Multiple sequence alignment - TraesCS1B01G191300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G191300 chr1B 100.000 2273 0 0 1 2273 342121447 342123719 0.000000e+00 4198.0
1 TraesCS1B01G191300 chr1B 99.346 153 1 0 363 515 342121756 342121908 6.180000e-71 278.0
2 TraesCS1B01G191300 chr1B 99.346 153 1 0 310 462 342121809 342121961 6.180000e-71 278.0
3 TraesCS1B01G191300 chr1B 85.897 234 32 1 1 233 613948816 613948583 4.850000e-62 248.0
4 TraesCS1B01G191300 chr1B 92.029 138 11 0 1376 1513 176763749 176763612 6.410000e-46 195.0
5 TraesCS1B01G191300 chr1B 99.010 101 1 0 416 516 342121756 342121856 4.990000e-42 182.0
6 TraesCS1B01G191300 chr1B 99.010 101 1 0 310 410 342121862 342121962 4.990000e-42 182.0
7 TraesCS1B01G191300 chr1B 100.000 48 0 0 310 357 342121915 342121962 3.110000e-14 89.8
8 TraesCS1B01G191300 chr1D 92.462 597 26 9 803 1381 236808653 236809248 0.000000e+00 835.0
9 TraesCS1B01G191300 chr1D 92.157 408 15 4 1507 1913 236809242 236809633 5.480000e-156 560.0
10 TraesCS1B01G191300 chr5B 98.704 463 5 1 1 462 692366887 692367349 0.000000e+00 821.0
11 TraesCS1B01G191300 chr5B 98.387 434 5 1 363 794 692367197 692367630 0.000000e+00 761.0
12 TraesCS1B01G191300 chr5B 100.000 101 0 0 310 410 692367250 692367350 1.070000e-43 187.0
13 TraesCS1B01G191300 chr5B 100.000 48 0 0 310 357 692367303 692367350 3.110000e-14 89.8
14 TraesCS1B01G191300 chr1A 90.070 574 31 11 804 1369 308811608 308811053 0.000000e+00 721.0
15 TraesCS1B01G191300 chr1A 94.225 329 18 1 468 795 323962646 323962318 3.370000e-138 501.0
16 TraesCS1B01G191300 chr1A 91.643 347 21 2 1575 1913 308810991 308810645 7.350000e-130 473.0
17 TraesCS1B01G191300 chr1A 93.671 316 17 3 1 313 323962984 323962669 9.510000e-129 470.0
18 TraesCS1B01G191300 chr5A 95.266 338 15 1 464 800 612160345 612160008 3.320000e-148 534.0
19 TraesCS1B01G191300 chr5A 93.994 333 19 1 464 795 612160742 612160410 9.370000e-139 503.0
20 TraesCS1B01G191300 chr5A 93.949 314 18 1 1 313 612161074 612160761 7.350000e-130 473.0
21 TraesCS1B01G191300 chr5A 91.111 225 17 3 573 796 612160009 612159787 3.670000e-78 302.0
22 TraesCS1B01G191300 chr5A 83.183 333 49 4 472 800 481101252 481101581 4.750000e-77 298.0
23 TraesCS1B01G191300 chr5A 84.681 235 34 2 4 237 513969564 513969331 1.360000e-57 233.0
24 TraesCS1B01G191300 chr5A 92.647 136 10 0 1375 1510 32937938 32938073 1.780000e-46 196.0
25 TraesCS1B01G191300 chr5A 100.000 55 0 0 356 410 612160347 612160293 3.990000e-18 102.0
26 TraesCS1B01G191300 chr5A 100.000 54 0 0 409 462 612160347 612160294 1.440000e-17 100.0
27 TraesCS1B01G191300 chr5A 98.182 55 1 0 356 410 612160744 612160690 1.860000e-16 97.1
28 TraesCS1B01G191300 chr5A 98.148 54 1 0 409 462 612160744 612160691 6.680000e-16 95.3
