Multiple sequence alignment - TraesCS1B01G197100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G197100 chr1B 100.000 6389 0 0 1 6389 354546549 354540161 0.000000e+00 11799.0
1 TraesCS1B01G197100 chr1B 88.817 769 54 21 988 1732 354660688 354659928 0.000000e+00 915.0
2 TraesCS1B01G197100 chr1B 85.490 827 80 19 2394 3206 354657937 354657137 0.000000e+00 826.0
3 TraesCS1B01G197100 chr1B 86.684 751 82 9 3915 4653 354656532 354655788 0.000000e+00 817.0
4 TraesCS1B01G197100 chr1B 89.157 498 47 5 3270 3763 354657135 354656641 1.180000e-171 614.0
5 TraesCS1B01G197100 chr1B 78.835 704 74 37 1732 2402 354659982 354659321 7.710000e-109 405.0
6 TraesCS1B01G197100 chr1B 83.855 415 37 13 60 449 640878528 640878119 1.010000e-97 368.0
7 TraesCS1B01G197100 chr1B 86.905 336 32 10 4762 5097 354655760 354655437 3.640000e-97 366.0
8 TraesCS1B01G197100 chr1B 81.731 416 53 15 48 453 688981976 688981574 6.180000e-85 326.0
9 TraesCS1B01G197100 chr1B 93.671 158 9 1 454 610 688981545 688981388 1.070000e-57 235.0
10 TraesCS1B01G197100 chr1B 91.837 147 12 0 791 937 200649087 200649233 8.400000e-49 206.0
11 TraesCS1B01G197100 chr1D 93.859 1726 50 20 981 2671 258356294 258357998 0.000000e+00 2549.0
12 TraesCS1B01G197100 chr1D 95.432 1226 42 9 2698 3917 258357985 258359202 0.000000e+00 1941.0
13 TraesCS1B01G197100 chr1D 92.378 1207 52 11 3915 5121 258359244 258360410 0.000000e+00 1683.0
14 TraesCS1B01G197100 chr1D 94.802 1058 51 4 5332 6387 45714649 45713594 0.000000e+00 1646.0
15 TraesCS1B01G197100 chr1D 88.586 771 58 19 985 1732 258346049 258346812 0.000000e+00 909.0
16 TraesCS1B01G197100 chr1D 87.408 683 75 9 3975 4653 258351582 258352257 0.000000e+00 774.0
17 TraesCS1B01G197100 chr1D 84.556 777 75 20 2464 3225 258349996 258350742 0.000000e+00 728.0
18 TraesCS1B01G197100 chr1D 88.145 523 55 5 3227 3745 258350860 258351379 3.270000e-172 616.0
19 TraesCS1B01G197100 chr1D 95.122 82 4 0 5147 5228 258360397 258360478 5.200000e-26 130.0
20 TraesCS1B01G197100 chr1A 93.468 1730 63 17 981 2671 342878950 342877232 0.000000e+00 2523.0
21 TraesCS1B01G197100 chr1A 95.673 1225 39 4 2698 3917 342877245 342876030 0.000000e+00 1956.0
22 TraesCS1B01G197100 chr1A 95.130 965 44 3 4264 5228 342875710 342874749 0.000000e+00 1519.0
23 TraesCS1B01G197100 chr1A 88.457 771 53 18 991 1732 343394994 343394231 0.000000e+00 898.0
24 TraesCS1B01G197100 chr1A 86.613 747 86 9 3915 4653 343391029 343390289 0.000000e+00 813.0
25 TraesCS1B01G197100 chr1A 88.668 653 67 5 3270 3917 343391721 343391071 0.000000e+00 789.0
26 TraesCS1B01G197100 chr1A 84.401 827 84 19 2394 3206 343392518 343391723 0.000000e+00 771.0
27 TraesCS1B01G197100 chr1A 80.552 689 78 25 1732 2402 343394285 343393635 4.480000e-131 479.0
28 TraesCS1B01G197100 chr1A 88.251 383 33 7 4762 5144 343390261 343389891 1.260000e-121 448.0
29 TraesCS1B01G197100 chr1A 87.460 311 17 4 3915 4224 342875997 342875708 7.930000e-89 339.0
30 TraesCS1B01G197100 chr4D 95.377 1060 43 6 5332 6389 375436050 375437105 0.000000e+00 1681.0
31 TraesCS1B01G197100 chr5B 94.712 1059 50 4 5332 6389 84886361 84887414 0.000000e+00 1640.0
32 TraesCS1B01G197100 chr5B 80.361 443 53 23 188 603 487910836 487911271 8.050000e-79 305.0
33 TraesCS1B01G197100 chr5B 89.032 155 17 0 786 940 486034099 486033945 6.540000e-45 193.0
34 TraesCS1B01G197100 chr7D 94.334 1059 57 3 5332 6389 442769980 442768924 0.000000e+00 1620.0
35 TraesCS1B01G197100 chr7D 90.604 149 11 2 466 611 549364844 549364992 1.820000e-45 195.0
36 TraesCS1B01G197100 chr7D 94.382 89 4 1 516 603 147991680 147991768 1.120000e-27 135.0
37 TraesCS1B01G197100 chr7B 94.173 1064 53 5 5332 6389 460546783 460545723 0.000000e+00 1613.0
38 TraesCS1B01G197100 chr7B 94.085 1065 54 4 5332 6389 511318785 511317723 0.000000e+00 1609.0
39 TraesCS1B01G197100 chr7B 90.698 129 9 2 790 915 633320191 633320063 1.100000e-37 169.0
40 TraesCS1B01G197100 chr3A 93.703 1064 59 4 5332 6389 749157769 749156708 0.000000e+00 1587.0
41 TraesCS1B01G197100 chrUn 93.691 1062 56 9 5332 6389 33158435 33159489 0.000000e+00 1580.0
42 TraesCS1B01G197100 chr4A 93.591 1061 63 4 5332 6389 12191773 12192831 0.000000e+00 1578.0
43 TraesCS1B01G197100 chr4A 91.558 154 13 0 787 940 725273571 725273418 5.020000e-51 213.0
44 TraesCS1B01G197100 chr4A 92.537 67 5 0 5271 5337 544409814 544409880 5.270000e-16 97.1
45 TraesCS1B01G197100 chr2B 90.330 455 20 10 1 453 706566356 706566788 5.560000e-160 575.0
46 TraesCS1B01G197100 chr2B 96.226 159 5 1 455 612 706566971 706567129 6.350000e-65 259.0
47 TraesCS1B01G197100 chr2B 93.421 152 10 0 786 937 774368948 774369099 6.450000e-55 226.0
48 TraesCS1B01G197100 chr2B 91.447 152 13 0 786 937 38372862 38373013 6.490000e-50 209.0
49 TraesCS1B01G197100 chr2B 96.330 109 4 0 829 937 606482923 606483031 5.090000e-41 180.0
50 TraesCS1B01G197100 chr6A 87.309 457 45 9 1 449 86535012 86535463 1.590000e-140 510.0
51 TraesCS1B01G197100 chr6A 90.123 162 15 1 456 616 86535498 86535659 6.490000e-50 209.0
52 TraesCS1B01G197100 chr6A 88.462 130 15 0 3519 3648 233345052 233345181 2.380000e-34 158.0
53 TraesCS1B01G197100 chr6A 88.991 109 12 0 5229 5337 97696136 97696244 1.120000e-27 135.0
54 TraesCS1B01G197100 chr6B 84.165 461 49 13 1 438 682667143 682667602 5.920000e-115 425.0
55 TraesCS1B01G197100 chr6B 85.025 394 46 10 68 453 309271851 309272239 7.770000e-104 388.0
56 TraesCS1B01G197100 chr6B 91.304 161 11 3 451 610 309272265 309272423 3.880000e-52 217.0
57 TraesCS1B01G197100 chr6B 92.308 65 4 1 1 65 309271823 309271886 2.450000e-14 91.6
58 TraesCS1B01G197100 chr5D 78.315 641 88 34 1 603 406833900 406834527 3.640000e-97 366.0
59 TraesCS1B01G197100 chr5D 88.073 109 7 6 5232 5337 552376395 552376290 2.420000e-24 124.0
60 TraesCS1B01G197100 chr5A 77.513 587 86 36 49 603 512445202 512445774 1.730000e-80 311.0
61 TraesCS1B01G197100 chr5A 93.506 154 10 0 610 763 313581364 313581517 4.980000e-56 230.0
62 TraesCS1B01G197100 chr5A 93.750 112 7 0 829 940 343767300 343767189 1.100000e-37 169.0
63 TraesCS1B01G197100 chr5A 82.000 150 10 3 788 937 313581504 313581636 1.880000e-20 111.0
64 TraesCS1B01G197100 chr3D 76.535 635 87 45 10 603 102647503 102648116 2.250000e-74 291.0
65 TraesCS1B01G197100 chr3B 78.824 340 49 21 1 329 506731863 506732190 2.330000e-49 207.0
66 TraesCS1B01G197100 chr3B 89.103 156 7 1 822 967 568561111 568560956 1.090000e-42 185.0
67 TraesCS1B01G197100 chr3B 86.364 110 13 2 5229 5337 534174592 534174700 1.130000e-22 119.0
68 TraesCS1B01G197100 chr3B 92.537 67 4 1 5272 5337 14696106 14696040 1.900000e-15 95.3
69 TraesCS1B01G197100 chr3B 92.537 67 4 1 5272 5337 14701440 14701374 1.900000e-15 95.3
70 TraesCS1B01G197100 chr6D 90.789 152 12 2 612 763 50203186 50203037 1.090000e-47 202.0
71 TraesCS1B01G197100 chr2A 86.207 116 12 4 5225 5337 543604954 543605068 8.700000e-24 122.0
72 TraesCS1B01G197100 chr2A 86.607 112 11 4 5229 5337 543619226 543619336 3.130000e-23 121.0
73 TraesCS1B01G197100 chr4B 92.537 67 4 1 5272 5337 114569937 114569871 1.900000e-15 95.3
74 TraesCS1B01G197100 chr7A 96.970 33 1 0 1847 1879 148481500 148481468 8.950000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G197100 chr1B 354540161 354546549 6388 True 11799.000000 11799 100.000000 1 6389 1 chr1B.!!$R1 6388
1 TraesCS1B01G197100 chr1B 354655437 354660688 5251 True 657.166667 915 85.981333 988 5097 6 chr1B.!!$R3 4109
2 TraesCS1B01G197100 chr1B 688981388 688981976 588 True 280.500000 326 87.701000 48 610 2 chr1B.!!$R4 562
3 TraesCS1B01G197100 chr1D 45713594 45714649 1055 True 1646.000000 1646 94.802000 5332 6387 1 chr1D.!!$R1 1055
4 TraesCS1B01G197100 chr1D 258356294 258360478 4184 False 1575.750000 2549 94.197750 981 5228 4 chr1D.!!$F2 4247
