Multiple sequence alignment - TraesCS1B01G198000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G198000 chr1B 100.000 6989 0 0 1 6989 356202310 356209298 0.000000e+00 12907.0
1 TraesCS1B01G198000 chr1B 89.209 139 12 3 6263 6398 637500224 637500362 3.350000e-38 171.0
2 TraesCS1B01G198000 chr1B 91.667 120 10 0 6118 6237 8855865 8855984 4.340000e-37 167.0
3 TraesCS1B01G198000 chr1B 95.556 90 2 2 5374 5462 356207771 356207683 7.310000e-30 143.0
4 TraesCS1B01G198000 chr1B 86.022 93 7 3 3133 3219 597156890 597156798 2.080000e-15 95.3
5 TraesCS1B01G198000 chr1A 97.049 2643 63 10 3433 6068 330768880 330766246 0.000000e+00 4434.0
6 TraesCS1B01G198000 chr1A 92.021 1880 88 26 176 2023 330772233 330770384 0.000000e+00 2584.0
7 TraesCS1B01G198000 chr1A 95.408 980 27 8 2472 3436 330769982 330769006 0.000000e+00 1544.0
8 TraesCS1B01G198000 chr1A 91.892 407 19 8 1987 2383 330770383 330769981 2.200000e-154 556.0
9 TraesCS1B01G198000 chr1A 91.379 174 14 1 3 176 330772609 330772437 3.260000e-58 237.0
10 TraesCS1B01G198000 chr1A 89.241 158 11 2 6812 6963 330766209 330766052 7.150000e-45 193.0
11 TraesCS1B01G198000 chr1A 89.583 96 7 3 5375 5468 298603602 298603696 1.230000e-22 119.0
12 TraesCS1B01G198000 chr1D 95.176 2674 84 13 3433 6068 257001884 256999218 0.000000e+00 4181.0
13 TraesCS1B01G198000 chr1D 96.115 1467 32 12 1987 3436 257003472 257002014 0.000000e+00 2370.0
14 TraesCS1B01G198000 chr1D 96.399 1194 35 5 830 2023 257004658 257003473 0.000000e+00 1960.0
15 TraesCS1B01G198000 chr1D 89.474 646 32 13 207 816 257005349 257004704 0.000000e+00 784.0
16 TraesCS1B01G198000 chr1D 94.250 400 17 2 6595 6989 256998970 256998572 2.160000e-169 606.0
17 TraesCS1B01G198000 chr1D 95.279 233 10 1 6397 6629 256999205 256998974 1.110000e-97 368.0
18 TraesCS1B01G198000 chr1D 94.828 174 9 0 3 176 257020649 257020476 8.930000e-69 272.0
19 TraesCS1B01G198000 chr1D 89.147 129 13 1 6116 6243 344594110 344594238 7.260000e-35 159.0
20 TraesCS1B01G198000 chr1D 91.011 89 7 1 5380 5468 249030399 249030312 1.230000e-22 119.0
21 TraesCS1B01G198000 chr1D 97.826 46 1 0 6242 6287 193683188 193683143 5.810000e-11 80.5
22 TraesCS1B01G198000 chr6D 94.372 231 10 3 1229 1459 245266809 245267036 1.120000e-92 351.0
23 TraesCS1B01G198000 chr6D 94.872 117 5 1 1125 1240 245267039 245267155 1.550000e-41 182.0
24 TraesCS1B01G198000 chr6D 92.562 121 8 1 6283 6402 405193805 405193925 9.320000e-39 172.0
25 TraesCS1B01G198000 chr2D 94.783 115 5 1 6285 6398 617397865 617397751 2.000000e-40 178.0
26 TraesCS1B01G198000 chr2D 87.879 99 9 3 5375 5471 500366521 500366618 5.730000e-21 113.0
27 TraesCS1B01G198000 chr2D 87.059 85 5 3 3135 3213 86080997 86080913 2.680000e-14 91.6
28 TraesCS1B01G198000 chr4D 92.063 126 9 1 6274 6398 467632335 467632460 7.200000e-40 176.0
29 TraesCS1B01G198000 chr4D 94.118 51 2 1 6234 6283 339044456 339044406 7.520000e-10 76.8
30 TraesCS1B01G198000 chr4B 93.162 117 7 1 6292 6407 299557584 299557700 3.350000e-38 171.0
31 TraesCS1B01G198000 chr4B 91.803 122 10 0 6117 6238 325710701 325710580 3.350000e-38 171.0
32 TraesCS1B01G198000 chr4B 93.103 116 5 3 6293 6406 452855072 452854958 4.340000e-37 167.0
33 TraesCS1B01G198000 chr4B 85.882 85 6 3 3135 3213 41531417 41531501 1.250000e-12 86.1
34 TraesCS1B01G198000 chr2B 92.437 119 9 0 6119 6237 657072113 657072231 3.350000e-38 171.0
35 TraesCS1B01G198000 chr2B 90.551 127 12 0 6111 6237 329979293 329979419 1.210000e-37 169.0
36 TraesCS1B01G198000 chr2B 87.903 124 13 2 6116 6238 196266788 196266666 2.030000e-30 145.0
37 TraesCS1B01G198000 chr2B 87.903 124 14 1 6116 6238 707570113 707570236 2.030000e-30 145.0
38 TraesCS1B01G198000 chr2B 85.882 85 6 3 3135 3213 139072915 139072831 1.250000e-12 86.1
39 TraesCS1B01G198000 chr7B 91.803 122 8 2 6292 6412 730205221 730205101 1.210000e-37 169.0
40 TraesCS1B01G198000 chr7B 87.805 123 15 0 6119 6241 747173300 747173178 2.030000e-30 145.0
41 TraesCS1B01G198000 chr7B 88.182 110 10 3 5361 5469 559531921 559532028 2.050000e-25 128.0
42 TraesCS1B01G198000 chr3B 91.736 121 10 0 6119 6239 434425177 434425057 1.210000e-37 169.0
43 TraesCS1B01G198000 chr3B 91.667 120 10 0 6120 6239 770246969 770247088 4.340000e-37 167.0
44 TraesCS1B01G198000 chr5B 91.803 122 7 3 6286 6404 632580516 632580637 4.340000e-37 167.0
45 TraesCS1B01G198000 chr5B 88.618 123 13 1 6116 6237 708040514 708040636 1.570000e-31 148.0
46 TraesCS1B01G198000 chr5B 86.667 75 8 1 6211 6283 447792362 447792436 1.620000e-11 82.4
47 TraesCS1B01G198000 chr5B 95.918 49 1 1 6236 6283 590457306 590457258 2.090000e-10 78.7
48 TraesCS1B01G198000 chr5B 92.453 53 3 1 6234 6285 298180234 298180182 2.700000e-09 75.0
49 TraesCS1B01G198000 chr3D 86.452 155 17 2 6242 6395 42634670 42634821 4.340000e-37 167.0
50 TraesCS1B01G198000 chr3D 88.889 99 9 2 5380 5477 181108114 181108017 3.420000e-23 121.0
51 TraesCS1B01G198000 chr3D 95.918 49 2 0 6240 6288 430148107 430148155 5.810000e-11 80.5
52 TraesCS1B01G198000 chr7D 91.597 119 10 0 6119 6237 417915429 417915547 1.560000e-36 165.0
53 TraesCS1B01G198000 chr2A 91.597 119 10 0 6120 6238 606523687 606523805 1.560000e-36 165.0
54 TraesCS1B01G198000 chr2A 88.095 126 14 1 6112 6237 729162127 729162003 1.570000e-31 148.0
55 TraesCS1B01G198000 chr2A 87.059 85 5 3 3135 3213 86440627 86440543 2.680000e-14 91.6
56 TraesCS1B01G198000 chr4A 87.218 133 15 2 6106 6238 660640675 660640805 4.370000e-32 150.0
57 TraesCS1B01G198000 chr4A 86.364 88 8 3 3134 3217 25024721 25024634 7.460000e-15 93.5
58 TraesCS1B01G198000 chr4A 85.882 85 6 3 3135 3213 27643526 27643610 1.250000e-12 86.1
59 TraesCS1B01G198000 chr3A 86.822 129 17 0 6116 6244 693985085 693985213 2.030000e-30 145.0
60 TraesCS1B01G198000 chr7A 93.182 88 5 1 5375 5462 632520559 632520645 2.050000e-25 128.0
61 TraesCS1B01G198000 chr5D 89.535 86 6 1 3135 3217 546857278 546857363 9.590000e-19 106.0
62 TraesCS1B01G198000 chr5D 92.308 52 2 2 6240 6289 385408509 385408458 9.720000e-09 73.1
63 TraesCS1B01G198000 chrUn 92.453 53 4 0 6240 6292 39207337 39207285 7.520000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G198000 chr1B 356202310 356209298 6988 False 12907.000000 12907 100.000000 1 6989 1 chr1B.!!$F2 6988
1 TraesCS1B01G198000 chr1A 330766052 330772609 6557 True 1591.333333 4434 92.831667 3 6963 6 chr1A.!!$R1 6960
2 TraesCS1B01G198000 chr1D 256998572 257005349 6777 True 1711.500000 4181 94.448833 207 6989 6 chr1D.!!$R4 6782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
922 1201 0.314302 CCACCGAGTCGTCTCTTTGT 59.686 55.000 12.31 0.0 38.45 2.83 F
1032 1311 0.858369 ATCCCCGAACCCTAGCTCTA 59.142 55.000 0.00 0.0 0.00 2.43 F
1576 1855 0.960364 TCGTTGCTGAGGGATTTGCC 60.960 55.000 0.00 0.0 0.00 4.52 F
2948 3277 0.698818 CCAGAAAAGGCTACTGGGGT 59.301 55.000 20.36 0.0 44.96 4.95 F
3994 4472 0.471617 GTGGTGCTCAGATATGGGCT 59.528 55.000 14.33 0.0 0.00 5.19 F
4069 4547 1.453155 CTGTGCGAGGGCTTTTGTAT 58.547 50.000 0.00 0.0 40.82 2.29 F
5194 5681 2.069776 CCAGAGAAAGGGCCTGACA 58.930 57.895 6.92 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2144 2460 0.454600 CAGCACAAGGGCATAGCAAG 59.545 55.000 0.00 0.0 35.83 4.01 R
2645 2971 3.534357 TTGGCTAACAGGAATGGGAAA 57.466 42.857 0.00 0.0 0.00 3.13 R
3032 3361 0.311790 CCTGTGAATGTGCGCAAGTT 59.688 50.000 14.00 10.4 41.68 2.66 R
4171 4649 1.065998 CGTCCGGATACCCCTTGAAAA 60.066 52.381 7.81 0.0 0.00 2.29 R
5377 5865 0.182775 GCATTATGGAACGGAGGGGT 59.817 55.000 0.00 0.0 0.00 4.95 R
