Multiple sequence alignment - TraesCS1B01G197300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G197300 chr1B 100.000 9946 0 0 1 9946 354931168 354921223 0.000000e+00 18367.0
1 TraesCS1B01G197300 chr1B 86.448 915 73 25 2 881 667550642 667549744 0.000000e+00 955.0
2 TraesCS1B01G197300 chr1B 92.354 497 36 1 883 1379 355085732 355085238 0.000000e+00 706.0
3 TraesCS1B01G197300 chr1B 81.515 660 105 13 978 1634 355107511 355106866 2.460000e-145 527.0
4 TraesCS1B01G197300 chr1B 81.203 665 113 5 978 1634 354989264 354988604 8.850000e-145 525.0
5 TraesCS1B01G197300 chr1B 78.886 772 122 27 4891 5645 355105328 355104581 1.500000e-132 484.0
6 TraesCS1B01G197300 chr1B 84.244 311 44 5 5350 5657 354984741 354984433 2.100000e-76 298.0
7 TraesCS1B01G197300 chr1B 78.958 499 55 23 6467 6952 629480882 629481343 2.720000e-75 294.0
8 TraesCS1B01G197300 chr1B 87.446 231 21 8 5800 6028 374010380 374010156 9.910000e-65 259.0
9 TraesCS1B01G197300 chr1B 76.659 437 59 19 8530 8948 355103861 355103450 1.690000e-47 202.0
10 TraesCS1B01G197300 chr1B 96.667 120 3 1 2898 3016 354928213 354928094 2.190000e-46 198.0
11 TraesCS1B01G197300 chr1B 96.667 120 3 1 2956 3075 354928271 354928153 2.190000e-46 198.0
12 TraesCS1B01G197300 chr1B 87.273 110 14 0 8530 8639 354983566 354983457 1.050000e-24 126.0
13 TraesCS1B01G197300 chr1B 95.312 64 0 2 8419 8479 656234123 656234060 2.290000e-16 99.0
14 TraesCS1B01G197300 chr1B 93.548 62 3 1 2898 2958 354928155 354928094 3.830000e-14 91.6
15 TraesCS1B01G197300 chr1B 93.548 62 3 1 3014 3075 354928271 354928211 3.830000e-14 91.6
16 TraesCS1B01G197300 chr1B 81.707 82 12 3 6211 6289 296487968 296488049 2.320000e-06 65.8
17 TraesCS1B01G197300 chr1A 93.328 2623 77 33 3314 5886 343401302 343398728 0.000000e+00 3784.0
18 TraesCS1B01G197300 chr1A 92.540 1957 59 30 5940 7838 343398728 343396801 0.000000e+00 2724.0
19 TraesCS1B01G197300 chr1A 92.798 847 38 8 8478 9307 343396091 343395251 0.000000e+00 1205.0
20 TraesCS1B01G197300 chr1A 90.625 608 29 14 7837 8419 343396697 343396093 0.000000e+00 782.0
21 TraesCS1B01G197300 chr1A 79.214 789 135 23 4889 5657 343421020 343420241 1.140000e-143 521.0
22 TraesCS1B01G197300 chr1A 81.890 508 89 2 978 1485 343424742 343424238 9.230000e-115 425.0
23 TraesCS1B01G197300 chr1A 89.778 225 17 6 5806 6029 82525846 82526065 5.880000e-72 283.0
24 TraesCS1B01G197300 chr1A 76.888 437 58 19 8530 8948 343419535 343419124 3.640000e-49 207.0
25 TraesCS1B01G197300 chr1A 88.344 163 18 1 1722 1884 385659131 385659292 2.830000e-45 195.0
26 TraesCS1B01G197300 chr1A 92.982 57 4 0 9414 9470 518503102 518503046 6.400000e-12 84.2
27 TraesCS1B01G197300 chr1D 94.759 2137 68 22 6291 8400 258339685 258341804 0.000000e+00 3286.0
28 TraesCS1B01G197300 chr1D 93.540 1548 57 28 4225 5762 258337905 258339419 0.000000e+00 2265.0
29 TraesCS1B01G197300 chr1D 95.610 1344 48 6 880 2215 258332210 258333550 0.000000e+00 2145.0
30 TraesCS1B01G197300 chr1D 96.299 1189 36 5 3006 4190 258336724 258337908 0.000000e+00 1945.0
31 TraesCS1B01G197300 chr1D 92.513 561 28 4 8478 9031 258341924 258342477 0.000000e+00 791.0
32 TraesCS1B01G197300 chr1D 81.032 659 119 3 978 1634 258090235 258090889 4.120000e-143 520.0
33 TraesCS1B01G197300 chr1D 79.393 791 121 28 4889 5657 258092513 258093283 4.120000e-143 520.0
34 TraesCS1B01G197300 chr1D 93.043 345 7 4 2619 2958 258336461 258336793 1.160000e-133 488.0
35 TraesCS1B01G197300 chr1D 98.049 205 1 1 2371 2572 258336258 258336462 4.420000e-93 353.0
36 TraesCS1B01G197300 chr1D 96.602 206 6 1 6063 6267 258339417 258339622 3.440000e-89 340.0
37 TraesCS1B01G197300 chr1D 96.296 189 6 1 9024 9212 258344585 258344772 9.700000e-80 309.0
38 TraesCS1B01G197300 chr1D 94.536 183 10 0 5848 6030 86918505 86918687 5.880000e-72 283.0
39 TraesCS1B01G197300 chr1D 77.064 436 59 17 8530 8948 258094413 258094824 7.830000e-51 213.0
40 TraesCS1B01G197300 chr1D 87.234 188 18 2 9724 9911 217315511 217315692 1.010000e-49 209.0
41 TraesCS1B01G197300 chr1D 79.921 254 30 8 9364 9597 217315189 217315441 6.180000e-37 167.0
42 TraesCS1B01G197300 chr1D 95.960 99 3 1 9212 9309 258345728 258345826 1.030000e-34 159.0
43 TraesCS1B01G197300 chr1D 96.703 91 3 0 2283 2373 258333549 258333639 1.730000e-32 152.0
44 TraesCS1B01G197300 chr1D 91.429 70 5 1 2948 3016 258336724 258336793 2.960000e-15 95.3
45 TraesCS1B01G197300 chr6A 97.045 880 23 3 1 879 162251201 162252078 0.000000e+00 1478.0
46 TraesCS1B01G197300 chr7B 88.017 918 55 17 1 879 677055647 677056548 0.000000e+00 1035.0
47 TraesCS1B01G197300 chr7B 92.089 316 23 2 566 880 629890642 629890328 2.550000e-120 444.0
48 TraesCS1B01G197300 chr7B 87.209 344 17 6 1 319 629891005 629890664 5.680000e-97 366.0
49 TraesCS1B01G197300 chr2B 85.495 910 87 23 2 879 666098066 666097170 0.000000e+00 907.0
50 TraesCS1B01G197300 chr2B 79.870 462 66 25 420 878 250061776 250062213 7.500000e-81 313.0
51 TraesCS1B01G197300 chr2B 79.753 405 28 20 25 404 40056342 40055967 2.770000e-60 244.0
52 TraesCS1B01G197300 chr2B 88.158 76 6 3 6033 6107 331023329 331023256 4.950000e-13 87.9
53 TraesCS1B01G197300 chr2B 94.545 55 3 0 9315 9369 72112431 72112485 1.780000e-12 86.1
54 TraesCS1B01G197300 chr4A 92.751 607 20 11 3844 4445 629938794 629939381 0.000000e+00 856.0
55 TraesCS1B01G197300 chr4A 92.268 194 15 0 5847 6040 420020559 420020366 9.840000e-70 276.0
56 TraesCS1B01G197300 chr4A 94.643 56 3 0 9314 9369 500112515 500112460 4.950000e-13 87.9
57 TraesCS1B01G197300 chr4A 87.692 65 4 4 6227 6288 477880015 477880078 1.390000e-08 73.1
58 TraesCS1B01G197300 chr4A 87.302 63 5 2 6228 6288 613419997 613419936 1.790000e-07 69.4
59 TraesCS1B01G197300 chr3B 84.914 464 52 10 418 878 739052025 739052473 4.240000e-123 453.0
60 TraesCS1B01G197300 chr3B 80.263 152 24 5 5677 5827 529674460 529674314 1.060000e-19 110.0
61 TraesCS1B01G197300 chr3B 80.272 147 26 2 5664 5809 455682277 455682421 3.800000e-19 108.0
62 TraesCS1B01G197300 chr3B 92.308 65 3 1 8418 8480 351292313 351292249 3.830000e-14 91.6
63 TraesCS1B01G197300 chr3B 96.429 56 1 1 8425 8479 663123814 663123869 3.830000e-14 91.6
64 TraesCS1B01G197300 chr3A 84.222 469 56 11 418 880 44821482 44821938 3.300000e-119 440.0
65 TraesCS1B01G197300 chr3A 89.744 156 15 1 1727 1882 466791159 466791005 2.190000e-46 198.0
66 TraesCS1B01G197300 chr3A 94.444 54 3 0 9316 9369 634661736 634661789 6.400000e-12 84.2
67 TraesCS1B01G197300 chr6B 83.369 469 63 13 420 879 696898150 696897688 4.300000e-113 420.0
68 TraesCS1B01G197300 chr6B 83.621 464 57 17 428 879 690237890 690237434 1.550000e-112 418.0
69 TraesCS1B01G197300 chr6B 80.342 117 12 7 9369 9474 10230754 10230638 2.980000e-10 78.7
70 TraesCS1B01G197300 chr5D 93.609 266 17 0 9617 9882 369761546 369761281 2.010000e-106 398.0
71 TraesCS1B01G197300 chr5D 92.857 266 19 0 9617 9882 448579460 448579725 4.360000e-103 387.0
72 TraesCS1B01G197300 chr5D 90.196 255 20 2 9623 9877 520469473 520469224 2.680000e-85 327.0
73 TraesCS1B01G197300 chr5D 85.081 248 17 4 9369 9596 369761896 369761649 1.670000e-57 235.0
74 TraesCS1B01G197300 chr5D 84.274 248 19 4 9369 9596 448579110 448579357 3.620000e-54 224.0
75 TraesCS1B01G197300 chr5D 84.000 200 19 7 9410 9597 520469780 520469582 7.940000e-41 180.0
76 TraesCS1B01G197300 chr5D 81.250 112 10 5 9369 9470 124719582 124719692 8.280000e-11 80.5
77 TraesCS1B01G197300 chr5D 88.136 59 4 2 6232 6288 411741577 411741634 6.450000e-07 67.6
78 TraesCS1B01G197300 chr7D 82.725 411 34 21 1 381 450005990 450006393 2.070000e-86 331.0
79 TraesCS1B01G197300 chr7D 87.151 179 16 7 1703 1879 156796818 156796991 7.880000e-46 196.0
80 TraesCS1B01G197300 chr7D 96.491 57 0 1 8425 8479 551735506 551735562 1.060000e-14 93.5
81 TraesCS1B01G197300 chr7D 96.364 55 2 0 8426 8480 500968611 500968665 3.830000e-14 91.6
82 TraesCS1B01G197300 chr7D 92.157 51 3 1 6239 6288 594820699 594820749 4.980000e-08 71.3
83 TraesCS1B01G197300 chr4B 89.354 263 26 1 9617 9877 590141408 590141670 7.450000e-86 329.0
84 TraesCS1B01G197300 chr4B 88.636 264 22 7 137 397 469447268 469447526 2.090000e-81 315.0
85 TraesCS1B01G197300 chr4B 91.960 199 13 3 5846 6043 128540669 128540865 9.840000e-70 276.0
86 TraesCS1B01G197300 chr4B 81.534 352 28 18 1 323 469447001 469447344 1.280000e-63 255.0
87 TraesCS1B01G197300 chr4B 94.118 68 4 0 9879 9946 590141715 590141782 4.910000e-18 104.0