5 TraesCS1B01G197100 chr1D 258346049 258352257 6208 False 756.750000 909 87.173750 985 4653 4 chr1D.!!$F1 3668
6 TraesCS1B01G197100 chr1A 342874749 342878950 4201 True 1584.250000 2523 92.932750 981 5228 4 chr1A.!!$R1 4247
7 TraesCS1B01G197100 chr1A 343389891 343394994 5103 True 699.666667 898 86.157000 991 5144 6 chr1A.!!$R2 4153
8 TraesCS1B01G197100 chr4D 375436050 375437105 1055 False 1681.000000 1681 95.377000 5332 6389 1 chr4D.!!$F1 1057
9 TraesCS1B01G197100 chr5B 84886361 84887414 1053 False 1640.000000 1640 94.712000 5332 6389 1 chr5B.!!$F1 1057
10 TraesCS1B01G197100 chr7D 442768924 442769980 1056 True 1620.000000 1620 94.334000 5332 6389 1 chr7D.!!$R1 1057
11 TraesCS1B01G197100 chr7B 460545723 460546783 1060 True 1613.000000 1613 94.173000 5332 6389 1 chr7B.!!$R1 1057
12 TraesCS1B01G197100 chr7B 511317723 511318785 1062 True 1609.000000 1609 94.085000 5332 6389 1 chr7B.!!$R2 1057
13 TraesCS1B01G197100 chr3A 749156708 749157769 1061 True 1587.000000 1587 93.703000 5332 6389 1 chr3A.!!$R1 1057
14 TraesCS1B01G197100 chrUn 33158435 33159489 1054 False 1580.000000 1580 93.691000 5332 6389 1 chrUn.!!$F1 1057
15 TraesCS1B01G197100 chr4A 12191773 12192831 1058 False 1578.000000 1578 93.591000 5332 6389 1 chr4A.!!$F1 1057
16 TraesCS1B01G197100 chr2B 706566356 706567129 773 False 417.000000 575 93.278000 1 612 2 chr2B.!!$F4 611
17 TraesCS1B01G197100 chr6A 86535012 86535659 647 False 359.500000 510 88.716000 1 616 2 chr6A.!!$F3 615
18 TraesCS1B01G197100 chr6B 309271823 309272423 600 False 232.200000 388 89.545667 1 610 3 chr6B.!!$F2 609
19 TraesCS1B01G197100 chr5D 406833900 406834527 627 False 366.000000 366 78.315000 1 603 1 chr5D.!!$F1 602
20 TraesCS1B01G197100 chr5A 512445202 512445774 572 False 311.000000 311 77.513000 49 603 1 chr5A.!!$F1 554
21 TraesCS1B01G197100 chr3D 102647503 102648116 613 False 291.000000 291 76.535000 10 603 1 chr3D.!!$F1 593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
750 1183 0.034337 ACAAAAGCCCTCGTTCGCTA 59.966 50.000 0.00 0.00 34.11 4.26 F
822 1255 0.108520 TCGTATGAGGCGTTTGTCCC 60.109 55.000 0.00 0.00 0.00 4.46 F
1671 2140 0.175302 CAGCAGAAGTCCAGCGAGAT 59.825 55.000 0.00 0.00 0.00 2.75 F
1719 2189 0.744414 TCAGCGTGCATTTCTAGCCC 60.744 55.000 0.00 0.00 0.00 5.19 F
2678 6929 1.079612 GGGCTGTTTCAAGCATGCC 60.080 57.895 15.66 6.27 45.43 4.40 F
4116 8628 1.302366 TGTCAGCTCAACTTGCAGTG 58.698 50.000 0.00 0.00 0.00 3.66 F
5202 9764 0.454957 CCGTGTATGCACTTGCTTGC 60.455 55.000 12.30 0.58 43.16 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1739 2209 0.107508 CGCTGAATCAGACCATGGGT 60.108 55.000 18.09 0.99 39.44 4.51 R
2677 6928 0.901827 GTTAAAACCATGGGCCAGGG 59.098 55.000 34.29 34.29 41.50 4.45 R
3512 7888 1.005215 ACAATCAGAGGGGCAGAAAGG 59.995 52.381 0.00 0.00 0.00 3.11 R
3691 8068 3.074412 GGTCAGTGATGTTAACACAGGG 58.926 50.000 11.22 6.57 40.25 4.45 R
4123 8635 0.038744 CAACAGAAGGATGGCCCACT 59.961 55.000 0.00 0.00 37.41 4.00 R
5323 9885 0.035056 GCATACCTGCTCAACACCCT 60.035 55.000 0.00 0.00 45.32 4.34 R
6115 10685 1.463444 GATGCTTACGTTCAGCGGTTT 59.537 47.619 13.13 0.95 46.52 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 54 6.793479 TTGAAAAACGTTCACGGATAAAAC 57.207 33.333 0.00 0.00 44.95 2.43
181 341 8.567221 GTTCATCGATTTTCATAAAAGTTCACG 58.433 33.333 0.00 0.00 33.22 4.35
359 587 8.267183 AGAAAAAGTTCATCAAACCAGGAAAAT 58.733 29.630 0.00 0.00 38.76 1.82
438 685 0.759959 TTGAGAGGCGTGGTGGTTAA 59.240 50.000 0.00 0.00 0.00 2.01
449 849 3.241701 GTGGTGGTTAATTCATTGCGTG 58.758 45.455 0.00 0.00 0.00 5.34
487 915 8.229811 GCACTTGTTTTTCTCTTTTGAAAACAT 58.770 29.630 12.58 0.00 43.09 2.71
529 960 5.559770 TGCAGTCTGAAACAGATAAATGGA 58.440 37.500 3.32 1.85 42.73 3.41
544 976 0.844661 ATGGACCAGCCCACCTAACA 60.845 55.000 0.00 0.00 39.34 2.41
612 1045 0.586802 GCCGAATAGGAAATGCCGTC 59.413 55.000 0.00 0.00 45.00 4.79
616 1049 2.034001 CGAATAGGAAATGCCGTCGTTC 60.034 50.000 0.00 0.00 43.43 3.95
617 1050 1.567504 ATAGGAAATGCCGTCGTTCG 58.432 50.000 0.00 0.00 43.43 3.95
618 1051 1.079875 TAGGAAATGCCGTCGTTCGC 61.080 55.000 0.00 0.00 43.43 4.70
619 1052 2.275812 GAAATGCCGTCGTTCGCG 60.276 61.111 0.00 0.00 42.98 5.87
620 1053 4.439472 AAATGCCGTCGTTCGCGC 62.439 61.111 0.00 0.00 41.05 6.86
627 1060 4.191485 GTCGTTCGCGCACGGATG 62.191 66.667 29.35 3.22 40.74 3.51
628 1061 4.407694 TCGTTCGCGCACGGATGA 62.408 61.111 29.35 8.91 40.57 2.92
629 1062 3.902063 CGTTCGCGCACGGATGAG 61.902 66.667 23.39 0.00 35.69 2.90
630 1063 3.554692 GTTCGCGCACGGATGAGG 61.555 66.667 8.75 0.00 40.63 3.86
631 1064 3.754530 TTCGCGCACGGATGAGGA 61.755 61.111 8.75 0.00 40.63 3.71
632 1065 3.076258 TTCGCGCACGGATGAGGAT 62.076 57.895 8.75 0.00 40.63 3.24
633 1066 3.333189 CGCGCACGGATGAGGATG 61.333 66.667 8.75 0.00 34.97 3.51
634 1067 3.643978 GCGCACGGATGAGGATGC 61.644 66.667 0.30 0.00 34.66 3.91
635 1068 2.107750 CGCACGGATGAGGATGCT 59.892 61.111 0.00 0.00 35.88 3.79
636 1069 1.953138 CGCACGGATGAGGATGCTC 60.953 63.158 7.39 7.39 35.88 4.26
637 1070 1.953138 GCACGGATGAGGATGCTCG 60.953 63.158 9.88 0.42 35.16 5.03
638 1071 1.439228 CACGGATGAGGATGCTCGT 59.561 57.895 8.93 8.93 0.00 4.18
639 1072 0.179100 CACGGATGAGGATGCTCGTT 60.179 55.000 10.59 0.00 0.00 3.85
640 1073 0.179100 ACGGATGAGGATGCTCGTTG 60.179 55.000 10.59 8.91 0.00 4.10
641 1074 0.179100 CGGATGAGGATGCTCGTTGT 60.179 55.000 10.59 0.00 0.00 3.32
642 1075 1.576356 GGATGAGGATGCTCGTTGTC 58.424 55.000 10.59 5.46 0.00 3.18
643 1076 1.137872 GGATGAGGATGCTCGTTGTCT 59.862 52.381 10.59 0.00 0.00 3.41
644 1077 2.468831 GATGAGGATGCTCGTTGTCTC 58.531 52.381 10.59 0.00 0.00 3.36
645 1078 0.171231 TGAGGATGCTCGTTGTCTCG 59.829 55.000 9.88 0.00 0.00 4.04
646 1079 0.171455 GAGGATGCTCGTTGTCTCGT 59.829 55.000 0.00 0.00 0.00 4.18
647 1080 1.400846 GAGGATGCTCGTTGTCTCGTA 59.599 52.381 0.00 0.00 0.00 3.43
648 1081 1.402259 AGGATGCTCGTTGTCTCGTAG 59.598 52.381 0.00 0.00 0.00 3.51
649 1082 1.192793 GATGCTCGTTGTCTCGTAGC 58.807 55.000 0.00 0.00 35.91 3.58
650 1083 0.526211 ATGCTCGTTGTCTCGTAGCA 59.474 50.000 12.39 12.39 42.62 3.49
651 1084 0.109735 TGCTCGTTGTCTCGTAGCAG 60.110 55.000 0.00 0.00 38.21 4.24
652 1085 0.109689 GCTCGTTGTCTCGTAGCAGT 60.110 55.000 0.00 0.00 35.66 4.40
653 1086 1.129998 GCTCGTTGTCTCGTAGCAGTA 59.870 52.381 0.00 0.00 35.66 2.74
654 1087 2.788407 GCTCGTTGTCTCGTAGCAGTAG 60.788 54.545 0.00 0.00 35.66 2.57
655 1088 1.129998 TCGTTGTCTCGTAGCAGTAGC 59.870 52.381 0.00 0.00 42.56 3.58
698 1131 3.093566 CGATTGATCGTAGGAGGCG 57.906 57.895 5.26 0.00 44.74 5.52
699 1132 1.004277 CGATTGATCGTAGGAGGCGC 61.004 60.000 0.00 0.00 44.74 6.53
700 1133 0.315568 GATTGATCGTAGGAGGCGCT 59.684 55.000 7.64 0.00 0.00 5.92
701 1134 0.315568 ATTGATCGTAGGAGGCGCTC 59.684 55.000 7.64 2.45 0.00 5.03
717 1150 4.435970 TCCTCCCACCGCTCGCTA 62.436 66.667 0.00 0.00 0.00 4.26
718 1151 3.905678 CCTCCCACCGCTCGCTAG 61.906 72.222 0.00 0.00 0.00 3.42
719 1152 3.141488 CTCCCACCGCTCGCTAGT 61.141 66.667 0.00 0.00 0.00 2.57
720 1153 3.127352 CTCCCACCGCTCGCTAGTC 62.127 68.421 0.00 0.00 0.00 2.59
721 1154 4.208686 CCCACCGCTCGCTAGTCC 62.209 72.222 0.00 0.00 0.00 3.85
722 1155 3.141488 CCACCGCTCGCTAGTCCT 61.141 66.667 0.00 0.00 0.00 3.85
723 1156 2.711922 CCACCGCTCGCTAGTCCTT 61.712 63.158 0.00 0.00 0.00 3.36
724 1157 1.215647 CACCGCTCGCTAGTCCTTT 59.784 57.895 0.00 0.00 0.00 3.11
725 1158 0.389948 CACCGCTCGCTAGTCCTTTT 60.390 55.000 0.00 0.00 0.00 2.27
726 1159 0.320697 ACCGCTCGCTAGTCCTTTTT 59.679 50.000 0.00 0.00 0.00 1.94
743 1176 2.766970 TTTTTCGACAAAAGCCCTCG 57.233 45.000 0.00 0.00 32.96 4.63
744 1177 1.670791 TTTTCGACAAAAGCCCTCGT 58.329 45.000 0.00 0.00 0.00 4.18
745 1178 1.670791 TTTCGACAAAAGCCCTCGTT 58.329 45.000 0.00 0.00 0.00 3.85