5395 5883 3.955771 TGAACTAAAACCACGACAAGC 57.044 42.857 0.00 0.0 0.00 4.01 R
6222 6738 0.179936 ACTAGTACTCCCTCCGTCCG 59.820 60.000 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.772182 ACAAGTGACGAAGAGAAGCG 58.228 50.000 0.00 0.00 0.00 4.68
42 43 1.166531 AGAAGCGACAACAAGGGCAC 61.167 55.000 0.00 0.00 0.00 5.01
44 45 4.025401 GCGACAACAAGGGCACGG 62.025 66.667 0.00 0.00 0.00 4.94
47 48 1.966451 GACAACAAGGGCACGGAGG 60.966 63.158 0.00 0.00 0.00 4.30
51 52 0.475044 AACAAGGGCACGGAGGTTAA 59.525 50.000 0.00 0.00 0.00 2.01
69 70 5.041940 GGTTAATCATGTGAGACGTAGACC 58.958 45.833 0.00 0.00 0.00 3.85
102 103 9.606631 ATGGATACTCATGAACTTTCTACTTTC 57.393 33.333 0.00 0.00 37.61 2.62
103 104 8.816894 TGGATACTCATGAACTTTCTACTTTCT 58.183 33.333 0.00 0.00 37.61 2.52
138 139 4.510711 GTCCATGACATGCTCTAGATGTTG 59.489 45.833 10.10 0.00 34.10 3.33
157 158 4.082300 TGTTGTGTCAATGTGGCCATATTC 60.082 41.667 23.55 14.54 0.00 1.75
165 166 5.421374 TCAATGTGGCCATATTCAATCAACA 59.579 36.000 23.55 5.74 0.00 3.33
169 170 3.243468 TGGCCATATTCAATCAACATGCG 60.243 43.478 0.00 0.00 0.00 4.73
183 388 4.874966 TCAACATGCGTGATGTGATATTGA 59.125 37.500 14.17 6.58 45.12 2.57
187 392 4.816786 TGCGTGATGTGATATTGAATGG 57.183 40.909 0.00 0.00 0.00 3.16
190 395 4.609113 GCGTGATGTGATATTGAATGGTCG 60.609 45.833 0.00 0.00 0.00 4.79
239 444 5.339008 TCTTCCTGTGTATATCGTGCTTT 57.661 39.130 0.00 0.00 0.00 3.51
251 456 1.614903 TCGTGCTTTACCTTTCTCCGA 59.385 47.619 0.00 0.00 0.00 4.55
294 499 2.849943 ACAATGTCATAGGGTTAGGCCA 59.150 45.455 5.01 0.00 39.65 5.36
311 516 5.589367 AGGCCATACCATGAGAACATAAT 57.411 39.130 5.01 0.00 43.14 1.28
322 527 7.606456 ACCATGAGAACATAATTGTTTACTCGT 59.394 33.333 0.00 0.00 46.01 4.18
335 540 0.606096 TACTCGTGTCACCACCCATG 59.394 55.000 0.00 0.00 38.41 3.66
407 612 1.546323 CCCCTCAGACACAATGTGCTT 60.546 52.381 14.01 0.00 36.98 3.91
409 614 3.411446 CCCTCAGACACAATGTGCTTTA 58.589 45.455 14.01 2.21 36.98 1.85
467 672 3.953612 TGAGCAATCTCTTGGTTTGTTGT 59.046 39.130 0.00 0.00 42.91 3.32
526 733 5.545658 TTCAAGCAGACGGAACAATTATC 57.454 39.130 0.00 0.00 0.00 1.75
536 744 5.985781 ACGGAACAATTATCGAATGTATGC 58.014 37.500 0.00 0.00 0.00 3.14
545 753 9.401873 CAATTATCGAATGTATGCATCACAAAT 57.598 29.630 0.19 0.61 33.50 2.32
609 824 7.870826 TGGAATTTGTAGACATTGTTGTACAG 58.129 34.615 10.90 0.00 35.79 2.74
660 875 7.972832 ATATAACCGAGTTTGACAAGAAACA 57.027 32.000 0.00 0.00 38.14 2.83
673 888 8.736751 TTGACAAGAAACAAAAACTACAAGTC 57.263 30.769 0.00 0.00 0.00 3.01
674 889 7.309920 TGACAAGAAACAAAAACTACAAGTCC 58.690 34.615 0.00 0.00 0.00 3.85
678 920 7.462571 AGAAACAAAAACTACAAGTCCAGTT 57.537 32.000 0.00 0.00 36.56 3.16
699 941 7.036220 CAGTTACAGTAGAATCAACGGAGAAT 58.964 38.462 0.00 0.00 0.00 2.40
816 1058 6.979817 ACAATATGTTACGCCGTATTCTTGTA 59.020 34.615 0.00 0.00 0.00 2.41
817 1059 6.998258 ATATGTTACGCCGTATTCTTGTAC 57.002 37.500 0.00 0.00 0.00 2.90
819 1061 4.168014 TGTTACGCCGTATTCTTGTACAG 58.832 43.478 0.00 0.00 0.00 2.74
822 1064 2.991190 ACGCCGTATTCTTGTACAGTTG 59.009 45.455 0.00 0.00 0.00 3.16
823 1065 2.347452 CGCCGTATTCTTGTACAGTTGG 59.653 50.000 0.00 0.00 0.00 3.77
824 1066 3.592059 GCCGTATTCTTGTACAGTTGGA 58.408 45.455 0.00 0.00 0.00 3.53
825 1067 3.617263 GCCGTATTCTTGTACAGTTGGAG 59.383 47.826 0.00 0.00 0.00 3.86
826 1068 4.817517 CCGTATTCTTGTACAGTTGGAGT 58.182 43.478 0.00 0.00 0.00 3.85
827 1069 5.622914 GCCGTATTCTTGTACAGTTGGAGTA 60.623 44.000 0.00 0.00 0.00 2.59
828 1070 5.803967 CCGTATTCTTGTACAGTTGGAGTAC 59.196 44.000 0.00 4.71 41.63 2.73
922 1201 0.314302 CCACCGAGTCGTCTCTTTGT 59.686 55.000 12.31 0.00 38.45 2.83
927 1206 1.061485 GAGTCGTCTCTTTGTTCGCC 58.939 55.000 2.19 0.00 37.68 5.54
1032 1311 0.858369 ATCCCCGAACCCTAGCTCTA 59.142 55.000 0.00 0.00 0.00 2.43
1576 1855 0.960364 TCGTTGCTGAGGGATTTGCC 60.960 55.000 0.00 0.00 0.00 4.52
1603 1882 3.639008 CAGCGTGCACAGCGTGAA 61.639 61.111 18.64 0.00 40.04 3.18
1681 1960 2.753029 GGTGGTTGCCTCTGCTCT 59.247 61.111 0.00 0.00 38.71 4.09
2031 2347 1.063942 GGGTTACTTGCAGGGGCTATT 60.064 52.381 0.00 0.00 41.91 1.73
2035 2351 2.717639 ACTTGCAGGGGCTATTGTAG 57.282 50.000 0.00 0.00 41.91 2.74
2112 2428 7.921786 TGCAGTTGCTTAGAACAATAGTTAT 57.078 32.000 5.62 0.00 42.66 1.89
2144 2460 3.680458 GCTGTGTGAGTTAGTTAAGCCTC 59.320 47.826 0.00 0.00 0.00 4.70
2645 2971 7.548075 CCTATAACGAACAACTAAACCTGTCAT 59.452 37.037 0.00 0.00 0.00 3.06
2752 3080 7.766219 TTATACTTGAATTTCGTGCTACTCC 57.234 36.000 0.00 0.00 0.00 3.85
2854 3182 3.572255 TGCACTTGTGGGACTTTATTTCC 59.428 43.478 2.81 0.00 0.00 3.13
2948 3277 0.698818 CCAGAAAAGGCTACTGGGGT 59.301 55.000 20.36 0.00 44.96 4.95
3032 3361 4.439968 TCATTTTGCTTGCAAACATCACA 58.560 34.783 18.74 5.47 0.00 3.58
3240 3575 5.220854 GGCTGCGTATGTAGATGACAAAAAT 60.221 40.000 3.98 0.00 42.78 1.82
3241 3576 6.258160 GCTGCGTATGTAGATGACAAAAATT 58.742 36.000 3.98 0.00 42.78 1.82
3242 3577 6.412072 GCTGCGTATGTAGATGACAAAAATTC 59.588 38.462 3.98 0.00 42.78 2.17
3243 3578 7.371126 TGCGTATGTAGATGACAAAAATTCA 57.629 32.000 0.00 0.00 42.78 2.57
3244 3579 7.463544 TGCGTATGTAGATGACAAAAATTCAG 58.536 34.615 0.00 0.00 42.78 3.02
3246 3581 7.201609 GCGTATGTAGATGACAAAAATTCAGGA 60.202 37.037 0.00 0.00 42.78 3.86
3248 3583 9.994432 GTATGTAGATGACAAAAATTCAGGAAG 57.006 33.333 0.00 0.00 42.78 3.46
3494 3972 4.510571 GAAAAACTATACTTCAGGGGCGA 58.489 43.478 0.00 0.00 0.00 5.54
3622 4100 0.688087 AGCCTACTCAGCCCAGGTAC 60.688 60.000 0.00 0.00 0.00 3.34
3627 4105 1.694169 CTCAGCCCAGGTACCCCAT 60.694 63.158 8.74 0.00 0.00 4.00
3725 4203 1.600638 CAGAGGCAGCCACTCATGA 59.399 57.895 15.80 0.00 37.43 3.07
3838 4316 1.670083 GGAGGTGTGTTGTACCGGC 60.670 63.158 0.00 0.00 43.06 6.13
3920 4398 2.623418 TCTCCTTCTCTAGGTTGGCA 57.377 50.000 0.00 0.00 45.03 4.92
3956 4434 0.531200 TTTTGGTTTTCGTTGCCGGT 59.469 45.000 1.90 0.00 33.95 5.28
3994 4472 0.471617 GTGGTGCTCAGATATGGGCT 59.528 55.000 14.33 0.00 0.00 5.19
4035 4513 2.079925 GCATCGAGGGGAGAATAATGC 58.920 52.381 0.00 0.00 0.00 3.56
4069 4547 1.453155 CTGTGCGAGGGCTTTTGTAT 58.547 50.000 0.00 0.00 40.82 2.29
4163 4641 8.765488 AATCTTTTTGGAAAATGGAAAATGGT 57.235 26.923 0.00 0.00 0.00 3.55
4171 4649 5.359860 GGAAAATGGAAAATGGTCCGATACT 59.640 40.000 0.00 0.00 40.96 2.12
4212 4690 4.062991 CGTATAAAACCCCTGGTATGCTC 58.937 47.826 0.00 0.00 33.12 4.26
4289 4769 2.087646 CTTACTCTTTCCTTGCCTGCC 58.912 52.381 0.00 0.00 0.00 4.85
4438 4918 6.183360 TGGCCACTATGTTTCTTATATCGACA 60.183 38.462 0.00 0.00 0.00 4.35
4702 5186 3.265791 CACTTGAAGCTGATCAGGTACC 58.734 50.000 26.71 20.53 37.52 3.34
4734 5218 9.439461 CTATATATGACTTATGGGGATCCTTCA 57.561 37.037 12.58 11.06 0.00 3.02
4834 5320 8.576442 AGATGTTGTAATAACTCCTTGGTTTTG 58.424 33.333 0.00 0.00 0.00 2.44
4884 5370 3.119743 AGGATCACATTTGTGCATTCACG 60.120 43.478 5.81 0.00 46.01 4.35
4955 5441 6.992715 CCACTATATTTTCTCCTAGTGTTGGG 59.007 42.308 7.54 0.00 39.47 4.12
4957 5443 7.711339 CACTATATTTTCTCCTAGTGTTGGGAC 59.289 40.741 0.00 0.00 37.41 4.46
5194 5681 2.069776 CCAGAGAAAGGGCCTGACA 58.930 57.895 6.92 0.00 0.00 3.58
5395 5883 1.211949 ACACCCCTCCGTTCCATAATG 59.788 52.381 0.00 0.00 0.00 1.90
5965 6481 0.912486 GTGGGGACTTCCAGCTGTAT 59.088 55.000 13.81 0.00 37.50 2.29
5984 6500 6.073003 GCTGTATGGCAATATACTTGACTTCC 60.073 42.308 0.00 0.00 35.16 3.46
6058 6574 3.273434 GGATCAGTTGACTGCTGCAATA 58.727 45.455 3.02 0.00 43.46 1.90
6068 6584 6.609237 TGACTGCTGCAATATTTCATACTC 57.391 37.500 3.02 0.00 0.00 2.59
6069 6585 5.528690 TGACTGCTGCAATATTTCATACTCC 59.471 40.000 3.02 0.00 0.00 3.85
