642 42.857 0.00 0.00 0.00 1.40
3455 4470 2.027003 TCGCCCGATTTTCCGTTAAT 57.973 45.000 0.00 0.00 0.00 1.40
3456 4471 1.805869 TTCGCCCGATTTTCCGTTAA 58.194 45.000 0.00 0.00 0.00 2.01
3457 4472 1.805869 TTTCGCCCGATTTTCCGTTA 58.194 45.000 0.00 0.00 0.00 3.18
3458 4473 0.953003 TTTTCGCCCGATTTTCCGTT 59.047 45.000 0.00 0.00 0.00 4.44
3459 4474 0.239082 GTTTTCGCCCGATTTTCCGT 59.761 50.000 0.00 0.00 0.00 4.69
3460 4475 0.455464 GGTTTTCGCCCGATTTTCCG 60.455 55.000 0.00 0.00 0.00 4.30
3461 4476 3.411808 GGTTTTCGCCCGATTTTCC 57.588 52.632 0.00 0.00 0.00 3.13
3468 4483 1.500512 TTGTCTTCGGTTTTCGCCCG 61.501 55.000 0.00 0.00 46.83 6.13
3469 4484 0.237498 CTTGTCTTCGGTTTTCGCCC 59.763 55.000 0.00 0.00 39.05 6.13
3470 4485 0.237498 CCTTGTCTTCGGTTTTCGCC 59.763 55.000 0.00 0.00 39.05 5.54
3471 4486 0.385598 GCCTTGTCTTCGGTTTTCGC 60.386 55.000 0.00 0.00 39.05 4.70
3472 4487 0.110823 CGCCTTGTCTTCGGTTTTCG 60.111 55.000 0.00 0.00 40.90 3.46
3473 4488 0.237498 CCGCCTTGTCTTCGGTTTTC 59.763 55.000 0.00 0.00 38.47 2.29
3474 4489 1.792118 GCCGCCTTGTCTTCGGTTTT 61.792 55.000 1.83 0.00 44.58 2.43
3475 4490 2.258726 GCCGCCTTGTCTTCGGTTT 61.259 57.895 1.83 0.00 44.58 3.27
3476 4491 2.668550 GCCGCCTTGTCTTCGGTT 60.669 61.111 1.83 0.00 44.58 4.44
3477 4492 4.699522 GGCCGCCTTGTCTTCGGT 62.700 66.667 0.71 0.00 44.58 4.69
3480 4495 3.894547 TTCCGGCCGCCTTGTCTTC 62.895 63.158 22.85 0.00 0.00 2.87
3481 4496 2.969300 TTTTCCGGCCGCCTTGTCTT 62.969 55.000 22.85 0.00 0.00 3.01
3482 4497 2.969300 TTTTTCCGGCCGCCTTGTCT 62.969 55.000 22.85 0.00 0.00 3.41
3483 4498 2.557372 TTTTTCCGGCCGCCTTGTC 61.557 57.895 22.85 0.00 0.00 3.18
3484 4499 2.519780 TTTTTCCGGCCGCCTTGT 60.520 55.556 22.85 0.00 0.00 3.16
3498 4513 2.698274 ACTGAAAATCCACCCGCTTTTT 59.302 40.909 0.00 0.00 0.00 1.94
3499 4514 2.296190 GACTGAAAATCCACCCGCTTTT 59.704 45.455 0.00 0.00 0.00 2.27
3500 4515 1.886542 GACTGAAAATCCACCCGCTTT 59.113 47.619 0.00 0.00 0.00 3.51
3501 4516 1.202879 TGACTGAAAATCCACCCGCTT 60.203 47.619 0.00 0.00 0.00 4.68
3502 4517 0.400213 TGACTGAAAATCCACCCGCT 59.600 50.000 0.00 0.00 0.00 5.52
3503 4518 0.521735 GTGACTGAAAATCCACCCGC 59.478 55.000 0.00 0.00 0.00 6.13
3504 4519 1.535462 GTGTGACTGAAAATCCACCCG 59.465 52.381 0.00 0.00 0.00 5.28
3505 4520 1.886542 GGTGTGACTGAAAATCCACCC 59.113 52.381 0.00 0.00 37.07 4.61
3506 4521 1.535462 CGGTGTGACTGAAAATCCACC 59.465 52.381 0.00 0.00 39.13 4.61
3507 4522 1.069227 GCGGTGTGACTGAAAATCCAC 60.069 52.381 0.00 0.00 0.00 4.02
3508 4523 1.202758 AGCGGTGTGACTGAAAATCCA 60.203 47.619 0.00 0.00 0.00 3.41
3509 4524 1.464997 GAGCGGTGTGACTGAAAATCC 59.535 52.381 0.00 0.00 0.00 3.01