29 TraesCS1B01G191300 chr5A 100.000 48 0 0 310 357 612160340 612160293 3.110000e-14 89.8
30 TraesCS1B01G191300 chr5A 97.917 48 1 0 310 357 612160737 612160690 1.450000e-12 84.2
31 TraesCS1B01G191300 chr5A 95.556 45 2 0 267 311 612160410 612160366 3.130000e-09 73.1
32 TraesCS1B01G191300 chr4A 94.721 341 14 2 464 800 6020190 6019850 5.560000e-146 527.0
33 TraesCS1B01G191300 chr4A 93.750 320 13 4 1 313 6020528 6020209 7.350000e-130 473.0
34 TraesCS1B01G191300 chr6D 90.769 260 15 4 2022 2273 439414648 439414390 2.800000e-89 339.0
35 TraesCS1B01G191300 chr7B 85.163 337 34 11 464 794 583929901 583930227 4.680000e-87 331.0
36 TraesCS1B01G191300 chr7B 84.615 338 36 11 464 795 583929228 583929555 2.820000e-84 322.0
37 TraesCS1B01G191300 chr7B 78.723 423 57 10 1 408 583928874 583929278 3.750000e-63 252.0
38 TraesCS1B01G191300 chr7B 78.302 424 58 11 1 408 583928236 583928641 2.260000e-60 243.0
39 TraesCS1B01G191300 chr7B 85.455 165 13 6 464 625 583928591 583928747 6.500000e-36 161.0
40 TraesCS1B01G191300 chr7B 93.478 46 3 0 310 355 583928596 583928641 4.050000e-08 69.4
41 TraesCS1B01G191300 chr5D 88.341 223 16 3 2059 2272 230420787 230420566 2.240000e-65 259.0
42 TraesCS1B01G191300 chr5D 91.549 142 10 2 1375 1514 485934442 485934583 6.410000e-46 195.0
43 TraesCS1B01G191300 chr5D 85.027 187 27 1 2021 2206 230419113 230419299 2.980000e-44 189.0
44 TraesCS1B01G191300 chr5D 83.838 198 26 4 2022 2215 518916752 518916557 1.390000e-42 183.0
45 TraesCS1B01G191300 chr5D 92.683 41 3 0 1942 1982 456566111 456566151 2.440000e-05 60.2
46 TraesCS1B01G191300 chr4B 78.538 424 57 10 1 408 47656119 47656524 4.850000e-62 248.0
47 TraesCS1B01G191300 chr4B 92.086 139 11 0 1375 1513 403331547 403331409 1.780000e-46 196.0
48 TraesCS1B01G191300 chr4B 92.086 139 10 1 1375 1512 214045489 214045351 6.410000e-46 195.0
49 TraesCS1B01G191300 chr2A 87.027 185 23 1 2022 2205 742303860 742303676 8.230000e-50 207.0
50 TraesCS1B01G191300 chr3A 93.893 131 8 0 1378 1508 732394967 732394837 4.950000e-47 198.0
51 TraesCS1B01G191300 chr2D 85.128 195 28 1 2022 2215 17160582 17160388 4.950000e-47 198.0
52 TraesCS1B01G191300 chr2D 85.263 190 22 4 2021 2206 13618916 13619103 8.290000e-45 191.0
53 TraesCS1B01G191300 chr7D 92.029 138 11 0 1375 1512 564074973 564074836 6.410000e-46 195.0
54 TraesCS1B01G191300 chr7A 90.541 148 13 1 1376 1522 681028441 681028294 6.410000e-46 195.0
55 TraesCS1B01G191300 chr7A 83.871 186 29 1 2022 2206 200598134 200598319 2.320000e-40 176.0
56 TraesCS1B01G191300 chr7A 82.383 193 30 4 2017 2206 149419980 149420171 5.020000e-37 165.0
57 TraesCS1B01G191300 chr3D 90.845 142 11 2 1375 1514 405859327 405859186 2.980000e-44 189.0
58 TraesCS1B01G191300 chr3B 91.429 105 9 0 1915 2019 467893167 467893271 6.540000e-31 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G191300 chr1B 342121447 342123719 2272 False 867.966667 4198 99.452000 1 2273 6 chr1B.!!$F1 2272