6070 6586 4.823989 ACTGCTGCAATATTTCATACTCCC 59.176 41.667 3.02 0.00 0.00 4.30
6072 6588 5.065914 TGCTGCAATATTTCATACTCCCTC 58.934 41.667 0.00 0.00 0.00 4.30
6073 6589 4.457257 GCTGCAATATTTCATACTCCCTCC 59.543 45.833 0.00 0.00 0.00 4.30
6075 6591 4.346709 TGCAATATTTCATACTCCCTCCGA 59.653 41.667 0.00 0.00 0.00 4.55
6076 6592 5.163248 TGCAATATTTCATACTCCCTCCGAA 60.163 40.000 0.00 0.00 0.00 4.30
6077 6593 5.179555 GCAATATTTCATACTCCCTCCGAAC 59.820 44.000 0.00 0.00 0.00 3.95
6078 6594 6.525629 CAATATTTCATACTCCCTCCGAACT 58.474 40.000 0.00 0.00 0.00 3.01
6079 6595 7.667557 CAATATTTCATACTCCCTCCGAACTA 58.332 38.462 0.00 0.00 0.00 2.24
6080 6596 7.850935 ATATTTCATACTCCCTCCGAACTAA 57.149 36.000 0.00 0.00 0.00 2.24
6081 6597 6.555463 ATTTCATACTCCCTCCGAACTAAA 57.445 37.500 0.00 0.00 0.00 1.85
6082 6598 6.363167 TTTCATACTCCCTCCGAACTAAAA 57.637 37.500 0.00 0.00 0.00 1.52
6083 6599 6.555463 TTCATACTCCCTCCGAACTAAAAT 57.445 37.500 0.00 0.00 0.00 1.82
6084 6600 7.664552 TTCATACTCCCTCCGAACTAAAATA 57.335 36.000 0.00 0.00 0.00 1.40
6085 6601 7.286215 TCATACTCCCTCCGAACTAAAATAG 57.714 40.000 0.00 0.00 0.00 1.73
6086 6602 7.064866 TCATACTCCCTCCGAACTAAAATAGA 58.935 38.462 0.00 0.00 0.00 1.98
6087 6603 7.728981 TCATACTCCCTCCGAACTAAAATAGAT 59.271 37.037 0.00 0.00 0.00 1.98
6088 6604 6.163135 ACTCCCTCCGAACTAAAATAGATG 57.837 41.667 0.00 0.00 0.00 2.90
6089 6605 5.897824 ACTCCCTCCGAACTAAAATAGATGA 59.102 40.000 0.00 0.00 0.00 2.92
6090 6606 6.158023 TCCCTCCGAACTAAAATAGATGAC 57.842 41.667 0.00 0.00 0.00 3.06
6091 6607 5.070047 TCCCTCCGAACTAAAATAGATGACC 59.930 44.000 0.00 0.00 0.00 4.02
6092 6608 5.298347 CCTCCGAACTAAAATAGATGACCC 58.702 45.833 0.00 0.00 0.00 4.46
6093 6609 5.163343 CCTCCGAACTAAAATAGATGACCCA 60.163 44.000 0.00 0.00 0.00 4.51
6094 6610 6.302535 TCCGAACTAAAATAGATGACCCAA 57.697 37.500 0.00 0.00 0.00 4.12
6095 6611 6.110707 TCCGAACTAAAATAGATGACCCAAC 58.889 40.000 0.00 0.00 0.00 3.77
6096 6612 6.070424 TCCGAACTAAAATAGATGACCCAACT 60.070 38.462 0.00 0.00 0.00 3.16
6097 6613 6.598064 CCGAACTAAAATAGATGACCCAACTT 59.402 38.462 0.00 0.00 0.00 2.66
6098 6614 7.120726 CCGAACTAAAATAGATGACCCAACTTT 59.879 37.037 0.00 0.00 0.00 2.66
6099 6615 9.158233 CGAACTAAAATAGATGACCCAACTTTA 57.842 33.333 0.00 0.00 0.00 1.85
6105 6621 9.990868 AAAATAGATGACCCAACTTTATACCTT 57.009 29.630 0.00 0.00 0.00 3.50
6106 6622 9.990868 AAATAGATGACCCAACTTTATACCTTT 57.009 29.630 0.00 0.00 0.00 3.11
6126 6642 8.676397 ACCTTTATACTAACTTTGTACTCCCT 57.324 34.615 0.00 0.00 0.00 4.20
6127 6643 9.109246 ACCTTTATACTAACTTTGTACTCCCTT 57.891 33.333 0.00 0.00 0.00 3.95
6128 6644 9.597170 CCTTTATACTAACTTTGTACTCCCTTC 57.403 37.037 0.00 0.00 0.00 3.46
6129 6645 9.298774 CTTTATACTAACTTTGTACTCCCTTCG 57.701 37.037 0.00 0.00 0.00 3.79
6130 6646 6.847421 ATACTAACTTTGTACTCCCTTCGT 57.153 37.500 0.00 0.00 0.00 3.85
6131 6647 5.131594 ACTAACTTTGTACTCCCTTCGTC 57.868 43.478 0.00 0.00 0.00 4.20
6132 6648 3.397849 AACTTTGTACTCCCTTCGTCC 57.602 47.619 0.00 0.00 0.00 4.79
6133 6649 1.271656 ACTTTGTACTCCCTTCGTCCG 59.728 52.381 0.00 0.00 0.00 4.79
6134 6650 0.604578 TTTGTACTCCCTTCGTCCGG 59.395 55.000 0.00 0.00 0.00 5.14
6135 6651 0.251297 TTGTACTCCCTTCGTCCGGA 60.251 55.000 0.00 0.00 0.00 5.14
6136 6652 0.251297 TGTACTCCCTTCGTCCGGAA 60.251 55.000 5.23 0.00 0.00 4.30
6137 6653 0.890683 GTACTCCCTTCGTCCGGAAA 59.109 55.000 5.23 0.00 33.34 3.13
6138 6654 1.273327 GTACTCCCTTCGTCCGGAAAA 59.727 52.381 5.23 2.53 33.34 2.29
6139 6655 0.760572 ACTCCCTTCGTCCGGAAAAA 59.239 50.000 5.23 2.10 33.34 1.94
6140 6656 1.154197 CTCCCTTCGTCCGGAAAAAC 58.846 55.000 5.23 0.00 33.34 2.43
6141 6657 0.760572 TCCCTTCGTCCGGAAAAACT 59.239 50.000 5.23 0.00 33.34 2.66
6142 6658 1.141455 TCCCTTCGTCCGGAAAAACTT 59.859 47.619 5.23 0.00 33.34 2.66
6143 6659 1.265905 CCCTTCGTCCGGAAAAACTTG 59.734 52.381 5.23 0.00 33.34 3.16
6144 6660 1.944709 CCTTCGTCCGGAAAAACTTGT 59.055 47.619 5.23 0.00 33.34 3.16
6145 6661 2.032290 CCTTCGTCCGGAAAAACTTGTC 60.032 50.000 5.23 0.00 33.34 3.18
6146 6662 1.585297 TCGTCCGGAAAAACTTGTCC 58.415 50.000 5.23 0.00 0.00 4.02
6147 6663 0.589708 CGTCCGGAAAAACTTGTCCC 59.410 55.000 5.23 0.00 0.00 4.46
6148 6664 1.682740 GTCCGGAAAAACTTGTCCCA 58.317 50.000 5.23 0.00 0.00 4.37
6149 6665 2.025898 GTCCGGAAAAACTTGTCCCAA 58.974 47.619 5.23 0.00 0.00 4.12
6150 6666 2.034179 GTCCGGAAAAACTTGTCCCAAG 59.966 50.000 5.23 2.54 0.00 3.61
6151 6667 1.269569 CCGGAAAAACTTGTCCCAAGC 60.270 52.381 0.00 0.00 0.00 4.01
6152 6668 1.681264 CGGAAAAACTTGTCCCAAGCT 59.319 47.619 3.96 0.00 0.00 3.74
6153 6669 2.100749 CGGAAAAACTTGTCCCAAGCTT 59.899 45.455 0.00 0.00 0.00 3.74
6154 6670 3.457234 GGAAAAACTTGTCCCAAGCTTG 58.543 45.455 19.93 19.93 0.00 4.01
6155 6671 3.118775 GGAAAAACTTGTCCCAAGCTTGT 60.119 43.478 24.35 1.49 0.00 3.16
6156 6672 4.503910 GAAAAACTTGTCCCAAGCTTGTT 58.496 39.130 24.35 8.38 0.00 2.83
6157 6673 3.801114 AAACTTGTCCCAAGCTTGTTC 57.199 42.857 24.35 14.17 0.00 3.18
6158 6674 1.692411 ACTTGTCCCAAGCTTGTTCC 58.308 50.000 24.35 11.81 0.00 3.62
6159 6675 1.215423 ACTTGTCCCAAGCTTGTTCCT 59.785 47.619 24.35 0.00 0.00 3.36
6160 6676 2.310538 CTTGTCCCAAGCTTGTTCCTT 58.689 47.619 24.35 0.00 0.00 3.36
6161 6677 3.117663 ACTTGTCCCAAGCTTGTTCCTTA 60.118 43.478 24.35 5.17 0.00 2.69
6162 6678 3.586470 TGTCCCAAGCTTGTTCCTTAA 57.414 42.857 24.35 1.41 0.00 1.85
6163 6679 3.904717 TGTCCCAAGCTTGTTCCTTAAA 58.095 40.909 24.35 0.00 0.00 1.52
6164 6680 4.479158 TGTCCCAAGCTTGTTCCTTAAAT 58.521 39.130 24.35 0.00 0.00 1.40
6165 6681 4.280677 TGTCCCAAGCTTGTTCCTTAAATG 59.719 41.667 24.35 5.47 0.00 2.32
6166 6682 3.831911 TCCCAAGCTTGTTCCTTAAATGG 59.168 43.478 24.35 14.01 0.00 3.16
6167 6683 3.578282 CCCAAGCTTGTTCCTTAAATGGT 59.422 43.478 24.35 0.00 0.00 3.55
6168 6684 4.040339 CCCAAGCTTGTTCCTTAAATGGTT 59.960 41.667 24.35 0.00 0.00 3.67
6169 6685 4.990426 CCAAGCTTGTTCCTTAAATGGTTG 59.010 41.667 24.35 0.00 0.00 3.77
6170 6686 5.453198 CCAAGCTTGTTCCTTAAATGGTTGT 60.453 40.000 24.35 0.00 31.97 3.32
6171 6687 6.239176 CCAAGCTTGTTCCTTAAATGGTTGTA 60.239 38.462 24.35 0.00 31.97 2.41
6172 6688 7.378181 CAAGCTTGTTCCTTAAATGGTTGTAT 58.622 34.615 18.65 0.00 0.00 2.29
6173 6689 7.158099 AGCTTGTTCCTTAAATGGTTGTATC 57.842 36.000 0.00 0.00 0.00 2.24
6174 6690 6.948309 AGCTTGTTCCTTAAATGGTTGTATCT 59.052 34.615 0.00 0.00 0.00 1.98
6175 6691 8.107095 AGCTTGTTCCTTAAATGGTTGTATCTA 58.893 33.333 0.00 0.00 0.00 1.98
6176 6692 8.398665 GCTTGTTCCTTAAATGGTTGTATCTAG 58.601 37.037 0.00 0.00 0.00 2.43
6177 6693 7.859325 TGTTCCTTAAATGGTTGTATCTAGC 57.141 36.000 0.00 0.00 0.00 3.42
6178 6694 7.398829 TGTTCCTTAAATGGTTGTATCTAGCA 58.601 34.615 0.00 0.00 0.00 3.49
6179 6695 7.335924 TGTTCCTTAAATGGTTGTATCTAGCAC 59.664 37.037 0.00 0.00 0.00 4.40
6180 6696 7.195374 TCCTTAAATGGTTGTATCTAGCACT 57.805 36.000 0.00 0.00 0.00 4.40
6181 6697 8.313944 TCCTTAAATGGTTGTATCTAGCACTA 57.686 34.615 0.00 0.00 0.00 2.74
6182 6698 8.764558 TCCTTAAATGGTTGTATCTAGCACTAA 58.235 33.333 0.00 0.00 0.00 2.24
6183 6699 8.827677 CCTTAAATGGTTGTATCTAGCACTAAC 58.172 37.037 0.00 0.00 0.00 2.34
6184 6700 9.601217 CTTAAATGGTTGTATCTAGCACTAACT 57.399 33.333 0.00 0.00 0.00 2.24
6185 6701 9.953565 TTAAATGGTTGTATCTAGCACTAACTT 57.046 29.630 0.00 0.00 0.00 2.66
6186 6702 7.849804 AATGGTTGTATCTAGCACTAACTTG 57.150 36.000 0.00 0.00 0.00 3.16
6187 6703 5.730550 TGGTTGTATCTAGCACTAACTTGG 58.269 41.667 0.00 0.00 0.00 3.61
6188 6704 5.247564 TGGTTGTATCTAGCACTAACTTGGT 59.752 40.000 0.00 0.00 0.00 3.67
6189 6705 5.581085 GGTTGTATCTAGCACTAACTTGGTG 59.419 44.000 0.97 0.97 37.70 4.17