88 TraesCS1B01G197300 chr4B 94.545 55 3 0 9316 9370 486429834 486429888 1.780000e-12 86.1
89 TraesCS1B01G197300 chr5B 82.005 389 34 21 52 416 399280939 399281315 2.100000e-76 298.0
90 TraesCS1B01G197300 chr5B 94.444 54 3 0 9316 9369 592750139 592750086 6.400000e-12 84.2
91 TraesCS1B01G197300 chr5B 87.692 65 7 1 6226 6289 658644339 658644403 3.850000e-09 75.0
92 TraesCS1B01G197300 chr4D 96.154 182 7 0 5848 6029 482703444 482703625 2.100000e-76 298.0
93 TraesCS1B01G197300 chr4D 87.692 65 4 4 6227 6288 98451687 98451624 1.390000e-08 73.1
94 TraesCS1B01G197300 chr3D 95.028 181 9 0 5848 6028 422517613 422517793 1.640000e-72 285.0
95 TraesCS1B01G197300 chr3D 83.673 245 23 6 9370 9597 469493641 469493397 2.180000e-51 215.0
96 TraesCS1B01G197300 chr3D 92.424 66 2 1 9879 9944 469492997 469492935 3.830000e-14 91.6
97 TraesCS1B01G197300 chr3D 96.296 54 2 0 9316 9369 10809517 10809464 1.380000e-13 89.8
98 TraesCS1B01G197300 chr3D 94.444 54 3 0 9316 9369 10822840 10822787 6.400000e-12 84.2
99 TraesCS1B01G197300 chr3D 90.476 63 6 0 9879 9941 129396034 129395972 6.400000e-12 84.2
100 TraesCS1B01G197300 chr3D 84.848 66 6 4 5679 5742 41722816 41722879 8.340000e-06 63.9
101 TraesCS1B01G197300 chr2A 94.118 187 11 0 5843 6029 722747072 722747258 1.640000e-72 285.0
102 TraesCS1B01G197300 chr2A 90.184 163 13 2 1725 1887 329688021 329688180 1.010000e-49 209.0
103 TraesCS1B01G197300 chr2A 80.000 300 41 14 1 291 123662618 123662329 4.710000e-48 204.0
104 TraesCS1B01G197300 chr2A 81.206 282 24 7 1 256 123568061 123567783 6.090000e-47 200.0
105 TraesCS1B01G197300 chr2A 89.474 76 5 3 6033 6107 324633624 324633551 1.060000e-14 93.5
106 TraesCS1B01G197300 chr2A 90.909 66 3 1 8423 8488 451815999 451816061 1.780000e-12 86.1
107 TraesCS1B01G197300 chr7A 94.565 184 8 2 5848 6029 83785017 83784834 5.880000e-72 283.0
108 TraesCS1B01G197300 chr7A 89.506 162 15 2 1726 1886 486930093 486929933 4.710000e-48 204.0
109 TraesCS1B01G197300 chr7A 89.809 157 13 3 1725 1879 271731064 271730909 2.190000e-46 198.0
110 TraesCS1B01G197300 chr7A 98.182 55 1 0 8425 8479 418498743 418498689 8.220000e-16 97.1
111 TraesCS1B01G197300 chr7A 80.952 84 10 4 6027 6109 577769890 577769812 3.000000e-05 62.1
112 TraesCS1B01G197300 chr5A 82.796 279 28 10 9661 9935 673143330 673143592 2.160000e-56 231.0
113 TraesCS1B01G197300 chr5A 92.969 128 7 2 9623 9748 673143205 673143332 1.710000e-42 185.0
114 TraesCS1B01G197300 chr5A 81.538 195 26 4 9413 9597 673142909 673143103 1.730000e-32 152.0
115 TraesCS1B01G197300 chr5A 90.351 114 10 1 9623 9736 499620962 499620850 2.240000e-31 148.0
116 TraesCS1B01G197300 chr5A 86.325 117 15 1 9482 9597 499621186 499621070 1.050000e-24 126.0
117 TraesCS1B01G197300 chr6D 90.323 155 12 3 1734 1887 386931498 386931650 6.090000e-47 200.0
118 TraesCS1B01G197300 chr6D 96.667 60 0 1 8422 8479 284395009 284394950 2.290000e-16 99.0
119 TraesCS1B01G197300 chr2D 88.344 163 16 2 1725 1887 286676357 286676198 1.020000e-44 193.0
120 TraesCS1B01G197300 chr2D 90.909 66 4 1 8425 8488 134642399 134642334 4.950000e-13 87.9
121 TraesCS1B01G197300 chr2D 85.366 82 9 3 6027 6107 218020852 218020931 2.300000e-11 82.4
122 TraesCS1B01G197300 chr2D 92.593 54 4 0 9316 9369 251933070 251933123 2.980000e-10 78.7
123 TraesCS1B01G197300 chrUn 83.226 155 23 2 5674 5827 171672579 171672427 1.350000e-28 139.0
124 TraesCS1B01G197300 chrUn 83.226 155 23 2 5674 5827 171733751 171733903 1.350000e-28 139.0
125 TraesCS1B01G197300 chrUn 96.296 54 2 0 9316 9369 335936531 335936478 1.380000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G197300 chr1B 354921223 354931168 9945 True 3789.240000 18367 96.086000 1 9946 5 chr1B.!!$R5 9945
1 TraesCS1B01G197300 chr1B 667549744 667550642 898 True 955.000000 955 86.448000 2 881 1 chr1B.!!$R4 879
2 TraesCS1B01G197300 chr1B 355103450 355107511 4061 True 404.333333 527 79.020000 978 8948 3 chr1B.!!$R7 7970
3 TraesCS1B01G197300 chr1B 354983457 354989264 5807 True 316.333333 525 84.240000 978 8639 3 chr1B.!!$R6 7661
4 TraesCS1B01G197300 chr1A 343395251 343401302 6051 True 2123.750000 3784 92.322750 3314 9307 4 chr1A.!!$R2 5993
5 TraesCS1B01G197300 chr1A 343419124 343424742 5618 True 384.333333 521 79.330667 978 8948 3 chr1A.!!$R3 7970
6 TraesCS1B01G197300 chr1D 258332210 258345826 13616 False 1027.358333 3286 95.066917 880 9309 12 chr1D.!!$F4 8429
7 TraesCS1B01G197300 chr1D 258090235 258094824 4589 False 417.666667 520 79.163000 978 8948 3 chr1D.!!$F3 7970
8 TraesCS1B01G197300 chr6A 162251201 162252078 877 False 1478.000000 1478 97.045000 1 879 1 chr6A.!!$F1 878
9 TraesCS1B01G197300 chr7B 677055647 677056548 901 False 1035.000000 1035 88.017000 1 879 1 chr7B.!!$F1 878
10 TraesCS1B01G197300 chr7B 629890328 629891005 677 True 405.000000 444 89.649000 1 880 2 chr7B.!!$R1 879
11 TraesCS1B01G197300 chr2B 666097170 666098066 896 True 907.000000 907 85.495000 2 879 1 chr2B.!!$R3 877
12 TraesCS1B01G197300 chr4A 629938794 629939381 587 False 856.000000 856 92.751000 3844 4445 1 chr4A.!!$F2 601
13 TraesCS1B01G197300 chr5D 369761281 369761896 615 True 316.500000 398 89.345000 9369 9882 2 chr5D.!!$R1 513
14 TraesCS1B01G197300 chr5D 448579110 448579725 615 False 305.500000 387 88.565500 9369 9882 2 chr5D.!!$F3 513
15 TraesCS1B01G197300 chr5D 520469224 520469780 556 True 253.500000 327 87.098000 9410 9877 2 chr5D.!!$R2 467
16 TraesCS1B01G197300 chr4B 469447001 469447526 525 False 285.000000 315 85.085000 1 397 2 chr4B.!!$F3 396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 1053 1.448922 TTTCCGGCGAAAAGTGTGGG 61.449 55.0 9.30 0.00 35.02 4.61 F
1061 1227 0.835941 AGCATCTCCGATTGCCTCTT 59.164 50.0 0.00 0.00 39.72 2.85 F
2942 7251 0.386476 AGCGTGTTCCGACAGTGTTA 59.614 50.0 0.00 0.00 39.56 2.41 F
3831 8141 0.393808 AACATCGTATGTGCACCCCC 60.394 55.0 15.69 0.18 44.07 5.40 F
3911 8221 0.802607 GAATCCTGACTCCGCACGTC 60.803 60.0 0.00 0.00 0.00 4.34 F
5890 12057 0.177836 AAAACTGTTGCCTTGTGCCC 59.822 50.0 0.00 0.00 40.16 5.36 F
5917 12084 0.032952 CACGGGTTCGAGTTCTGGAA 59.967 55.0 0.00 0.00 40.11 3.53 F
5932 12099 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.0 0.00 0.00 44.83 4.26 F
7809 14235 0.033601 TCCACTGTGTTTGGGCTTGT 60.034 50.0 7.08 0.00 34.56 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2016 3662 0.182537 CCTTGTGGTTGTGGGTCTGA 59.817 55.000 0.00 0.00 0.00 3.27 R
2990 7299 0.572590 GCATAGCGCTAACACTGTCG 59.427 55.000 22.98 3.93 37.77 4.35 R
4746 9076 0.328258 AACTGGCTGGTGGTATGGAC 59.672 55.000 0.00 0.00 0.00 4.02 R
5724 11884 1.676006 AGCCTTGGTCAAACTTCAACG 59.324 47.619 0.00 0.00 0.00 4.10 R
5898 12065 0.032952 TTCCAGAACTCGAACCCGTG 59.967 55.000 0.00 0.00 37.05 4.94 R
7093 13331 1.094785 CAAACACGGATGCCTTAGGG 58.905 55.000 0.00 0.00 0.00 3.53 R
7795 14221 2.616634 TACGTACAAGCCCAAACACA 57.383 45.000 0.00 0.00 0.00 3.72 R
7907 14438 4.141959 GCACAGGCCAACCAAAACATATAT 60.142 41.667 5.01 0.00 39.06 0.86 R
9621 19672 0.036858 GCATCGAATCCCTCTAGGCC 60.037 60.000 0.00 0.00 34.51 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 71 8.470805 ACAAACTGAACATTTTGTTGGTATACA 58.529 29.630 14.37 0.00 41.28 2.29
408 550 9.770097 TCAAACATTTTTCCAAAATATACAGCA 57.230 25.926 0.00 0.00 0.00 4.41
787 947 5.703730 AGGTTTGATTTAGACCGGGATTA 57.296 39.130 6.32 0.00 38.48 1.75
792 952 5.943349 TGATTTAGACCGGGATTACAGAA 57.057 39.130 6.32 0.00 0.00 3.02
807 967 3.446442 ACAGAATTCAGGGTGCAATCT 57.554 42.857 8.44 0.00 0.00 2.40
809 969 5.121380 ACAGAATTCAGGGTGCAATCTAT 57.879 39.130 8.44 0.00 0.00 1.98
819 979 4.104102 AGGGTGCAATCTATCGGGATTTTA 59.896 41.667 0.00 0.00 34.15 1.52
893 1053 1.448922 TTTCCGGCGAAAAGTGTGGG 61.449 55.000 9.30 0.00 35.02 4.61
894 1054 4.038080 CCGGCGAAAAGTGTGGGC 62.038 66.667 9.30 0.00 0.00 5.36
895 1055 3.283684 CGGCGAAAAGTGTGGGCA 61.284 61.111 0.00 0.00 0.00 5.36
896 1056 2.644992 GGCGAAAAGTGTGGGCAG 59.355 61.111 0.00 0.00 0.00 4.85
972 1132 3.379445 ACGGTCGCATTCCCTCGT 61.379 61.111 0.00 0.00 0.00 4.18
1061 1227 0.835941 AGCATCTCCGATTGCCTCTT 59.164 50.000 0.00 0.00 39.72 2.85
1236 1402 3.785859 GGCATCCACCTCCTCGCA 61.786 66.667 0.00 0.00 0.00 5.10
1350 1516 3.322466 CCGGTGAGCTTCCCCAGT 61.322 66.667 0.00 0.00 0.00 4.00
1527 3167 5.175856 GCTTACATCATGTTCCTCGTGTATC 59.824 44.000 0.00 0.00 34.87 2.24
1566 3206 3.371380 GGATTTCCATTGCTCTCTCCACT 60.371 47.826 0.00 0.00 35.64 4.00
1667 3307 5.520649 TGTTGCTTCGGTTTATTTTTGTTCC 59.479 36.000 0.00 0.00 0.00 3.62