3510 4525 2.143122 TGAGCGGTGTGACTGAAAATC 58.857 47.619 0.00 0.00 0.00 2.17
3511 4526 2.254546 TGAGCGGTGTGACTGAAAAT 57.745 45.000 0.00 0.00 0.00 1.82
3512 4527 2.143122 GATGAGCGGTGTGACTGAAAA 58.857 47.619 0.00 0.00 0.00 2.29
3513 4528 1.795768 GATGAGCGGTGTGACTGAAA 58.204 50.000 0.00 0.00 0.00 2.69
3514 4529 0.388520 CGATGAGCGGTGTGACTGAA 60.389 55.000 0.00 0.00 36.03 3.02
3515 4530 1.212751 CGATGAGCGGTGTGACTGA 59.787 57.895 0.00 0.00 36.03 3.41
3516 4531 1.080501 ACGATGAGCGGTGTGACTG 60.081 57.895 0.00 0.00 46.49 3.51
3517 4532 1.080501 CACGATGAGCGGTGTGACT 60.081 57.895 0.00 0.00 46.49 3.41
3518 4533 2.730672 GCACGATGAGCGGTGTGAC 61.731 63.158 6.96 0.00 46.49 3.67
3519 4534 2.432456 GCACGATGAGCGGTGTGA 60.432 61.111 6.96 0.00 46.49 3.58
3520 4535 2.557059 TAGGCACGATGAGCGGTGTG 62.557 60.000 0.00 0.00 46.49 3.82
3521 4536 1.884075 TTAGGCACGATGAGCGGTGT 61.884 55.000 0.00 0.00 46.49 4.16
3522 4537 0.739462 TTTAGGCACGATGAGCGGTG 60.739 55.000 0.00 0.00 46.49 4.94
3523 4538 0.460284 CTTTAGGCACGATGAGCGGT 60.460 55.000 0.00 0.00 46.49 5.68
3524 4539 1.154205 CCTTTAGGCACGATGAGCGG 61.154 60.000 0.00 0.00 46.49 5.52
3536 4551 5.127845 TCAGACTATGAAGAGTGCCTTTAGG 59.872 44.000 0.00 0.00 34.02 2.69
3537 4552 6.039616 GTCAGACTATGAAGAGTGCCTTTAG 58.960 44.000 0.00 0.00 40.43 1.85
3538 4553 5.105310 GGTCAGACTATGAAGAGTGCCTTTA 60.105 44.000 0.00 0.00 40.43 1.85
3539 4554 4.323104 GGTCAGACTATGAAGAGTGCCTTT 60.323 45.833 0.00 0.00 40.43 3.11
3540 4555 3.196685 GGTCAGACTATGAAGAGTGCCTT 59.803 47.826 0.00 0.00 40.43 4.35
3541 4556 2.763448 GGTCAGACTATGAAGAGTGCCT 59.237 50.000 0.00 0.00 40.43 4.75
3542 4557 2.497675 TGGTCAGACTATGAAGAGTGCC 59.502 50.000 0.00 0.00 40.43 5.01
3543 4558 3.876274 TGGTCAGACTATGAAGAGTGC 57.124 47.619 0.00 0.00 40.43 4.40
3544 4559 4.081752 AGCTTGGTCAGACTATGAAGAGTG 60.082 45.833 0.00 0.00 40.43 3.51
3545 4560 4.093011 AGCTTGGTCAGACTATGAAGAGT 58.907 43.478 0.00 0.00 40.43 3.24
3546 4561 4.734398 AGCTTGGTCAGACTATGAAGAG 57.266 45.455 0.00 0.00 40.43 2.85
3547 4562 4.528206 TCAAGCTTGGTCAGACTATGAAGA 59.472 41.667 25.73 0.00 40.43 2.87
3548 4563 4.825422 TCAAGCTTGGTCAGACTATGAAG 58.175 43.478 25.73 0.00 40.43 3.02
3549 4564 4.890158 TCAAGCTTGGTCAGACTATGAA 57.110 40.909 25.73 0.00 40.43 2.57
3550 4565 4.569943 GTTCAAGCTTGGTCAGACTATGA 58.430 43.478 25.73 0.00 34.79 2.15
3551 4566 3.369147 CGTTCAAGCTTGGTCAGACTATG 59.631 47.826 25.73 0.00 0.00 2.23
3552 4567 3.589988 CGTTCAAGCTTGGTCAGACTAT 58.410 45.455 25.73 0.00 0.00 2.12
3553 4568 2.288825 CCGTTCAAGCTTGGTCAGACTA 60.289 50.000 25.73 1.09 0.00 2.59