6201 6717 5.687730 CACTAACTTGGTGCTAGATACATCG 59.312 44.000 0.00 0.00 0.00 3.84
6202 6718 5.593095 ACTAACTTGGTGCTAGATACATCGA 59.407 40.000 0.00 0.00 0.00 3.59
6203 6719 5.537300 AACTTGGTGCTAGATACATCGAT 57.463 39.130 0.00 0.00 0.00 3.59
6204 6720 6.650427 AACTTGGTGCTAGATACATCGATA 57.350 37.500 0.00 0.00 0.00 2.92
6205 6721 6.842437 ACTTGGTGCTAGATACATCGATAT 57.158 37.500 0.00 0.00 0.00 1.63
6206 6722 6.857956 ACTTGGTGCTAGATACATCGATATC 58.142 40.000 0.00 0.00 32.55 1.63
6207 6723 6.434340 ACTTGGTGCTAGATACATCGATATCA 59.566 38.462 10.12 0.00 34.50 2.15
6208 6724 6.834168 TGGTGCTAGATACATCGATATCAA 57.166 37.500 10.12 0.00 34.50 2.57
6209 6725 6.856895 TGGTGCTAGATACATCGATATCAAG 58.143 40.000 10.12 0.00 34.50 3.02
6210 6726 6.127619 TGGTGCTAGATACATCGATATCAAGG 60.128 42.308 10.12 0.00 34.50 3.61
6211 6727 6.095580 GGTGCTAGATACATCGATATCAAGGA 59.904 42.308 10.12 0.00 34.50 3.36
6212 6728 6.970043 GTGCTAGATACATCGATATCAAGGAC 59.030 42.308 10.12 5.96 34.50 3.85
6213 6729 6.659242 TGCTAGATACATCGATATCAAGGACA 59.341 38.462 10.12 0.00 34.50 4.02
6214 6730 7.176690 TGCTAGATACATCGATATCAAGGACAA 59.823 37.037 10.12 0.00 34.50 3.18
6215 6731 8.029522 GCTAGATACATCGATATCAAGGACAAA 58.970 37.037 10.12 0.00 34.50 2.83
6218 6734 9.784531 AGATACATCGATATCAAGGACAAATTT 57.215 29.630 10.12 0.00 34.50 1.82
6222 6738 8.190784 ACATCGATATCAAGGACAAATTTTTCC 58.809 33.333 14.44 14.44 0.00 3.13
6223 6739 6.781138 TCGATATCAAGGACAAATTTTTCCG 58.219 36.000 15.93 5.12 36.95 4.30
6224 6740 5.971202 CGATATCAAGGACAAATTTTTCCGG 59.029 40.000 15.93 12.82 36.95 5.14
6225 6741 6.183360 CGATATCAAGGACAAATTTTTCCGGA 60.183 38.462 15.93 16.79 36.95 5.14
6226 6742 4.577834 TCAAGGACAAATTTTTCCGGAC 57.422 40.909 15.93 0.00 36.95 4.79
6227 6743 3.003897 TCAAGGACAAATTTTTCCGGACG 59.996 43.478 15.93 7.58 36.95 4.79
6228 6744 1.883926 AGGACAAATTTTTCCGGACGG 59.116 47.619 15.93 3.96 36.95 4.79
6229 6745 1.881324 GGACAAATTTTTCCGGACGGA 59.119 47.619 1.83 9.76 43.52 4.69
6230 6746 2.095415 GGACAAATTTTTCCGGACGGAG 60.095 50.000 13.64 3.15 46.06 4.63
6231 6747 1.883926 ACAAATTTTTCCGGACGGAGG 59.116 47.619 13.64 0.00 46.06 4.30
6232 6748 1.201414 CAAATTTTTCCGGACGGAGGG 59.799 52.381 13.64 0.00 46.06 4.30
6233 6749 0.694196 AATTTTTCCGGACGGAGGGA 59.306 50.000 13.64 4.26 46.06 4.20
6234 6750 0.252197 ATTTTTCCGGACGGAGGGAG 59.748 55.000 13.64 0.00 46.06 4.30
6235 6751 1.123246 TTTTTCCGGACGGAGGGAGT 61.123 55.000 13.64 0.00 46.06 3.85
6236 6752 0.251742 TTTTCCGGACGGAGGGAGTA 60.252 55.000 13.64 0.00 46.06 2.59
6237 6753 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
6238 6754 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
6239 6755 0.982852 TCCGGACGGAGGGAGTACTA 60.983 60.000 9.76 0.00 39.76 1.82
6240 6756 0.534652 CCGGACGGAGGGAGTACTAG 60.535 65.000 4.40 0.00 37.50 2.57
6241 6757 0.179936 CGGACGGAGGGAGTACTAGT 59.820 60.000 0.00 0.00 0.00 2.57
6242 6758 1.407989 CGGACGGAGGGAGTACTAGTT 60.408 57.143 0.00 0.00 0.00 2.24
6243 6759 2.158900 CGGACGGAGGGAGTACTAGTTA 60.159 54.545 0.00 0.00 0.00 2.24
6244 6760 3.475575 GGACGGAGGGAGTACTAGTTAG 58.524 54.545 0.00 0.00 0.00 2.34
6245 6761 3.118075 GGACGGAGGGAGTACTAGTTAGT 60.118 52.174 0.00 0.00 40.24 2.24
6246 6762 4.101741 GGACGGAGGGAGTACTAGTTAGTA 59.898 50.000 0.00 0.00 37.73 1.82
6247 6763 5.221823 GGACGGAGGGAGTACTAGTTAGTAT 60.222 48.000 0.00 0.00 40.55 2.12
6248 6764 6.014156 GGACGGAGGGAGTACTAGTTAGTATA 60.014 46.154 0.00 0.00 40.55 1.47
6249 6765 7.380423 ACGGAGGGAGTACTAGTTAGTATAA 57.620 40.000 0.00 0.00 40.55 0.98
6250 6766 7.806180 ACGGAGGGAGTACTAGTTAGTATAAA 58.194 38.462 0.00 0.00 40.55 1.40
6251 6767 7.936301 ACGGAGGGAGTACTAGTTAGTATAAAG 59.064 40.741 0.00 0.00 40.55 1.85
6252 6768 7.936301 CGGAGGGAGTACTAGTTAGTATAAAGT 59.064 40.741 0.00 0.00 40.55 2.66
6253 6769 9.639563 GGAGGGAGTACTAGTTAGTATAAAGTT 57.360 37.037 0.00 0.00 40.55 2.66
6255 6771 9.418839 AGGGAGTACTAGTTAGTATAAAGTTGG 57.581 37.037 0.00 0.00 40.55 3.77
6256 6772 8.637099 GGGAGTACTAGTTAGTATAAAGTTGGG 58.363 40.741 0.00 0.00 40.55 4.12
6257 6773 9.194972 GGAGTACTAGTTAGTATAAAGTTGGGT 57.805 37.037 0.00 0.00 40.55 4.51
6274 6790 8.502105 AAGTTGGGTTATCTATTTTAGAACGG 57.498 34.615 0.00 0.00 38.50 4.44
6275 6791 7.854337 AGTTGGGTTATCTATTTTAGAACGGA 58.146 34.615 0.00 0.00 38.50 4.69
6276 6792 7.985752 AGTTGGGTTATCTATTTTAGAACGGAG 59.014 37.037 0.00 0.00 38.50 4.63
6277 6793 6.823497 TGGGTTATCTATTTTAGAACGGAGG 58.177 40.000 0.00 0.00 38.50 4.30
6278 6794 6.183361 TGGGTTATCTATTTTAGAACGGAGGG 60.183 42.308 0.00 0.00 38.50 4.30
6279 6795 6.042437 GGGTTATCTATTTTAGAACGGAGGGA 59.958 42.308 0.00 0.00 38.50 4.20
6280 6796 7.153315 GGTTATCTATTTTAGAACGGAGGGAG 58.847 42.308 0.00 0.00 38.50 4.30
6281 6797 7.201983 GGTTATCTATTTTAGAACGGAGGGAGT 60.202 40.741 0.00 0.00 38.50 3.85
6282 6798 8.854117 GTTATCTATTTTAGAACGGAGGGAGTA 58.146 37.037 0.00 0.00 38.50 2.59
6283 6799 9.597681 TTATCTATTTTAGAACGGAGGGAGTAT 57.402 33.333 0.00 0.00 38.50 2.12
6284 6800 7.909485 TCTATTTTAGAACGGAGGGAGTATT 57.091 36.000 0.00 0.00 0.00 1.89
6285 6801 8.315220 TCTATTTTAGAACGGAGGGAGTATTT 57.685 34.615 0.00 0.00 0.00 1.40
6286 6802 8.202137 TCTATTTTAGAACGGAGGGAGTATTTG 58.798 37.037 0.00 0.00 0.00 2.32
6287 6803 5.750352 TTTAGAACGGAGGGAGTATTTGT 57.250 39.130 0.00 0.00 0.00 2.83
6288 6804 3.889520 AGAACGGAGGGAGTATTTGTC 57.110 47.619 0.00 0.00 0.00 3.18
6289 6805 3.170717 AGAACGGAGGGAGTATTTGTCA 58.829 45.455 0.00 0.00 0.00 3.58
6290 6806 3.195825 AGAACGGAGGGAGTATTTGTCAG 59.804 47.826 0.00 0.00 0.00 3.51
6291 6807 1.207329 ACGGAGGGAGTATTTGTCAGC 59.793 52.381 0.00 0.00 0.00 4.26
6292 6808 1.482593 CGGAGGGAGTATTTGTCAGCT 59.517 52.381 0.00 0.00 0.00 4.24
6293 6809 2.693591 CGGAGGGAGTATTTGTCAGCTA 59.306 50.000 0.00 0.00 0.00 3.32
6294 6810 3.491104 CGGAGGGAGTATTTGTCAGCTAC 60.491 52.174 0.00 0.00 0.00 3.58
6295 6811 3.707102 GGAGGGAGTATTTGTCAGCTACT 59.293 47.826 0.00 0.00 0.00 2.57
6296 6812 4.202172 GGAGGGAGTATTTGTCAGCTACTC 60.202 50.000 12.31 12.31 40.29 2.59
6300 6816 4.939271 GAGTATTTGTCAGCTACTCCCTC 58.061 47.826 10.62 0.00 36.80 4.30
6301 6817 3.707102 AGTATTTGTCAGCTACTCCCTCC 59.293 47.826 0.00 0.00 0.00 4.30
6302 6818 0.895530 TTTGTCAGCTACTCCCTCCG 59.104 55.000 0.00 0.00 0.00 4.63
6303 6819 0.251653 TTGTCAGCTACTCCCTCCGT 60.252 55.000 0.00 0.00 0.00 4.69
6304 6820 0.251653 TGTCAGCTACTCCCTCCGTT 60.252 55.000 0.00 0.00 0.00 4.44
6305 6821 0.456628 GTCAGCTACTCCCTCCGTTC 59.543 60.000 0.00 0.00 0.00 3.95
6306 6822 0.331954 TCAGCTACTCCCTCCGTTCT 59.668 55.000 0.00 0.00 0.00 3.01
6307 6823 0.457851 CAGCTACTCCCTCCGTTCTG 59.542 60.000 0.00 0.00 0.00 3.02
6308 6824 0.331954 AGCTACTCCCTCCGTTCTGA 59.668 55.000 0.00 0.00 0.00 3.27
6309 6825 1.183549 GCTACTCCCTCCGTTCTGAA 58.816 55.000 0.00 0.00 0.00 3.02
6310 6826 1.757699 GCTACTCCCTCCGTTCTGAAT 59.242 52.381 0.00 0.00 0.00 2.57
6311 6827 2.168728 GCTACTCCCTCCGTTCTGAATT 59.831 50.000 0.00 0.00 0.00 2.17
6312 6828 3.383825 GCTACTCCCTCCGTTCTGAATTA 59.616 47.826 0.00 0.00 0.00 1.40
6313 6829 3.889520 ACTCCCTCCGTTCTGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
6314 6830 3.442076 ACTCCCTCCGTTCTGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
6315 6831 3.447944 ACTCCCTCCGTTCTGAATTACTC 59.552 47.826 0.00 0.00 0.00 2.59
6316 6832 2.426024 TCCCTCCGTTCTGAATTACTCG 59.574 50.000 0.00 0.00 0.00 4.18
6317 6833 2.165845 CCCTCCGTTCTGAATTACTCGT 59.834 50.000 0.00 0.00 0.00 4.18
6318 6834 3.436496 CCTCCGTTCTGAATTACTCGTC 58.564 50.000 0.00 0.00 0.00 4.20
6319 6835 3.436496 CTCCGTTCTGAATTACTCGTCC 58.564 50.000 0.00 0.00 0.00 4.79