1705 3351 8.642432 TCTTATCTTGTATTGTAGTAGCTGCAT 58.358 33.333 4.12 0.00 0.00 3.96
1718 3364 2.648059 AGCTGCATCACCCAATTAGTC 58.352 47.619 1.02 0.00 0.00 2.59
1821 3467 7.041098 AGTGTGTTTATTCACTCATTTCAGTCC 60.041 37.037 0.00 0.00 40.28 3.85
1824 3470 7.117236 GTGTTTATTCACTCATTTCAGTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
1843 3489 9.085645 AGTCCGTATGTAGTCCATATTGAAATA 57.914 33.333 0.00 0.00 38.29 1.40
1957 3603 7.615365 ACTTGCTATTCATTGGATGGAGTTAAA 59.385 33.333 0.00 0.00 0.00 1.52
2016 3662 2.230660 GCTGTAAACTGCACCCTTCTT 58.769 47.619 7.06 0.00 40.06 2.52
2059 3705 9.657419 AGGAAACAATTCAAAATATCCATGTTC 57.343 29.630 0.00 0.00 37.29 3.18
2060 3706 8.594687 GGAAACAATTCAAAATATCCATGTTCG 58.405 33.333 0.00 0.00 37.29 3.95
2217 3895 9.569122 AGTTACTTCCATACAACAACTACAAAT 57.431 29.630 0.00 0.00 0.00 2.32
2222 3900 8.693120 TTCCATACAACAACTACAAATTGGTA 57.307 30.769 0.00 0.00 0.00 3.25
2223 3901 8.330466 TCCATACAACAACTACAAATTGGTAG 57.670 34.615 17.07 17.07 44.97 3.18
2224 3902 7.392113 TCCATACAACAACTACAAATTGGTAGG 59.608 37.037 21.55 9.25 43.99 3.18
2225 3903 7.175990 CCATACAACAACTACAAATTGGTAGGT 59.824 37.037 21.55 14.25 43.99 3.08
2227 3905 7.412853 ACAACAACTACAAATTGGTAGGTTT 57.587 32.000 21.55 7.82 43.99 3.27
2230 3908 8.626526 CAACAACTACAAATTGGTAGGTTTAGT 58.373 33.333 21.55 8.88 43.99 2.24
2231 3909 8.387190 ACAACTACAAATTGGTAGGTTTAGTC 57.613 34.615 21.55 0.00 43.99 2.59
2232 3910 8.215736 ACAACTACAAATTGGTAGGTTTAGTCT 58.784 33.333 21.55 0.00 43.99 3.24
2233 3911 8.504005 CAACTACAAATTGGTAGGTTTAGTCTG 58.496 37.037 21.55 0.70 43.99 3.51
2234 3912 7.742767 ACTACAAATTGGTAGGTTTAGTCTGT 58.257 34.615 21.55 0.55 43.99 3.41
2235 3913 6.877611 ACAAATTGGTAGGTTTAGTCTGTG 57.122 37.500 0.00 0.00 0.00 3.66
2236 3914 6.597562 ACAAATTGGTAGGTTTAGTCTGTGA 58.402 36.000 0.00 0.00 0.00 3.58
2237 3915 7.057894 ACAAATTGGTAGGTTTAGTCTGTGAA 58.942 34.615 0.00 0.00 0.00 3.18
2238 3916 7.012989 ACAAATTGGTAGGTTTAGTCTGTGAAC 59.987 37.037 0.00 0.00 0.00 3.18
2239 3917 5.617528 TTGGTAGGTTTAGTCTGTGAACA 57.382 39.130 0.00 0.00 0.00 3.18
2240 3918 5.617528 TGGTAGGTTTAGTCTGTGAACAA 57.382 39.130 0.00 0.00 0.00 2.83
2259 3937 1.480789 ACACCTTTTTGTGGACCCAC 58.519 50.000 12.07 12.07 46.33 4.61
2267 3945 2.676471 GTGGACCCACATGGCCAC 60.676 66.667 8.16 10.76 46.73 5.01
2268 3946 3.181530 TGGACCCACATGGCCACA 61.182 61.111 8.16 0.00 35.98 4.17
2269 3947 2.676471 GGACCCACATGGCCACAC 60.676 66.667 8.16 0.00 37.83 3.82
2270 3948 2.115052 GACCCACATGGCCACACA 59.885 61.111 8.16 0.00 37.83 3.72
2271 3949 1.530419 GACCCACATGGCCACACAA 60.530 57.895 8.16 0.00 37.83 3.33
2272 3950 1.805428 GACCCACATGGCCACACAAC 61.805 60.000 8.16 0.00 37.83 3.32
2273 3951 1.831726 CCCACATGGCCACACAACA 60.832 57.895 8.16 0.00 0.00 3.33
2274 3952 1.363443 CCACATGGCCACACAACAC 59.637 57.895 8.16 0.00 0.00 3.32
2275 3953 1.108727 CCACATGGCCACACAACACT 61.109 55.000 8.16 0.00 0.00 3.55
2276 3954 0.746063 CACATGGCCACACAACACTT 59.254 50.000 8.16 0.00 0.00 3.16
2278 3956 1.136695 ACATGGCCACACAACACTTTG 59.863 47.619 8.16 0.00 38.83 2.77
2280 3958 2.130272 TGGCCACACAACACTTTGTA 57.870 45.000 0.00 0.00 44.57 2.41
2281 3959 1.746220 TGGCCACACAACACTTTGTAC 59.254 47.619 0.00 0.00 44.57 2.90
2282 3960 1.066454 GGCCACACAACACTTTGTACC 59.934 52.381 0.00 0.00 44.57 3.34
2283 3961 1.746220 GCCACACAACACTTTGTACCA 59.254 47.619 0.00 0.00 44.57 3.25
2284 3962 2.478879 GCCACACAACACTTTGTACCAC 60.479 50.000 0.00 0.00 44.57 4.16
2603 6908 6.909550 ATATGTTTTGACCACAGGCTTAAA 57.090 33.333 0.00 0.00 0.00 1.52
2606 6911 1.989706 TTGACCACAGGCTTAAACCC 58.010 50.000 0.00 0.00 0.00 4.11
2607 6912 1.145571 TGACCACAGGCTTAAACCCT 58.854 50.000 0.00 0.00 0.00 4.34
2613 6918 2.770827 GGCTTAAACCCTGCCCCT 59.229 61.111 0.00 0.00 40.71 4.79
2617 6922 1.275291 GCTTAAACCCTGCCCCTTTTC 59.725 52.381 0.00 0.00 0.00 2.29
2734 7039 3.304293 GCAACAAGCAAAGTGAAACACTC 59.696 43.478 4.88 0.00 43.12 3.51
2937 7246 3.303495 CACTATAAAGCGTGTTCCGACAG 59.697 47.826 0.00 0.00 39.56 3.51
2938 7247 2.450609 ATAAAGCGTGTTCCGACAGT 57.549 45.000 0.00 0.00 39.56 3.55
2939 7248 1.493772 TAAAGCGTGTTCCGACAGTG 58.506 50.000 0.00 0.00 39.56 3.66
2940 7249 0.461339 AAAGCGTGTTCCGACAGTGT 60.461 50.000 0.00 0.00 39.56 3.55
2941 7250 0.461339 AAGCGTGTTCCGACAGTGTT 60.461 50.000 0.00 0.00 39.56 3.32
2942 7251 0.386476 AGCGTGTTCCGACAGTGTTA 59.614 50.000 0.00 0.00 39.56 2.41
2943 7252 0.782384 GCGTGTTCCGACAGTGTTAG 59.218 55.000 0.00 0.00 39.56 2.34
2944 7253 0.782384 CGTGTTCCGACAGTGTTAGC 59.218 55.000 0.00 0.00 39.56 3.09
2945 7254 0.782384 GTGTTCCGACAGTGTTAGCG 59.218 55.000 0.00 0.00 36.20 4.26
2946 7255 0.942410 TGTTCCGACAGTGTTAGCGC 60.942 55.000 0.00 0.00 0.00 5.92
2947 7256 0.666577 GTTCCGACAGTGTTAGCGCT 60.667 55.000 17.26 17.26 35.54 5.92
2948 7257 0.883153 TTCCGACAGTGTTAGCGCTA 59.117 50.000 14.45 14.45 33.54 4.26
2949 7258 1.100510 TCCGACAGTGTTAGCGCTAT 58.899 50.000 19.60 0.94 33.54 2.97
2950 7259 1.200483 CCGACAGTGTTAGCGCTATG 58.800 55.000 19.60 15.76 33.54 2.23
2951 7260 0.572590 CGACAGTGTTAGCGCTATGC 59.427 55.000 19.60 14.62 46.98 3.14
2969 7278 9.088512 GCGCTATGCTTACTTATGTTTATATCT 57.911 33.333 0.00 0.00 41.73 1.98
2995 7304 5.763444 CACTATAAAGTGTGTTCCGACAG 57.237 43.478 0.00 0.00 46.76 3.51
2996 7305 5.227908 CACTATAAAGTGTGTTCCGACAGT 58.772 41.667 0.00 0.00 46.76 3.55
2997 7306 5.118664 CACTATAAAGTGTGTTCCGACAGTG 59.881 44.000 0.00 0.00 46.76 3.66
2998 7307 2.396590 AAAGTGTGTTCCGACAGTGT 57.603 45.000 0.00 0.00 36.20 3.55
2999 7308 2.396590 AAGTGTGTTCCGACAGTGTT 57.603 45.000 0.00 0.00 36.20 3.32
3000 7309 3.530265 AAGTGTGTTCCGACAGTGTTA 57.470 42.857 0.00 0.00 36.20 2.41
3001 7310 3.093717 AGTGTGTTCCGACAGTGTTAG 57.906 47.619 0.00 0.00 36.20 2.34
3002 7311 1.525619 GTGTGTTCCGACAGTGTTAGC 59.474 52.381 0.00 0.00 36.20 3.09
3003 7312 0.782384 GTGTTCCGACAGTGTTAGCG 59.218 55.000 0.00 0.00 36.20 4.26
3004 7313 0.942410 TGTTCCGACAGTGTTAGCGC 60.942 55.000 0.00 0.00 0.00 5.92
3005 7314 0.666577 GTTCCGACAGTGTTAGCGCT 60.667 55.000 17.26 17.26 35.54 5.92
3006 7315 0.883153 TTCCGACAGTGTTAGCGCTA 59.117 50.000 14.45 14.45 33.54 4.26
3007 7316 1.100510 TCCGACAGTGTTAGCGCTAT 58.899 50.000 19.60 0.94 33.54 2.97
3008 7317 1.200483 CCGACAGTGTTAGCGCTATG 58.800 55.000 19.60 15.76 33.54 2.23
3009 7318 0.572590 CGACAGTGTTAGCGCTATGC 59.427 55.000 19.60 14.62 46.98 3.14
3027 7336 9.088512 GCGCTATGCTTACTTATGTTTATATCT 57.911 33.333 0.00 0.00 41.73 1.98
3515 7824 7.631377 GCACCAGATTCTTAAATTGGCACTTAT 60.631 37.037 0.00 0.00 31.55 1.73
3546 7855 5.598416 TGTAGGTGGTTATCAGTCATCAG 57.402 43.478 0.00 0.00 0.00 2.90
3643 7952 2.286654 GCGACAATGGAGCTAATCTTGC 60.287 50.000 0.00 0.00 0.00 4.01
3700 8009 1.078143 GTCATGGGCAGGGACAGTC 60.078 63.158 0.00 0.00 0.00 3.51
3831 8141 0.393808 AACATCGTATGTGCACCCCC 60.394 55.000 15.69 0.18 44.07 5.40
3853 8163 2.431454 AGAAAACTAAGCTCTGCTGGC 58.569 47.619 0.00 0.00 39.62 4.85
3911 8221 0.802607 GAATCCTGACTCCGCACGTC 60.803 60.000 0.00 0.00 0.00 4.34
4019 8334 6.345298 TGTGAGCATTATCAACGAGGATAAA 58.655 36.000 14.26 0.31 41.60 1.40
4145 8460 1.662360 CACATTGTTTCGACTGCACG 58.338 50.000 0.00 0.00 0.00 5.34
4226 8541 5.973565 GCATACAAAATGCAGGAATAGTGTC 59.026 40.000 5.14 0.00 44.00 3.67
4275 8590 1.014564 GTCGCCAGTGGAGCTAACAC 61.015 60.000 15.20 11.94 39.10 3.32
4518 8847 7.166167 ACAGACCGACCTTTTATCTTGTATTT 58.834 34.615 0.00 0.00 0.00 1.40
4519 8848 8.316214 ACAGACCGACCTTTTATCTTGTATTTA 58.684 33.333 0.00 0.00 0.00 1.40
4652 8982 8.911965 TGGAAACAAATGCATATATATGTGTGT 58.088 29.630 21.10 13.52 37.44 3.72
4653 8983 9.184062 GGAAACAAATGCATATATATGTGTGTG 57.816 33.333 21.10 16.85 36.11 3.82
4654 8984 9.734620 GAAACAAATGCATATATATGTGTGTGT 57.265 29.630 21.10 17.36 36.11 3.72
4655 8985 9.518906 AAACAAATGCATATATATGTGTGTGTG 57.481 29.630 21.10 14.50 36.11 3.82
4656 8986 8.224389 ACAAATGCATATATATGTGTGTGTGT 57.776 30.769 21.10 14.99 36.11 3.72
4657 8987 8.130469 ACAAATGCATATATATGTGTGTGTGTG 58.870 33.333 21.10 12.10 36.11 3.82
4658 8988 7.806409 AATGCATATATATGTGTGTGTGTGT 57.194 32.000 21.10 0.00 36.11 3.72
4659 8989 6.601741 TGCATATATATGTGTGTGTGTGTG 57.398 37.500 21.10 0.00 36.11 3.82
4660 8990 6.112058 TGCATATATATGTGTGTGTGTGTGT 58.888 36.000 21.10 0.00 36.11 3.72
4661 8991 6.036953 TGCATATATATGTGTGTGTGTGTGTG 59.963 38.462 21.10 0.00 36.11 3.82
4662 8992 6.037062 GCATATATATGTGTGTGTGTGTGTGT 59.963 38.462 21.10 0.00 36.11 3.72