3554 4569 1.541233 CCGTTCAAGCTTGGTCAGACT 60.541 52.381 25.73 0.00 0.00 3.24
3555 4570 0.868406 CCGTTCAAGCTTGGTCAGAC 59.132 55.000 25.73 14.82 0.00 3.51
3556 4571 0.250295 CCCGTTCAAGCTTGGTCAGA 60.250 55.000 25.73 3.47 0.00 3.27
3557 4572 1.856265 GCCCGTTCAAGCTTGGTCAG 61.856 60.000 25.73 14.28 0.00 3.51
3558 4573 1.896660 GCCCGTTCAAGCTTGGTCA 60.897 57.895 25.73 8.13 0.00 4.02
3559 4574 1.600916 AGCCCGTTCAAGCTTGGTC 60.601 57.895 25.73 16.97 35.22 4.02
3560 4575 2.515901 AGCCCGTTCAAGCTTGGT 59.484 55.556 25.73 2.16 35.22 3.67
3564 4579 1.202818 AGAGAAAAGCCCGTTCAAGCT 60.203 47.619 0.00 0.00 42.40 3.74
3565 4580 1.068954 CAGAGAAAAGCCCGTTCAAGC 60.069 52.381 0.00 0.00 0.00 4.01
3566 4581 1.537202 CCAGAGAAAAGCCCGTTCAAG 59.463 52.381 0.00 0.00 0.00 3.02
3567 4582 1.133915 ACCAGAGAAAAGCCCGTTCAA 60.134 47.619 0.00 0.00 0.00 2.69
3568 4583 0.472471 ACCAGAGAAAAGCCCGTTCA 59.528 50.000 0.00 0.00 0.00 3.18
3569 4584 1.157585 GACCAGAGAAAAGCCCGTTC 58.842 55.000 0.00 0.00 0.00 3.95
3570 4585 0.472471 TGACCAGAGAAAAGCCCGTT 59.528 50.000 0.00 0.00 0.00 4.44
3571 4586 0.035458 CTGACCAGAGAAAAGCCCGT 59.965 55.000 0.00 0.00 0.00 5.28
3572 4587 0.674895 CCTGACCAGAGAAAAGCCCG 60.675 60.000 0.00 0.00 0.00 6.13
3573 4588 0.402121 ACCTGACCAGAGAAAAGCCC 59.598 55.000 0.00 0.00 0.00 5.19
3574 4589 1.528129 CACCTGACCAGAGAAAAGCC 58.472 55.000 0.00 0.00 0.00 4.35
3575 4590 0.877743 GCACCTGACCAGAGAAAAGC 59.122 55.000 0.00 0.00 0.00 3.51
3576 4591 2.149578 CAGCACCTGACCAGAGAAAAG 58.850 52.381 0.00 0.00 32.44 2.27
3577 4592 1.768275 TCAGCACCTGACCAGAGAAAA 59.232 47.619 0.00 0.00 35.39 2.29
3578 4593 1.423584 TCAGCACCTGACCAGAGAAA 58.576 50.000 0.00 0.00 35.39 2.52
3579 4594 3.147826 TCAGCACCTGACCAGAGAA 57.852 52.632 0.00 0.00 35.39 2.87
3580 4595 4.952482 TCAGCACCTGACCAGAGA 57.048 55.556 0.00 0.00 35.39 3.10
3587 4602 1.269723 CGTAGTCTTGTCAGCACCTGA 59.730 52.381 0.00 0.00 38.25 3.86
3588 4603 1.670087 CCGTAGTCTTGTCAGCACCTG 60.670 57.143 0.00 0.00 0.00 4.00
3589 4604 0.603569 CCGTAGTCTTGTCAGCACCT 59.396 55.000 0.00 0.00 0.00 4.00
3590 4605 0.389948 CCCGTAGTCTTGTCAGCACC 60.390 60.000 0.00 0.00 0.00 5.01
3591 4606 0.601558 TCCCGTAGTCTTGTCAGCAC 59.398 55.000 0.00 0.00 0.00 4.40
3592 4607 0.888619 CTCCCGTAGTCTTGTCAGCA 59.111 55.000 0.00 0.00 0.00 4.41
3593 4608 0.458716 GCTCCCGTAGTCTTGTCAGC 60.459 60.000 0.00 0.00 0.00 4.26
3594 4609 0.173708 GGCTCCCGTAGTCTTGTCAG 59.826 60.000 0.00 0.00 0.00 3.51
3595 4610 0.541063 TGGCTCCCGTAGTCTTGTCA 60.541 55.000 0.00 0.00 0.00 3.58
3596 4611 0.606604 TTGGCTCCCGTAGTCTTGTC 59.393 55.000 0.00 0.00 0.00 3.18
3597 4612 0.608640 CTTGGCTCCCGTAGTCTTGT 59.391 55.000 0.00 0.00 0.00 3.16