6320 6836 2.821378 TCCGTTCTGAATTACTCGTCCA 59.179 45.455 0.00 0.00 0.00 4.02
6321 6837 3.256383 TCCGTTCTGAATTACTCGTCCAA 59.744 43.478 0.00 0.00 0.00 3.53
6322 6838 3.612860 CCGTTCTGAATTACTCGTCCAAG 59.387 47.826 0.00 0.00 0.00 3.61
6323 6839 4.482386 CGTTCTGAATTACTCGTCCAAGA 58.518 43.478 0.00 0.00 0.00 3.02
6324 6840 4.921515 CGTTCTGAATTACTCGTCCAAGAA 59.078 41.667 0.00 0.00 0.00 2.52
6325 6841 5.404366 CGTTCTGAATTACTCGTCCAAGAAA 59.596 40.000 0.00 0.00 0.00 2.52
6326 6842 6.090898 CGTTCTGAATTACTCGTCCAAGAAAT 59.909 38.462 0.00 0.00 0.00 2.17
6327 6843 6.968131 TCTGAATTACTCGTCCAAGAAATG 57.032 37.500 0.00 0.00 0.00 2.32
6328 6844 6.697395 TCTGAATTACTCGTCCAAGAAATGA 58.303 36.000 0.00 0.00 0.00 2.57
6329 6845 7.158697 TCTGAATTACTCGTCCAAGAAATGAA 58.841 34.615 0.00 0.00 0.00 2.57
6330 6846 7.824289 TCTGAATTACTCGTCCAAGAAATGAAT 59.176 33.333 0.00 0.00 0.00 2.57
6331 6847 7.751732 TGAATTACTCGTCCAAGAAATGAATG 58.248 34.615 0.00 0.00 0.00 2.67
6332 6848 7.390440 TGAATTACTCGTCCAAGAAATGAATGT 59.610 33.333 0.00 0.00 0.00 2.71
6333 6849 8.786826 AATTACTCGTCCAAGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
6334 6850 8.964476 ATTACTCGTCCAAGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
6335 6851 6.910536 ACTCGTCCAAGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
6336 6852 6.644347 ACTCGTCCAAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
6337 6853 7.782049 ACTCGTCCAAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
6338 6854 7.923344 ACTCGTCCAAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
6339 6855 8.007405 TCGTCCAAGAAATGAATGTATCTAGA 57.993 34.615 0.00 0.00 0.00 2.43
6340 6856 8.642432 TCGTCCAAGAAATGAATGTATCTAGAT 58.358 33.333 10.73 10.73 0.00 1.98
6341 6857 8.706936 CGTCCAAGAAATGAATGTATCTAGATG 58.293 37.037 15.79 0.00 0.00 2.90
6342 6858 9.553064 GTCCAAGAAATGAATGTATCTAGATGT 57.447 33.333 15.79 0.00 0.00 3.06
6390 6906 9.698309 TTTTTGTGACAAGTAATTTTGAACAGA 57.302 25.926 0.00 0.00 33.32 3.41
6391 6907 8.909708 TTTGTGACAAGTAATTTTGAACAGAG 57.090 30.769 0.00 0.00 33.32 3.35
6392 6908 7.026631 TGTGACAAGTAATTTTGAACAGAGG 57.973 36.000 0.00 0.00 0.00 3.69
6393 6909 6.039270 TGTGACAAGTAATTTTGAACAGAGGG 59.961 38.462 0.00 0.00 0.00 4.30
6394 6910 6.262273 GTGACAAGTAATTTTGAACAGAGGGA 59.738 38.462 0.00 0.00 0.00 4.20
6395 6911 6.486657 TGACAAGTAATTTTGAACAGAGGGAG 59.513 38.462 0.00 0.00 0.00 4.30
6403 6928 7.839680 ATTTTGAACAGAGGGAGTATGTTTT 57.160 32.000 0.00 0.00 40.76 2.43
6423 6948 6.708054 TGTTTTTGTGGTTGTGTTCTTGAATT 59.292 30.769 0.00 0.00 0.00 2.17
6424 6949 6.718454 TTTTGTGGTTGTGTTCTTGAATTG 57.282 33.333 0.00 0.00 0.00 2.32
6504 7029 5.041951 TGCGAAAAACATGTCAGTAATCC 57.958 39.130 0.00 0.00 0.00 3.01
6555 7080 0.538584 TTGCGGATCTGTGCTGAGAT 59.461 50.000 2.89 0.00 35.27 2.75
6566 7091 2.036604 TGTGCTGAGATGTTGAACGGTA 59.963 45.455 0.00 0.00 0.00 4.02
6567 7092 3.064207 GTGCTGAGATGTTGAACGGTAA 58.936 45.455 0.00 0.00 0.00 2.85
6576 7101 7.698970 TGAGATGTTGAACGGTAAAAAGTTTTC 59.301 33.333 0.32 0.00 0.00 2.29
6590 7115 3.230743 AGTTTTCGCACTTGTGCTTTT 57.769 38.095 21.17 1.39 0.00 2.27
6591 7116 4.364415 AGTTTTCGCACTTGTGCTTTTA 57.636 36.364 21.17 4.04 0.00 1.52
6592 7117 4.351192 AGTTTTCGCACTTGTGCTTTTAG 58.649 39.130 21.17 7.54 0.00 1.85
6593 7118 2.399396 TTCGCACTTGTGCTTTTAGC 57.601 45.000 21.17 0.00 42.82 3.09
6630 7192 6.336566 TGCTCTAGTGATGAATGAAGACTTC 58.663 40.000 8.34 8.34 0.00 3.01
6679 7241 1.724582 AAACGGTTGTGCTGCTCCAC 61.725 55.000 0.00 0.00 36.28 4.02
6690 7252 2.302733 TGCTGCTCCACTAATGAAGACA 59.697 45.455 0.00 0.00 0.00 3.41
6700 7262 8.786826 TCCACTAATGAAGACAACGAATAATT 57.213 30.769 0.00 0.00 0.00 1.40
6725 7287 5.576563 TCTGGAGGGTCAACAAATTCTTA 57.423 39.130 0.00 0.00 0.00 2.10
6785 7347 7.259882 TGCATGTAAATCTTCATGGACAATTC 58.740 34.615 7.15 0.00 40.91 2.17
6932 7499 7.633281 GTGTACATCCGTATGTGTTTTTATTCG 59.367 37.037 3.56 0.00 45.99 3.34
6951 7519 9.615295 TTTATTCGGCAAAAGAAAGTTGTATAC 57.385 29.630 0.00 0.00 0.00 1.47
6977 7545 7.743838 CGTTTTTGATCTTCTCAGACATTCTTC 59.256 37.037 0.00 0.00 34.68 2.87
6980 7548 3.876274 TCTTCTCAGACATTCTTCGGG 57.124 47.619 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.282449 TCTTCGTCACTTGTTTATCTCCCA 59.718 41.667 0.00 0.00 0.00 4.37
1 2 4.817517 TCTTCGTCACTTGTTTATCTCCC 58.182 43.478 0.00 0.00 0.00 4.30
8 9 2.540101 CGCTTCTCTTCGTCACTTGTTT 59.460 45.455 0.00 0.00 0.00 2.83
18 19 1.457303 CCTTGTTGTCGCTTCTCTTCG 59.543 52.381 0.00 0.00 0.00 3.79
19 20 1.801178 CCCTTGTTGTCGCTTCTCTTC 59.199 52.381 0.00 0.00 0.00 2.87
29 30 1.966451 CCTCCGTGCCCTTGTTGTC 60.966 63.158 0.00 0.00 0.00 3.18
42 43 3.116300 CGTCTCACATGATTAACCTCCG 58.884 50.000 0.00 0.00 0.00 4.63
44 45 5.972382 GTCTACGTCTCACATGATTAACCTC 59.028 44.000 0.00 0.00 0.00 3.85
47 48 5.647589 TGGTCTACGTCTCACATGATTAAC 58.352 41.667 0.00 0.00 0.00 2.01
51 52 6.465439 TTATTGGTCTACGTCTCACATGAT 57.535 37.500 0.00 0.00 0.00 2.45
102 103 8.147058 AGCATGTCATGGACTTTCTACTATTAG 58.853 37.037 14.64 0.00 33.15 1.73
103 104 8.023021 AGCATGTCATGGACTTTCTACTATTA 57.977 34.615 14.64 0.00 33.15 0.98
138 139 4.717233 TTGAATATGGCCACATTGACAC 57.283 40.909 15.51 0.00 38.53 3.67
157 158 3.474693 TCACATCACGCATGTTGATTG 57.525 42.857 8.71 10.23 43.89 2.67
165 166 4.823442 ACCATTCAATATCACATCACGCAT 59.177 37.500 0.00 0.00 0.00 4.73
169 170 5.294306 ACACGACCATTCAATATCACATCAC 59.706 40.000 0.00 0.00 0.00 3.06
183 388 4.570772 GCTATAACACATCACACGACCATT 59.429 41.667 0.00 0.00 0.00 3.16
187 392 2.534349 CGGCTATAACACATCACACGAC 59.466 50.000 0.00 0.00 0.00 4.34
190 395 2.901249 ACCGGCTATAACACATCACAC 58.099 47.619 0.00 0.00 0.00 3.82
239 444 9.929180 CTTCAATATATCAATCGGAGAAAGGTA 57.071 33.333 0.00 0.00 43.58 3.08
262 467 6.375455 ACCCTATGACATTGTTTCATGTCTTC 59.625 38.462 13.50 0.00 45.35 2.87
281 486 3.846588 CTCATGGTATGGCCTAACCCTAT 59.153 47.826 20.38 8.73 37.83 2.57
335 540 4.571372 ACTAGCAGATTCGTACTTAGCC 57.429 45.455 0.00 0.00 0.00 3.93
393 598 5.402270 GCGAAAATTAAAGCACATTGTGTCT 59.598 36.000 17.64 12.17 35.75 3.41
477 682 8.649973 AGCTAGTGATAGTACAAAAATGCTAC 57.350 34.615 0.00 0.00 0.00 3.58
484 689 9.314321 GCTTGAATAGCTAGTGATAGTACAAAA 57.686 33.333 0.00 0.00 46.77 2.44
512 719 6.071463 GCATACATTCGATAATTGTTCCGTC 58.929 40.000 0.00 0.00 0.00 4.79
526 733 7.509050 TGAAAATTTGTGATGCATACATTCG 57.491 32.000 0.00 0.00 36.35 3.34
591 805 7.982919 ACAAGTTACTGTACAACAATGTCTACA 59.017 33.333 0.00 4.46 41.05 2.74
609 824 5.521544 TCCCGCAACAAAATAACAAGTTAC 58.478 37.500 0.00 0.00 0.00 2.50
613 828 4.237349 ACTCCCGCAACAAAATAACAAG 57.763 40.909 0.00 0.00 0.00 3.16
660 875 8.480501 TCTACTGTAACTGGACTTGTAGTTTTT 58.519 33.333 0.00 0.00 38.11 1.94
673 888 5.068234 TCCGTTGATTCTACTGTAACTGG 57.932 43.478 0.00 0.00 0.00 4.00
674 889 5.950883 TCTCCGTTGATTCTACTGTAACTG 58.049 41.667 0.00 0.00 0.00 3.16
678 920 8.459911 TGATATTCTCCGTTGATTCTACTGTA 57.540 34.615 0.00 0.00 0.00 2.74
699 941 2.378038 GGTTCTTTGCCTGGCATGATA 58.622 47.619 24.03 4.08 38.76 2.15
742 984 6.570692 TCTTTGAGTAGAACGATATCCCAAC 58.429 40.000 0.00 0.00 0.00 3.77
790 1032 6.979817 ACAAGAATACGGCGTAACATATTGTA 59.020 34.615 27.01 7.87 0.00 2.41
797 1039 4.168014 CTGTACAAGAATACGGCGTAACA 58.832 43.478 24.81 19.12 0.00 2.41
816 1058 3.440872 CGCTTCTCTAGTACTCCAACTGT 59.559 47.826 0.00 0.00 0.00 3.55
817 1059 3.690139 TCGCTTCTCTAGTACTCCAACTG 59.310 47.826 0.00 0.00 0.00 3.16
819 1061 4.698583 TTCGCTTCTCTAGTACTCCAAC 57.301 45.455 0.00 0.00 0.00 3.77
822 1064 4.106909 GCTTTTCGCTTCTCTAGTACTCC 58.893 47.826 0.00 0.00 35.14 3.85