4663 8993 5.861222 ATATATGTGTGTGTGTGTGTGTG 57.139 39.130 0.00 0.00 0.00 3.82
4664 8994 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
4665 8995 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4666 8996 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4667 8997 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4668 8998 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
4669 8999 2.070028 GTGTGTGTGTGTGTGTGTGTA 58.930 47.619 0.00 0.00 0.00 2.90
4670 9000 2.675844 GTGTGTGTGTGTGTGTGTGTAT 59.324 45.455 0.00 0.00 0.00 2.29
4671 9001 3.866327 GTGTGTGTGTGTGTGTGTGTATA 59.134 43.478 0.00 0.00 0.00 1.47
4672 9002 4.330347 GTGTGTGTGTGTGTGTGTGTATAA 59.670 41.667 0.00 0.00 0.00 0.98
4673 9003 5.007234 GTGTGTGTGTGTGTGTGTGTATAAT 59.993 40.000 0.00 0.00 0.00 1.28
4674 9004 5.007136 TGTGTGTGTGTGTGTGTGTATAATG 59.993 40.000 0.00 0.00 0.00 1.90
4675 9005 5.007234 GTGTGTGTGTGTGTGTGTATAATGT 59.993 40.000 0.00 0.00 0.00 2.71
4676 9006 6.201234 GTGTGTGTGTGTGTGTGTATAATGTA 59.799 38.462 0.00 0.00 0.00 2.29
4677 9007 6.931840 TGTGTGTGTGTGTGTGTATAATGTAT 59.068 34.615 0.00 0.00 0.00 2.29
4884 9236 5.256474 AGTGCAAACTATAATGCCAACTCT 58.744 37.500 0.00 0.00 41.87 3.24
5017 9370 6.377327 TTCCAAATTATTGCCGATCTCTTC 57.623 37.500 0.00 0.00 35.10 2.87
5302 9664 2.543635 ACCTCCCGTTACCACTACAAT 58.456 47.619 0.00 0.00 0.00 2.71
5374 11511 6.543465 TGCTTCTAGATATCAAACATGGTTGG 59.457 38.462 22.96 5.53 0.00 3.77
5553 11691 7.394870 TCTTGTGCTATAAATTTCGAGATCG 57.605 36.000 0.00 0.00 41.45 3.69
5710 11848 7.440856 TCAAAATAATTGAAGTTCTGGGTTTGC 59.559 33.333 4.17 0.00 0.00 3.68
5716 11854 4.479158 TGAAGTTCTGGGTTTGCCTTAAT 58.521 39.130 4.17 0.00 34.45 1.40
5720 11858 4.524328 AGTTCTGGGTTTGCCTTAATTCAG 59.476 41.667 0.00 0.00 34.45 3.02
5724 11884 4.079253 TGGGTTTGCCTTAATTCAGACTC 58.921 43.478 0.00 0.00 34.45 3.36
5886 12053 2.425668 AGCGTTAAAACTGTTGCCTTGT 59.574 40.909 0.00 0.00 0.00 3.16
5887 12054 2.533942 GCGTTAAAACTGTTGCCTTGTG 59.466 45.455 0.00 0.00 0.00 3.33
5888 12055 2.533942 CGTTAAAACTGTTGCCTTGTGC 59.466 45.455 0.00 0.00 41.77 4.57
5889 12056 2.863740 GTTAAAACTGTTGCCTTGTGCC 59.136 45.455 0.00 0.00 40.16 5.01
5890 12057 0.177836 AAAACTGTTGCCTTGTGCCC 59.822 50.000 0.00 0.00 40.16 5.36
5891 12058 0.975040 AAACTGTTGCCTTGTGCCCA 60.975 50.000 0.00 0.00 40.16 5.36
5892 12059 0.760189 AACTGTTGCCTTGTGCCCAT 60.760 50.000 0.00 0.00 40.16 4.00
5893 12060 1.290955 CTGTTGCCTTGTGCCCATG 59.709 57.895 0.00 0.00 40.16 3.66
5894 12061 1.152589 TGTTGCCTTGTGCCCATGA 60.153 52.632 0.00 0.00 40.16 3.07
5895 12062 1.180456 TGTTGCCTTGTGCCCATGAG 61.180 55.000 0.00 0.00 40.16 2.90
5896 12063 1.607178 TTGCCTTGTGCCCATGAGG 60.607 57.895 0.00 0.00 40.16 3.86
5897 12064 2.036256 GCCTTGTGCCCATGAGGT 59.964 61.111 0.00 0.00 38.26 3.85
5898 12065 2.048603 GCCTTGTGCCCATGAGGTC 61.049 63.158 0.00 0.00 38.26 3.85
5899 12066 1.379916 CCTTGTGCCCATGAGGTCA 59.620 57.895 0.00 0.00 38.26 4.02
5900 12067 0.962356 CCTTGTGCCCATGAGGTCAC 60.962 60.000 14.72 14.72 40.82 3.67
5901 12068 1.300971 CTTGTGCCCATGAGGTCACG 61.301 60.000 15.67 0.00 42.33 4.35
5902 12069 2.436646 GTGCCCATGAGGTCACGG 60.437 66.667 0.00 0.00 38.26 4.94
5905 12072 3.077907 CCCATGAGGTCACGGGTT 58.922 61.111 2.76 0.00 43.99 4.11
5906 12073 1.078426 CCCATGAGGTCACGGGTTC 60.078 63.158 2.76 0.00 43.99 3.62
5907 12074 1.447838 CCATGAGGTCACGGGTTCG 60.448 63.158 0.00 0.00 43.02 3.95
5908 12075 1.589630 CATGAGGTCACGGGTTCGA 59.410 57.895 0.00 0.00 40.11 3.71
5909 12076 0.458543 CATGAGGTCACGGGTTCGAG 60.459 60.000 0.00 0.00 40.11 4.04
5910 12077 0.898789 ATGAGGTCACGGGTTCGAGT 60.899 55.000 0.00 0.00 40.11 4.18
5911 12078 1.111116 TGAGGTCACGGGTTCGAGTT 61.111 55.000 0.00 0.00 40.11 3.01
5912 12079 0.388263 GAGGTCACGGGTTCGAGTTC 60.388 60.000 0.00 0.00 40.11 3.01
5913 12080 0.826672 AGGTCACGGGTTCGAGTTCT 60.827 55.000 0.00 0.00 40.11 3.01
5914 12081 0.666577 GGTCACGGGTTCGAGTTCTG 60.667 60.000 0.00 0.00 40.11 3.02
5915 12082 0.666577 GTCACGGGTTCGAGTTCTGG 60.667 60.000 0.00 0.00 40.11 3.86
5916 12083 0.824595 TCACGGGTTCGAGTTCTGGA 60.825 55.000 0.00 0.00 40.11 3.86
5917 12084 0.032952 CACGGGTTCGAGTTCTGGAA 59.967 55.000 0.00 0.00 40.11 3.53
5918 12085 0.754472 ACGGGTTCGAGTTCTGGAAA 59.246 50.000 0.00 0.00 40.11 3.13
5919 12086 1.145803 CGGGTTCGAGTTCTGGAAAC 58.854 55.000 4.44 4.44 39.00 2.78
5920 12087 1.539496 CGGGTTCGAGTTCTGGAAACA 60.539 52.381 12.95 0.00 39.00 2.83
5931 12098 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
5932 12099 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
5933 12100 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
5934 12101 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
5935 12102 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
5936 12103 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
5937 12104 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
5938 12105 3.423539 ACAGCCTCTTGCAGAAATGTA 57.576 42.857 0.00 0.00 44.83 2.29
5939 12106 3.341823 ACAGCCTCTTGCAGAAATGTAG 58.658 45.455 0.00 0.00 44.83 2.74
5963 12130 2.359981 AGGCTGCGTACTATAGACCA 57.640 50.000 6.78 0.00 0.00 4.02
6043 12210 4.202567 TGCCCTTTTCTGTAGAATTGGTCT 60.203 41.667 0.00 0.00 40.71 3.85
6138 12305 1.656441 CCAGTGGTGTTTGCTGAGC 59.344 57.895 0.00 0.00 32.39 4.26
6269 12472 9.582431 TGTTCAATAATTTTGTCGTGGTTTTAA 57.418 25.926 0.00 0.00 0.00 1.52
6378 12611 9.527566 CTTGGAAATTTTATTTTAATGCACACG 57.472 29.630 0.00 0.00 0.00 4.49
6400 12633 4.672409 GGGCGATCTTTCTTTACCATTTG 58.328 43.478 0.00 0.00 0.00 2.32
6452 12685 7.482169 TTTATGAGTGAAGATCCACTAGTGT 57.518 36.000 21.18 3.76 46.45 3.55
6602 12836 3.668141 TGGGCACATGAATTATGACCT 57.332 42.857 0.00 0.00 39.21 3.85
6605 12839 5.316167 TGGGCACATGAATTATGACCTATC 58.684 41.667 0.00 0.00 39.21 2.08
6606 12840 5.073554 TGGGCACATGAATTATGACCTATCT 59.926 40.000 0.00 0.00 39.21 1.98
6607 12841 5.413833 GGGCACATGAATTATGACCTATCTG 59.586 44.000 0.00 0.00 39.21 2.90
6608 12842 5.106396 GGCACATGAATTATGACCTATCTGC 60.106 44.000 0.00 0.00 39.21 4.26
6609 12843 5.471116 GCACATGAATTATGACCTATCTGCA 59.529 40.000 0.00 0.00 39.21 4.41
6610 12844 6.567321 GCACATGAATTATGACCTATCTGCAC 60.567 42.308 0.00 0.00 39.21 4.57
6611 12845 6.709397 CACATGAATTATGACCTATCTGCACT 59.291 38.462 0.00 0.00 39.21 4.40
6612 12846 7.228108 CACATGAATTATGACCTATCTGCACTT 59.772 37.037 0.00 0.00 39.21 3.16
6613 12847 7.443575 ACATGAATTATGACCTATCTGCACTTC 59.556 37.037 0.00 0.00 39.21 3.01
6680 12914 7.908230 ACAAAGTTTCATGTTTTATGCACAAG 58.092 30.769 0.00 0.00 0.00 3.16
6754 12989 6.726258 TGGCGATTTAATGCATGTATCTAG 57.274 37.500 0.00 0.00 0.00 2.43
6936 13171 6.941857 TGCTCTGTGTAATTTAGGATGTGTA 58.058 36.000 0.00 0.00 0.00 2.90
7041 13278 7.937649 TCTTGTTCCTTTTACTTCTTTAAGGC 58.062 34.615 0.00 0.00 37.62 4.35
7093 13331 1.239296 GGGTTGTTGTACGGAAGCCC 61.239 60.000 7.86 3.71 32.18 5.19
7197 13455 7.147828 GCCTCCAGCTTTTTAGGATTTATCTTT 60.148 37.037 4.90 0.00 38.99 2.52
7219 13477 7.492994 TCTTTGGCCAACATTTAGTTAAACAAC 59.507 33.333 20.35 0.00 38.74 3.32
7548 13813 4.523083 TCAGGTATTGTGGAGTATTTGCC 58.477 43.478 0.00 0.00 0.00 4.52
7809 14235 0.033601 TCCACTGTGTTTGGGCTTGT 60.034 50.000 7.08 0.00 34.56 3.16
7882 14413 0.233074 CACATGTGCACTGTGTCGAC 59.767 55.000 27.33 9.11 39.30 4.20
7896 14427 2.063266 TGTCGACAATAGGTGCGTTTC 58.937 47.619 17.62 0.00 0.00 2.78
7898 14429 2.477375 GTCGACAATAGGTGCGTTTCAA 59.523 45.455 11.55 0.00 0.00 2.69
7899 14430 3.059461 GTCGACAATAGGTGCGTTTCAAA 60.059 43.478 11.55 0.00 0.00 2.69
7900 14431 3.749088 TCGACAATAGGTGCGTTTCAAAT 59.251 39.130 0.00 0.00 0.00 2.32
7901 14432 4.930405 TCGACAATAGGTGCGTTTCAAATA 59.070 37.500 0.00 0.00 0.00 1.40
7902 14433 5.062934 TCGACAATAGGTGCGTTTCAAATAG 59.937 40.000 0.00 0.00 0.00 1.73
7903 14434 5.560966 ACAATAGGTGCGTTTCAAATAGG 57.439 39.130 0.00 0.00 0.00 2.57
7904 14435 5.250200 ACAATAGGTGCGTTTCAAATAGGA 58.750 37.500 0.00 0.00 0.00 2.94
7905 14436 5.885912 ACAATAGGTGCGTTTCAAATAGGAT 59.114 36.000 0.00 0.00 0.00 3.24
7906 14437 6.038271 ACAATAGGTGCGTTTCAAATAGGATC 59.962 38.462 0.00 0.00 0.00 3.36
7907 14438 3.950397 AGGTGCGTTTCAAATAGGATCA 58.050 40.909 0.00 0.00 0.00 2.92
7984 14531 5.708877 TCTGGGTTTTATGTTTTTACCGG 57.291 39.130 0.00 0.00 0.00 5.28
8189 14745 5.303971 CACAAGAGGGGATCACTATGATTC 58.696 45.833 0.00 0.00 37.20 2.52
8237 14793 1.276622 ATGGGGGCGGTAGCTTATAG 58.723 55.000 0.00 0.00 44.37 1.31