746 1179 1.223187 TTCGACAAAAGCCCTCGTTC 58.777 50.000 0.00 0.00 0.00 3.95
747 1180 0.942410 TCGACAAAAGCCCTCGTTCG 60.942 55.000 0.00 0.00 0.00 3.95
748 1181 1.206831 GACAAAAGCCCTCGTTCGC 59.793 57.895 0.00 0.00 0.00 4.70
749 1182 1.227853 ACAAAAGCCCTCGTTCGCT 60.228 52.632 0.00 0.00 36.74 4.93
750 1183 0.034337 ACAAAAGCCCTCGTTCGCTA 59.966 50.000 0.00 0.00 34.11 4.26
751 1184 0.721718 CAAAAGCCCTCGTTCGCTAG 59.278 55.000 0.00 0.00 34.11 3.42
752 1185 0.320697 AAAAGCCCTCGTTCGCTAGT 59.679 50.000 0.00 0.00 34.11 2.57
753 1186 0.108756 AAAGCCCTCGTTCGCTAGTC 60.109 55.000 0.00 0.00 34.11 2.59
754 1187 0.966370 AAGCCCTCGTTCGCTAGTCT 60.966 55.000 0.00 0.00 34.11 3.24
755 1188 0.966370 AGCCCTCGTTCGCTAGTCTT 60.966 55.000 0.00 0.00 32.26 3.01
756 1189 0.802607 GCCCTCGTTCGCTAGTCTTG 60.803 60.000 0.00 0.00 0.00 3.02
757 1190 0.802607 CCCTCGTTCGCTAGTCTTGC 60.803 60.000 0.00 0.00 0.00 4.01
758 1191 0.109272 CCTCGTTCGCTAGTCTTGCA 60.109 55.000 7.07 0.00 0.00 4.08
759 1192 1.469940 CCTCGTTCGCTAGTCTTGCAT 60.470 52.381 7.07 0.00 0.00 3.96
760 1193 1.585668 CTCGTTCGCTAGTCTTGCATG 59.414 52.381 7.07 0.00 0.00 4.06
761 1194 1.067846 TCGTTCGCTAGTCTTGCATGT 60.068 47.619 7.07 0.00 0.00 3.21
762 1195 1.321743 CGTTCGCTAGTCTTGCATGTC 59.678 52.381 7.07 0.00 0.00 3.06
763 1196 2.611518 GTTCGCTAGTCTTGCATGTCT 58.388 47.619 7.07 4.86 0.00 3.41
764 1197 2.996621 GTTCGCTAGTCTTGCATGTCTT 59.003 45.455 7.07 0.00 0.00 3.01
765 1198 3.319137 TCGCTAGTCTTGCATGTCTTT 57.681 42.857 7.07 0.00 0.00 2.52
766 1199 3.664107 TCGCTAGTCTTGCATGTCTTTT 58.336 40.909 7.07 0.00 0.00 2.27
767 1200 4.065088 TCGCTAGTCTTGCATGTCTTTTT 58.935 39.130 7.07 0.00 0.00 1.94
795 1228 2.770164 TTTGAGGGAGCTAGTCTTGC 57.230 50.000 0.00 0.00 0.00 4.01
796 1229 1.644509 TTGAGGGAGCTAGTCTTGCA 58.355 50.000 8.99 0.00 0.00 4.08
797 1230 1.871418 TGAGGGAGCTAGTCTTGCAT 58.129 50.000 8.99 0.00 0.00 3.96
798 1231 1.483827 TGAGGGAGCTAGTCTTGCATG 59.516 52.381 8.99 0.00 0.00 4.06
799 1232 1.484240 GAGGGAGCTAGTCTTGCATGT 59.516 52.381 8.99 0.00 0.00 3.21
800 1233 1.484240 AGGGAGCTAGTCTTGCATGTC 59.516 52.381 8.99 0.00 0.00 3.06
801 1234 1.565305 GGAGCTAGTCTTGCATGTCG 58.435 55.000 8.99 0.00 0.00 4.35
802 1235 1.135139 GGAGCTAGTCTTGCATGTCGA 59.865 52.381 8.99 0.00 0.00 4.20
803 1236 2.223923 GGAGCTAGTCTTGCATGTCGAT 60.224 50.000 8.99 0.00 0.00 3.59
804 1237 3.049206 GAGCTAGTCTTGCATGTCGATC 58.951 50.000 8.99 0.00 0.00 3.69
805 1238 1.783711 GCTAGTCTTGCATGTCGATCG 59.216 52.381 9.36 9.36 0.00 3.69
806 1239 2.796383 GCTAGTCTTGCATGTCGATCGT 60.796 50.000 15.94 0.00 0.00 3.73
807 1240 3.548214 GCTAGTCTTGCATGTCGATCGTA 60.548 47.826 15.94 6.14 0.00 3.43
808 1241 3.717400 AGTCTTGCATGTCGATCGTAT 57.283 42.857 15.94 8.33 0.00 3.06
809 1242 3.375642 AGTCTTGCATGTCGATCGTATG 58.624 45.455 22.07 22.07 0.00 2.39
810 1243 3.066760 AGTCTTGCATGTCGATCGTATGA 59.933 43.478 27.11 15.52 0.00 2.15
811 1244 3.423536 GTCTTGCATGTCGATCGTATGAG 59.576 47.826 27.11 19.65 0.00 2.90
812 1245 2.422276 TGCATGTCGATCGTATGAGG 57.578 50.000 27.11 12.26 0.00 3.86
813 1246 1.063806 GCATGTCGATCGTATGAGGC 58.936 55.000 27.11 16.73 0.00 4.70
814 1247 1.331241 CATGTCGATCGTATGAGGCG 58.669 55.000 21.96 4.17 0.00 5.52
815 1248 0.952280 ATGTCGATCGTATGAGGCGT 59.048 50.000 15.94 0.00 0.00 5.68
816 1249 0.736636 TGTCGATCGTATGAGGCGTT 59.263 50.000 15.94 0.00 0.00 4.84
817 1250 1.133598 TGTCGATCGTATGAGGCGTTT 59.866 47.619 15.94 0.00 0.00 3.60
818 1251 1.517276 GTCGATCGTATGAGGCGTTTG 59.483 52.381 15.94 0.00 0.00 2.93
819 1252 1.133598 TCGATCGTATGAGGCGTTTGT 59.866 47.619 15.94 0.00 0.00 2.83
820 1253 1.517276 CGATCGTATGAGGCGTTTGTC 59.483 52.381 7.03 0.00 0.00 3.18
821 1254 1.859080 GATCGTATGAGGCGTTTGTCC 59.141 52.381 0.00 0.00 0.00 4.02
822 1255 0.108520 TCGTATGAGGCGTTTGTCCC 60.109 55.000 0.00 0.00 0.00 4.46
823 1256 1.087771 CGTATGAGGCGTTTGTCCCC 61.088 60.000 0.00 0.00 0.00 4.81
824 1257 1.087771 GTATGAGGCGTTTGTCCCCG 61.088 60.000 0.00 0.00 0.00 5.73
831 1264 2.263540 GTTTGTCCCCGCTCGCTA 59.736 61.111 0.00 0.00 0.00 4.26
832 1265 1.810030 GTTTGTCCCCGCTCGCTAG 60.810 63.158 0.00 0.00 0.00 3.42
833 1266 2.280552 TTTGTCCCCGCTCGCTAGT 61.281 57.895 0.00 0.00 0.00 2.57
834 1267 2.221906 TTTGTCCCCGCTCGCTAGTC 62.222 60.000 0.00 0.00 0.00 2.59
835 1268 4.253257 GTCCCCGCTCGCTAGTCG 62.253 72.222 0.00 0.00 40.15 4.18
836 1269 4.790962 TCCCCGCTCGCTAGTCGT 62.791 66.667 6.49 0.00 39.67 4.34
837 1270 4.554363 CCCCGCTCGCTAGTCGTG 62.554 72.222 6.49 5.63 39.67 4.35
842 1275 2.577112 CTCGCTAGTCGTGCCGTG 60.577 66.667 6.49 0.00 39.67 4.94
843 1276 4.771356 TCGCTAGTCGTGCCGTGC 62.771 66.667 6.49 0.00 39.67 5.34
869 1302 3.490759 CACGCGTGCTAGGCAAGG 61.491 66.667 28.16 0.00 41.47 3.61
872 1305 2.512515 GCGTGCTAGGCAAGGGAG 60.513 66.667 7.45 0.00 41.47 4.30
873 1306 2.512515 CGTGCTAGGCAAGGGAGC 60.513 66.667 0.00 0.00 41.47 4.70
922 1355 2.436115 GGCACGGCCCAGTAAGTC 60.436 66.667 0.00 0.00 44.06 3.01
923 1356 2.345991 GCACGGCCCAGTAAGTCA 59.654 61.111 0.00 0.00 0.00 3.41
924 1357 2.033194 GCACGGCCCAGTAAGTCAC 61.033 63.158 0.00 0.00 0.00 3.67
925 1358 1.736645 CACGGCCCAGTAAGTCACG 60.737 63.158 0.00 0.00 0.00 4.35
926 1359 2.205152 ACGGCCCAGTAAGTCACGT 61.205 57.895 0.00 0.00 0.00 4.49
927 1360 1.736645 CGGCCCAGTAAGTCACGTG 60.737 63.158 9.94 9.94 0.00 4.49
928 1361 2.033194 GGCCCAGTAAGTCACGTGC 61.033 63.158 11.67 6.26 0.00 5.34
929 1362 2.033194 GCCCAGTAAGTCACGTGCC 61.033 63.158 11.67 0.00 0.00 5.01
930 1363 1.736645 CCCAGTAAGTCACGTGCCG 60.737 63.158 11.67 0.00 0.00 5.69
931 1364 1.006571 CCAGTAAGTCACGTGCCGT 60.007 57.895 11.67 0.00 42.36 5.68
954 1387 4.962836 GCCTGGCATGCGGGCTAT 62.963 66.667 32.38 0.00 43.83 2.97
955 1388 2.670934 CCTGGCATGCGGGCTATC 60.671 66.667 12.44 0.00 43.83 2.08
956 1389 3.046087 CTGGCATGCGGGCTATCG 61.046 66.667 12.44 0.00 43.83 2.92
957 1390 3.814615 CTGGCATGCGGGCTATCGT 62.815 63.158 12.44 0.00 43.83 3.73
958 1391 3.349006 GGCATGCGGGCTATCGTG 61.349 66.667 12.44 0.00 39.42 4.35
959 1392 4.017877 GCATGCGGGCTATCGTGC 62.018 66.667 0.00 3.53 37.94 5.34
968 1401 4.524318 CTATCGTGCCGGCCCGTT 62.524 66.667 30.01 24.10 0.00 4.44
969 1402 4.085204 TATCGTGCCGGCCCGTTT 62.085 61.111 30.01 20.57 0.00 3.60
983 1416 1.064979 CCCGTTTGGCCAGGTATAGTT 60.065 52.381 5.11 0.00 0.00 2.24
1194 1645 1.748122 CATCTCAGCCACTGCCACC 60.748 63.158 0.00 0.00 38.69 4.61
1253 1704 2.437359 CTTCCAGAGCGGCCCAAG 60.437 66.667 0.00 0.00 33.14 3.61
1289 1740 2.301738 CCCTTCTCCCTCCACCACC 61.302 68.421 0.00 0.00 0.00 4.61
1327 1784 3.684628 TTCTCCTCCTCCGCCCCT 61.685 66.667 0.00 0.00 0.00 4.79
1566 2032 0.315251 TTGCTCATATCCGCCTCTCG 59.685 55.000 0.00 0.00 38.08 4.04
1580 2046 1.271379 CCTCTCGTGTGGGATTTGGTT 60.271 52.381 0.00 0.00 0.00 3.67
1671 2140 0.175302 CAGCAGAAGTCCAGCGAGAT 59.825 55.000 0.00 0.00 0.00 2.75
1678 2147 3.317711 AGAAGTCCAGCGAGATGATACAG 59.682 47.826 0.00 0.00 0.00 2.74
1683 2152 3.958147 TCCAGCGAGATGATACAGGTAAA 59.042 43.478 0.00 0.00 0.00 2.01
1685 2154 4.202161 CCAGCGAGATGATACAGGTAAAGT 60.202 45.833 0.00 0.00 0.00 2.66
1719 2189 0.744414 TCAGCGTGCATTTCTAGCCC 60.744 55.000 0.00 0.00 0.00 5.19
1821 2291 2.158534 TGTGTGGGTCAAAACCTATGCT 60.159 45.455 0.00 0.00 45.66 3.79
1887 2367 5.906113 TTTATAATCCGCTGCCAGAAAAA 57.094 34.783 0.00 0.00 0.00 1.94
1907 2387 8.277918 AGAAAAATAGCCATGGAACTAGAGATT 58.722 33.333 18.40 3.08 0.00 2.40
1913 2393 5.663106 AGCCATGGAACTAGAGATTAGTTGA 59.337 40.000 18.40 0.00 37.83 3.18
1916 2396 7.041508 GCCATGGAACTAGAGATTAGTTGATTG 60.042 40.741 18.40 0.52 37.83 2.67
1952 2432 1.202651 AGATAAAGGCCGGTTGGATCG 60.203 52.381 1.90 0.00 37.49 3.69
2179 2696 2.498481 CACATAGTTCGGTAGTTCCCCA 59.502 50.000 0.00 0.00 0.00 4.96
2227 2744 4.927978 TGTGATTTTTGGGTGTTACCAG 57.072 40.909 0.00 0.00 42.47 4.00