3598 4613 0.608640 ACTTGGCTCCCGTAGTCTTG 59.391 55.000 0.00 0.00 0.00 3.02
3599 4614 0.608640 CACTTGGCTCCCGTAGTCTT 59.391 55.000 0.00 0.00 0.00 3.01
3600 4615 1.889530 GCACTTGGCTCCCGTAGTCT 61.890 60.000 0.00 0.00 40.25 3.24
3601 4616 1.448013 GCACTTGGCTCCCGTAGTC 60.448 63.158 0.00 0.00 40.25 2.59
3602 4617 1.764571 TTGCACTTGGCTCCCGTAGT 61.765 55.000 0.00 0.00 45.15 2.73
3603 4618 0.605319 TTTGCACTTGGCTCCCGTAG 60.605 55.000 0.00 0.00 45.15 3.51
3604 4619 0.605319 CTTTGCACTTGGCTCCCGTA 60.605 55.000 0.00 0.00 45.15 4.02
3605 4620 1.898574 CTTTGCACTTGGCTCCCGT 60.899 57.895 0.00 0.00 45.15 5.28
3606 4621 1.898574 ACTTTGCACTTGGCTCCCG 60.899 57.895 0.00 0.00 45.15 5.14
3607 4622 0.823356 TCACTTTGCACTTGGCTCCC 60.823 55.000 0.00 0.00 45.15 4.30
3608 4623 1.032014 TTCACTTTGCACTTGGCTCC 58.968 50.000 0.00 0.00 45.15 4.70
3609 4624 2.869233 TTTCACTTTGCACTTGGCTC 57.131 45.000 0.00 0.00 45.15 4.70
3610 4625 2.224113 CCATTTCACTTTGCACTTGGCT 60.224 45.455 0.00 0.00 45.15 4.75
3611 4626 2.137523 CCATTTCACTTTGCACTTGGC 58.862 47.619 0.00 0.00 45.13 4.52
3612 4627 2.364970 TCCCATTTCACTTTGCACTTGG 59.635 45.455 0.00 0.00 0.00 3.61
3613 4628 3.181477 TGTCCCATTTCACTTTGCACTTG 60.181 43.478 0.00 0.00 0.00 3.16
3614 4629 3.030291 TGTCCCATTTCACTTTGCACTT 58.970 40.909 0.00 0.00 0.00 3.16
3615 4630 2.362077 GTGTCCCATTTCACTTTGCACT 59.638 45.455 0.00 0.00 0.00 4.40
3616 4631 2.100584 TGTGTCCCATTTCACTTTGCAC 59.899 45.455 0.00 0.00 35.82 4.57
3617 4632 2.361757 CTGTGTCCCATTTCACTTTGCA 59.638 45.455 0.00 0.00 35.82 4.08
3618 4633 2.362077 ACTGTGTCCCATTTCACTTTGC 59.638 45.455 0.00 0.00 35.82 3.68
3619 4634 4.654091 AACTGTGTCCCATTTCACTTTG 57.346 40.909 0.00 0.00 35.82 2.77
3620 4635 4.466015 ACAAACTGTGTCCCATTTCACTTT 59.534 37.500 0.00 0.00 34.38 2.66
3621 4636 4.023291 ACAAACTGTGTCCCATTTCACTT 58.977 39.130 0.00 0.00 34.38 3.16
3622 4637 3.631250 ACAAACTGTGTCCCATTTCACT 58.369 40.909 0.00 0.00 34.38 3.41
3623 4638 4.023193 CCTACAAACTGTGTCCCATTTCAC 60.023 45.833 0.00 0.00 41.98 3.18
3624 4639 4.141287 CCTACAAACTGTGTCCCATTTCA 58.859 43.478 0.00 0.00 41.98 2.69
3625 4640 3.057526 GCCTACAAACTGTGTCCCATTTC 60.058 47.826 0.00 0.00 41.98 2.17
3626 4641 2.890945 GCCTACAAACTGTGTCCCATTT 59.109 45.455 0.00 0.00 41.98 2.32
3627 4642 2.514803 GCCTACAAACTGTGTCCCATT 58.485 47.619 0.00 0.00 41.98 3.16
3628 4643 1.271926 GGCCTACAAACTGTGTCCCAT 60.272 52.381 0.00 0.00 41.98 4.00
3629 4644 0.109723 GGCCTACAAACTGTGTCCCA 59.890 55.000 0.00 0.00 41.98 4.37
3630 4645 0.608308 GGGCCTACAAACTGTGTCCC 60.608 60.000 0.84 0.00 41.98 4.46
3631 4646 0.109723 TGGGCCTACAAACTGTGTCC 59.890 55.000 4.53 0.00 41.98 4.02