823 1065 3.787105 CGCTTTTCGCTTCTCTAGTACTC 59.213 47.826 0.00 0.00 36.13 2.59
824 1066 3.439476 TCGCTTTTCGCTTCTCTAGTACT 59.561 43.478 0.00 0.00 38.27 2.73
825 1067 3.756069 TCGCTTTTCGCTTCTCTAGTAC 58.244 45.455 0.00 0.00 38.27 2.73
826 1068 4.095932 TCATCGCTTTTCGCTTCTCTAGTA 59.904 41.667 0.00 0.00 38.27 1.82
827 1069 3.119459 TCATCGCTTTTCGCTTCTCTAGT 60.119 43.478 0.00 0.00 38.27 2.57
828 1070 3.439293 TCATCGCTTTTCGCTTCTCTAG 58.561 45.455 0.00 0.00 38.27 2.43
927 1206 1.079127 AGTTGGATTGGTCGCGAGG 60.079 57.895 10.24 0.00 0.00 4.63
1010 1289 0.546598 AGCTAGGGTTCGGGGATTTG 59.453 55.000 0.00 0.00 0.00 2.32
1019 1298 1.121378 GTGGGGTAGAGCTAGGGTTC 58.879 60.000 0.00 0.00 0.00 3.62
1459 1738 1.302033 CTCAAGCAAGCGGTCACCT 60.302 57.895 0.00 0.00 0.00 4.00
1495 1774 1.738099 CAGGAAGTCAACCGCCTCG 60.738 63.158 0.00 0.00 0.00 4.63
1603 1882 4.463186 AGGTACACGAAGAGAAGCTTGTAT 59.537 41.667 2.10 0.00 36.83 2.29
2031 2347 4.537135 AGAATCGCAAACTCCTTCTACA 57.463 40.909 0.00 0.00 0.00 2.74
2035 2351 7.425595 CGTAATTAAAGAATCGCAAACTCCTTC 59.574 37.037 0.00 0.00 0.00 3.46
2112 2428 2.529632 ACTCACACAGCCACAGATCTA 58.470 47.619 0.00 0.00 0.00 1.98
2144 2460 0.454600 CAGCACAAGGGCATAGCAAG 59.545 55.000 0.00 0.00 35.83 4.01
2426 2752 7.617041 AAACTGCACTATTTAATCTCACCTC 57.383 36.000 0.00 0.00 0.00 3.85
2645 2971 3.534357 TTGGCTAACAGGAATGGGAAA 57.466 42.857 0.00 0.00 0.00 3.13
2854 3182 5.942872 ACAAAGCAAATTCCTGTATCTTCG 58.057 37.500 0.00 0.00 0.00 3.79
3032 3361 0.311790 CCTGTGAATGTGCGCAAGTT 59.688 50.000 14.00 10.40 41.68 2.66
3167 3496 3.866910 AGACGTTTTTGCAGTCGAACTAA 59.133 39.130 0.00 0.00 39.65 2.24
3168 3497 3.450578 AGACGTTTTTGCAGTCGAACTA 58.549 40.909 0.00 0.00 39.65 2.24
3172 3501 6.715344 AATATAAGACGTTTTTGCAGTCGA 57.285 33.333 0.00 0.00 39.65 4.20
3173 3502 7.201232 CCAAAATATAAGACGTTTTTGCAGTCG 60.201 37.037 13.03 0.00 37.60 4.18
3174 3503 7.593644 ACCAAAATATAAGACGTTTTTGCAGTC 59.406 33.333 13.03 0.00 37.60 3.51
3248 3583 9.691362 ATATAACCAACAATTGACAAGTGAAAC 57.309 29.630 21.51 0.00 0.00 2.78
3463 3941 3.865446 AGTATAGTTTTTCCCGTTCCCG 58.135 45.455 0.00 0.00 0.00 5.14
3479 3957 2.170012 AAGGTCGCCCCTGAAGTATA 57.830 50.000 0.00 0.00 45.47 1.47
3483 3961 3.771577 ATAATAAGGTCGCCCCTGAAG 57.228 47.619 0.00 0.00 45.47 3.02
3511 3989 2.679837 AGGAGCAAGCAACATCATAACG 59.320 45.455 0.00 0.00 0.00 3.18
3586 4064 0.323629 GCTAGTGTGCTTGGTGGGTA 59.676 55.000 0.00 0.00 0.00 3.69
3587 4065 1.073199 GCTAGTGTGCTTGGTGGGT 59.927 57.895 0.00 0.00 0.00 4.51
3622 4100 0.818040 GCGGTAGTGCCTTAATGGGG 60.818 60.000 0.00 0.00 36.00 4.96
3627 4105 3.899052 ACTATTGCGGTAGTGCCTTAA 57.101 42.857 0.00 0.00 33.78 1.85
3725 4203 2.104170 CTTCTCCCTACTCCGCTTCTT 58.896 52.381 0.00 0.00 0.00 2.52
3838 4316 4.598894 CCCCAGATCTGAGCGCCG 62.599 72.222 24.62 5.87 0.00 6.46
3920 4398 1.549203 AAAATCCACCGCTGCTCAAT 58.451 45.000 0.00 0.00 0.00 2.57
3956 4434 1.918293 CACCTGCTCCCTACCCACA 60.918 63.158 0.00 0.00 0.00 4.17
3994 4472 4.660611 TCCACCGGTAAGGCCCCA 62.661 66.667 6.87 0.00 46.52 4.96
4069 4547 4.154942 ACGGAGGAAACCTAACACTCTAA 58.845 43.478 0.00 0.00 31.76 2.10
4162 4640 3.345508 ACCCCTTGAAAAGTATCGGAC 57.654 47.619 0.00 0.00 44.25 4.79
4163 4641 4.102054 GGATACCCCTTGAAAAGTATCGGA 59.898 45.833 0.00 0.00 44.25 4.55
4171 4649 1.065998 CGTCCGGATACCCCTTGAAAA 60.066 52.381 7.81 0.00 0.00 2.29
4289 4769 7.763985 TGGTACTATCACACATGATGTACAAAG 59.236 37.037 19.71 0.00 45.54 2.77
4358 4838 7.318141 CCAAGATGCATCATTTCACTTTACTT 58.682 34.615 27.81 6.33 0.00 2.24
4734 5218 7.923878 ACCGAAGCACAAACAATAAAAACTATT 59.076 29.630 0.00 0.00 0.00 1.73
4757 5241 7.013464 AGACAGGAATAGATACTTCTACAACCG 59.987 40.741 0.00 0.00 37.28 4.44
4852 5338 5.452255 ACAAATGTGATCCTTATGAGGCAT 58.548 37.500 0.00 0.00 43.21 4.40
4884 5370 2.156310 CACCTTAAACGACGCACTTACC 59.844 50.000 0.00 0.00 0.00 2.85
4955 5441 4.928661 ATCAGTGCTACATGAAAACGTC 57.071 40.909 0.00 0.00 0.00 4.34
4957 5443 7.962373 TGATTAAATCAGTGCTACATGAAAACG 59.038 33.333 0.00 0.00 33.59 3.60
5178 5665 3.185455 AGTAATGTCAGGCCCTTTCTCT 58.815 45.455 0.00 0.00 0.00 3.10
5194 5681 6.793349 AGAGCGTTAAACATACTCGAGTAAT 58.207 36.000 27.90 16.79 33.76 1.89
5377 5865 0.182775 GCATTATGGAACGGAGGGGT 59.817 55.000 0.00 0.00 0.00 4.95
5395 5883 3.955771 TGAACTAAAACCACGACAAGC 57.044 42.857 0.00 0.00 0.00 4.01
5965 6481 4.481368 ACGGAAGTCAAGTATATTGCCA 57.519 40.909 0.00 0.00 44.19 4.92
6058 6574 6.555463 TTTAGTTCGGAGGGAGTATGAAAT 57.445 37.500 0.00 0.00 0.00 2.17
6068 6584 5.298347 GGTCATCTATTTTAGTTCGGAGGG 58.702 45.833 0.00 0.00 0.00 4.30
6069 6585 5.163343 TGGGTCATCTATTTTAGTTCGGAGG 60.163 44.000 0.00 0.00 0.00 4.30
6070 6586 5.914033 TGGGTCATCTATTTTAGTTCGGAG 58.086 41.667 0.00 0.00 0.00 4.63
6072 6588 6.113411 AGTTGGGTCATCTATTTTAGTTCGG 58.887 40.000 0.00 0.00 0.00 4.30
6073 6589 7.611213 AAGTTGGGTCATCTATTTTAGTTCG 57.389 36.000 0.00 0.00 0.00 3.95
6079 6595 9.990868 AAGGTATAAAGTTGGGTCATCTATTTT 57.009 29.630 0.00 0.00 0.00 1.82
6080 6596 9.990868 AAAGGTATAAAGTTGGGTCATCTATTT 57.009 29.630 0.00 0.00 0.00 1.40
6100 6616 9.774071 AGGGAGTACAAAGTTAGTATAAAGGTA 57.226 33.333 0.00 0.00 0.00 3.08
6101 6617 8.676397 AGGGAGTACAAAGTTAGTATAAAGGT 57.324 34.615 0.00 0.00 0.00 3.50
6102 6618 9.597170 GAAGGGAGTACAAAGTTAGTATAAAGG 57.403 37.037 0.00 0.00 0.00 3.11
6103 6619 9.298774 CGAAGGGAGTACAAAGTTAGTATAAAG 57.701 37.037 0.00 0.00 0.00 1.85
6104 6620 8.806146 ACGAAGGGAGTACAAAGTTAGTATAAA 58.194 33.333 0.00 0.00 0.00 1.40
6105 6621 8.353423 ACGAAGGGAGTACAAAGTTAGTATAA 57.647 34.615 0.00 0.00 0.00 0.98
6106 6622 7.067494 GGACGAAGGGAGTACAAAGTTAGTATA 59.933 40.741 0.00 0.00 0.00 1.47
6107 6623 6.127507 GGACGAAGGGAGTACAAAGTTAGTAT 60.128 42.308 0.00 0.00 0.00 2.12
6108 6624 5.183904 GGACGAAGGGAGTACAAAGTTAGTA 59.816 44.000 0.00 0.00 0.00 1.82
6109 6625 4.021632 GGACGAAGGGAGTACAAAGTTAGT 60.022 45.833 0.00 0.00 0.00 2.24
6110 6626 4.492611 GGACGAAGGGAGTACAAAGTTAG 58.507 47.826 0.00 0.00 0.00 2.34
6111 6627 3.057315 CGGACGAAGGGAGTACAAAGTTA 60.057 47.826 0.00 0.00 0.00 2.24
6112 6628 2.288640 CGGACGAAGGGAGTACAAAGTT 60.289 50.000 0.00 0.00 0.00 2.66
6113 6629 1.271656 CGGACGAAGGGAGTACAAAGT 59.728 52.381 0.00 0.00 0.00 2.66
6114 6630 1.403780 CCGGACGAAGGGAGTACAAAG 60.404 57.143 0.00 0.00 0.00 2.77
6115 6631 0.604578 CCGGACGAAGGGAGTACAAA 59.395 55.000 0.00 0.00 0.00 2.83
6116 6632 0.251297 TCCGGACGAAGGGAGTACAA 60.251 55.000 0.00 0.00 0.00 2.41
6117 6633 0.251297 TTCCGGACGAAGGGAGTACA 60.251 55.000 1.83 0.00 33.01 2.90
6118 6634 0.890683 TTTCCGGACGAAGGGAGTAC 59.109 55.000 1.83 0.00 33.01 2.73
6119 6635 1.631405 TTTTCCGGACGAAGGGAGTA 58.369 50.000 1.83 0.00 33.01 2.59
6120 6636 0.760572 TTTTTCCGGACGAAGGGAGT 59.239 50.000 1.83 0.00 33.01 3.85
6121 6637 1.154197 GTTTTTCCGGACGAAGGGAG 58.846 55.000 1.83 0.00 33.01 4.30
6122 6638 0.760572 AGTTTTTCCGGACGAAGGGA 59.239 50.000 1.83 0.00 0.00 4.20
6123 6639 1.265905 CAAGTTTTTCCGGACGAAGGG 59.734 52.381 1.83 0.00 0.00 3.95
6124 6640 1.944709 ACAAGTTTTTCCGGACGAAGG 59.055 47.619 1.83 0.00 0.00 3.46
6125 6641 2.032290 GGACAAGTTTTTCCGGACGAAG 60.032 50.000 1.83 0.00 0.00 3.79
6126 6642 1.941975 GGACAAGTTTTTCCGGACGAA 59.058 47.619 1.83 0.00 0.00 3.85
6127 6643 1.585297 GGACAAGTTTTTCCGGACGA 58.415 50.000 1.83 0.00 0.00 4.20
6128 6644 0.589708 GGGACAAGTTTTTCCGGACG 59.410 55.000 1.83 0.00 32.00 4.79
6129 6645 1.682740 TGGGACAAGTTTTTCCGGAC 58.317 50.000 1.83 0.00 31.92 4.79
6142 6658 3.586470 TTAAGGAACAAGCTTGGGACA 57.414 42.857 29.18 7.44 0.00 4.02