2239 2756 5.121105 GGGTGTTACCAGGTACATTATCAC 58.879 45.833 0.00 2.90 41.02 3.06
2659 6910 2.907892 TGGGATTGGCATTTTTGGGTA 58.092 42.857 0.00 0.00 0.00 3.69
2660 6911 2.836981 TGGGATTGGCATTTTTGGGTAG 59.163 45.455 0.00 0.00 0.00 3.18
2675 6926 1.616994 GGGTAGGGCTGTTTCAAGCAT 60.617 52.381 0.00 0.00 45.43 3.79
2676 6927 1.474077 GGTAGGGCTGTTTCAAGCATG 59.526 52.381 0.00 0.00 45.43 4.06
2677 6928 1.135286 GTAGGGCTGTTTCAAGCATGC 60.135 52.381 10.51 10.51 45.43 4.06
2678 6929 1.079612 GGGCTGTTTCAAGCATGCC 60.080 57.895 15.66 6.27 45.43 4.40
2679 6930 1.079612 GGCTGTTTCAAGCATGCCC 60.080 57.895 15.66 0.44 45.43 5.36
2848 7099 8.657074 CAATGAATGATTGCCTTCATGTAAAT 57.343 30.769 0.00 0.00 40.33 1.40
2849 7100 9.104965 CAATGAATGATTGCCTTCATGTAAATT 57.895 29.630 0.00 0.00 40.33 1.82
2906 7157 4.512571 ACTTGTTCAATTTTCAGGCAATGC 59.487 37.500 0.00 0.00 0.00 3.56
2928 7179 3.784511 ACCAGAGATGGATGCCATTAG 57.215 47.619 0.31 0.00 45.26 1.73
2931 7182 1.991070 AGAGATGGATGCCATTAGGGG 59.009 52.381 0.00 0.00 45.26 4.79
3168 7419 7.435488 CGGAAGTATGTAACCTTCAGTAGATTG 59.565 40.741 0.00 0.00 0.00 2.67
3443 7819 7.604164 CCTTTAGCTATGGTGTTACTCCATATG 59.396 40.741 21.65 16.99 43.94 1.78
3458 7834 6.064717 ACTCCATATGCTCCATTAAAAGGAC 58.935 40.000 0.00 0.00 0.00 3.85
3461 7837 6.064060 CCATATGCTCCATTAAAAGGACTCA 58.936 40.000 0.00 0.00 0.00 3.41
3470 7846 7.745717 TCCATTAAAAGGACTCATAATCCGAT 58.254 34.615 0.00 0.00 41.52 4.18
3486 7862 1.875514 CCGATCGCCAATGTTCATGAT 59.124 47.619 10.32 0.00 0.00 2.45
3512 7888 4.488126 TTCTTTGCTGTGAGTAATGCAC 57.512 40.909 0.00 0.00 35.01 4.57
3691 8068 2.300437 CCCGGATCCTCTTTACATCCTC 59.700 54.545 10.75 0.00 34.89 3.71
3757 8134 3.983344 GCAATTTGTCTGGTGTGATTGTC 59.017 43.478 0.00 0.00 0.00 3.18
3923 8433 7.823745 ACCATATTGCCTCCATAAAACTTAG 57.176 36.000 0.00 0.00 0.00 2.18
3949 8459 7.759489 AAGGTAAACAAGCAATTCATGTCTA 57.241 32.000 0.00 0.00 0.00 2.59
4109 8621 9.618890 AATATATTGTGTTATGTCAGCTCAACT 57.381 29.630 0.00 0.00 0.00 3.16
4115 8627 2.267174 ATGTCAGCTCAACTTGCAGT 57.733 45.000 0.00 0.00 0.00 4.40
4116 8628 1.302366 TGTCAGCTCAACTTGCAGTG 58.698 50.000 0.00 0.00 0.00 3.66
4117 8629 1.303309 GTCAGCTCAACTTGCAGTGT 58.697 50.000 0.00 0.00 0.00 3.55
4123 8635 2.813754 GCTCAACTTGCAGTGTGGAATA 59.186 45.455 0.00 0.00 0.00 1.75
4125 8637 4.067896 CTCAACTTGCAGTGTGGAATAGT 58.932 43.478 0.00 0.00 0.00 2.12
4139 8651 2.487986 GGAATAGTGGGCCATCCTTCTG 60.488 54.545 10.70 0.00 36.20 3.02
4149 8661 2.684927 GCCATCCTTCTGTTGCCAGTAT 60.685 50.000 0.00 0.00 39.82 2.12
4150 8662 3.624777 CCATCCTTCTGTTGCCAGTATT 58.375 45.455 0.00 0.00 39.82 1.89
4163 8675 8.800370 TGTTGCCAGTATTATGAAGATGTTTA 57.200 30.769 0.00 0.00 0.00 2.01
4232 8745 5.468072 GCCAAGGTATGACAGTATTGAGATG 59.532 44.000 0.00 0.00 0.00 2.90
4410 8923 8.719596 TGTATATGGTATTGGTGAGTATGGTTT 58.280 33.333 0.00 0.00 0.00 3.27
4637 9158 2.440409 CAGTACCTTCAGCAAAGCCAT 58.560 47.619 0.00 0.00 33.29 4.40
4643 9164 4.347607 ACCTTCAGCAAAGCCATCTTTAT 58.652 39.130 0.00 0.00 40.35 1.40
4664 9185 2.370519 TCACTCACGGAATTGGAGGAAA 59.629 45.455 0.00 0.00 32.98 3.13
4670 9191 5.183228 TCACGGAATTGGAGGAAATAAGAC 58.817 41.667 0.00 0.00 0.00 3.01
4671 9192 4.941263 CACGGAATTGGAGGAAATAAGACA 59.059 41.667 0.00 0.00 0.00 3.41
4676 9197 6.403309 GGAATTGGAGGAAATAAGACACGAAC 60.403 42.308 0.00 0.00 0.00 3.95
4680 9201 4.804665 GGAGGAAATAAGACACGAACTAGC 59.195 45.833 0.00 0.00 0.00 3.42
4757 9278 6.097839 ACTCTATAAGCATTGTTCTTCGGGTA 59.902 38.462 0.00 0.00 0.00 3.69
4771 9292 1.096967 CGGGTATTGCTGATGCTGCA 61.097 55.000 4.13 4.13 40.48 4.41
4831 9352 5.221342 GGAGAAATCTAGAGGCAAATCTCGA 60.221 44.000 0.00 0.00 38.71 4.04
4850 9371 2.525368 GAAAGGGCAGGTAAACCATGT 58.475 47.619 1.26 0.00 38.89 3.21
4874 9397 4.898265 AGCACATAGGAGCTTAATGAGAGA 59.102 41.667 9.95 0.00 37.73 3.10
4875 9398 5.365025 AGCACATAGGAGCTTAATGAGAGAA 59.635 40.000 9.95 0.00 37.73 2.87
4876 9399 6.043012 AGCACATAGGAGCTTAATGAGAGAAT 59.957 38.462 9.95 0.00 37.73 2.40
4877 9400 7.234371 AGCACATAGGAGCTTAATGAGAGAATA 59.766 37.037 9.95 0.00 37.73 1.75
4942 9465 3.189618 TCCTGACATGCTGCTAAGATG 57.810 47.619 0.00 0.00 0.00 2.90
5008 9531 0.964358 GCTGCTGTGGCCTCTTTCAT 60.964 55.000 3.32 0.00 37.74 2.57
5113 9675 3.756434 GGTGTTCATCTTCCGAAAATGGA 59.244 43.478 0.00 0.00 35.83 3.41
5115 9677 4.695455 GTGTTCATCTTCCGAAAATGGAGA 59.305 41.667 0.00 0.00 39.72 3.71
5116 9678 5.355350 GTGTTCATCTTCCGAAAATGGAGAT 59.645 40.000 0.00 0.00 39.72 2.75
5117 9679 5.945784 TGTTCATCTTCCGAAAATGGAGATT 59.054 36.000 0.00 0.00 39.72 2.40
5118 9680 7.065803 GTGTTCATCTTCCGAAAATGGAGATTA 59.934 37.037 0.00 0.00 39.72 1.75
5119 9681 7.609918 TGTTCATCTTCCGAAAATGGAGATTAA 59.390 33.333 0.00 0.00 39.72 1.40
5120 9682 7.553881 TCATCTTCCGAAAATGGAGATTAAC 57.446 36.000 0.00 0.00 39.72 2.01
5121 9683 6.542370 TCATCTTCCGAAAATGGAGATTAACC 59.458 38.462 0.00 0.00 39.72 2.85
5122 9684 5.811190 TCTTCCGAAAATGGAGATTAACCA 58.189 37.500 0.00 0.00 39.72 3.67
5123 9685 5.880332 TCTTCCGAAAATGGAGATTAACCAG 59.120 40.000 0.00 0.00 40.89 4.00
5124 9686 5.174037 TCCGAAAATGGAGATTAACCAGT 57.826 39.130 0.00 0.00 40.89 4.00
5125 9687 5.566469 TCCGAAAATGGAGATTAACCAGTT 58.434 37.500 0.00 0.00 45.47 3.16
5126 9688 5.646360 TCCGAAAATGGAGATTAACCAGTTC 59.354 40.000 0.00 0.00 43.32 3.01
5127 9689 5.163652 CCGAAAATGGAGATTAACCAGTTCC 60.164 44.000 0.00 0.00 43.32 3.62
5128 9690 5.648092 CGAAAATGGAGATTAACCAGTTCCT 59.352 40.000 0.00 0.00 43.32 3.36
5129 9691 6.183360 CGAAAATGGAGATTAACCAGTTCCTC 60.183 42.308 0.00 0.00 43.32 3.71
5130 9692 6.394345 AAATGGAGATTAACCAGTTCCTCT 57.606 37.500 0.00 0.00 40.86 3.69
5131 9693 6.394345 AATGGAGATTAACCAGTTCCTCTT 57.606 37.500 0.00 0.00 40.89 2.85
5132 9694 5.165961 TGGAGATTAACCAGTTCCTCTTG 57.834 43.478 0.00 0.00 33.22 3.02
5133 9695 4.844085 TGGAGATTAACCAGTTCCTCTTGA 59.156 41.667 0.00 0.00 33.22 3.02
5134 9696 5.046304 TGGAGATTAACCAGTTCCTCTTGAG 60.046 44.000 0.00 0.00 33.22 3.02
5135 9697 5.046231 GGAGATTAACCAGTTCCTCTTGAGT 60.046 44.000 0.00 0.00 0.00 3.41
5136 9698 6.441088 AGATTAACCAGTTCCTCTTGAGTT 57.559 37.500 0.00 0.00 0.00 3.01
5137 9699 6.842676 AGATTAACCAGTTCCTCTTGAGTTT 58.157 36.000 0.00 0.00 0.00 2.66
5138 9700 7.290813 AGATTAACCAGTTCCTCTTGAGTTTT 58.709 34.615 0.00 0.00 0.00 2.43
5139 9701 8.437575 AGATTAACCAGTTCCTCTTGAGTTTTA 58.562 33.333 0.00 0.00 0.00 1.52
5140 9702 8.622948 ATTAACCAGTTCCTCTTGAGTTTTAG 57.377 34.615 0.00 0.00 0.00 1.85
5141 9703 5.888982 ACCAGTTCCTCTTGAGTTTTAGA 57.111 39.130 0.00 0.00 0.00 2.10
5142 9704 5.859495 ACCAGTTCCTCTTGAGTTTTAGAG 58.141 41.667 0.00 0.00 38.08 2.43
5143 9705 5.602978 ACCAGTTCCTCTTGAGTTTTAGAGA 59.397 40.000 0.00 0.00 40.24 3.10
5144 9706 6.099845 ACCAGTTCCTCTTGAGTTTTAGAGAA 59.900 38.462 0.00 0.00 40.24 2.87
5145 9707 6.425417 CCAGTTCCTCTTGAGTTTTAGAGAAC 59.575 42.308 0.00 0.00 40.24 3.01
5146 9708 6.986817 CAGTTCCTCTTGAGTTTTAGAGAACA 59.013 38.462 12.52 0.00 40.24 3.18
5147 9709 7.495934 CAGTTCCTCTTGAGTTTTAGAGAACAA 59.504 37.037 12.52 0.00 40.24 2.83
5148 9710 8.047310 AGTTCCTCTTGAGTTTTAGAGAACAAA 58.953 33.333 12.52 0.00 40.24 2.83
5149 9711 8.674607 GTTCCTCTTGAGTTTTAGAGAACAAAA 58.325 33.333 0.00 0.00 40.24 2.44
5150 9712 8.980481 TCCTCTTGAGTTTTAGAGAACAAAAT 57.020 30.769 0.00 0.00 40.24 1.82
5151 9713 8.840321 TCCTCTTGAGTTTTAGAGAACAAAATG 58.160 33.333 0.00 0.00 40.24 2.32
5152 9714 8.078596 CCTCTTGAGTTTTAGAGAACAAAATGG 58.921 37.037 0.00 0.00 40.24 3.16
5153 9715 7.940850 TCTTGAGTTTTAGAGAACAAAATGGG 58.059 34.615 0.00 0.00 31.94 4.00
5154 9716 7.777910 TCTTGAGTTTTAGAGAACAAAATGGGA 59.222 33.333 0.00 0.00 31.94 4.37
5190 9752 3.949754 TCGTGTTCCTATCTTCCGTGTAT 59.050 43.478 0.00 0.00 0.00 2.29
5202 9764 0.454957 CCGTGTATGCACTTGCTTGC 60.455 55.000 12.30 0.58 43.16 4.01