3632 4647 1.880027 CTTGGGCCTACAAACTGTGTC 59.120 52.381 4.53 0.00 41.98 3.67
3633 4648 1.478654 CCTTGGGCCTACAAACTGTGT 60.479 52.381 4.53 0.00 44.82 3.72
3634 4649 1.202879 TCCTTGGGCCTACAAACTGTG 60.203 52.381 4.53 0.00 0.00 3.66
3635 4650 1.073923 CTCCTTGGGCCTACAAACTGT 59.926 52.381 4.53 0.00 0.00 3.55
3636 4651 1.073923 ACTCCTTGGGCCTACAAACTG 59.926 52.381 4.53 0.00 0.00 3.16
3637 4652 1.446016 ACTCCTTGGGCCTACAAACT 58.554 50.000 4.53 0.00 0.00 2.66
3638 4653 3.279434 CATACTCCTTGGGCCTACAAAC 58.721 50.000 4.53 0.00 0.00 2.93
3639 4654 2.241176 CCATACTCCTTGGGCCTACAAA 59.759 50.000 4.53 0.00 0.00 2.83
3640 4655 1.843851 CCATACTCCTTGGGCCTACAA 59.156 52.381 4.53 0.00 0.00 2.41
3641 4656 1.274184 ACCATACTCCTTGGGCCTACA 60.274 52.381 4.53 0.00 38.64 2.74
3642 4657 1.141053 CACCATACTCCTTGGGCCTAC 59.859 57.143 4.53 0.00 38.64 3.18
3643 4658 1.507140 CACCATACTCCTTGGGCCTA 58.493 55.000 4.53 0.00 38.64 3.93
3644 4659 1.281925 CCACCATACTCCTTGGGCCT 61.282 60.000 4.53 0.00 38.64 5.19
3645 4660 1.227383 CCACCATACTCCTTGGGCC 59.773 63.158 0.00 0.00 38.64 5.80
3646 4661 1.453928 GCCACCATACTCCTTGGGC 60.454 63.158 0.00 0.00 38.64 5.36
3647 4662 0.625849 AAGCCACCATACTCCTTGGG 59.374 55.000 0.00 0.00 38.64 4.12
3648 4663 1.683011 CCAAGCCACCATACTCCTTGG 60.683 57.143 3.63 3.63 44.39 3.61
3649 4664 1.683011 CCCAAGCCACCATACTCCTTG 60.683 57.143 0.00 0.00 34.26 3.61
3650 4665 0.625849 CCCAAGCCACCATACTCCTT 59.374 55.000 0.00 0.00 0.00 3.36
3651 4666 1.281925 CCCCAAGCCACCATACTCCT 61.282 60.000 0.00 0.00 0.00 3.69
3652 4667 1.227383 CCCCAAGCCACCATACTCC 59.773 63.158 0.00 0.00 0.00 3.85
3653 4668 1.227383 CCCCCAAGCCACCATACTC 59.773 63.158 0.00 0.00 0.00 2.59
3654 4669 1.543896 ACCCCCAAGCCACCATACT 60.544 57.895 0.00 0.00 0.00 2.12
3655 4670 1.379843 CACCCCCAAGCCACCATAC 60.380 63.158 0.00 0.00 0.00 2.39
3656 4671 3.095421 CACCCCCAAGCCACCATA 58.905 61.111 0.00 0.00 0.00 2.74
3657 4672 4.702274 GCACCCCCAAGCCACCAT 62.702 66.667 0.00 0.00 0.00 3.55
3659 4674 2.723464 TTAAGCACCCCCAAGCCACC 62.723 60.000 0.00 0.00 0.00 4.61
3660 4675 1.228737 TTAAGCACCCCCAAGCCAC 60.229 57.895 0.00 0.00 0.00 5.01
3661 4676 1.228737 GTTAAGCACCCCCAAGCCA 60.229 57.895 0.00 0.00 0.00 4.75
3662 4677 0.965866 GAGTTAAGCACCCCCAAGCC 60.966 60.000 0.00 0.00 0.00 4.35
3663 4678 0.038310 AGAGTTAAGCACCCCCAAGC 59.962 55.000 0.00 0.00 0.00 4.01
3664 4679 1.351017 TCAGAGTTAAGCACCCCCAAG 59.649 52.381 0.00 0.00 0.00 3.61
3665 4680 1.440618 TCAGAGTTAAGCACCCCCAA 58.559 50.000 0.00 0.00 0.00 4.12
3666 4681 1.440618 TTCAGAGTTAAGCACCCCCA 58.559 50.000 0.00 0.00 0.00 4.96