8322 14879 3.871485 AGCTCTGCAGTAAAATCTCCAG 58.129 45.455 14.67 0.17 0.00 3.86
8407 14964 8.562052 CAATAAATAGTGCATTACAGAGCATCA 58.438 33.333 0.00 0.00 43.44 3.07
8408 14965 5.998454 AATAGTGCATTACAGAGCATCAC 57.002 39.130 0.00 0.00 43.44 3.06
8409 14966 3.623906 AGTGCATTACAGAGCATCACT 57.376 42.857 0.00 0.00 43.44 3.41
8410 14967 4.743057 AGTGCATTACAGAGCATCACTA 57.257 40.909 0.00 0.00 43.44 2.74
8411 14968 5.287674 AGTGCATTACAGAGCATCACTAT 57.712 39.130 0.00 0.00 43.44 2.12
8413 14970 6.219473 AGTGCATTACAGAGCATCACTATAC 58.781 40.000 0.00 0.00 43.44 1.47
8417 14974 7.231519 TGCATTACAGAGCATCACTATACTACT 59.768 37.037 0.00 0.00 37.82 2.57
8423 14980 9.804758 ACAGAGCATCACTATACTACTAAAAAC 57.195 33.333 0.00 0.00 37.82 2.43
8433 14990 9.639563 ACTATACTACTAAAAACTACTCCCTCC 57.360 37.037 0.00 0.00 0.00 4.30
8434 14991 5.911378 ACTACTAAAAACTACTCCCTCCG 57.089 43.478 0.00 0.00 0.00 4.63
8435 14992 5.328565 ACTACTAAAAACTACTCCCTCCGT 58.671 41.667 0.00 0.00 0.00 4.69
8436 14993 4.797800 ACTAAAAACTACTCCCTCCGTC 57.202 45.455 0.00 0.00 0.00 4.79
8437 14994 3.513119 ACTAAAAACTACTCCCTCCGTCC 59.487 47.826 0.00 0.00 0.00 4.79
8438 14995 1.273759 AAAACTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
8439 14996 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
8442 14999 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
8443 15000 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
8444 15001 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
8448 15005 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
8449 15006 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
8456 15013 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
8472 15029 1.961793 TTTTTGACACTGGGACGGAG 58.038 50.000 0.00 0.00 38.67 4.63
8473 15030 0.107831 TTTTGACACTGGGACGGAGG 59.892 55.000 0.00 0.00 38.67 4.30
8474 15031 1.764571 TTTGACACTGGGACGGAGGG 61.765 60.000 0.00 0.00 38.67 4.30
8476 15075 2.283966 ACACTGGGACGGAGGGAG 60.284 66.667 0.00 0.00 38.67 4.30
8548 15408 8.362464 GGTTTCCCCTTCTTTCTTATGTTAAT 57.638 34.615 0.00 0.00 0.00 1.40
8607 15467 1.518367 TCCTTGGTCACCTGGAGTTT 58.482 50.000 0.00 0.00 0.00 2.66
8656 15516 2.289569 GCCTTGCATTTTGATTGGTCCA 60.290 45.455 0.00 0.00 0.00 4.02
8915 15791 2.373224 TCTGATGCTCACAGAGACGAT 58.627 47.619 0.00 0.00 39.10 3.73
8955 15831 4.142687 CCAAAGGCGGTTAAATGTAGACAG 60.143 45.833 0.00 0.00 0.00 3.51
8956 15832 3.975168 AGGCGGTTAAATGTAGACAGT 57.025 42.857 0.00 0.00 0.00 3.55
9004 15880 6.413783 TTGAGATGAACTACACCACTTACA 57.586 37.500 0.00 0.00 0.00 2.41
9023 15899 3.725634 ACAGGGTAGCAATCTCCTAGTT 58.274 45.455 0.00 0.00 0.00 2.24
9074 18064 4.141551 TGGCTACTAGTGGAGACGAATAGA 60.142 45.833 10.90 0.00 0.00 1.98
9116 18106 2.910688 TGTGCTAGCTTAGGTATGGC 57.089 50.000 17.23 0.00 0.00 4.40
9176 18166 6.900568 AGAAAGATTTCATCGACACTGATC 57.099 37.500 7.97 0.00 39.61 2.92
9239 19185 6.287525 GGAGGGACAACAATTGATTTTTCAA 58.712 36.000 13.59 0.00 0.00 2.69
9301 19248 5.840693 TGGATATCAAGCCTAGATCTGTCAA 59.159 40.000 5.18 0.00 30.18 3.18
9309 19256 8.049117 TCAAGCCTAGATCTGTCAATTTTATGT 58.951 33.333 5.18 0.00 0.00 2.29
9310 19257 8.680903 CAAGCCTAGATCTGTCAATTTTATGTT 58.319 33.333 5.18 0.00 0.00 2.71
9311 19258 8.814038 AGCCTAGATCTGTCAATTTTATGTTT 57.186 30.769 5.18 0.00 0.00 2.83
9312 19259 9.247861 AGCCTAGATCTGTCAATTTTATGTTTT 57.752 29.630 5.18 0.00 0.00 2.43
9313 19260 9.860898 GCCTAGATCTGTCAATTTTATGTTTTT 57.139 29.630 5.18 0.00 0.00 1.94
9328 19275 9.581289 TTTTATGTTTTTATGAGACCTCTTCCA 57.419 29.630 0.00 0.00 0.00 3.53
9329 19276 9.581289 TTTATGTTTTTATGAGACCTCTTCCAA 57.419 29.630 0.00 0.00 0.00 3.53
9330 19277 9.753674 TTATGTTTTTATGAGACCTCTTCCAAT 57.246 29.630 0.00 0.00 0.00 3.16
9331 19278 7.452880 TGTTTTTATGAGACCTCTTCCAATG 57.547 36.000 0.00 0.00 0.00 2.82
9332 19279 6.071952 TGTTTTTATGAGACCTCTTCCAATGC 60.072 38.462 0.00 0.00 0.00 3.56
9333 19280 4.842531 TTATGAGACCTCTTCCAATGCA 57.157 40.909 0.00 0.00 0.00 3.96
9334 19281 3.726557 ATGAGACCTCTTCCAATGCAA 57.273 42.857 0.00 0.00 0.00 4.08
9335 19282 3.507162 TGAGACCTCTTCCAATGCAAA 57.493 42.857 0.00 0.00 0.00 3.68
9336 19283 3.415212 TGAGACCTCTTCCAATGCAAAG 58.585 45.455 0.00 0.00 0.00 2.77
9337 19284 2.751806 GAGACCTCTTCCAATGCAAAGG 59.248 50.000 0.00 0.00 0.00 3.11
9338 19285 2.108952 AGACCTCTTCCAATGCAAAGGT 59.891 45.455 7.57 4.39 39.76 3.50
9339 19286 2.229784 GACCTCTTCCAATGCAAAGGTG 59.770 50.000 7.57 3.35 37.26 4.00
9351 19298 1.986882 CAAAGGTGCTTGGAAGAGGT 58.013 50.000 0.00 0.00 0.00 3.85
9352 19299 1.610522 CAAAGGTGCTTGGAAGAGGTG 59.389 52.381 0.00 0.00 0.00 4.00
9353 19300 0.538287 AAGGTGCTTGGAAGAGGTGC 60.538 55.000 0.00 0.00 0.00 5.01
9354 19301 1.973812 GGTGCTTGGAAGAGGTGCC 60.974 63.158 0.00 0.00 0.00 5.01
9355 19302 1.228245 GTGCTTGGAAGAGGTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
9356 19303 0.823356 GTGCTTGGAAGAGGTGCCAA 60.823 55.000 0.00 0.00 41.61 4.52
9359 19306 3.419793 TTGGAAGAGGTGCCAAGTG 57.580 52.632 0.00 0.00 39.14 3.16
9360 19307 0.823356 TTGGAAGAGGTGCCAAGTGC 60.823 55.000 0.00 0.00 39.14 4.40
9402 19349 3.412386 ACCATGAGTGCCTTAACTTGTC 58.588 45.455 0.00 0.00 0.00 3.18
9403 19350 2.749621 CCATGAGTGCCTTAACTTGTCC 59.250 50.000 0.00 0.00 0.00 4.02
9413 19360 0.034337 TAACTTGTCCTGTGCGGTCC 59.966 55.000 0.00 0.00 0.00 4.46
9454 19411 2.717639 AGTGGTGCTTGAACTTGTCT 57.282 45.000 0.00 0.00 0.00 3.41
9459 19416 0.106769 TGCTTGAACTTGTCTGGGCA 60.107 50.000 0.00 0.00 0.00 5.36
9470 19427 1.094785 GTCTGGGCATGCAAATACGT 58.905 50.000 21.36 0.00 0.00 3.57
9471 19428 2.285083 GTCTGGGCATGCAAATACGTA 58.715 47.619 21.36 0.00 0.00 3.57
9472 19429 2.031683 GTCTGGGCATGCAAATACGTAC 59.968 50.000 21.36 2.46 0.00 3.67
9474 19431 0.306533 GGGCATGCAAATACGTACCG 59.693 55.000 21.36 0.00 0.00 4.02
9476 19433 2.203401 GGCATGCAAATACGTACCGTA 58.797 47.619 21.36 0.00 46.28 4.02
9565 19532 7.836183 AGAGCATTTTATTTATGACCAACTCCT 59.164 33.333 0.00 0.00 0.00 3.69
9604 19572 9.982291 AATTACACATAAATGTATGTCGTTGAC 57.018 29.630 5.50 0.00 46.01 3.18
9605 19573 6.417191 ACACATAAATGTATGTCGTTGACC 57.583 37.500 5.50 0.00 46.01 4.02
9609 19577 6.312918 ACATAAATGTATGTCGTTGACCTGTC 59.687 38.462 2.42 0.00 46.01 3.51
9611 19579 1.610038 TGTATGTCGTTGACCTGTCGT 59.390 47.619 0.00 0.00 0.00 4.34
9612 19580 2.034939 TGTATGTCGTTGACCTGTCGTT 59.965 45.455 0.00 0.00 0.00 3.85
9615 19583 0.580104 GTCGTTGACCTGTCGTTTGG 59.420 55.000 0.00 0.00 0.00 3.28
9643 19694 1.694150 CCTAGAGGGATTCGATGCCAA 59.306 52.381 6.43 0.00 44.23 4.52
9716 19767 4.314121 TGGCTGCATGTAATTGTTTTTCC 58.686 39.130 0.50 0.00 0.00 3.13
9857 19908 4.205587 GTCGTATTGAGGGAGACTTAGGA 58.794 47.826 0.00 0.00 0.00 2.94
9867 19918 6.844388 TGAGGGAGACTTAGGAAATATGCTAA 59.156 38.462 0.00 0.00 37.16 3.09
9887 19938 8.774890 TGCTAATGCATTTGACATAAAATTGT 57.225 26.923 22.55 0.00 45.31 2.71
9888 19939 9.866798 TGCTAATGCATTTGACATAAAATTGTA 57.133 25.926 22.55 0.00 45.31 2.41
9917 19968 8.710551 TGTATTTTTGAATGATGTTTGTCATGC 58.289 29.630 0.00 0.00 38.76 4.06
9918 19969 7.731882 ATTTTTGAATGATGTTTGTCATGCA 57.268 28.000 0.00 0.00 41.37 3.96
9919 19970 7.731882 TTTTTGAATGATGTTTGTCATGCAT 57.268 28.000 0.00 0.00 42.34 3.96
9920 19971 7.731882 TTTTGAATGATGTTTGTCATGCATT 57.268 28.000 0.00 0.00 42.34 3.56
9921 19972 6.954616 TTGAATGATGTTTGTCATGCATTC 57.045 33.333 0.00 0.00 42.34 2.67
9922 19973 6.026947 TGAATGATGTTTGTCATGCATTCA 57.973 33.333 19.04 19.04 45.21 2.57
9923 19974 6.456501 TGAATGATGTTTGTCATGCATTCAA 58.543 32.000 19.79 3.03 44.93 2.69
9924 19975 6.929606 TGAATGATGTTTGTCATGCATTCAAA 59.070 30.769 17.50 17.50 44.93 2.69
9925 19976 7.441458 TGAATGATGTTTGTCATGCATTCAAAA 59.559 29.630 20.98 14.53 44.93 2.44
9926 19977 7.731882 ATGATGTTTGTCATGCATTCAAAAA 57.268 28.000 20.98 18.07 37.44 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 48 8.134895 CACTGTATACCAACAAAATGTTCAGTT 58.865 33.333 0.00 0.00 38.77 3.16
123 129 9.111613 AGAAAAATTGTTCAGATTGCATTTGAA 57.888 25.926 10.98 0.00 0.00 2.69
245 377 4.035792 TCCCTGTGTACACAAAAATGTTCG 59.964 41.667 27.66 13.47 41.33 3.95
615 773 7.839358 GCTTCTGTTTTTCGTTTGTTATTTGTC 59.161 33.333 0.00 0.00 0.00 3.18
705 865 0.395724 AATGAACGGGATTGGGGAGC 60.396 55.000 0.00 0.00 0.00 4.70
787 947 3.446442 AGATTGCACCCTGAATTCTGT 57.554 42.857 7.05 0.00 0.00 3.41
792 952 2.224621 CCCGATAGATTGCACCCTGAAT 60.225 50.000 0.00 0.00 39.76 2.57
807 967 5.703730 ACCCTCAAGTTAAAATCCCGATA 57.296 39.130 0.00 0.00 0.00 2.92