1 TraesCS1B01G191300 chr1D 236808653 236809633 980 False 697.500000 835 92.309500 803 1913 2 chr1D.!!$F1 1110
2 TraesCS1B01G191300 chr5B 692366887 692367630 743 False 464.700000 821 99.272750 1 794 4 chr5B.!!$F1 793
3 TraesCS1B01G191300 chr1A 308810645 308811608 963 True 597.000000 721 90.856500 804 1913 2 chr1A.!!$R1 1109
4 TraesCS1B01G191300 chr1A 323962318 323962984 666 True 485.500000 501 93.948000 1 795 2 chr1A.!!$R2 794
5 TraesCS1B01G191300 chr5A 612159787 612161074 1287 True 223.045455 534 96.738455 1 800 11 chr5A.!!$R2 799
6 TraesCS1B01G191300 chr4A 6019850 6020528 678 True 500.000000 527 94.235500 1 800 2 chr4A.!!$R1 799
7 TraesCS1B01G191300 chr7B 583928236 583930227 1991 False 229.733333 331 84.289333 1 795 6 chr7B.!!$F1 794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 1097 0.035439 TTTCCACCGATTGCTCCTCC 60.035 55.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 3257 0.037734 CCCCTAAGGCTTTGTTCGGT 59.962 55.0 4.45 0.0 0.0 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 175 3.702555 GAACACGTTCGCTGCGCT 61.703 61.111 18.65 0.00 0.00 5.92
434 1090 3.824414 GTGGTAAGTTTCCACCGATTG 57.176 47.619 18.35 0.00 46.63 2.67
435 1091 2.095415 GTGGTAAGTTTCCACCGATTGC 60.095 50.000 18.35 0.00 46.63 3.56
436 1092 2.224670 TGGTAAGTTTCCACCGATTGCT 60.225 45.455 0.00 0.00 37.66 3.91
437 1093 2.418976 GGTAAGTTTCCACCGATTGCTC 59.581 50.000 0.00 0.00 0.00 4.26
438 1094 1.534729 AAGTTTCCACCGATTGCTCC 58.465 50.000 0.00 0.00 0.00 4.70
439 1095 0.693049 AGTTTCCACCGATTGCTCCT 59.307 50.000 0.00 0.00 0.00 3.69
440 1096 1.087501 GTTTCCACCGATTGCTCCTC 58.912 55.000 0.00 0.00 0.00 3.71
441 1097 0.035439 TTTCCACCGATTGCTCCTCC 60.035 55.000 0.00 0.00 0.00 4.30
442 1098 2.202932 CCACCGATTGCTCCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
443 1099 2.892425 CACCGATTGCTCCTCCGC 60.892 66.667 0.00 0.00 0.00 5.54
444 1100 3.390521 ACCGATTGCTCCTCCGCA 61.391 61.111 0.00 0.00 38.31 5.69
445 1101 2.109799 CCGATTGCTCCTCCGCAT 59.890 61.111 0.00 0.00 40.04 4.73
446 1102 2.249535 CCGATTGCTCCTCCGCATG 61.250 63.158 0.00 0.00 40.04 4.06
447 1103 2.890109 CGATTGCTCCTCCGCATGC 61.890 63.158 7.91 7.91 40.04 4.06
448 1104 1.820906 GATTGCTCCTCCGCATGCA 60.821 57.895 19.57 0.00 40.04 3.96
449 1105 1.152819 ATTGCTCCTCCGCATGCAT 60.153 52.632 19.57 0.00 40.04 3.96
450 1106 1.452953 ATTGCTCCTCCGCATGCATG 61.453 55.000 22.70 22.70 40.04 4.06
451 1107 3.285215 GCTCCTCCGCATGCATGG 61.285 66.667 27.34 16.87 0.00 3.66
452 1108 2.191375 CTCCTCCGCATGCATGGT 59.809 61.111 27.34 0.00 0.00 3.55
453 1109 1.447217 CTCCTCCGCATGCATGGTA 59.553 57.895 27.34 4.69 0.00 3.25
454 1110 0.602106 CTCCTCCGCATGCATGGTAG 60.602 60.000 27.34 13.47 0.00 3.18