5205 9767 1.236616 TGTATGCACTTGCTTGCGCT 61.237 50.000 9.73 0.00 46.20 5.92
5228 9790 3.884693 TGTGTGCAGTTCAACTCATGATT 59.115 39.130 0.00 0.00 38.03 2.57
5229 9791 4.224433 GTGTGCAGTTCAACTCATGATTG 58.776 43.478 0.00 3.82 38.03 2.67
5230 9792 3.240069 GTGCAGTTCAACTCATGATTGC 58.760 45.455 0.00 7.90 43.71 3.56
5231 9793 3.057736 GTGCAGTTCAACTCATGATTGCT 60.058 43.478 0.00 0.00 43.75 3.91
5232 9794 4.154737 GTGCAGTTCAACTCATGATTGCTA 59.845 41.667 0.00 0.00 43.75 3.49
5233 9795 4.393990 TGCAGTTCAACTCATGATTGCTAG 59.606 41.667 0.00 0.00 43.75 3.42
5234 9796 4.633126 GCAGTTCAACTCATGATTGCTAGA 59.367 41.667 0.00 0.00 41.83 2.43
5235 9797 5.447010 GCAGTTCAACTCATGATTGCTAGAC 60.447 44.000 0.00 2.03 41.83 2.59
5236 9798 5.873712 CAGTTCAACTCATGATTGCTAGACT 59.126 40.000 0.00 3.91 38.03 3.24
5237 9799 5.873712 AGTTCAACTCATGATTGCTAGACTG 59.126 40.000 0.00 0.00 38.03 3.51
5238 9800 5.411831 TCAACTCATGATTGCTAGACTGT 57.588 39.130 0.00 0.00 31.50 3.55
5239 9801 6.530019 TCAACTCATGATTGCTAGACTGTA 57.470 37.500 0.00 0.00 31.50 2.74
5240 9802 7.117285 TCAACTCATGATTGCTAGACTGTAT 57.883 36.000 0.00 0.00 31.50 2.29
5241 9803 8.237811 TCAACTCATGATTGCTAGACTGTATA 57.762 34.615 0.00 0.00 31.50 1.47
5242 9804 8.864087 TCAACTCATGATTGCTAGACTGTATAT 58.136 33.333 0.00 0.00 31.50 0.86
5245 9807 9.301897 ACTCATGATTGCTAGACTGTATATACA 57.698 33.333 14.75 14.75 34.56 2.29
5246 9808 9.566530 CTCATGATTGCTAGACTGTATATACAC 57.433 37.037 11.62 3.59 31.93 2.90
5247 9809 8.237267 TCATGATTGCTAGACTGTATATACACG 58.763 37.037 11.62 10.32 31.93 4.49
5248 9810 7.506328 TGATTGCTAGACTGTATATACACGT 57.494 36.000 11.62 13.13 31.93 4.49
5249 9811 8.611654 TGATTGCTAGACTGTATATACACGTA 57.388 34.615 11.62 3.32 31.93 3.57
5250 9812 8.718734 TGATTGCTAGACTGTATATACACGTAG 58.281 37.037 11.62 12.42 31.93 3.51
5251 9813 8.843885 ATTGCTAGACTGTATATACACGTAGA 57.156 34.615 11.62 5.46 31.93 2.59
5252 9814 7.649370 TGCTAGACTGTATATACACGTAGAC 57.351 40.000 11.62 3.32 31.93 2.59
5253 9815 6.648310 TGCTAGACTGTATATACACGTAGACC 59.352 42.308 11.62 3.55 31.93 3.85
5254 9816 6.091986 GCTAGACTGTATATACACGTAGACCC 59.908 46.154 11.62 3.26 31.93 4.46
5255 9817 6.185114 AGACTGTATATACACGTAGACCCT 57.815 41.667 11.62 5.12 31.93 4.34
5256 9818 6.599445 AGACTGTATATACACGTAGACCCTT 58.401 40.000 11.62 0.00 31.93 3.95
5257 9819 6.485984 AGACTGTATATACACGTAGACCCTTG 59.514 42.308 11.62 0.76 31.93 3.61
5258 9820 6.125029 ACTGTATATACACGTAGACCCTTGT 58.875 40.000 11.62 1.36 31.93 3.16
5259 9821 7.282585 ACTGTATATACACGTAGACCCTTGTA 58.717 38.462 11.62 0.00 31.93 2.41
5260 9822 7.941238 ACTGTATATACACGTAGACCCTTGTAT 59.059 37.037 11.62 0.00 38.43 2.29
5261 9823 9.440773 CTGTATATACACGTAGACCCTTGTATA 57.559 37.037 11.62 0.00 40.15 1.47
5262 9824 9.219603 TGTATATACACGTAGACCCTTGTATAC 57.780 37.037 11.62 0.00 39.20 1.47
5272 9834 8.707938 GTAGACCCTTGTATACGTTTGTAATT 57.292 34.615 0.00 0.00 33.44 1.40
5273 9835 7.605410 AGACCCTTGTATACGTTTGTAATTG 57.395 36.000 0.00 0.00 33.44 2.32
5274 9836 7.163441 AGACCCTTGTATACGTTTGTAATTGT 58.837 34.615 0.00 0.00 33.44 2.71
5275 9837 8.313292 AGACCCTTGTATACGTTTGTAATTGTA 58.687 33.333 0.00 0.00 33.44 2.41
5276 9838 9.101655 GACCCTTGTATACGTTTGTAATTGTAT 57.898 33.333 0.00 0.00 33.44 2.29
5277 9839 9.452287 ACCCTTGTATACGTTTGTAATTGTATT 57.548 29.630 0.00 0.00 33.44 1.89
5278 9840 9.710979 CCCTTGTATACGTTTGTAATTGTATTG 57.289 33.333 0.00 0.00 33.44 1.90
5285 9847 7.748691 ACGTTTGTAATTGTATTGTACCCTT 57.251 32.000 0.00 0.00 0.00 3.95
5286 9848 8.168790 ACGTTTGTAATTGTATTGTACCCTTT 57.831 30.769 0.00 0.00 0.00 3.11
5287 9849 8.077386 ACGTTTGTAATTGTATTGTACCCTTTG 58.923 33.333 0.00 0.00 0.00 2.77
5288 9850 7.539366 CGTTTGTAATTGTATTGTACCCTTTGG 59.461 37.037 0.00 0.00 37.80 3.28
5290 9852 9.584008 TTTGTAATTGTATTGTACCCTTTGGTA 57.416 29.630 0.00 0.00 45.45 3.25
5306 9868 9.670442 ACCCTTTGGTACTTCTATATAATGAGA 57.330 33.333 0.00 0.00 45.45 3.27
5312 9874 9.990868 TGGTACTTCTATATAATGAGATAGCCA 57.009 33.333 0.00 0.00 28.58 4.75
5318 9880 8.958060 TCTATATAATGAGATAGCCATACCCC 57.042 38.462 0.00 0.00 28.58 4.95
5319 9881 6.672266 ATATAATGAGATAGCCATACCCCG 57.328 41.667 0.00 0.00 0.00 5.73
5320 9882 2.327325 ATGAGATAGCCATACCCCGT 57.673 50.000 0.00 0.00 0.00 5.28
5321 9883 2.097110 TGAGATAGCCATACCCCGTT 57.903 50.000 0.00 0.00 0.00 4.44
5322 9884 2.404559 TGAGATAGCCATACCCCGTTT 58.595 47.619 0.00 0.00 0.00 3.60
5323 9885 3.578978 TGAGATAGCCATACCCCGTTTA 58.421 45.455 0.00 0.00 0.00 2.01
5324 9886 3.576982 TGAGATAGCCATACCCCGTTTAG 59.423 47.826 0.00 0.00 0.00 1.85
5325 9887 2.904434 AGATAGCCATACCCCGTTTAGG 59.096 50.000 0.00 0.00 40.63 2.69
5389 9951 2.747446 ACTTCTTGCACACAACTTTCGT 59.253 40.909 0.00 0.00 0.00 3.85
5420 9982 7.173218 TGCATCTTTCTAATGTTCTTCGAGTTT 59.827 33.333 0.00 0.00 0.00 2.66
5461 10023 7.444487 AGTTTGTTGTCTATTCCTCAACTTACC 59.556 37.037 0.00 0.00 41.05 2.85
5491 10053 8.757982 ATAATAATGTCCTTGCTGAGTTTCAT 57.242 30.769 0.00 0.00 0.00 2.57
5503 10065 5.163561 TGCTGAGTTTCATCCTTTTCGTTTT 60.164 36.000 0.00 0.00 0.00 2.43
5711 10273 5.262588 TGTGCTACATCGTCATGAACTAT 57.737 39.130 0.00 0.00 33.72 2.12
5832 10394 4.646492 ACATCCTCTTGAGCTTGTGTTTTT 59.354 37.500 0.00 0.00 0.00 1.94
5914 10476 3.735591 TGATGCTTATAGCCGGTTTACC 58.264 45.455 1.90 0.00 41.51 2.85
5937 10500 6.826741 ACCTGGCTTTATCTTATTAAGCGAAA 59.173 34.615 0.00 1.67 43.93 3.46
5973 10536 9.574458 TGTTCGATGTTTTTATTCAGTTTCAAA 57.426 25.926 0.00 0.00 0.00 2.69
5985 10548 6.507958 TTCAGTTTCAAACACATGTTGAGA 57.492 33.333 2.41 0.00 38.44 3.27
6029 10593 0.991920 ATGTTCAATCCGACTGGGGT 59.008 50.000 0.00 0.00 36.01 4.95
6053 10623 5.296813 GTGAATATCACAACCTCAACACC 57.703 43.478 5.65 0.00 46.22 4.16
6054 10624 4.759693 GTGAATATCACAACCTCAACACCA 59.240 41.667 5.65 0.00 46.22 4.17
6077 10647 5.350504 TTTTCAACAAGCTTGGGATTTCA 57.649 34.783 29.18 9.41 0.00 2.69
6093 10663 2.102070 TTCACACCGTGTGTCTTGTT 57.898 45.000 26.86 0.00 43.92 2.83
6105 10675 5.177511 CGTGTGTCTTGTTCTCATACACATT 59.822 40.000 9.51 0.00 44.55 2.71
6115 10685 7.330262 TGTTCTCATACACATTAGCAGAATGA 58.670 34.615 15.91 0.00 39.69 2.57
6308 10880 6.894339 ACGAAATCCCAGATTACACTTTTT 57.106 33.333 0.00 0.00 0.00 1.94
6350 10922 3.521765 TTGGCCCCATTTGCGTCCT 62.522 57.895 0.00 0.00 0.00 3.85
6351 10923 3.140814 GGCCCCATTTGCGTCCTC 61.141 66.667 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
487 915 8.204836 AGACTGCAGTAGTTTTTCTTCTTCTTA 58.795 33.333 21.73 0.00 40.53 2.10
529 960 2.747686 CGTGTTAGGTGGGCTGGT 59.252 61.111 0.00 0.00 0.00 4.00
612 1045 3.902063 CTCATCCGTGCGCGAACG 61.902 66.667 32.41 32.41 43.20 3.95
616 1049 3.333189 CATCCTCATCCGTGCGCG 61.333 66.667 13.88 13.88 37.95 6.86
617 1050 3.643978 GCATCCTCATCCGTGCGC 61.644 66.667 0.00 0.00 0.00 6.09
618 1051 1.953138 GAGCATCCTCATCCGTGCG 60.953 63.158 0.00 0.00 42.18 5.34
619 1052 1.953138 CGAGCATCCTCATCCGTGC 60.953 63.158 0.00 0.00 38.00 5.34
620 1053 0.179100 AACGAGCATCCTCATCCGTG 60.179 55.000 0.00 0.00 38.00 4.94
621 1054 0.179100 CAACGAGCATCCTCATCCGT 60.179 55.000 0.00 0.00 38.00 4.69
622 1055 0.179100 ACAACGAGCATCCTCATCCG 60.179 55.000 0.00 0.00 38.00 4.18
623 1056 1.137872 AGACAACGAGCATCCTCATCC 59.862 52.381 0.00 0.00 38.00 3.51
624 1057 2.468831 GAGACAACGAGCATCCTCATC 58.531 52.381 0.00 0.00 38.00 2.92
625 1058 1.202348 CGAGACAACGAGCATCCTCAT 60.202 52.381 0.00 0.00 38.00 2.90
626 1059 0.171231 CGAGACAACGAGCATCCTCA 59.829 55.000 0.00 0.00 38.00 3.86
627 1060 0.171455 ACGAGACAACGAGCATCCTC 59.829 55.000 0.00 0.00 37.03 3.71
628 1061 1.402259 CTACGAGACAACGAGCATCCT 59.598 52.381 0.00 0.00 37.03 3.24
629 1062 1.828832 CTACGAGACAACGAGCATCC 58.171 55.000 0.00 0.00 37.03 3.51
630 1063 1.192793 GCTACGAGACAACGAGCATC 58.807 55.000 0.00 0.00 36.88 3.91