809 969 4.202482 TGAACCCTCAAGTTAAAATCCCGA 60.202 41.667 0.00 0.00 0.00 5.14
819 979 1.534729 GCGGAATGAACCCTCAAGTT 58.465 50.000 0.00 0.00 34.49 2.66
992 1152 1.512734 GCGAACGCCATTTCTGCTG 60.513 57.895 8.03 0.00 34.56 4.41
1337 1503 1.152030 ACCTCACTGGGGAAGCTCA 60.152 57.895 0.42 0.00 41.11 4.26
1527 3167 0.746063 TCCACCTGCAGTGCAAAAAG 59.254 50.000 20.22 10.58 45.83 2.27
1566 3206 1.000607 GACACAGACCGTAAGAGCACA 60.001 52.381 0.00 0.00 43.02 4.57
1695 3338 2.814805 AATTGGGTGATGCAGCTACT 57.185 45.000 2.53 0.00 31.98 2.57
1705 3351 6.183360 GGAGTAGCTTATGACTAATTGGGTGA 60.183 42.308 0.00 0.00 0.00 4.02
1821 3467 9.869757 TGGATATTTCAATATGGACTACATACG 57.130 33.333 0.00 0.00 44.41 3.06
2016 3662 0.182537 CCTTGTGGTTGTGGGTCTGA 59.817 55.000 0.00 0.00 0.00 3.27
2059 3705 2.160813 AGCGCCCAAAATAAGTGTAACG 59.839 45.455 2.29 0.00 45.86 3.18
2060 3706 3.057806 ACAGCGCCCAAAATAAGTGTAAC 60.058 43.478 2.29 0.00 0.00 2.50
2063 3709 1.616159 ACAGCGCCCAAAATAAGTGT 58.384 45.000 2.29 0.00 0.00 3.55
2217 3895 5.617528 TGTTCACAGACTAAACCTACCAA 57.382 39.130 0.00 0.00 0.00 3.67
2218 3896 5.104859 TGTTGTTCACAGACTAAACCTACCA 60.105 40.000 0.00 0.00 0.00 3.25
2219 3897 5.235831 GTGTTGTTCACAGACTAAACCTACC 59.764 44.000 0.00 0.00 45.51 3.18
2233 3911 3.924073 GTCCACAAAAAGGTGTTGTTCAC 59.076 43.478 0.00 0.00 45.47 3.18
2234 3912 3.056465 GGTCCACAAAAAGGTGTTGTTCA 60.056 43.478 0.00 0.00 37.09 3.18
2235 3913 3.517602 GGTCCACAAAAAGGTGTTGTTC 58.482 45.455 0.00 0.00 37.09 3.18
2236 3914 2.235155 GGGTCCACAAAAAGGTGTTGTT 59.765 45.455 0.00 0.00 37.09 2.83
2237 3915 1.828595 GGGTCCACAAAAAGGTGTTGT 59.171 47.619 0.00 0.00 39.79 3.32
2238 3916 1.827969 TGGGTCCACAAAAAGGTGTTG 59.172 47.619 0.00 0.00 37.06 3.33
2239 3917 1.828595 GTGGGTCCACAAAAAGGTGTT 59.171 47.619 14.69 0.00 45.53 3.32
2240 3918 1.480789 GTGGGTCCACAAAAAGGTGT 58.519 50.000 14.69 0.00 45.53 4.16
2252 3930 2.676471 GTGTGGCCATGTGGGTCC 60.676 66.667 9.72 0.00 42.20 4.46
2259 3937 1.136695 ACAAAGTGTTGTGTGGCCATG 59.863 47.619 9.72 0.43 46.40 3.66
2261 3939 2.968737 ACAAAGTGTTGTGTGGCCA 58.031 47.368 0.00 0.00 46.40 5.36
2269 3947 5.181056 TGCTGATATGTGGTACAAAGTGTTG 59.819 40.000 0.00 0.00 44.16 3.33
2270 3948 5.312895 TGCTGATATGTGGTACAAAGTGTT 58.687 37.500 0.00 0.00 44.16 3.32
2271 3949 4.905429 TGCTGATATGTGGTACAAAGTGT 58.095 39.130 0.00 0.00 44.16 3.55
2272 3950 5.878332 TTGCTGATATGTGGTACAAAGTG 57.122 39.130 0.00 0.00 44.16 3.16
2273 3951 8.623903 CATATTTGCTGATATGTGGTACAAAGT 58.376 33.333 10.10 0.00 44.16 2.66
2274 3952 7.592533 GCATATTTGCTGATATGTGGTACAAAG 59.407 37.037 16.17 0.00 45.77 2.77
2275 3953 7.424803 GCATATTTGCTGATATGTGGTACAAA 58.575 34.615 16.17 0.00 45.77 2.83
2276 3954 6.969366 GCATATTTGCTGATATGTGGTACAA 58.031 36.000 16.17 0.00 45.77 2.41
2570 6872 7.950512 TGTGGTCAAAACATATTCTTCACAAT 58.049 30.769 0.00 0.00 0.00 2.71
2572 6874 6.016360 CCTGTGGTCAAAACATATTCTTCACA 60.016 38.462 0.00 0.00 0.00 3.58
2573 6875 6.381801 CCTGTGGTCAAAACATATTCTTCAC 58.618 40.000 0.00 0.00 0.00 3.18
2575 6877 5.183904 AGCCTGTGGTCAAAACATATTCTTC 59.816 40.000 0.00 0.00 0.00 2.87
2576 6878 5.079643 AGCCTGTGGTCAAAACATATTCTT 58.920 37.500 0.00 0.00 0.00 2.52
2577 6879 4.666512 AGCCTGTGGTCAAAACATATTCT 58.333 39.130 0.00 0.00 0.00 2.40
2578 6880 5.391312 AAGCCTGTGGTCAAAACATATTC 57.609 39.130 0.00 0.00 0.00 1.75
2580 6882 6.295067 GGTTTAAGCCTGTGGTCAAAACATAT 60.295 38.462 0.26 0.00 0.00 1.78
2582 6887 4.202212 GGTTTAAGCCTGTGGTCAAAACAT 60.202 41.667 0.26 0.00 0.00 2.71
2603 6908 1.610379 GCATGAAAAGGGGCAGGGT 60.610 57.895 0.00 0.00 0.00 4.34
2606 6911 1.259609 TGAAGCATGAAAAGGGGCAG 58.740 50.000 0.00 0.00 0.00 4.85
2607 6912 1.714541 TTGAAGCATGAAAAGGGGCA 58.285 45.000 0.00 0.00 0.00 5.36
2608 6913 2.837532 TTTGAAGCATGAAAAGGGGC 57.162 45.000 0.00 0.00 0.00 5.80
2609 6914 6.229733 TGTAAATTTGAAGCATGAAAAGGGG 58.770 36.000 0.00 0.00 0.00 4.79
2610 6915 7.910441 ATGTAAATTTGAAGCATGAAAAGGG 57.090 32.000 0.00 0.00 0.00 3.95
2611 6916 9.090692 CCTATGTAAATTTGAAGCATGAAAAGG 57.909 33.333 0.00 1.36 0.00 3.11
2613 6918 9.859427 CTCCTATGTAAATTTGAAGCATGAAAA 57.141 29.630 0.00 0.00 0.00 2.29
2617 6922 8.627403 ACATCTCCTATGTAAATTTGAAGCATG 58.373 33.333 0.00 0.00 0.00 4.06
2943 7252 9.088512 AGATATAAACATAAGTAAGCATAGCGC 57.911 33.333 0.00 0.00 42.91 5.92
2975 7284 5.227908 ACACTGTCGGAACACACTTTATAG 58.772 41.667 0.00 0.00 0.00 1.31
2979 7288 2.396590 ACACTGTCGGAACACACTTT 57.603 45.000 0.00 0.00 0.00 2.66
2980 7289 2.396590 AACACTGTCGGAACACACTT 57.603 45.000 0.00 0.00 0.00 3.16
2981 7290 2.802057 GCTAACACTGTCGGAACACACT 60.802 50.000 0.00 0.00 0.00 3.55
2983 7292 1.860676 GCTAACACTGTCGGAACACA 58.139 50.000 0.00 0.00 0.00 3.72
2984 7293 0.782384 CGCTAACACTGTCGGAACAC 59.218 55.000 0.00 0.00 0.00 3.32
2985 7294 0.942410 GCGCTAACACTGTCGGAACA 60.942 55.000 0.00 0.00 0.00 3.18
2986 7295 0.666577 AGCGCTAACACTGTCGGAAC 60.667 55.000 8.99 0.00 0.00 3.62
2987 7296 0.883153 TAGCGCTAACACTGTCGGAA 59.117 50.000 16.33 0.00 0.00 4.30
2988 7297 1.100510 ATAGCGCTAACACTGTCGGA 58.899 50.000 22.98 0.00 0.00 4.55
2989 7298 1.200483 CATAGCGCTAACACTGTCGG 58.800 55.000 22.98 0.00 0.00 4.79
2990 7299 0.572590 GCATAGCGCTAACACTGTCG 59.427 55.000 22.98 3.93 37.77 4.35
3001 7310 9.088512 AGATATAAACATAAGTAAGCATAGCGC 57.911 33.333 0.00 0.00 42.91 5.92
3032 7341 5.221382 ACACTGTCGGAACACACTTTATAGT 60.221 40.000 0.00 0.00 34.00 2.12
3033 7342 5.227908 ACACTGTCGGAACACACTTTATAG 58.772 41.667 0.00 0.00 0.00 1.31
3034 7343 5.204409 ACACTGTCGGAACACACTTTATA 57.796 39.130 0.00 0.00 0.00 0.98
3035 7344 4.067972 ACACTGTCGGAACACACTTTAT 57.932 40.909 0.00 0.00 0.00 1.40
3036 7345 3.530265 ACACTGTCGGAACACACTTTA 57.470 42.857 0.00 0.00 0.00 1.85
3037 7346 2.396590 ACACTGTCGGAACACACTTT 57.603 45.000 0.00 0.00 0.00 2.66
3038 7347 2.396590 AACACTGTCGGAACACACTT 57.603 45.000 0.00 0.00 0.00 3.16
3039 7348 2.802057 GCTAACACTGTCGGAACACACT 60.802 50.000 0.00 0.00 0.00 3.55
3040 7349 1.525619 GCTAACACTGTCGGAACACAC 59.474 52.381 0.00 0.00 0.00 3.82
3041 7350 1.860676 GCTAACACTGTCGGAACACA 58.139 50.000 0.00 0.00 0.00 3.72
3042 7351 0.782384 CGCTAACACTGTCGGAACAC 59.218 55.000 0.00 0.00 0.00 3.32
3043 7352 0.942410 GCGCTAACACTGTCGGAACA 60.942 55.000 0.00 0.00 0.00 3.18
3044 7353 0.666577 AGCGCTAACACTGTCGGAAC 60.667 55.000 8.99 0.00 0.00 3.62
3045 7354 0.883153 TAGCGCTAACACTGTCGGAA 59.117 50.000 16.33 0.00 0.00 4.30
3046 7355 0.883153 TTAGCGCTAACACTGTCGGA 59.117 50.000 25.53 0.00 0.00 4.55
3047 7356 1.588404 CATTAGCGCTAACACTGTCGG 59.412 52.381 30.92 10.04 0.00 4.79
3048 7357 2.259618 ACATTAGCGCTAACACTGTCG 58.740 47.619 30.92 15.30 0.00 4.35
3049 7358 4.663636 AAACATTAGCGCTAACACTGTC 57.336 40.909 30.92 0.00 0.00 3.51
3050 7359 4.755123 AGAAAACATTAGCGCTAACACTGT 59.245 37.500 30.92 26.35 0.00 3.55
3051 7360 5.283060 AGAAAACATTAGCGCTAACACTG 57.717 39.130 30.92 25.73 0.00 3.66
3052 7361 5.941948 AAGAAAACATTAGCGCTAACACT 57.058 34.783 30.92 18.98 0.00 3.55
3302 7611 3.826157 CTGGAAACAAGTCATGCCCTTTA 59.174 43.478 0.00 0.00 42.06 1.85
3303 7612 2.629617 CTGGAAACAAGTCATGCCCTTT 59.370 45.455 0.00 0.00 42.06 3.11
3444 7753 4.343526 ACATGCATGTTTTCCCTTTGTGTA 59.656 37.500 26.61 0.00 37.90 2.90
3454 7763 5.149273 CACAGAGTGTACATGCATGTTTTC 58.851 41.667 35.45 24.72 41.97 2.29
3515 7824 8.370266 ACTGATAACCACCTACATAACTACAA 57.630 34.615 0.00 0.00 0.00 2.41
3546 7855 2.489751 GGCCACCGTTTGCTATGC 59.510 61.111 0.00 0.00 0.00 3.14
3643 7952 7.338196 TCATGGTATAATGTGTGTTAACTTGGG 59.662 37.037 7.22 0.00 0.00 4.12
3700 8009 7.652909 CCAAAAATATATATGCAAGTGTGTGGG 59.347 37.037 0.00 0.00 0.00 4.61
3823 8133 2.593026 CTTAGTTTTCTTGGGGGTGCA 58.407 47.619 0.00 0.00 0.00 4.57
3831 8141 3.365767 GCCAGCAGAGCTTAGTTTTCTTG 60.366 47.826 0.00 0.00 36.40 3.02
3963 8278 0.463654 TGGAAGCAGTGAAACGCTGT 60.464 50.000 12.66 0.00 43.69 4.40
4096 8411 6.479660 ACAATGATTAAACAAAACCTGTGCTG 59.520 34.615 0.00 0.00 38.67 4.41
4145 8460 1.741770 CCTGAACGGTGGTAGCAGC 60.742 63.158 13.98 13.98 31.15 5.25
4275 8590 1.022735 GAGAAGGTCATGCATGCTGG 58.977 55.000 22.25 11.00 0.00 4.85
4402 8717 8.888579 ATGGACCGATATTTAGAAACTTGTAG 57.111 34.615 0.00 0.00 0.00 2.74
4648 8978 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4649 8979 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4650 8980 2.457366 TACACACACACACACACACA 57.543 45.000 0.00 0.00 0.00 3.72