3667 4682 2.579410 TTTCAGAGTTAAGCACCCCC 57.421 50.000 0.00 0.00 0.00 5.40
3668 4683 5.468540 AATTTTTCAGAGTTAAGCACCCC 57.531 39.130 0.00 0.00 0.00 4.95
3669 4684 6.581166 CGTAAATTTTTCAGAGTTAAGCACCC 59.419 38.462 0.00 0.00 0.00 4.61
3670 4685 6.087687 GCGTAAATTTTTCAGAGTTAAGCACC 59.912 38.462 0.00 0.00 31.96 5.01
3671 4686 6.183359 CGCGTAAATTTTTCAGAGTTAAGCAC 60.183 38.462 0.00 0.00 31.37 4.40
3672 4687 5.849081 CGCGTAAATTTTTCAGAGTTAAGCA 59.151 36.000 0.00 0.00 31.37 3.91
3673 4688 5.849604 ACGCGTAAATTTTTCAGAGTTAAGC 59.150 36.000 11.67 0.00 0.00 3.09
3674 4689 6.183359 GCACGCGTAAATTTTTCAGAGTTAAG 60.183 38.462 13.44 0.00 0.00 1.85
3675 4690 5.622041 GCACGCGTAAATTTTTCAGAGTTAA 59.378 36.000 13.44 0.00 0.00 2.01
3676 4691 5.141568 GCACGCGTAAATTTTTCAGAGTTA 58.858 37.500 13.44 0.00 0.00 2.24
3677 4692 3.972502 GCACGCGTAAATTTTTCAGAGTT 59.027 39.130 13.44 0.00 0.00 3.01
3678 4693 3.551551 GCACGCGTAAATTTTTCAGAGT 58.448 40.909 13.44 0.00 0.00 3.24
3679 4694 2.908626 GGCACGCGTAAATTTTTCAGAG 59.091 45.455 13.44 0.00 0.00 3.35
3680 4695 2.350964 GGGCACGCGTAAATTTTTCAGA 60.351 45.455 13.44 0.00 0.00 3.27
3681 4696 1.982913 GGGCACGCGTAAATTTTTCAG 59.017 47.619 13.44 0.00 0.00 3.02
3682 4697 1.609555 AGGGCACGCGTAAATTTTTCA 59.390 42.857 13.44 0.00 0.00 2.69
3683 4698 2.341318 AGGGCACGCGTAAATTTTTC 57.659 45.000 13.44 0.00 0.00 2.29
3684 4699 2.668250 GAAGGGCACGCGTAAATTTTT 58.332 42.857 13.44 1.64 0.00 1.94
3685 4700 1.400500 CGAAGGGCACGCGTAAATTTT 60.400 47.619 13.44 2.87 0.00 1.82
3686 4701 0.167251 CGAAGGGCACGCGTAAATTT 59.833 50.000 13.44 4.51 0.00 1.82
3687 4702 1.791662 CGAAGGGCACGCGTAAATT 59.208 52.632 13.44 4.45 0.00 1.82
3688 4703 2.746803 GCGAAGGGCACGCGTAAAT 61.747 57.895 13.44 0.00 46.05 1.40
3689 4704 3.416382 GCGAAGGGCACGCGTAAA 61.416 61.111 13.44 0.00 46.05 2.01
3695 4710 2.511600 CCTAAGGCGAAGGGCACG 60.512 66.667 0.61 0.00 46.16 5.34
3696 4711 1.745489 CACCTAAGGCGAAGGGCAC 60.745 63.158 12.04 0.00 46.16 5.01
3697 4712 2.668632 CACCTAAGGCGAAGGGCA 59.331 61.111 12.04 0.00 46.16 5.36
3698 4713 2.124695 CCACCTAAGGCGAAGGGC 60.125 66.667 12.04 0.00 38.54 5.19
3699 4714 2.124695 GCCACCTAAGGCGAAGGG 60.125 66.667 12.04 0.95 46.12 3.95
3706 4721 0.676782 CGAACCAAGGCCACCTAAGG 60.677 60.000 5.01 0.00 35.75 2.69
3707 4722 0.323629 TCGAACCAAGGCCACCTAAG 59.676 55.000 5.01 0.00 31.13 2.18
3708 4723 0.766131 TTCGAACCAAGGCCACCTAA 59.234 50.000 5.01 0.00 31.13 2.69
3709 4724 0.988832 ATTCGAACCAAGGCCACCTA 59.011 50.000 5.01 0.00 31.13 3.08
3710 4725 0.609131 CATTCGAACCAAGGCCACCT 60.609 55.000 5.01 0.00 33.87 4.00
3711 4726 1.595093 CCATTCGAACCAAGGCCACC 61.595 60.000 5.01 0.00 0.00 4.61