6143 6659 4.321974 CCATTTAAGGAACAAGCTTGGGAC 60.322 45.833 29.18 17.88 0.00 4.46
6144 6660 3.831911 CCATTTAAGGAACAAGCTTGGGA 59.168 43.478 29.18 5.84 0.00 4.37
6145 6661 3.578282 ACCATTTAAGGAACAAGCTTGGG 59.422 43.478 29.18 18.15 0.00 4.12
6146 6662 4.871933 ACCATTTAAGGAACAAGCTTGG 57.128 40.909 29.18 11.05 0.00 3.61
6147 6663 5.600696 ACAACCATTTAAGGAACAAGCTTG 58.399 37.500 24.84 24.84 0.00 4.01
6148 6664 5.869649 ACAACCATTTAAGGAACAAGCTT 57.130 34.783 0.00 0.00 0.00 3.74
6149 6665 6.948309 AGATACAACCATTTAAGGAACAAGCT 59.052 34.615 0.00 0.00 0.00 3.74
6150 6666 7.158099 AGATACAACCATTTAAGGAACAAGC 57.842 36.000 0.00 0.00 0.00 4.01
6151 6667 8.398665 GCTAGATACAACCATTTAAGGAACAAG 58.601 37.037 0.00 0.00 0.00 3.16
6152 6668 7.885922 TGCTAGATACAACCATTTAAGGAACAA 59.114 33.333 0.00 0.00 0.00 2.83
6153 6669 7.335924 GTGCTAGATACAACCATTTAAGGAACA 59.664 37.037 0.00 0.00 0.00 3.18
6154 6670 7.553044 AGTGCTAGATACAACCATTTAAGGAAC 59.447 37.037 0.00 0.00 0.00 3.62
6155 6671 7.630082 AGTGCTAGATACAACCATTTAAGGAA 58.370 34.615 0.00 0.00 0.00 3.36
6156 6672 7.195374 AGTGCTAGATACAACCATTTAAGGA 57.805 36.000 0.00 0.00 0.00 3.36
6157 6673 8.827677 GTTAGTGCTAGATACAACCATTTAAGG 58.172 37.037 0.00 0.00 0.00 2.69
6158 6674 9.601217 AGTTAGTGCTAGATACAACCATTTAAG 57.399 33.333 0.00 0.00 0.00 1.85
6159 6675 9.953565 AAGTTAGTGCTAGATACAACCATTTAA 57.046 29.630 0.00 0.00 0.00 1.52
6160 6676 9.378551 CAAGTTAGTGCTAGATACAACCATTTA 57.621 33.333 0.00 0.00 0.00 1.40
6161 6677 7.336931 CCAAGTTAGTGCTAGATACAACCATTT 59.663 37.037 0.00 0.00 0.00 2.32
6162 6678 6.823689 CCAAGTTAGTGCTAGATACAACCATT 59.176 38.462 0.00 0.00 0.00 3.16
6163 6679 6.070194 ACCAAGTTAGTGCTAGATACAACCAT 60.070 38.462 0.00 0.00 0.00 3.55
6164 6680 5.247564 ACCAAGTTAGTGCTAGATACAACCA 59.752 40.000 0.00 0.00 0.00 3.67
6165 6681 5.581085 CACCAAGTTAGTGCTAGATACAACC 59.419 44.000 0.00 0.00 0.00 3.77
6166 6682 6.648725 CACCAAGTTAGTGCTAGATACAAC 57.351 41.667 0.00 0.35 0.00 3.32
6177 6693 5.687730 CGATGTATCTAGCACCAAGTTAGTG 59.312 44.000 0.00 0.00 38.30 2.74
6178 6694 5.593095 TCGATGTATCTAGCACCAAGTTAGT 59.407 40.000 0.00 0.00 33.25 2.24
6179 6695 6.073327 TCGATGTATCTAGCACCAAGTTAG 57.927 41.667 0.00 0.00 32.79 2.34
6180 6696 6.650427 ATCGATGTATCTAGCACCAAGTTA 57.350 37.500 0.00 0.00 0.00 2.24
6181 6697 5.537300 ATCGATGTATCTAGCACCAAGTT 57.463 39.130 0.00 0.00 0.00 2.66
6182 6698 6.434340 TGATATCGATGTATCTAGCACCAAGT 59.566 38.462 8.54 0.00 33.26 3.16
6183 6699 6.856895 TGATATCGATGTATCTAGCACCAAG 58.143 40.000 8.54 0.00 33.26 3.61
6184 6700 6.834168 TGATATCGATGTATCTAGCACCAA 57.166 37.500 8.54 0.00 33.26 3.67
6185 6701 6.127619 CCTTGATATCGATGTATCTAGCACCA 60.128 42.308 8.54 0.00 34.61 4.17
6186 6702 6.095580 TCCTTGATATCGATGTATCTAGCACC 59.904 42.308 8.54 0.00 34.61 5.01
6187 6703 6.970043 GTCCTTGATATCGATGTATCTAGCAC 59.030 42.308 8.54 3.29 34.61 4.40
6188 6704 6.659242 TGTCCTTGATATCGATGTATCTAGCA 59.341 38.462 8.54 2.74 34.61 3.49
6189 6705 7.089770 TGTCCTTGATATCGATGTATCTAGC 57.910 40.000 8.54 0.35 34.61 3.42
6192 6708 9.784531 AAATTTGTCCTTGATATCGATGTATCT 57.215 29.630 8.54 0.00 33.26 1.98
6196 6712 8.190784 GGAAAAATTTGTCCTTGATATCGATGT 58.809 33.333 18.79 0.00 0.00 3.06
6197 6713 7.376866 CGGAAAAATTTGTCCTTGATATCGATG 59.623 37.037 22.46 1.76 0.00 3.84
6198 6714 7.417612 CGGAAAAATTTGTCCTTGATATCGAT 58.582 34.615 22.46 2.16 0.00 3.59
6199 6715 6.183360 CCGGAAAAATTTGTCCTTGATATCGA 60.183 38.462 22.46 0.00 0.00 3.59
6200 6716 5.971202 CCGGAAAAATTTGTCCTTGATATCG 59.029 40.000 22.46 8.64 0.00 2.92
6201 6717 6.972901 GTCCGGAAAAATTTGTCCTTGATATC 59.027 38.462 22.46 6.52 0.00 1.63
6202 6718 6.404293 CGTCCGGAAAAATTTGTCCTTGATAT 60.404 38.462 22.46 0.00 0.00 1.63
6203 6719 5.106475 CGTCCGGAAAAATTTGTCCTTGATA 60.106 40.000 22.46 3.54 0.00 2.15
6204 6720 4.320935 CGTCCGGAAAAATTTGTCCTTGAT 60.321 41.667 22.46 0.00 0.00 2.57
6205 6721 3.003897 CGTCCGGAAAAATTTGTCCTTGA 59.996 43.478 22.46 16.26 0.00 3.02
6206 6722 3.305110 CGTCCGGAAAAATTTGTCCTTG 58.695 45.455 22.46 14.49 0.00 3.61
6207 6723 2.295070 CCGTCCGGAAAAATTTGTCCTT 59.705 45.455 22.46 0.00 37.50 3.36
6208 6724 1.883926 CCGTCCGGAAAAATTTGTCCT 59.116 47.619 22.46 0.00 37.50 3.85
6209 6725 1.881324 TCCGTCCGGAAAAATTTGTCC 59.119 47.619 16.49 16.49 42.05 4.02
6210 6726 2.095415 CCTCCGTCCGGAAAAATTTGTC 60.095 50.000 5.23 0.00 44.66 3.18
6211 6727 1.883926 CCTCCGTCCGGAAAAATTTGT 59.116 47.619 5.23 0.00 44.66 2.83
6212 6728 1.201414 CCCTCCGTCCGGAAAAATTTG 59.799 52.381 5.23 0.00 44.66 2.32
6213 6729 1.074244 TCCCTCCGTCCGGAAAAATTT 59.926 47.619 5.23 0.00 44.66 1.82
6214 6730 0.694196 TCCCTCCGTCCGGAAAAATT 59.306 50.000 5.23 0.00 44.66 1.82
6215 6731 0.252197 CTCCCTCCGTCCGGAAAAAT 59.748 55.000 5.23 0.00 44.66 1.82
6216 6732 1.123246 ACTCCCTCCGTCCGGAAAAA 61.123 55.000 5.23 0.00 44.66 1.94
6217 6733 0.251742 TACTCCCTCCGTCCGGAAAA 60.252 55.000 5.23 0.00 44.66 2.29
6218 6734 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
6219 6735 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
6220 6736 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
6221 6737 0.534652 CTAGTACTCCCTCCGTCCGG 60.535 65.000 0.00 0.00 0.00 5.14
6222 6738 0.179936 ACTAGTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
6223 6739 2.433662 AACTAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
6224 6740 4.149511 ACTAACTAGTACTCCCTCCGTC 57.850 50.000 0.00 0.00 34.13 4.79
6225 6741 5.903198 ATACTAACTAGTACTCCCTCCGT 57.097 43.478 0.00 0.00 41.18 4.69
6226 6742 7.936301 ACTTTATACTAACTAGTACTCCCTCCG 59.064 40.741 0.00 0.00 41.18 4.63
6227 6743 9.639563 AACTTTATACTAACTAGTACTCCCTCC 57.360 37.037 0.00 0.00 41.18 4.30
6229 6745 9.418839 CCAACTTTATACTAACTAGTACTCCCT 57.581 37.037 0.00 0.00 41.18 4.20
6230 6746 8.637099 CCCAACTTTATACTAACTAGTACTCCC 58.363 40.741 0.00 0.00 41.18 4.30
6231 6747 9.194972 ACCCAACTTTATACTAACTAGTACTCC 57.805 37.037 0.00 0.00 41.18 3.85
6248 6764 8.953313 CCGTTCTAAAATAGATAACCCAACTTT 58.047 33.333 0.00 0.00 34.22 2.66
6249 6765 8.323567 TCCGTTCTAAAATAGATAACCCAACTT 58.676 33.333 0.00 0.00 34.22 2.66
6250 6766 7.854337 TCCGTTCTAAAATAGATAACCCAACT 58.146 34.615 0.00 0.00 34.22 3.16
6251 6767 7.226128 CCTCCGTTCTAAAATAGATAACCCAAC 59.774 40.741 0.00 0.00 34.22 3.77
6252 6768 7.277396 CCTCCGTTCTAAAATAGATAACCCAA 58.723 38.462 0.00 0.00 34.22 4.12
6253 6769 6.183361 CCCTCCGTTCTAAAATAGATAACCCA 60.183 42.308 0.00 0.00 34.22 4.51
6254 6770 6.042437 TCCCTCCGTTCTAAAATAGATAACCC 59.958 42.308 0.00 0.00 34.22 4.11
6255 6771 7.059202 TCCCTCCGTTCTAAAATAGATAACC 57.941 40.000 0.00 0.00 34.22 2.85
6256 6772 7.724287 ACTCCCTCCGTTCTAAAATAGATAAC 58.276 38.462 0.00 0.00 34.22 1.89
6257 6773 7.909485 ACTCCCTCCGTTCTAAAATAGATAA 57.091 36.000 0.00 0.00 34.22 1.75
6258 6774 9.597681 AATACTCCCTCCGTTCTAAAATAGATA 57.402 33.333 0.00 0.00 34.22 1.98
6259 6775 8.493787 AATACTCCCTCCGTTCTAAAATAGAT 57.506 34.615 0.00 0.00 34.22 1.98
6260 6776 7.909485 AATACTCCCTCCGTTCTAAAATAGA 57.091 36.000 0.00 0.00 0.00 1.98
6261 6777 7.985752 ACAAATACTCCCTCCGTTCTAAAATAG 59.014 37.037 0.00 0.00 0.00 1.73
6262 6778 7.854337 ACAAATACTCCCTCCGTTCTAAAATA 58.146 34.615 0.00 0.00 0.00 1.40
6263 6779 6.718294 ACAAATACTCCCTCCGTTCTAAAAT 58.282 36.000 0.00 0.00 0.00 1.82
6264 6780 6.117975 ACAAATACTCCCTCCGTTCTAAAA 57.882 37.500 0.00 0.00 0.00 1.52
6265 6781 5.246656 TGACAAATACTCCCTCCGTTCTAAA 59.753 40.000 0.00 0.00 0.00 1.85
6266 6782 4.773674 TGACAAATACTCCCTCCGTTCTAA 59.226 41.667 0.00 0.00 0.00 2.10