4651 8981 5.007234 ACATTATACACACACACACACACAC 59.993 40.000 0.00 0.00 0.00 3.82
4652 8982 5.119694 ACATTATACACACACACACACACA 58.880 37.500 0.00 0.00 0.00 3.72
4653 8983 5.666969 ACATTATACACACACACACACAC 57.333 39.130 0.00 0.00 0.00 3.82
4654 8984 7.971183 AATACATTATACACACACACACACA 57.029 32.000 0.00 0.00 0.00 3.72
4746 9076 0.328258 AACTGGCTGGTGGTATGGAC 59.672 55.000 0.00 0.00 0.00 4.02
4970 9323 3.448660 GGGAAATGCCAGAAAAGCTACAT 59.551 43.478 0.00 0.00 38.95 2.29
5017 9370 9.722056 AATTTAGCTCAATACAATAAGAAAGCG 57.278 29.630 0.00 0.00 33.84 4.68
5302 9664 4.824537 TGAAAATGGAAACGGTGAAGATGA 59.175 37.500 0.00 0.00 0.00 2.92
5669 11807 9.855021 CAATTATTTTGAAACGGAGGTAGAATT 57.145 29.630 0.00 0.00 0.00 2.17
5670 11808 9.238368 TCAATTATTTTGAAACGGAGGTAGAAT 57.762 29.630 0.00 0.00 0.00 2.40
5672 11810 8.624367 TTCAATTATTTTGAAACGGAGGTAGA 57.376 30.769 0.00 0.00 35.69 2.59
5710 11848 6.787085 AACTTCAACGAGTCTGAATTAAGG 57.213 37.500 0.00 0.00 32.53 2.69
5716 11854 3.869246 GGTCAAACTTCAACGAGTCTGAA 59.131 43.478 0.00 0.00 29.09 3.02
5720 11858 3.002348 CCTTGGTCAAACTTCAACGAGTC 59.998 47.826 0.00 0.00 0.00 3.36
5724 11884 1.676006 AGCCTTGGTCAAACTTCAACG 59.324 47.619 0.00 0.00 0.00 4.10
5827 11987 7.067494 CCCCTTCACCAACTCTATAGAAAAATG 59.933 40.741 3.57 1.07 0.00 2.32
5828 11988 7.036863 TCCCCTTCACCAACTCTATAGAAAAAT 60.037 37.037 3.57 0.00 0.00 1.82
5829 11989 6.273730 TCCCCTTCACCAACTCTATAGAAAAA 59.726 38.462 3.57 0.00 0.00 1.94
5830 11990 5.788533 TCCCCTTCACCAACTCTATAGAAAA 59.211 40.000 3.57 0.00 0.00 2.29
5832 11992 4.955335 TCCCCTTCACCAACTCTATAGAA 58.045 43.478 3.57 0.00 0.00 2.10
5890 12057 0.458543 CTCGAACCCGTGACCTCATG 60.459 60.000 0.00 0.00 37.05 3.07
5891 12058 0.898789 ACTCGAACCCGTGACCTCAT 60.899 55.000 0.00 0.00 37.05 2.90
5892 12059 1.111116 AACTCGAACCCGTGACCTCA 61.111 55.000 0.00 0.00 37.05 3.86
5893 12060 0.388263 GAACTCGAACCCGTGACCTC 60.388 60.000 0.00 0.00 37.05 3.85
5894 12061 0.826672 AGAACTCGAACCCGTGACCT 60.827 55.000 0.00 0.00 37.05 3.85
5895 12062 0.666577 CAGAACTCGAACCCGTGACC 60.667 60.000 0.00 0.00 37.05 4.02
5896 12063 0.666577 CCAGAACTCGAACCCGTGAC 60.667 60.000 0.00 0.00 37.05 3.67
5897 12064 0.824595 TCCAGAACTCGAACCCGTGA 60.825 55.000 0.00 0.00 37.05 4.35
5898 12065 0.032952 TTCCAGAACTCGAACCCGTG 59.967 55.000 0.00 0.00 37.05 4.94
5899 12066 0.754472 TTTCCAGAACTCGAACCCGT 59.246 50.000 0.00 0.00 37.05 5.28
5900 12067 1.145803 GTTTCCAGAACTCGAACCCG 58.854 55.000 0.00 0.00 37.07 5.28
5901 12068 2.143925 CTGTTTCCAGAACTCGAACCC 58.856 52.381 0.00 0.00 41.50 4.11
5902 12069 1.531578 GCTGTTTCCAGAACTCGAACC 59.468 52.381 0.00 0.00 41.50 3.62
5903 12070 1.531578 GGCTGTTTCCAGAACTCGAAC 59.468 52.381 0.00 0.00 41.50 3.95
5904 12071 1.416401 AGGCTGTTTCCAGAACTCGAA 59.584 47.619 0.00 0.00 41.50 3.71
5905 12072 1.000955 GAGGCTGTTTCCAGAACTCGA 59.999 52.381 0.00 0.00 41.50 4.04
5906 12073 1.001406 AGAGGCTGTTTCCAGAACTCG 59.999 52.381 0.00 0.00 43.40 4.18
5907 12074 2.810852 CAAGAGGCTGTTTCCAGAACTC 59.189 50.000 0.00 0.00 41.50 3.01
5908 12075 2.856222 CAAGAGGCTGTTTCCAGAACT 58.144 47.619 0.00 0.00 41.50 3.01
5909 12076 1.268079 GCAAGAGGCTGTTTCCAGAAC 59.732 52.381 0.00 0.00 41.50 3.01
5910 12077 1.133823 TGCAAGAGGCTGTTTCCAGAA 60.134 47.619 0.00 0.00 45.15 3.02
5911 12078 0.473755 TGCAAGAGGCTGTTTCCAGA 59.526 50.000 0.00 0.00 45.15 3.86
5912 12079 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
5913 12080 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
5914 12081 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
5924 12091 4.335416 CCTTTCCCTACATTTCTGCAAGA 58.665 43.478 0.00 0.00 44.68 3.02
5925 12092 3.119352 GCCTTTCCCTACATTTCTGCAAG 60.119 47.826 0.00 0.00 0.00 4.01
5926 12093 2.825532 GCCTTTCCCTACATTTCTGCAA 59.174 45.455 0.00 0.00 0.00 4.08
5927 12094 2.041620 AGCCTTTCCCTACATTTCTGCA 59.958 45.455 0.00 0.00 0.00 4.41
5928 12095 2.424956 CAGCCTTTCCCTACATTTCTGC 59.575 50.000 0.00 0.00 0.00 4.26
5929 12096 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
5930 12097 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
5931 12098 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
5932 12099 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
5933 12100 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
5934 12101 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
5935 12102 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
5936 12103 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
5937 12104 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
5938 12105 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
5939 12106 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
5963 12130 2.082140 GGAAGGGTCCAACCACTTTT 57.918 50.000 0.00 0.00 44.26 2.27
5994 12161 1.305219 TGCATGTAGTTCCCGCTTGC 61.305 55.000 0.00 0.00 34.98 4.01
5999 12166 1.813753 CCGGTGCATGTAGTTCCCG 60.814 63.158 3.96 3.96 35.32 5.14
6004 12171 2.268920 CAGCCCGGTGCATGTAGT 59.731 61.111 15.92 0.00 44.83 2.73
6043 12210 8.911918 TCCATTAGTCAAACTTGCTTAAGTTA 57.088 30.769 4.02 0.00 41.76 2.24
6138 12305 4.143030 CCATCTACACTTCAGCTTTGTTCG 60.143 45.833 0.00 0.00 0.00 3.95
6233 12423 8.650143 ACAAAATTATTGAACAGAGGGTGTAT 57.350 30.769 7.18 0.00 39.03 2.29
6307 12536 7.062605 CAGAAACAGCATAGTATTGCCAAAAAG 59.937 37.037 0.00 0.00 43.83 2.27
6378 12611 4.398044 TCAAATGGTAAAGAAAGATCGCCC 59.602 41.667 0.00 0.00 0.00 6.13
6400 12633 2.757314 CCTGGGGAGCTTTCAATTCTTC 59.243 50.000 0.00 0.00 0.00 2.87
6452 12685 5.121142 GCTATTTGTAAGAAACACCACGCTA 59.879 40.000 0.00 0.00 38.00 4.26
6609 12843 5.220710 ACTAGATTGTTCACTGCTGAAGT 57.779 39.130 0.00 0.00 37.06 3.01
6610 12844 5.931146 AGAACTAGATTGTTCACTGCTGAAG 59.069 40.000 0.00 0.00 46.19 3.02
6611 12845 5.858381 AGAACTAGATTGTTCACTGCTGAA 58.142 37.500 0.00 0.00 46.19 3.02
6612 12846 5.474578 AGAACTAGATTGTTCACTGCTGA 57.525 39.130 0.00 0.00 46.19 4.26
6613 12847 7.600375 TCTTAAGAACTAGATTGTTCACTGCTG 59.400 37.037 1.68 0.00 46.19 4.41
6625 12859 9.674068 GGTTTCAAGGATTCTTAAGAACTAGAT 57.326 33.333 19.94 3.99 36.80 1.98
6680 12914 2.230992 TGCACATACCAAAATGCAGGAC 59.769 45.455 0.00 0.00 42.92 3.85
6754 12989 4.590850 AAGAGATTTCAGCCCAAACAAC 57.409 40.909 0.00 0.00 0.00 3.32
6936 13171 6.262944 TGCAAACTGACATCTGAGTGTTATTT 59.737 34.615 0.00 0.00 31.16 1.40
7093 13331 1.094785 CAAACACGGATGCCTTAGGG 58.905 55.000 0.00 0.00 0.00 3.53
7197 13455 5.163540 ACGTTGTTTAACTAAATGTTGGCCA 60.164 36.000 0.00 0.00 39.55 5.36
7219 13477 8.964150 TCGATCTGTATCATGTAATTTTACACG 58.036 33.333 5.34 0.00 45.47 4.49
7342 13601 6.480763 TGTAAGGCATCCTCAGTTTCAATAA 58.519 36.000 0.00 0.00 30.89 1.40
7354 13614 4.415596 TGTTTGGAATTGTAAGGCATCCT 58.584 39.130 0.00 0.00 33.87 3.24
7548 13813 9.709495 TTTGATAACAAAAGATTCAAAGGATGG 57.291 29.630 0.00 0.00 42.06 3.51
7795 14221 2.616634 TACGTACAAGCCCAAACACA 57.383 45.000 0.00 0.00 0.00 3.72
7843 14374 4.874966 TGTGCACTTCAAAAATTTCCCAAG 59.125 37.500 19.41 0.00 0.00 3.61
7882 14413 5.811399 TCCTATTTGAAACGCACCTATTG 57.189 39.130 0.00 0.00 0.00 1.90
7898 14429 8.806146 GCCAACCAAAACATATATGATCCTATT 58.194 33.333 19.63 4.33 0.00 1.73
7899 14430 7.397192 GGCCAACCAAAACATATATGATCCTAT 59.603 37.037 19.63 0.00 35.26 2.57
7900 14431 6.719370 GGCCAACCAAAACATATATGATCCTA 59.281 38.462 19.63 0.00 35.26 2.94
7901 14432 5.539955 GGCCAACCAAAACATATATGATCCT 59.460 40.000 19.63 0.00 35.26 3.24
7902 14433 5.539955 AGGCCAACCAAAACATATATGATCC 59.460 40.000 19.63 2.78 39.06 3.36
7903 14434 6.040842 ACAGGCCAACCAAAACATATATGATC 59.959 38.462 19.63 0.00 39.06 2.92
7904 14435 5.898972 ACAGGCCAACCAAAACATATATGAT 59.101 36.000 19.63 4.54 39.06 2.45
7905 14436 5.126869 CACAGGCCAACCAAAACATATATGA 59.873 40.000 19.63 0.00 39.06 2.15
7906 14437 5.350633 CACAGGCCAACCAAAACATATATG 58.649 41.667 11.29 11.29 39.06 1.78
7907 14438 4.141959 GCACAGGCCAACCAAAACATATAT 60.142 41.667 5.01 0.00 39.06 0.86
8167 14723 4.971282 TGAATCATAGTGATCCCCTCTTGT 59.029 41.667 0.00 0.00 35.76 3.16
8189 14745 5.300752 AGTCTTATGGTCACAGAAACAGTG 58.699 41.667 0.00 0.00 38.32 3.66
8322 14879 9.043079 GTAATAAACCTAGAAGCTACATGGAAC 57.957 37.037 0.00 0.00 0.00 3.62
8407 14964 9.639563 GGAGGGAGTAGTTTTTAGTAGTATAGT 57.360 37.037 0.00 0.00 0.00 2.12
8408 14965 8.782144 CGGAGGGAGTAGTTTTTAGTAGTATAG 58.218 40.741 0.00 0.00 0.00 1.31
8409 14966 8.275040 ACGGAGGGAGTAGTTTTTAGTAGTATA 58.725 37.037 0.00 0.00 0.00 1.47
8410 14967 7.122048 ACGGAGGGAGTAGTTTTTAGTAGTAT 58.878 38.462 0.00 0.00 0.00 2.12