455 1111 1.146930 CCTCCGCATGCATGGTAGT 59.853 57.895 27.34 0.00 0.00 2.73
456 1112 0.464373 CCTCCGCATGCATGGTAGTT 60.464 55.000 27.34 0.00 0.00 2.24
457 1113 1.202639 CCTCCGCATGCATGGTAGTTA 60.203 52.381 27.34 0.00 0.00 2.24
458 1114 2.550855 CCTCCGCATGCATGGTAGTTAT 60.551 50.000 27.34 0.00 0.00 1.89
459 1115 3.141398 CTCCGCATGCATGGTAGTTATT 58.859 45.455 27.34 0.00 0.00 1.40
460 1116 3.550820 TCCGCATGCATGGTAGTTATTT 58.449 40.909 27.34 0.00 0.00 1.40
461 1117 3.951037 TCCGCATGCATGGTAGTTATTTT 59.049 39.130 27.34 0.00 0.00 1.82
462 1118 4.400884 TCCGCATGCATGGTAGTTATTTTT 59.599 37.500 27.34 0.00 0.00 1.94
463 1119 4.739716 CCGCATGCATGGTAGTTATTTTTC 59.260 41.667 27.34 5.51 0.00 2.29
464 1120 4.739716 CGCATGCATGGTAGTTATTTTTCC 59.260 41.667 27.34 5.09 0.00 3.13
465 1121 4.739716 GCATGCATGGTAGTTATTTTTCCG 59.260 41.667 27.34 0.00 0.00 4.30
466 1122 4.364415 TGCATGGTAGTTATTTTTCCGC 57.636 40.909 0.00 0.00 0.00 5.54
467 1123 3.181505 TGCATGGTAGTTATTTTTCCGCG 60.182 43.478 0.00 0.00 0.00 6.46
468 1124 3.181504 GCATGGTAGTTATTTTTCCGCGT 60.182 43.478 4.92 0.00 0.00 6.01
469 1125 4.339429 CATGGTAGTTATTTTTCCGCGTG 58.661 43.478 4.92 0.00 0.00 5.34
470 1126 2.743126 TGGTAGTTATTTTTCCGCGTGG 59.257 45.455 9.28 9.28 0.00 4.94
471 1127 2.743664 GGTAGTTATTTTTCCGCGTGGT 59.256 45.455 16.01 0.00 36.30 4.16
472 1128 3.932089 GGTAGTTATTTTTCCGCGTGGTA 59.068 43.478 16.01 1.53 36.30 3.25
473 1129 4.391523 GGTAGTTATTTTTCCGCGTGGTAA 59.608 41.667 16.01 9.21 36.30 2.85
474 1130 4.673534 AGTTATTTTTCCGCGTGGTAAG 57.326 40.909 16.01 0.00 36.30 2.34
475 1131 4.067192 AGTTATTTTTCCGCGTGGTAAGT 58.933 39.130 16.01 9.91 36.30 2.24
476 1132 4.516321 AGTTATTTTTCCGCGTGGTAAGTT 59.484 37.500 16.01 5.72 36.30 2.66
477 1133 3.994204 ATTTTTCCGCGTGGTAAGTTT 57.006 38.095 16.01 0.00 36.30 2.66
478 1134 3.337301 TTTTTCCGCGTGGTAAGTTTC 57.663 42.857 16.01 0.00 36.30 2.78
479 1135 1.228533 TTTCCGCGTGGTAAGTTTCC 58.771 50.000 16.01 0.00 36.30 3.13
480 1136 0.106335 TTCCGCGTGGTAAGTTTCCA 59.894 50.000 16.01 0.00 36.30 3.53
902 2636 2.350772 CGCATCTGTGTTCAAACCCTTC 60.351 50.000 0.00 0.00 0.00 3.46
986 2721 2.688958 AGTCGACGCTATAGCTTTTCCT 59.311 45.455 21.98 9.68 39.32 3.36
991 2728 5.528690 TCGACGCTATAGCTTTTCCTAAGTA 59.471 40.000 21.98 0.00 39.32 2.24
1065 2808 1.066787 GTCGCCCTTCTTCTGCTAGTT 60.067 52.381 0.00 0.00 0.00 2.24
1081 2824 0.250467 AGTTGACATGGCAAGCGTCT 60.250 50.000 16.10 5.13 0.00 4.18
1157 2900 3.001406 ACCGGCGAAGGGCTACTT 61.001 61.111 9.30 0.00 43.65 2.24
1197 2940 1.745115 GACGGCAAGGCAGCATACA 60.745 57.895 0.00 0.00 35.83 2.29
1237 2980 1.302832 CACAGGGTGTCCAAGAGGC 60.303 63.158 0.00 0.00 34.83 4.70
1275 3018 1.228063 CCCACTGCACAACTGAGCT 60.228 57.895 0.00 0.00 32.76 4.09
1276 3019 1.512996 CCCACTGCACAACTGAGCTG 61.513 60.000 0.00 4.85 36.84 4.24