631 1064 0.526211 TGCTACGAGACAACGAGCAT 59.474 50.000 0.00 0.00 39.41 3.79
632 1065 0.109735 CTGCTACGAGACAACGAGCA 60.110 55.000 0.00 0.00 40.70 4.26
633 1066 0.109689 ACTGCTACGAGACAACGAGC 60.110 55.000 0.00 0.00 37.15 5.03
634 1067 2.788407 GCTACTGCTACGAGACAACGAG 60.788 54.545 0.00 0.00 35.25 4.18
635 1068 1.129998 GCTACTGCTACGAGACAACGA 59.870 52.381 0.00 0.00 35.25 3.85
636 1069 1.536149 GCTACTGCTACGAGACAACG 58.464 55.000 0.00 0.00 36.40 4.10
637 1070 1.536149 CGCTACTGCTACGAGACAAC 58.464 55.000 0.00 0.00 36.97 3.32
638 1071 0.179171 GCGCTACTGCTACGAGACAA 60.179 55.000 0.00 0.00 36.97 3.18
639 1072 1.303091 TGCGCTACTGCTACGAGACA 61.303 55.000 9.73 0.00 36.97 3.41
640 1073 0.862283 GTGCGCTACTGCTACGAGAC 60.862 60.000 9.73 0.00 36.97 3.36
641 1074 1.025113 AGTGCGCTACTGCTACGAGA 61.025 55.000 9.73 0.00 38.49 4.04
642 1075 0.656259 TAGTGCGCTACTGCTACGAG 59.344 55.000 18.70 0.00 40.65 4.18
643 1076 0.656259 CTAGTGCGCTACTGCTACGA 59.344 55.000 18.70 0.00 40.65 3.43
644 1077 0.930742 GCTAGTGCGCTACTGCTACG 60.931 60.000 18.70 0.00 40.65 3.51
645 1078 2.874709 GCTAGTGCGCTACTGCTAC 58.125 57.895 18.70 3.48 40.65 3.58
681 1114 0.315568 AGCGCCTCCTACGATCAATC 59.684 55.000 2.29 0.00 0.00 2.67
682 1115 0.315568 GAGCGCCTCCTACGATCAAT 59.684 55.000 2.29 0.00 44.80 2.57
683 1116 1.734137 GAGCGCCTCCTACGATCAA 59.266 57.895 2.29 0.00 44.80 2.57
684 1117 3.433319 GAGCGCCTCCTACGATCA 58.567 61.111 2.29 0.00 44.80 2.92
685 1118 2.646143 GGAGCGCCTCCTACGATC 59.354 66.667 15.90 0.00 46.41 3.69
700 1133 4.435970 TAGCGAGCGGTGGGAGGA 62.436 66.667 4.69 0.00 0.00 3.71
701 1134 3.905678 CTAGCGAGCGGTGGGAGG 61.906 72.222 4.69 0.00 0.00 4.30
702 1135 3.127352 GACTAGCGAGCGGTGGGAG 62.127 68.421 10.03 0.20 0.00 4.30
703 1136 3.138798 GACTAGCGAGCGGTGGGA 61.139 66.667 10.03 0.00 0.00 4.37
704 1137 4.208686 GGACTAGCGAGCGGTGGG 62.209 72.222 10.03 3.46 0.00 4.61
705 1138 2.227089 AAAGGACTAGCGAGCGGTGG 62.227 60.000 4.69 4.29 0.00 4.61
706 1139 0.389948 AAAAGGACTAGCGAGCGGTG 60.390 55.000 4.69 0.00 0.00 4.94
707 1140 0.320697 AAAAAGGACTAGCGAGCGGT 59.679 50.000 0.00 0.00 0.00 5.68
708 1141 3.139029 AAAAAGGACTAGCGAGCGG 57.861 52.632 0.00 0.00 0.00 5.52
724 1157 2.018515 ACGAGGGCTTTTGTCGAAAAA 58.981 42.857 0.00 0.00 37.16 1.94
725 1158 1.670791 ACGAGGGCTTTTGTCGAAAA 58.329 45.000 0.00 0.00 37.16 2.29
726 1159 1.600485 GAACGAGGGCTTTTGTCGAAA 59.400 47.619 0.00 0.00 37.16 3.46
727 1160 1.223187 GAACGAGGGCTTTTGTCGAA 58.777 50.000 0.00 0.00 37.16 3.71
728 1161 0.942410 CGAACGAGGGCTTTTGTCGA 60.942 55.000 0.00 0.00 37.16 4.20
729 1162 1.491563 CGAACGAGGGCTTTTGTCG 59.508 57.895 0.00 0.00 39.63 4.35
730 1163 1.206831 GCGAACGAGGGCTTTTGTC 59.793 57.895 0.00 0.00 0.00 3.18
731 1164 0.034337 TAGCGAACGAGGGCTTTTGT 59.966 50.000 4.41 0.00 40.58 2.83
732 1165 0.721718 CTAGCGAACGAGGGCTTTTG 59.278 55.000 4.41 0.00 40.58 2.44
733 1166 0.320697 ACTAGCGAACGAGGGCTTTT 59.679 50.000 4.41 0.00 40.58 2.27
734 1167 0.108756 GACTAGCGAACGAGGGCTTT 60.109 55.000 4.41 0.00 40.58 3.51
735 1168 0.966370 AGACTAGCGAACGAGGGCTT 60.966 55.000 4.41 0.00 40.58 4.35
736 1169 0.966370 AAGACTAGCGAACGAGGGCT 60.966 55.000 0.00 0.00 43.12 5.19
737 1170 0.802607 CAAGACTAGCGAACGAGGGC 60.803 60.000 0.00 0.00 0.00 5.19
738 1171 0.802607 GCAAGACTAGCGAACGAGGG 60.803 60.000 0.00 0.00 0.00 4.30
739 1172 0.109272 TGCAAGACTAGCGAACGAGG 60.109 55.000 0.00 0.00 33.85 4.63
740 1173 1.585668 CATGCAAGACTAGCGAACGAG 59.414 52.381 0.00 0.00 33.85 4.18
741 1174 1.067846 ACATGCAAGACTAGCGAACGA 60.068 47.619 0.00 0.00 33.85 3.85
742 1175 1.321743 GACATGCAAGACTAGCGAACG 59.678 52.381 0.00 0.00 33.85 3.95
743 1176 2.611518 AGACATGCAAGACTAGCGAAC 58.388 47.619 0.00 0.00 33.85 3.95
744 1177 3.319137 AAGACATGCAAGACTAGCGAA 57.681 42.857 0.00 0.00 33.85 4.70
745 1178 3.319137 AAAGACATGCAAGACTAGCGA 57.681 42.857 0.00 0.00 33.85 4.93
746 1179 4.410492 AAAAAGACATGCAAGACTAGCG 57.590 40.909 0.00 0.00 33.85 4.26
774 1207 3.181445 TGCAAGACTAGCTCCCTCAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
775 1208 2.371841 TGCAAGACTAGCTCCCTCAAAA 59.628 45.455 0.00 0.00 0.00 2.44
776 1209 1.977854 TGCAAGACTAGCTCCCTCAAA 59.022 47.619 0.00 0.00 0.00 2.69
777 1210 1.644509 TGCAAGACTAGCTCCCTCAA 58.355 50.000 0.00 0.00 0.00 3.02
778 1211 1.483827 CATGCAAGACTAGCTCCCTCA 59.516 52.381 0.00 0.00 0.00 3.86
779 1212 1.484240 ACATGCAAGACTAGCTCCCTC 59.516 52.381 0.00 0.00 0.00 4.30
780 1213 1.484240 GACATGCAAGACTAGCTCCCT 59.516 52.381 0.00 0.00 0.00 4.20
781 1214 1.804372 CGACATGCAAGACTAGCTCCC 60.804 57.143 0.00 0.00 0.00 4.30
782 1215 1.135139 TCGACATGCAAGACTAGCTCC 59.865 52.381 0.00 0.00 0.00 4.70
783 1216 2.568696 TCGACATGCAAGACTAGCTC 57.431 50.000 0.00 0.00 0.00 4.09
784 1217 2.542618 CGATCGACATGCAAGACTAGCT 60.543 50.000 10.26 0.00 0.00 3.32
785 1218 1.783711 CGATCGACATGCAAGACTAGC 59.216 52.381 10.26 0.00 0.00 3.42
786 1219 3.071786 ACGATCGACATGCAAGACTAG 57.928 47.619 24.34 0.00 0.00 2.57
787 1220 4.274950 TCATACGATCGACATGCAAGACTA 59.725 41.667 24.34 0.00 0.00 2.59
788 1221 3.066760 TCATACGATCGACATGCAAGACT 59.933 43.478 24.34 0.00 0.00 3.24
789 1222 3.372060 TCATACGATCGACATGCAAGAC 58.628 45.455 24.34 0.00 0.00 3.01
790 1223 3.550842 CCTCATACGATCGACATGCAAGA 60.551 47.826 24.34 7.58 0.00 3.02
791 1224 2.728318 CCTCATACGATCGACATGCAAG 59.272 50.000 24.34 16.24 0.00 4.01
792 1225 2.742774 CCTCATACGATCGACATGCAA 58.257 47.619 24.34 8.54 0.00 4.08
793 1226 1.602920 GCCTCATACGATCGACATGCA 60.603 52.381 24.34 12.41 0.00 3.96
794 1227 1.063806 GCCTCATACGATCGACATGC 58.936 55.000 24.34 12.18 0.00 4.06
795 1228 1.331241 CGCCTCATACGATCGACATG 58.669 55.000 24.34 22.16 0.00 3.21
796 1229 0.952280 ACGCCTCATACGATCGACAT 59.048 50.000 24.34 11.55 0.00 3.06
797 1230 0.736636 AACGCCTCATACGATCGACA 59.263 50.000 24.34 9.49 0.00 4.35
798 1231 1.517276 CAAACGCCTCATACGATCGAC 59.483 52.381 24.34 0.93 0.00 4.20
799 1232 1.133598 ACAAACGCCTCATACGATCGA 59.866 47.619 24.34 5.87 0.00 3.59
800 1233 1.517276 GACAAACGCCTCATACGATCG 59.483 52.381 14.88 14.88 0.00 3.69
801 1234 1.859080 GGACAAACGCCTCATACGATC 59.141 52.381 0.00 0.00 0.00 3.69
802 1235 1.472728 GGGACAAACGCCTCATACGAT 60.473 52.381 0.00 0.00 0.00 3.73
803 1236 0.108520 GGGACAAACGCCTCATACGA 60.109 55.000 0.00 0.00 0.00 3.43
804 1237 1.087771 GGGGACAAACGCCTCATACG 61.088 60.000 0.00 0.00 46.34 3.06
805 1238 2.776659 GGGGACAAACGCCTCATAC 58.223 57.895 0.00 0.00 46.34 2.39
813 1246 3.636313 TAGCGAGCGGGGACAAACG 62.636 63.158 0.00 0.00 0.00 3.60
814 1247 1.810030 CTAGCGAGCGGGGACAAAC 60.810 63.158 0.00 0.00 0.00 2.93
815 1248 2.221906 GACTAGCGAGCGGGGACAAA 62.222 60.000 0.00 0.00 0.00 2.83
816 1249 2.678934 ACTAGCGAGCGGGGACAA 60.679 61.111 0.00 0.00 0.00 3.18
817 1250 3.138798 GACTAGCGAGCGGGGACA 61.139 66.667 0.00 0.00 0.00 4.02
818 1251 4.253257 CGACTAGCGAGCGGGGAC 62.253 72.222 0.00 0.00 44.57 4.46
819 1252 4.790962 ACGACTAGCGAGCGGGGA 62.791 66.667 12.46 0.00 44.57 4.81
820 1253 4.554363 CACGACTAGCGAGCGGGG 62.554 72.222 12.46 3.96 44.57 5.73
852 1285 3.490759 CCTTGCCTAGCACGCGTG 61.491 66.667 34.01 34.01 38.71 5.34
853 1286 4.760047 CCCTTGCCTAGCACGCGT 62.760 66.667 5.58 5.58 38.71 6.01
854 1287 4.451150 TCCCTTGCCTAGCACGCG 62.451 66.667 3.53 3.53 38.71 6.01
855 1288 2.512515 CTCCCTTGCCTAGCACGC 60.513 66.667 0.00 0.00 38.71 5.34
856 1289 2.512515 GCTCCCTTGCCTAGCACG 60.513 66.667 0.00 0.00 38.71 5.34
906 1339 2.033194 GTGACTTACTGGGCCGTGC 61.033 63.158 10.60 0.00 0.00 5.34
907 1340 1.736645 CGTGACTTACTGGGCCGTG 60.737 63.158 10.60 3.25 0.00 4.94
908 1341 2.205152 ACGTGACTTACTGGGCCGT 61.205 57.895 0.00 2.29 0.00 5.68
909 1342 1.736645 CACGTGACTTACTGGGCCG 60.737 63.158 10.90 0.00 0.00 6.13
910 1343 2.033194 GCACGTGACTTACTGGGCC 61.033 63.158 22.23 0.00 0.00 5.80