6267 6783 4.346730 TGACAAATACTCCCTCCGTTCTA 58.653 43.478 0.00 0.00 0.00 2.10
6268 6784 3.170717 TGACAAATACTCCCTCCGTTCT 58.829 45.455 0.00 0.00 0.00 3.01
6269 6785 3.522553 CTGACAAATACTCCCTCCGTTC 58.477 50.000 0.00 0.00 0.00 3.95
6270 6786 2.354805 GCTGACAAATACTCCCTCCGTT 60.355 50.000 0.00 0.00 0.00 4.44
6271 6787 1.207329 GCTGACAAATACTCCCTCCGT 59.793 52.381 0.00 0.00 0.00 4.69
6272 6788 1.482593 AGCTGACAAATACTCCCTCCG 59.517 52.381 0.00 0.00 0.00 4.63
6273 6789 3.707102 AGTAGCTGACAAATACTCCCTCC 59.293 47.826 0.00 0.00 0.00 4.30
6274 6790 4.939271 GAGTAGCTGACAAATACTCCCTC 58.061 47.826 12.63 0.00 39.56 4.30
6278 6794 4.202172 GGAGGGAGTAGCTGACAAATACTC 60.202 50.000 14.33 14.33 43.00 2.59
6279 6795 3.707102 GGAGGGAGTAGCTGACAAATACT 59.293 47.826 0.00 0.00 32.53 2.12
6280 6796 3.491104 CGGAGGGAGTAGCTGACAAATAC 60.491 52.174 0.00 0.00 0.00 1.89
6281 6797 2.693591 CGGAGGGAGTAGCTGACAAATA 59.306 50.000 0.00 0.00 0.00 1.40
6282 6798 1.482593 CGGAGGGAGTAGCTGACAAAT 59.517 52.381 0.00 0.00 0.00 2.32
6283 6799 0.895530 CGGAGGGAGTAGCTGACAAA 59.104 55.000 0.00 0.00 0.00 2.83
6284 6800 0.251653 ACGGAGGGAGTAGCTGACAA 60.252 55.000 0.00 0.00 0.00 3.18
6285 6801 0.251653 AACGGAGGGAGTAGCTGACA 60.252 55.000 0.00 0.00 0.00 3.58
6286 6802 0.456628 GAACGGAGGGAGTAGCTGAC 59.543 60.000 0.00 0.00 0.00 3.51
6287 6803 0.331954 AGAACGGAGGGAGTAGCTGA 59.668 55.000 0.00 0.00 0.00 4.26
6288 6804 0.457851 CAGAACGGAGGGAGTAGCTG 59.542 60.000 0.00 0.00 0.00 4.24
6289 6805 0.331954 TCAGAACGGAGGGAGTAGCT 59.668 55.000 0.00 0.00 0.00 3.32
6290 6806 1.183549 TTCAGAACGGAGGGAGTAGC 58.816 55.000 0.00 0.00 0.00 3.58
6291 6807 4.645588 AGTAATTCAGAACGGAGGGAGTAG 59.354 45.833 0.00 0.00 0.00 2.57
6292 6808 4.607239 AGTAATTCAGAACGGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
6293 6809 3.442076 AGTAATTCAGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
6294 6810 3.489398 CGAGTAATTCAGAACGGAGGGAG 60.489 52.174 0.00 0.00 0.00 4.30
6295 6811 2.426024 CGAGTAATTCAGAACGGAGGGA 59.574 50.000 0.00 0.00 0.00 4.20
6296 6812 2.165845 ACGAGTAATTCAGAACGGAGGG 59.834 50.000 0.00 0.00 0.00 4.30
6297 6813 3.436496 GACGAGTAATTCAGAACGGAGG 58.564 50.000 0.00 0.00 0.00 4.30
6298 6814 3.119602 TGGACGAGTAATTCAGAACGGAG 60.120 47.826 0.00 0.00 0.00 4.63
6299 6815 2.821378 TGGACGAGTAATTCAGAACGGA 59.179 45.455 0.00 0.00 0.00 4.69
6300 6816 3.226346 TGGACGAGTAATTCAGAACGG 57.774 47.619 0.00 0.00 0.00 4.44
6301 6817 4.482386 TCTTGGACGAGTAATTCAGAACG 58.518 43.478 0.00 0.00 0.00 3.95
6302 6818 6.780706 TTTCTTGGACGAGTAATTCAGAAC 57.219 37.500 0.00 0.00 0.00 3.01
6303 6819 7.158697 TCATTTCTTGGACGAGTAATTCAGAA 58.841 34.615 0.00 0.00 0.00 3.02
6304 6820 6.697395 TCATTTCTTGGACGAGTAATTCAGA 58.303 36.000 0.00 0.00 0.00 3.27
6305 6821 6.968131 TCATTTCTTGGACGAGTAATTCAG 57.032 37.500 0.00 0.00 0.00 3.02
6306 6822 7.390440 ACATTCATTTCTTGGACGAGTAATTCA 59.610 33.333 0.00 0.00 0.00 2.57
6307 6823 7.752695 ACATTCATTTCTTGGACGAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
6308 6824 7.687941 ACATTCATTTCTTGGACGAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
6309 6825 8.964476 ATACATTCATTTCTTGGACGAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
6310 6826 8.258007 AGATACATTCATTTCTTGGACGAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
6311 6827 7.782049 AGATACATTCATTTCTTGGACGAGTA 58.218 34.615 0.00 0.00 0.00 2.59
6312 6828 6.644347 AGATACATTCATTTCTTGGACGAGT 58.356 36.000 0.00 0.00 0.00 4.18
6313 6829 8.138074 TCTAGATACATTCATTTCTTGGACGAG 58.862 37.037 0.00 0.00 0.00 4.18
6314 6830 8.007405 TCTAGATACATTCATTTCTTGGACGA 57.993 34.615 0.00 0.00 0.00 4.20
6315 6831 8.706936 CATCTAGATACATTCATTTCTTGGACG 58.293 37.037 4.54 0.00 0.00 4.79
6316 6832 9.553064 ACATCTAGATACATTCATTTCTTGGAC 57.447 33.333 4.54 0.00 0.00 4.02
6364 6880 9.698309 TCTGTTCAAAATTACTTGTCACAAAAA 57.302 25.926 0.00 0.00 0.00 1.94
6365 6881 9.352784 CTCTGTTCAAAATTACTTGTCACAAAA 57.647 29.630 0.00 0.00 0.00 2.44
6366 6882 7.973388 CCTCTGTTCAAAATTACTTGTCACAAA 59.027 33.333 0.00 0.00 0.00 2.83
6367 6883 7.416213 CCCTCTGTTCAAAATTACTTGTCACAA 60.416 37.037 0.00 0.00 0.00 3.33
6368 6884 6.039270 CCCTCTGTTCAAAATTACTTGTCACA 59.961 38.462 0.00 0.00 0.00 3.58
6369 6885 6.262273 TCCCTCTGTTCAAAATTACTTGTCAC 59.738 38.462 0.00 0.00 0.00 3.67
6370 6886 6.361433 TCCCTCTGTTCAAAATTACTTGTCA 58.639 36.000 0.00 0.00 0.00 3.58
6371 6887 6.486993 ACTCCCTCTGTTCAAAATTACTTGTC 59.513 38.462 0.00 0.00 0.00 3.18
6372 6888 6.365520 ACTCCCTCTGTTCAAAATTACTTGT 58.634 36.000 0.00 0.00 0.00 3.16
6373 6889 6.884280 ACTCCCTCTGTTCAAAATTACTTG 57.116 37.500 0.00 0.00 0.00 3.16
6374 6890 8.164070 ACATACTCCCTCTGTTCAAAATTACTT 58.836 33.333 0.00 0.00 0.00 2.24
6375 6891 7.690256 ACATACTCCCTCTGTTCAAAATTACT 58.310 34.615 0.00 0.00 0.00 2.24
6376 6892 7.923414 ACATACTCCCTCTGTTCAAAATTAC 57.077 36.000 0.00 0.00 0.00 1.89
6377 6893 8.934023 AAACATACTCCCTCTGTTCAAAATTA 57.066 30.769 0.00 0.00 32.18 1.40
6378 6894 7.839680 AAACATACTCCCTCTGTTCAAAATT 57.160 32.000 0.00 0.00 32.18 1.82
6379 6895 7.839680 AAAACATACTCCCTCTGTTCAAAAT 57.160 32.000 0.00 0.00 32.18 1.82
6380 6896 7.123547 ACAAAAACATACTCCCTCTGTTCAAAA 59.876 33.333 0.00 0.00 32.18 2.44
6381 6897 6.605594 ACAAAAACATACTCCCTCTGTTCAAA 59.394 34.615 0.00 0.00 32.18 2.69
6382 6898 6.039270 CACAAAAACATACTCCCTCTGTTCAA 59.961 38.462 0.00 0.00 32.18 2.69
6383 6899 5.530915 CACAAAAACATACTCCCTCTGTTCA 59.469 40.000 0.00 0.00 32.18 3.18
6384 6900 5.048713 CCACAAAAACATACTCCCTCTGTTC 60.049 44.000 0.00 0.00 32.18 3.18
6385 6901 4.827284 CCACAAAAACATACTCCCTCTGTT 59.173 41.667 0.00 0.00 34.71 3.16
6386 6902 4.141251 ACCACAAAAACATACTCCCTCTGT 60.141 41.667 0.00 0.00 0.00 3.41
6387 6903 4.398319 ACCACAAAAACATACTCCCTCTG 58.602 43.478 0.00 0.00 0.00 3.35
6388 6904 4.724279 ACCACAAAAACATACTCCCTCT 57.276 40.909 0.00 0.00 0.00 3.69
6389 6905 4.583073 ACAACCACAAAAACATACTCCCTC 59.417 41.667 0.00 0.00 0.00 4.30
6390 6906 4.340950 CACAACCACAAAAACATACTCCCT 59.659 41.667 0.00 0.00 0.00 4.20
6391 6907 4.098807 ACACAACCACAAAAACATACTCCC 59.901 41.667 0.00 0.00 0.00 4.30
6392 6908 5.257082 ACACAACCACAAAAACATACTCC 57.743 39.130 0.00 0.00 0.00 3.85
6393 6909 6.560711 AGAACACAACCACAAAAACATACTC 58.439 36.000 0.00 0.00 0.00 2.59
6394 6910 6.524101 AGAACACAACCACAAAAACATACT 57.476 33.333 0.00 0.00 0.00 2.12
6395 6911 6.809196 TCAAGAACACAACCACAAAAACATAC 59.191 34.615 0.00 0.00 0.00 2.39
6403 6928 4.180057 GCAATTCAAGAACACAACCACAA 58.820 39.130 0.00 0.00 0.00 3.33
6475 7000 5.163602 ACTGACATGTTTTTCGCAAGGTTTA 60.164 36.000 0.00 0.00 38.47 2.01
6504 7029 5.396484 ACAAAATCACAAATCTCATCGCTG 58.604 37.500 0.00 0.00 0.00 5.18
6555 7080 4.558080 GCGAAAACTTTTTACCGTTCAACA 59.442 37.500 0.00 0.00 0.00 3.33
6592 7117 1.658409 GAGCAGCACAACCGTTTGC 60.658 57.895 0.00 9.20 36.00 3.68
6593 7118 1.195448 CTAGAGCAGCACAACCGTTTG 59.805 52.381 0.00 0.00 38.83 2.93
6690 7252 5.104527 TGACCCTCCAGATGAATTATTCGTT 60.105 40.000 0.88 0.00 0.00 3.85
6700 7262 4.043310 AGAATTTGTTGACCCTCCAGATGA 59.957 41.667 0.00 0.00 0.00 2.92
6779 7341 2.607771 GCATTGGACGCAACAGAATTGT 60.608 45.455 0.00 0.00 39.87 2.71
6913 7480 4.001652 TGCCGAATAAAAACACATACGGA 58.998 39.130 0.00 0.00 41.30 4.69
6920 7487 7.229228 ACTTTCTTTTGCCGAATAAAAACAC 57.771 32.000 0.00 0.00 0.00 3.32
6932 7499 7.688478 AAAACGTATACAACTTTCTTTTGCC 57.312 32.000 3.32 0.00 0.00 4.52
6951 7519 7.126726 AGAATGTCTGAGAAGATCAAAAACG 57.873 36.000 0.00 0.00 37.52 3.60
6960 7528 2.497675 CCCCGAAGAATGTCTGAGAAGA 59.502 50.000 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.