3712 4727 0.608035 TCCATTCGAACCAAGGCCAC 60.608 55.000 5.01 0.00 0.00 5.01
3713 4728 0.111446 TTCCATTCGAACCAAGGCCA 59.889 50.000 5.01 0.00 0.00 5.36
3714 4729 0.811281 CTTCCATTCGAACCAAGGCC 59.189 55.000 0.00 0.00 0.00 5.19
3715 4730 0.811281 CCTTCCATTCGAACCAAGGC 59.189 55.000 15.22 0.00 0.00 4.35
3716 4731 2.359900 CTCCTTCCATTCGAACCAAGG 58.640 52.381 19.11 19.11 35.81 3.61
3717 4732 1.740025 GCTCCTTCCATTCGAACCAAG 59.260 52.381 0.00 2.78 0.00 3.61
3718 4733 1.613255 GGCTCCTTCCATTCGAACCAA 60.613 52.381 0.00 0.00 0.00 3.67
3719 4734 0.035439 GGCTCCTTCCATTCGAACCA 60.035 55.000 0.00 0.00 0.00 3.67
3720 4735 0.748367 GGGCTCCTTCCATTCGAACC 60.748 60.000 0.00 0.00 0.00 3.62
3721 4736 0.748367 GGGGCTCCTTCCATTCGAAC 60.748 60.000 0.00 0.00 0.00 3.95
3722 4737 1.204786 TGGGGCTCCTTCCATTCGAA 61.205 55.000 3.07 0.00 0.00 3.71
3723 4738 1.615124 TGGGGCTCCTTCCATTCGA 60.615 57.895 3.07 0.00 0.00 3.71
3724 4739 1.452108 GTGGGGCTCCTTCCATTCG 60.452 63.158 3.07 0.00 35.28 3.34
3725 4740 0.394899 CTGTGGGGCTCCTTCCATTC 60.395 60.000 3.07 0.00 35.28 2.67
3726 4741 0.846427 TCTGTGGGGCTCCTTCCATT 60.846 55.000 3.07 0.00 35.28 3.16
3727 4742 1.229951 TCTGTGGGGCTCCTTCCAT 60.230 57.895 3.07 0.00 35.28 3.41
3728 4743 2.206900 TCTGTGGGGCTCCTTCCA 59.793 61.111 3.07 0.00 0.00 3.53
3729 4744 1.920835 AGTCTGTGGGGCTCCTTCC 60.921 63.158 3.07 0.00 0.00 3.46
3730 4745 1.298014 CAGTCTGTGGGGCTCCTTC 59.702 63.158 3.07 0.00 0.00 3.46
3731 4746 1.462238 ACAGTCTGTGGGGCTCCTT 60.462 57.895 3.07 0.00 0.00 3.36
3732 4747 2.205462 ACAGTCTGTGGGGCTCCT 59.795 61.111 3.07 0.00 0.00 3.69
3733 4748 2.348998 CACAGTCTGTGGGGCTCC 59.651 66.667 23.09 0.00 44.27 4.70
3741 4756 2.224769 CCATAACCAACCCACAGTCTGT 60.225 50.000 0.00 0.00 0.00 3.41
3742 4757 2.436417 CCATAACCAACCCACAGTCTG 58.564 52.381 0.00 0.00 0.00 3.51
3743 4758 1.271926 GCCATAACCAACCCACAGTCT 60.272 52.381 0.00 0.00 0.00 3.24
3744 4759 1.173913 GCCATAACCAACCCACAGTC 58.826 55.000 0.00 0.00 0.00 3.51
3745 4760 0.480690 TGCCATAACCAACCCACAGT 59.519 50.000 0.00 0.00 0.00 3.55
3746 4761 1.272212 GTTGCCATAACCAACCCACAG 59.728 52.381 0.00 0.00 37.25 3.66
3747 4762 1.333177 GTTGCCATAACCAACCCACA 58.667 50.000 0.00 0.00 37.25 4.17
3752 4767 0.894835 CAGGGGTTGCCATAACCAAC 59.105 55.000 10.63 3.51 42.03 3.77
3753 4768 0.485099 ACAGGGGTTGCCATAACCAA 59.515 50.000 10.63 0.00 42.03 3.67
3754 4769 0.485099 AACAGGGGTTGCCATAACCA 59.515 50.000 10.63 0.00 42.03 3.67
3755 4770 1.182667 GAACAGGGGTTGCCATAACC 58.817 55.000 0.22 0.22 37.36 2.85
3756 4771 0.808755 CGAACAGGGGTTGCCATAAC 59.191 55.000 0.00 0.00 37.36 1.89