8411 14968 6.485171 ACGGAGGGAGTAGTTTTTAGTAGTA 58.515 40.000 0.00 0.00 0.00 1.82
8413 14970 5.163571 GGACGGAGGGAGTAGTTTTTAGTAG 60.164 48.000 0.00 0.00 0.00 2.57
8417 14974 2.833943 GGGACGGAGGGAGTAGTTTTTA 59.166 50.000 0.00 0.00 0.00 1.52
8422 14979 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
8423 14980 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
8427 14984 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
8428 14985 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
8429 14986 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
8456 15013 2.214216 CCCTCCGTCCCAGTGTCAA 61.214 63.158 0.00 0.00 0.00 3.18
8457 15014 2.603473 CCCTCCGTCCCAGTGTCA 60.603 66.667 0.00 0.00 0.00 3.58
8458 15015 2.283676 TCCCTCCGTCCCAGTGTC 60.284 66.667 0.00 0.00 0.00 3.67
8459 15016 1.797018 TACTCCCTCCGTCCCAGTGT 61.797 60.000 0.00 0.00 0.00 3.55
8461 15018 0.338814 ATTACTCCCTCCGTCCCAGT 59.661 55.000 0.00 0.00 0.00 4.00
8462 15019 1.497161 AATTACTCCCTCCGTCCCAG 58.503 55.000 0.00 0.00 0.00 4.45
8463 15020 2.852714 TAATTACTCCCTCCGTCCCA 57.147 50.000 0.00 0.00 0.00 4.37
8464 15021 6.370186 AATATTAATTACTCCCTCCGTCCC 57.630 41.667 0.00 0.00 0.00 4.46
8465 15022 6.013984 TGGAATATTAATTACTCCCTCCGTCC 60.014 42.308 0.00 0.00 0.00 4.79
8466 15023 7.001099 TGGAATATTAATTACTCCCTCCGTC 57.999 40.000 0.00 0.00 0.00 4.79
8468 15025 7.097834 GTCTGGAATATTAATTACTCCCTCCG 58.902 42.308 0.00 0.00 0.00 4.63
8469 15026 7.974504 TGTCTGGAATATTAATTACTCCCTCC 58.025 38.462 0.00 0.00 0.00 4.30
8548 15408 4.164796 ACAGGACATAGATTTGGAGATGCA 59.835 41.667 0.00 0.00 0.00 3.96
8760 15621 4.445718 CGTGCCATATAGTACTTTCTGCAG 59.554 45.833 7.63 7.63 0.00 4.41
8915 15791 4.873827 CCTTTGGTCGATTTCTTATCGGAA 59.126 41.667 7.25 0.00 41.45 4.30
8978 15854 7.771361 TGTAAGTGGTGTAGTTCATCTCAAAAA 59.229 33.333 0.00 0.00 0.00 1.94
8979 15855 7.276658 TGTAAGTGGTGTAGTTCATCTCAAAA 58.723 34.615 0.00 0.00 0.00 2.44
8980 15856 6.822442 TGTAAGTGGTGTAGTTCATCTCAAA 58.178 36.000 0.00 0.00 0.00 2.69
8981 15857 6.413783 TGTAAGTGGTGTAGTTCATCTCAA 57.586 37.500 0.00 0.00 0.00 3.02
8982 15858 5.047306 CCTGTAAGTGGTGTAGTTCATCTCA 60.047 44.000 0.00 0.00 0.00 3.27
9004 15880 6.689177 GCATAAAACTAGGAGATTGCTACCCT 60.689 42.308 0.00 0.00 0.00 4.34
9023 15899 4.101114 TCTACTCCTGGAACCAGCATAAA 58.899 43.478 14.66 0.00 42.35 1.40
9060 18050 6.149640 TCAGTATGCTATCTATTCGTCTCCAC 59.850 42.308 0.00 0.00 34.76 4.02
9074 18064 5.262588 TGATGAACACGTCAGTATGCTAT 57.737 39.130 0.00 0.00 40.43 2.97
9116 18106 2.871022 CAATGAAGGCCAAGAGATCTCG 59.129 50.000 16.97 4.47 34.09 4.04
9176 18166 5.462068 TGAAACTGAGAAGACGTACAATGTG 59.538 40.000 0.00 0.00 0.00 3.21
9239 19185 5.560966 AAACAGTCAAGTCGTCATTGTTT 57.439 34.783 0.00 0.00 33.78 2.83
9309 19256 6.009589 TGCATTGGAAGAGGTCTCATAAAAA 58.990 36.000 0.55 0.00 0.00 1.94
9310 19257 5.569355 TGCATTGGAAGAGGTCTCATAAAA 58.431 37.500 0.55 0.00 0.00 1.52
9311 19258 5.178096 TGCATTGGAAGAGGTCTCATAAA 57.822 39.130 0.55 0.00 0.00 1.40
9312 19259 4.842531 TGCATTGGAAGAGGTCTCATAA 57.157 40.909 0.55 0.00 0.00 1.90
9313 19260 4.842531 TTGCATTGGAAGAGGTCTCATA 57.157 40.909 0.55 0.00 0.00 2.15
9314 19261 3.726557 TTGCATTGGAAGAGGTCTCAT 57.273 42.857 0.55 0.00 0.00 2.90
9315 19262 3.415212 CTTTGCATTGGAAGAGGTCTCA 58.585 45.455 0.55 0.00 0.00 3.27
9316 19263 2.751806 CCTTTGCATTGGAAGAGGTCTC 59.248 50.000 0.00 0.00 0.00 3.36
9317 19264 2.108952 ACCTTTGCATTGGAAGAGGTCT 59.891 45.455 14.47 0.61 32.25 3.85
9318 19265 2.229784 CACCTTTGCATTGGAAGAGGTC 59.770 50.000 16.22 0.00 35.43 3.85
9319 19266 2.242043 CACCTTTGCATTGGAAGAGGT 58.758 47.619 14.47 14.47 37.98 3.85
9332 19279 1.610522 CACCTCTTCCAAGCACCTTTG 59.389 52.381 0.00 0.00 0.00 2.77
9333 19280 1.986882 CACCTCTTCCAAGCACCTTT 58.013 50.000 0.00 0.00 0.00 3.11
9334 19281 0.538287 GCACCTCTTCCAAGCACCTT 60.538 55.000 0.00 0.00 0.00 3.50
9335 19282 1.073897 GCACCTCTTCCAAGCACCT 59.926 57.895 0.00 0.00 0.00 4.00
9336 19283 1.973812 GGCACCTCTTCCAAGCACC 60.974 63.158 0.00 0.00 0.00 5.01
9337 19284 0.823356 TTGGCACCTCTTCCAAGCAC 60.823 55.000 0.00 0.00 37.43 4.40
9338 19285 1.536180 TTGGCACCTCTTCCAAGCA 59.464 52.632 0.00 0.00 37.43 3.91
9339 19286 4.500265 TTGGCACCTCTTCCAAGC 57.500 55.556 0.00 0.00 37.43 4.01
9341 19288 0.823356 GCACTTGGCACCTCTTCCAA 60.823 55.000 0.00 0.00 43.97 3.53
9342 19289 1.228245 GCACTTGGCACCTCTTCCA 60.228 57.895 0.00 0.00 43.97 3.53
9343 19290 3.673599 GCACTTGGCACCTCTTCC 58.326 61.111 0.00 0.00 43.97 3.46
9352 19299 8.980143 TTTAACTCTTATTTAATGCACTTGGC 57.020 30.769 0.00 0.00 45.13 4.52
9366 19313 9.726438 GGCACTCATGGTATATTTAACTCTTAT 57.274 33.333 0.00 0.00 0.00 1.73
9367 19314 8.934697 AGGCACTCATGGTATATTTAACTCTTA 58.065 33.333 0.00 0.00 0.00 2.10
9380 19327 4.564821 GGACAAGTTAAGGCACTCATGGTA 60.565 45.833 0.00 0.00 38.49 3.25
9384 19331 3.073062 ACAGGACAAGTTAAGGCACTCAT 59.927 43.478 0.00 0.00 38.49 2.90
9385 19332 2.438021 ACAGGACAAGTTAAGGCACTCA 59.562 45.455 0.00 0.00 38.49 3.41
9403 19350 1.878953 ACAACTTTAGGACCGCACAG 58.121 50.000 0.00 0.00 0.00 3.66
9454 19411 1.384525 GGTACGTATTTGCATGCCCA 58.615 50.000 16.68 1.02 0.00 5.36
9470 19427 4.689071 CAAGGCATACACTGAATACGGTA 58.311 43.478 0.00 0.00 33.89 4.02
9471 19428 3.531538 CAAGGCATACACTGAATACGGT 58.468 45.455 0.00 0.00 35.84 4.83
9472 19429 2.287915 GCAAGGCATACACTGAATACGG 59.712 50.000 0.00 0.00 0.00 4.02
9474 19431 2.618709 GGGCAAGGCATACACTGAATAC 59.381 50.000 0.00 0.00 0.00 1.89
9476 19433 1.005805 TGGGCAAGGCATACACTGAAT 59.994 47.619 0.00 0.00 0.00 2.57
9477 19434 0.403655 TGGGCAAGGCATACACTGAA 59.596 50.000 0.00 0.00 0.00 3.02
9479 19436 0.742505 CATGGGCAAGGCATACACTG 59.257 55.000 0.00 0.00 0.00 3.66
9480 19437 0.332632 ACATGGGCAAGGCATACACT 59.667 50.000 0.00 0.00 0.00 3.55
9504 19471 3.493830 GACCGTCGACACACTGGCA 62.494 63.158 17.16 0.00 0.00 4.92
9510 19477 1.198408 GACATGTAGACCGTCGACACA 59.802 52.381 17.16 12.12 34.94 3.72
9514 19481 2.750712 TCATTGACATGTAGACCGTCGA 59.249 45.455 0.00 0.00 32.17 4.20
9597 19565 0.531090 CCCAAACGACAGGTCAACGA 60.531 55.000 0.00 0.00 0.00 3.85
9599 19567 0.179040 TCCCCAAACGACAGGTCAAC 60.179 55.000 0.00 0.00 0.00 3.18
9601 19569 1.338890 TGTCCCCAAACGACAGGTCA 61.339 55.000 0.00 0.00 35.35 4.02
9602 19570 1.448497 TGTCCCCAAACGACAGGTC 59.552 57.895 0.00 0.00 35.35 3.85
9603 19571 3.650023 TGTCCCCAAACGACAGGT 58.350 55.556 0.00 0.00 35.35 4.00
9609 19577 1.078426 CTAGGCCTGTCCCCAAACG 60.078 63.158 17.99 0.00 34.51 3.60
9611 19579 0.914417 CCTCTAGGCCTGTCCCCAAA 60.914 60.000 17.99 0.00 34.51 3.28
9612 19580 1.306997 CCTCTAGGCCTGTCCCCAA 60.307 63.158 17.99 0.00 34.51 4.12
9615 19583 0.400670 AATCCCTCTAGGCCTGTCCC 60.401 60.000 17.99 0.00 34.51 4.46
9621 19672 0.036858 GCATCGAATCCCTCTAGGCC 60.037 60.000 0.00 0.00 34.51 5.19
9643 19694 1.456296 ATGTTGTGCATGCGATGTCT 58.544 45.000 14.09 0.00 36.26 3.41
9675 19726 1.198408 CATGCTTGGTGTAGTGCAGTG 59.802 52.381 3.69 0.00 38.87 3.66
9679 19730 0.962356 AGCCATGCTTGGTGTAGTGC 60.962 55.000 19.05 3.88 45.57 4.40
9716 19767 4.562789 CACACACACGACATCCAGTATTAG 59.437 45.833 0.00 0.00 0.00 1.73
9757 19808 7.866898 CACCAAACAGATAAATTGTCATTGACA 59.133 33.333 15.41 15.41 41.09 3.58
9824 19875 4.513692 CCCTCAATACGACAACAAGTGAAA 59.486 41.667 0.00 0.00 0.00 2.69
9835 19886 4.205587 TCCTAAGTCTCCCTCAATACGAC 58.794 47.826 0.00 0.00 0.00 4.34
9891 19942 8.710551 GCATGACAAACATCATTCAAAAATACA 58.289 29.630 0.00 0.00 37.20 2.29
9892 19943 8.710551 TGCATGACAAACATCATTCAAAAATAC 58.289 29.630 0.00 0.00 37.20 1.89
9893 19944 8.828688 TGCATGACAAACATCATTCAAAAATA 57.171 26.923 0.00 0.00 37.20 1.40
9894 19945 7.731882 TGCATGACAAACATCATTCAAAAAT 57.268 28.000 0.00 0.00 37.20 1.82
9895 19946 7.731882 ATGCATGACAAACATCATTCAAAAA 57.268 28.000 0.00 0.00 36.13 1.94
9896 19947 7.441458 TGAATGCATGACAAACATCATTCAAAA 59.559 29.630 20.70 9.55 45.77 2.44
9897 19948 6.929606 TGAATGCATGACAAACATCATTCAAA 59.070 30.769 20.70 9.94 45.77 2.69
9898 19949 6.456501 TGAATGCATGACAAACATCATTCAA 58.543 32.000 20.70 12.63 45.77 2.69
9899 19950 6.026947 TGAATGCATGACAAACATCATTCA 57.973 33.333 19.96 19.96 46.06 2.57
9900 19951 6.954616 TTGAATGCATGACAAACATCATTC 57.045 33.333 14.42 17.34 43.53 2.67
9901 19952 7.731882 TTTTGAATGCATGACAAACATCATT 57.268 28.000 22.95 0.00 37.20 2.57
9902 19953 7.731882 TTTTTGAATGCATGACAAACATCAT 57.268 28.000 22.95 0.00 40.03 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.