911 1344 2.033194 GGCACGTGACTTACTGGGC 61.033 63.158 22.23 0.00 33.45 5.36
912 1345 4.278956 GGCACGTGACTTACTGGG 57.721 61.111 22.23 0.00 0.00 4.45
938 1371 2.670934 GATAGCCCGCATGCCAGG 60.671 66.667 13.15 14.56 0.00 4.45
939 1372 3.046087 CGATAGCCCGCATGCCAG 61.046 66.667 13.15 4.50 0.00 4.85
940 1373 3.860605 ACGATAGCCCGCATGCCA 61.861 61.111 13.15 0.00 42.67 4.92
941 1374 3.349006 CACGATAGCCCGCATGCC 61.349 66.667 13.15 0.00 42.67 4.40
942 1375 4.017877 GCACGATAGCCCGCATGC 62.018 66.667 7.91 7.91 42.67 4.06
963 1396 0.544697 ACTATACCTGGCCAAACGGG 59.455 55.000 7.01 7.12 42.81 5.28
964 1397 2.093128 AGAACTATACCTGGCCAAACGG 60.093 50.000 7.01 7.56 0.00 4.44
965 1398 2.936498 CAGAACTATACCTGGCCAAACG 59.064 50.000 7.01 0.00 0.00 3.60
966 1399 4.192317 CTCAGAACTATACCTGGCCAAAC 58.808 47.826 7.01 0.00 0.00 2.93
967 1400 3.844211 ACTCAGAACTATACCTGGCCAAA 59.156 43.478 7.01 0.00 0.00 3.28
968 1401 3.450904 ACTCAGAACTATACCTGGCCAA 58.549 45.455 7.01 0.00 0.00 4.52
969 1402 3.031736 GACTCAGAACTATACCTGGCCA 58.968 50.000 4.71 4.71 0.00 5.36
970 1403 3.031736 TGACTCAGAACTATACCTGGCC 58.968 50.000 0.00 0.00 0.00 5.36
971 1404 3.181474 GGTGACTCAGAACTATACCTGGC 60.181 52.174 0.00 0.00 0.00 4.85
972 1405 3.385111 GGGTGACTCAGAACTATACCTGG 59.615 52.174 0.00 0.00 0.00 4.45
973 1406 3.385111 GGGGTGACTCAGAACTATACCTG 59.615 52.174 0.00 0.00 0.00 4.00
974 1407 3.012502 TGGGGTGACTCAGAACTATACCT 59.987 47.826 0.00 0.00 34.24 3.08
975 1408 3.371965 TGGGGTGACTCAGAACTATACC 58.628 50.000 0.00 0.00 34.24 2.73
1194 1645 4.320456 ACTGGAGTGGCAGTGGCG 62.320 66.667 12.58 0.00 42.47 5.69
1200 1651 2.574018 CGGAGTGACTGGAGTGGCA 61.574 63.158 0.00 0.00 0.00 4.92
1253 1704 1.602771 GGAAGAGGTGGTGTAGGGC 59.397 63.158 0.00 0.00 0.00 5.19
1566 2032 1.686052 TGAGCAAACCAAATCCCACAC 59.314 47.619 0.00 0.00 0.00 3.82
1580 2046 1.210478 GATAGAAGCCCACCTGAGCAA 59.790 52.381 0.00 0.00 0.00 3.91
1671 2140 2.504175 GGAGGGCACTTTACCTGTATCA 59.496 50.000 0.00 0.00 37.18 2.15
1678 2147 1.188863 TAGACGGAGGGCACTTTACC 58.811 55.000 0.00 0.00 0.00 2.85
1683 2152 1.482593 CTGAATTAGACGGAGGGCACT 59.517 52.381 0.00 0.00 0.00 4.40
1685 2154 0.178068 GCTGAATTAGACGGAGGGCA 59.822 55.000 0.00 0.00 0.00 5.36
1719 2189 6.334202 TGGGTACTTTACAAGCAAACAAAAG 58.666 36.000 0.00 0.00 34.19 2.27
1739 2209 0.107508 CGCTGAATCAGACCATGGGT 60.108 55.000 18.09 0.99 39.44 4.51
1821 2291 4.222810 TGAAGCAGCCTTACAGTTAGATCA 59.777 41.667 0.00 0.00 0.00 2.92
1887 2367 7.510685 TCAACTAATCTCTAGTTCCATGGCTAT 59.489 37.037 6.96 0.00 35.76 2.97
1907 2387 9.743057 CTATTTTGGTGTTTGTTCAATCAACTA 57.257 29.630 11.29 3.49 35.79 2.24
1916 2396 7.330946 GGCCTTTATCTATTTTGGTGTTTGTTC 59.669 37.037 0.00 0.00 0.00 3.18
2227 2744 6.746120 AGATTGAGTACCGTGATAATGTACC 58.254 40.000 0.00 0.00 36.38 3.34
2239 2756 8.888579 ATATAAGGTTTCAAGATTGAGTACCG 57.111 34.615 16.68 0.00 43.10 4.02
2366 2893 9.410556 CCCTACAATGAGTCAAAATTACAAAAG 57.589 33.333 0.00 0.00 0.00 2.27
2446 4427 2.606272 GCCGACGGACAGGTATAAAAAG 59.394 50.000 20.50 0.00 0.00 2.27
2501 6743 7.046652 TGTTTCAAAATCATTTCAAGCTTCCA 58.953 30.769 0.00 0.00 0.00 3.53
2659 6910 1.538687 GGCATGCTTGAAACAGCCCT 61.539 55.000 18.92 0.00 39.25 5.19
2660 6911 1.079612 GGCATGCTTGAAACAGCCC 60.080 57.895 18.92 0.00 39.25 5.19
2675 6926 2.099251 TAAAACCATGGGCCAGGGCA 62.099 55.000 35.65 16.50 39.09 5.36
2676 6927 0.907230 TTAAAACCATGGGCCAGGGC 60.907 55.000 35.65 3.77 39.09 5.19
2677 6928 0.901827 GTTAAAACCATGGGCCAGGG 59.098 55.000 34.29 34.29 41.50 4.45
2678 6929 1.550072 CTGTTAAAACCATGGGCCAGG 59.450 52.381 18.09 12.92 0.00 4.45
2679 6930 1.550072 CCTGTTAAAACCATGGGCCAG 59.450 52.381 18.09 11.35 0.00 4.85
2906 7157 2.359981 ATGGCATCCATCTCTGGTTG 57.640 50.000 0.00 0.00 40.74 3.77
2928 7179 1.377725 CTCACATCCACTGCACCCC 60.378 63.158 0.00 0.00 0.00 4.95
2931 7182 3.254166 ACAAAATCTCACATCCACTGCAC 59.746 43.478 0.00 0.00 0.00 4.57
3443 7819 6.073003 CGGATTATGAGTCCTTTTAATGGAGC 60.073 42.308 0.00 0.00 33.78 4.70
3458 7834 3.329386 ACATTGGCGATCGGATTATGAG 58.671 45.455 18.30 0.00 0.00 2.90
3461 7837 3.738982 TGAACATTGGCGATCGGATTAT 58.261 40.909 18.30 0.00 0.00 1.28
3470 7846 5.183713 AGAAAAAGATCATGAACATTGGCGA 59.816 36.000 0.00 0.00 0.00 5.54
3486 7862 6.183360 TGCATTACTCACAGCAAAGAAAAAGA 60.183 34.615 0.00 0.00 33.48 2.52
3512 7888 1.005215 ACAATCAGAGGGGCAGAAAGG 59.995 52.381 0.00 0.00 0.00 3.11
3573 7949 9.077885 TCTACAATCAGAAAAAGCAAGGTTAAT 57.922 29.630 0.00 0.00 0.00 1.40
3691 8068 3.074412 GGTCAGTGATGTTAACACAGGG 58.926 50.000 11.22 6.57 40.25 4.45
3757 8134 3.119495 TGATGGACAGATACACAGACACG 60.119 47.826 0.00 0.00 0.00 4.49
3923 8433 7.147976 AGACATGAATTGCTTGTTTACCTTTC 58.852 34.615 0.00 0.00 35.27 2.62
3949 8459 1.065854 GCAGAGTAGCCAACTGGATGT 60.066 52.381 0.00 0.00 39.07 3.06
4009 8519 5.782893 TCAAATTCAGAATCGGTGGTTTT 57.217 34.783 0.00 0.00 0.00 2.43
4109 8621 1.886222 GCCCACTATTCCACACTGCAA 60.886 52.381 0.00 0.00 0.00 4.08
4115 8627 0.550914 GGATGGCCCACTATTCCACA 59.449 55.000 0.00 0.00 31.94 4.17
4116 8628 0.846693 AGGATGGCCCACTATTCCAC 59.153 55.000 0.00 0.00 37.41 4.02
4117 8629 1.494721 GAAGGATGGCCCACTATTCCA 59.505 52.381 0.00 0.00 37.41 3.53
4123 8635 0.038744 CAACAGAAGGATGGCCCACT 59.961 55.000 0.00 0.00 37.41 4.00
4125 8637 1.304381 GCAACAGAAGGATGGCCCA 60.304 57.895 0.00 0.00 37.41 5.36
4150 8662 8.651389 CCCACTCCTCTATTAAACATCTTCATA 58.349 37.037 0.00 0.00 0.00 2.15
4163 8675 4.271807 TCATGAGTCCCACTCCTCTATT 57.728 45.455 0.00 0.00 44.44 1.73
4410 8923 5.977725 CGTTGTCTCAGTTCTTAAAGACTCA 59.022 40.000 4.77 0.00 39.09 3.41
4637 9158 5.414789 TCCAATTCCGTGAGTGATAAAGA 57.585 39.130 0.00 0.00 0.00 2.52
4643 9164 1.639722 TCCTCCAATTCCGTGAGTGA 58.360 50.000 0.00 0.00 0.00 3.41
4664 9185 6.216569 CCATGTATGCTAGTTCGTGTCTTAT 58.783 40.000 0.00 0.00 0.00 1.73
4670 9191 1.867233 GGCCATGTATGCTAGTTCGTG 59.133 52.381 0.00 0.00 0.00 4.35
4671 9192 1.538204 CGGCCATGTATGCTAGTTCGT 60.538 52.381 2.24 0.00 0.00 3.85
4676 9197 1.672356 GGGCGGCCATGTATGCTAG 60.672 63.158 25.33 0.00 0.00 3.42
4680 9201 3.289834 GCTGGGCGGCCATGTATG 61.290 66.667 32.84 20.27 0.00 2.39
4771 9292 1.271840 TTGCCCGATACCCAAGAGCT 61.272 55.000 0.00 0.00 0.00 4.09
4809 9330 5.860941 TCGAGATTTGCCTCTAGATTTCT 57.139 39.130 0.00 0.00 0.00 2.52
4831 9352 2.694616 ACATGGTTTACCTGCCCTTT 57.305 45.000 0.00 0.00 36.82 3.11
4850 9371 6.071320 TCTCTCATTAAGCTCCTATGTGCTA 58.929 40.000 0.00 0.00 40.28 3.49
4942 9465 0.733909 GCCTCCTTGCGCAAAATCAC 60.734 55.000 25.01 10.16 0.00 3.06
5008 9531 6.653320 ACAGTATCAAAACCGCTCTTATTCAA 59.347 34.615 0.00 0.00 0.00 2.69
5047 9570 4.745125 GCTCTCAAGTTACATTAGCGCATA 59.255 41.667 11.47 0.00 0.00 3.14
5113 9675 6.441088 AACTCAAGAGGAACTGGTTAATCT 57.559 37.500 1.73 0.00 41.55 2.40
5115 9677 8.437575 TCTAAAACTCAAGAGGAACTGGTTAAT 58.562 33.333 1.73 0.00 41.55 1.40
5116 9678 7.798071 TCTAAAACTCAAGAGGAACTGGTTAA 58.202 34.615 1.73 0.00 41.55 2.01
5117 9679 7.289317 TCTCTAAAACTCAAGAGGAACTGGTTA 59.711 37.037 1.73 0.00 41.55 2.85
5118 9680 6.099845 TCTCTAAAACTCAAGAGGAACTGGTT 59.900 38.462 1.73 0.00 41.55 3.67
5119 9681 5.602978 TCTCTAAAACTCAAGAGGAACTGGT 59.397 40.000 1.73 0.00 41.55 4.00
5120 9682 6.102897 TCTCTAAAACTCAAGAGGAACTGG 57.897 41.667 1.73 0.00 41.55 4.00
5121 9683 6.986817 TGTTCTCTAAAACTCAAGAGGAACTG 59.013 38.462 1.73 0.00 41.55 3.16
5123 9685 7.787725 TTGTTCTCTAAAACTCAAGAGGAAC 57.212 36.000 1.73 4.56 39.79 3.62
5124 9686 8.801882 TTTTGTTCTCTAAAACTCAAGAGGAA 57.198 30.769 1.73 0.00 39.79 3.36
5125 9687 8.840321 CATTTTGTTCTCTAAAACTCAAGAGGA 58.160 33.333 1.73 0.00 39.79 3.71
5126 9688 8.078596 CCATTTTGTTCTCTAAAACTCAAGAGG 58.921 37.037 1.73 0.00 39.79 3.69
5127 9689 8.078596 CCCATTTTGTTCTCTAAAACTCAAGAG 58.921 37.037 0.00 0.00 40.54 2.85