3757 4772 0.322997 CCGAACAGGGGTTGCCATAA 60.323 55.000 0.00 0.00 37.36 1.90
3758 4773 1.202099 TCCGAACAGGGGTTGCCATA 61.202 55.000 0.00 0.00 41.52 2.74
3759 4774 2.035626 CCGAACAGGGGTTGCCAT 59.964 61.111 0.00 0.00 37.36 4.40
3760 4775 3.172106 TCCGAACAGGGGTTGCCA 61.172 61.111 0.00 0.00 41.52 4.92
3761 4776 2.359975 CTCCGAACAGGGGTTGCC 60.360 66.667 0.00 0.00 41.52 4.52
3762 4777 2.198304 ATCCTCCGAACAGGGGTTGC 62.198 60.000 0.00 0.00 39.52 4.17
3763 4778 0.392998 CATCCTCCGAACAGGGGTTG 60.393 60.000 0.00 0.00 39.52 3.77
3764 4779 0.546747 TCATCCTCCGAACAGGGGTT 60.547 55.000 0.00 0.00 39.52 4.11
3765 4780 0.326618 ATCATCCTCCGAACAGGGGT 60.327 55.000 0.00 0.00 39.52 4.95
3766 4781 0.394565 GATCATCCTCCGAACAGGGG 59.605 60.000 0.00 0.00 41.41 4.79
3767 4782 1.342819 GAGATCATCCTCCGAACAGGG 59.657 57.143 0.00 0.00 41.52 4.45
3768 4783 2.034878 TGAGATCATCCTCCGAACAGG 58.965 52.381 0.00 0.00 42.97 4.00
3769 4784 2.545532 GCTGAGATCATCCTCCGAACAG 60.546 54.545 0.00 0.00 32.32 3.16
3770 4785 1.410517 GCTGAGATCATCCTCCGAACA 59.589 52.381 0.00 0.00 32.32 3.18
3771 4786 1.686052 AGCTGAGATCATCCTCCGAAC 59.314 52.381 0.00 0.00 32.32 3.95
3772 4787 2.079170 AGCTGAGATCATCCTCCGAA 57.921 50.000 0.00 0.00 32.32 4.30
3773 4788 1.959985 GAAGCTGAGATCATCCTCCGA 59.040 52.381 0.00 0.00 32.32 4.55
3774 4789 1.962807 AGAAGCTGAGATCATCCTCCG 59.037 52.381 0.00 0.00 32.32 4.63
3775 4790 4.420522 AAAGAAGCTGAGATCATCCTCC 57.579 45.455 0.00 0.00 32.32 4.30
3776 4791 6.073112 GCATAAAAGAAGCTGAGATCATCCTC 60.073 42.308 0.00 0.00 0.00 3.71
3777 4792 5.764192 GCATAAAAGAAGCTGAGATCATCCT 59.236 40.000 0.00 0.00 0.00 3.24
3778 4793 5.048852 GGCATAAAAGAAGCTGAGATCATCC 60.049 44.000 0.00 0.00 0.00 3.51
3779 4794 5.764192 AGGCATAAAAGAAGCTGAGATCATC 59.236 40.000 0.00 0.00 0.00 2.92
3780 4795 5.692928 AGGCATAAAAGAAGCTGAGATCAT 58.307 37.500 0.00 0.00 0.00 2.45
3781 4796 5.108187 AGGCATAAAAGAAGCTGAGATCA 57.892 39.130 0.00 0.00 0.00 2.92
3782 4797 4.514816 GGAGGCATAAAAGAAGCTGAGATC 59.485 45.833 0.00 0.00 0.00 2.75
3783 4798 4.080129 TGGAGGCATAAAAGAAGCTGAGAT 60.080 41.667 0.00 0.00 0.00 2.75
3784 4799 3.264193 TGGAGGCATAAAAGAAGCTGAGA 59.736 43.478 0.00 0.00 0.00 3.27
3785 4800 3.376546 GTGGAGGCATAAAAGAAGCTGAG 59.623 47.826 0.00 0.00 0.00 3.35
3786 4801 3.347216 GTGGAGGCATAAAAGAAGCTGA 58.653 45.455 0.00 0.00 0.00 4.26
3787 4802 2.424956 GGTGGAGGCATAAAAGAAGCTG 59.575 50.000 0.00 0.00 0.00 4.24
3788 4803 2.041620 TGGTGGAGGCATAAAAGAAGCT 59.958 45.455 0.00 0.00 0.00 3.74
3789 4804 2.164422 GTGGTGGAGGCATAAAAGAAGC 59.836 50.000 0.00 0.00 0.00 3.86



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.