5128 9690 7.777910 TCCCATTTTGTTCTCTAAAACTCAAGA 59.222 33.333 0.00 0.00 30.64 3.02
5129 9691 7.940850 TCCCATTTTGTTCTCTAAAACTCAAG 58.059 34.615 0.00 0.00 30.64 3.02
5130 9692 7.889873 TCCCATTTTGTTCTCTAAAACTCAA 57.110 32.000 0.00 0.00 30.64 3.02
5131 9693 8.477419 AATCCCATTTTGTTCTCTAAAACTCA 57.523 30.769 0.00 0.00 30.64 3.41
5136 9698 9.362151 ACAGTTAATCCCATTTTGTTCTCTAAA 57.638 29.630 0.00 0.00 0.00 1.85
5137 9699 8.792633 CACAGTTAATCCCATTTTGTTCTCTAA 58.207 33.333 0.00 0.00 0.00 2.10
5138 9700 8.160765 TCACAGTTAATCCCATTTTGTTCTCTA 58.839 33.333 0.00 0.00 0.00 2.43
5139 9701 7.004086 TCACAGTTAATCCCATTTTGTTCTCT 58.996 34.615 0.00 0.00 0.00 3.10
5140 9702 7.214467 TCACAGTTAATCCCATTTTGTTCTC 57.786 36.000 0.00 0.00 0.00 2.87
5141 9703 7.451255 TCATCACAGTTAATCCCATTTTGTTCT 59.549 33.333 0.00 0.00 0.00 3.01
5142 9704 7.601856 TCATCACAGTTAATCCCATTTTGTTC 58.398 34.615 0.00 0.00 0.00 3.18
5143 9705 7.537596 TCATCACAGTTAATCCCATTTTGTT 57.462 32.000 0.00 0.00 0.00 2.83
5144 9706 7.415541 CGATCATCACAGTTAATCCCATTTTGT 60.416 37.037 0.00 0.00 0.00 2.83
5145 9707 6.914215 CGATCATCACAGTTAATCCCATTTTG 59.086 38.462 0.00 0.00 0.00 2.44
5146 9708 6.603201 ACGATCATCACAGTTAATCCCATTTT 59.397 34.615 0.00 0.00 0.00 1.82
5147 9709 6.038603 CACGATCATCACAGTTAATCCCATTT 59.961 38.462 0.00 0.00 0.00 2.32
5148 9710 5.528690 CACGATCATCACAGTTAATCCCATT 59.471 40.000 0.00 0.00 0.00 3.16
5149 9711 5.059161 CACGATCATCACAGTTAATCCCAT 58.941 41.667 0.00 0.00 0.00 4.00
5150 9712 4.081142 ACACGATCATCACAGTTAATCCCA 60.081 41.667 0.00 0.00 0.00 4.37
5151 9713 4.442706 ACACGATCATCACAGTTAATCCC 58.557 43.478 0.00 0.00 0.00 3.85
5152 9714 5.006746 GGAACACGATCATCACAGTTAATCC 59.993 44.000 0.00 0.00 0.00 3.01
5153 9715 5.812642 AGGAACACGATCATCACAGTTAATC 59.187 40.000 0.00 0.00 0.00 1.75
5154 9716 5.734720 AGGAACACGATCATCACAGTTAAT 58.265 37.500 0.00 0.00 0.00 1.40
5202 9764 0.378257 AGTTGAACTGCACACAAGCG 59.622 50.000 0.00 0.00 37.31 4.68
5205 9767 3.277715 TCATGAGTTGAACTGCACACAA 58.722 40.909 0.90 0.00 0.00 3.33
5228 9790 6.648310 GGTCTACGTGTATATACAGTCTAGCA 59.352 42.308 15.93 1.60 36.78 3.49
5229 9791 6.091986 GGGTCTACGTGTATATACAGTCTAGC 59.908 46.154 15.93 14.28 36.78 3.42
5230 9792 7.385267 AGGGTCTACGTGTATATACAGTCTAG 58.615 42.308 15.93 13.34 36.78 2.43
5231 9793 7.308450 AGGGTCTACGTGTATATACAGTCTA 57.692 40.000 15.93 5.16 36.78 2.59
5232 9794 6.185114 AGGGTCTACGTGTATATACAGTCT 57.815 41.667 15.93 4.28 36.78 3.24
5233 9795 6.261826 ACAAGGGTCTACGTGTATATACAGTC 59.738 42.308 15.93 4.75 36.78 3.51
5234 9796 6.125029 ACAAGGGTCTACGTGTATATACAGT 58.875 40.000 15.93 16.48 36.78 3.55
5235 9797 6.630444 ACAAGGGTCTACGTGTATATACAG 57.370 41.667 15.93 12.06 36.78 2.74
5236 9798 9.219603 GTATACAAGGGTCTACGTGTATATACA 57.780 37.037 11.62 11.62 44.24 2.29
5237 9799 8.383619 CGTATACAAGGGTCTACGTGTATATAC 58.616 40.741 5.89 5.89 44.24 1.47
5238 9800 8.479313 CGTATACAAGGGTCTACGTGTATATA 57.521 38.462 12.58 0.00 44.24 0.86
5239 9801 7.369803 CGTATACAAGGGTCTACGTGTATAT 57.630 40.000 12.58 0.00 44.24 0.86
5240 9802 6.785488 CGTATACAAGGGTCTACGTGTATA 57.215 41.667 0.00 7.55 41.83 1.47
5241 9803 5.679734 CGTATACAAGGGTCTACGTGTAT 57.320 43.478 0.00 9.13 44.37 2.29
5247 9809 8.598075 CAATTACAAACGTATACAAGGGTCTAC 58.402 37.037 3.32 0.00 0.00 2.59
5248 9810 8.313292 ACAATTACAAACGTATACAAGGGTCTA 58.687 33.333 3.32 0.00 0.00 2.59
5249 9811 7.163441 ACAATTACAAACGTATACAAGGGTCT 58.837 34.615 3.32 0.00 0.00 3.85
5250 9812 7.368480 ACAATTACAAACGTATACAAGGGTC 57.632 36.000 3.32 0.00 0.00 4.46
5251 9813 9.452287 AATACAATTACAAACGTATACAAGGGT 57.548 29.630 3.32 0.00 0.00 4.34
5252 9814 9.710979 CAATACAATTACAAACGTATACAAGGG 57.289 33.333 3.32 0.00 0.00 3.95
5259 9821 9.452287 AAGGGTACAATACAATTACAAACGTAT 57.548 29.630 0.00 0.00 0.00 3.06
5260 9822 8.845413 AAGGGTACAATACAATTACAAACGTA 57.155 30.769 0.00 0.00 0.00 3.57
5261 9823 7.748691 AAGGGTACAATACAATTACAAACGT 57.251 32.000 0.00 0.00 0.00 3.99
5262 9824 7.539366 CCAAAGGGTACAATACAATTACAAACG 59.461 37.037 0.00 0.00 0.00 3.60
5263 9825 8.751302 CCAAAGGGTACAATACAATTACAAAC 57.249 34.615 0.00 0.00 0.00 2.93
5286 9848 9.990868 TGGCTATCTCATTATATAGAAGTACCA 57.009 33.333 0.00 0.00 0.00 3.25
5292 9854 9.381038 GGGGTATGGCTATCTCATTATATAGAA 57.619 37.037 0.00 0.00 0.00 2.10
5293 9855 7.670140 CGGGGTATGGCTATCTCATTATATAGA 59.330 40.741 0.00 0.00 0.00 1.98
5294 9856 7.451877 ACGGGGTATGGCTATCTCATTATATAG 59.548 40.741 0.00 0.00 0.00 1.31
5295 9857 7.302948 ACGGGGTATGGCTATCTCATTATATA 58.697 38.462 0.00 0.00 0.00 0.86
5296 9858 6.143915 ACGGGGTATGGCTATCTCATTATAT 58.856 40.000 0.00 0.00 0.00 0.86
5297 9859 5.525484 ACGGGGTATGGCTATCTCATTATA 58.475 41.667 0.00 0.00 0.00 0.98
5298 9860 4.362677 ACGGGGTATGGCTATCTCATTAT 58.637 43.478 0.00 0.00 0.00 1.28
5299 9861 3.786553 ACGGGGTATGGCTATCTCATTA 58.213 45.455 0.00 0.00 0.00 1.90
5300 9862 2.621070 ACGGGGTATGGCTATCTCATT 58.379 47.619 0.00 0.00 0.00 2.57
5301 9863 2.327325 ACGGGGTATGGCTATCTCAT 57.673 50.000 0.00 0.00 0.00 2.90
5302 9864 2.097110 AACGGGGTATGGCTATCTCA 57.903 50.000 0.00 0.00 0.00 3.27
5303 9865 3.056035 CCTAAACGGGGTATGGCTATCTC 60.056 52.174 0.00 0.00 0.00 2.75
5304 9866 2.904434 CCTAAACGGGGTATGGCTATCT 59.096 50.000 0.00 0.00 0.00 1.98
5305 9867 3.329929 CCTAAACGGGGTATGGCTATC 57.670 52.381 0.00 0.00 0.00 2.08
5317 9879 1.156736 CTGCTCAACACCCTAAACGG 58.843 55.000 0.00 0.00 0.00 4.44
5318 9880 1.156736 CCTGCTCAACACCCTAAACG 58.843 55.000 0.00 0.00 0.00 3.60
5319 9881 2.271944 ACCTGCTCAACACCCTAAAC 57.728 50.000 0.00 0.00 0.00 2.01
5320 9882 3.872240 GCATACCTGCTCAACACCCTAAA 60.872 47.826 0.00 0.00 45.32 1.85
5321 9883 2.355716 GCATACCTGCTCAACACCCTAA 60.356 50.000 0.00 0.00 45.32 2.69
5322 9884 1.209504 GCATACCTGCTCAACACCCTA 59.790 52.381 0.00 0.00 45.32 3.53
5323 9885 0.035056 GCATACCTGCTCAACACCCT 60.035 55.000 0.00 0.00 45.32 4.34
5324 9886 2.482326 GCATACCTGCTCAACACCC 58.518 57.895 0.00 0.00 45.32 4.61
5350 9912 0.036732 GTGAGGCCTGACCAACATGA 59.963 55.000 12.00 0.00 43.14 3.07
5389 9951 8.443160 CGAAGAACATTAGAAAGATGCAGTTTA 58.557 33.333 0.00 0.00 0.00 2.01
5420 9982 2.363038 ACAAACTACGTGTAGCAGTGGA 59.637 45.455 6.94 0.00 36.66 4.02
5461 10023 5.056480 TCAGCAAGGACATTATTATCACGG 58.944 41.667 0.00 0.00 0.00 4.94
5503 10065 1.676615 GCGTCCCGATCCTTGGTAAAA 60.677 52.381 0.00 0.00 0.00 1.52
5508 10070 3.774959 CTCGCGTCCCGATCCTTGG 62.775 68.421 5.77 0.00 46.31 3.61
5522 10084 3.659089 TAAGCAGAACGGCCCTCGC 62.659 63.158 0.00 2.86 43.89 5.03
5711 10273 5.123186 CAGCGGTTTTATTGGACATAACTGA 59.877 40.000 0.00 0.00 0.00 3.41
5731 10293 2.409378 GGCATCACAAATTGTTTCAGCG 59.591 45.455 0.00 0.00 0.00 5.18
5832 10394 2.363306 GGCATGACCCCATACATCAA 57.637 50.000 0.00 0.00 0.00 2.57
5914 10476 9.736023 ATTTTTCGCTTAATAAGATAAAGCCAG 57.264 29.630 3.88 0.00 42.04 4.85
5937 10500 9.912634 AATAAAAACATCGAACACATCAGATTT 57.087 25.926 0.00 0.00 0.00 2.17
5973 10536 5.788450 CTTAAGGAGACTCTCAACATGTGT 58.212 41.667 0.00 0.00 42.68 3.72
6029 10593 4.759693 GTGTTGAGGTTGTGATATTCACCA 59.240 41.667 5.27 0.00 46.40 4.17
6053 10623 5.759273 TGAAATCCCAAGCTTGTTGAAAATG 59.241 36.000 24.35 6.88 0.00 2.32
6054 10624 5.759763 GTGAAATCCCAAGCTTGTTGAAAAT 59.240 36.000 24.35 10.87 0.00 1.82
6093 10663 7.280876 GGTTTCATTCTGCTAATGTGTATGAGA 59.719 37.037 10.77 0.00 0.00 3.27
6105 10675 2.742053 GTTCAGCGGTTTCATTCTGCTA 59.258 45.455 0.00 0.00 44.41 3.49
6115 10685 1.463444 GATGCTTACGTTCAGCGGTTT 59.537 47.619 13.13 0.95 46.52 3.27
6308 10880 1.748493 GCACACCCAAACACTTTGAGA 59.252 47.619 0.00 0.00 43.26 3.27
6350 10922 7.463119 CGAAACTCTAACTTACGTTTGTTGTGA 60.463 37.037 13.69 10.97 34.59 3.58
6351 10923 6.622183 CGAAACTCTAACTTACGTTTGTTGTG 59.378 38.462 13.69 8.21 34.59 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.