1277 3020 1.281960 CACTGCACAACTGAGCTGC 59.718 57.895 0.00 0.00 34.90 5.25
1278 3021 1.147824 ACTGCACAACTGAGCTGCT 59.852 52.632 0.00 0.00 34.90 4.24
1322 3071 4.450053 CCTGCAAAGAGGAGAATTAGAGG 58.550 47.826 0.00 0.00 38.04 3.69
1358 3115 1.404717 CGGTCACCTTCATCTGAGTGG 60.405 57.143 0.00 1.32 0.00 4.00
1376 3139 6.533730 TGAGTGGATGTGAAATAGAACACTT 58.466 36.000 0.00 0.00 37.98 3.16
1377 3140 7.676004 TGAGTGGATGTGAAATAGAACACTTA 58.324 34.615 0.00 0.00 37.98 2.24
1378 3141 7.819415 TGAGTGGATGTGAAATAGAACACTTAG 59.181 37.037 0.00 0.00 37.98 2.18
1379 3142 7.106239 AGTGGATGTGAAATAGAACACTTAGG 58.894 38.462 0.00 0.00 34.59 2.69
1380 3143 6.316390 GTGGATGTGAAATAGAACACTTAGGG 59.684 42.308 0.00 0.00 37.81 3.53
1381 3144 5.297029 GGATGTGAAATAGAACACTTAGGGC 59.703 44.000 0.00 0.00 37.81 5.19
1382 3145 4.585879 TGTGAAATAGAACACTTAGGGCC 58.414 43.478 0.00 0.00 37.81 5.80
1383 3146 4.288626 TGTGAAATAGAACACTTAGGGCCT 59.711 41.667 12.58 12.58 37.81 5.19
1384 3147 4.636206 GTGAAATAGAACACTTAGGGCCTG 59.364 45.833 18.53 2.03 34.65 4.85
1385 3148 4.288626 TGAAATAGAACACTTAGGGCCTGT 59.711 41.667 18.53 2.84 0.00 4.00
1386 3149 4.929146 AATAGAACACTTAGGGCCTGTT 57.071 40.909 18.53 12.83 0.00 3.16
1387 3150 2.861147 AGAACACTTAGGGCCTGTTC 57.139 50.000 22.21 22.21 42.74 3.18
1388 3151 1.002087 AGAACACTTAGGGCCTGTTCG 59.998 52.381 22.95 10.82 45.61 3.95
1389 3152 0.036306 AACACTTAGGGCCTGTTCGG 59.964 55.000 18.53 4.35 0.00 4.30
1390 3153 1.125711 ACACTTAGGGCCTGTTCGGT 61.126 55.000 18.53 5.04 34.25 4.69
1391 3154 0.036306 CACTTAGGGCCTGTTCGGTT 59.964 55.000 18.53 0.00 34.25 4.44
1392 3155 0.036306 ACTTAGGGCCTGTTCGGTTG 59.964 55.000 18.53 0.00 34.25 3.77
1393 3156 0.323629 CTTAGGGCCTGTTCGGTTGA 59.676 55.000 18.53 0.00 34.25 3.18
1394 3157 0.035739 TTAGGGCCTGTTCGGTTGAC 59.964 55.000 18.53 0.00 34.25 3.18
1395 3158 1.122632 TAGGGCCTGTTCGGTTGACA 61.123 55.000 18.53 0.00 34.25 3.58
1396 3159 1.527380 GGGCCTGTTCGGTTGACAA 60.527 57.895 0.84 0.00 34.25 3.18
1397 3160 1.515521 GGGCCTGTTCGGTTGACAAG 61.516 60.000 0.84 0.00 34.25 3.16
1398 3161 1.515521 GGCCTGTTCGGTTGACAAGG 61.516 60.000 0.00 0.00 34.25 3.61
1399 3162 0.534203 GCCTGTTCGGTTGACAAGGA 60.534 55.000 0.00 0.00 34.25 3.36
1400 3163 1.961793 CCTGTTCGGTTGACAAGGAA 58.038 50.000 0.00 0.00 0.00 3.36
1401 3164 2.294074 CCTGTTCGGTTGACAAGGAAA 58.706 47.619 3.80 0.00 0.00 3.13
1402 3165 2.685897 CCTGTTCGGTTGACAAGGAAAA 59.314 45.455 3.80 0.00 0.00 2.29
1403 3166 3.317993 CCTGTTCGGTTGACAAGGAAAAT 59.682 43.478 3.80 0.00 0.00 1.82
1404 3167 4.290155 CTGTTCGGTTGACAAGGAAAATG 58.710 43.478 3.80 0.00 0.00 2.32
1405 3168 3.067461 TGTTCGGTTGACAAGGAAAATGG 59.933 43.478 3.80 0.00 0.00 3.16
1406 3169 2.938838 TCGGTTGACAAGGAAAATGGT 58.061 42.857 0.00 0.00 0.00 3.55
1407 3170 4.088056 TCGGTTGACAAGGAAAATGGTA 57.912 40.909 0.00 0.00 0.00 3.25
1408 3171 4.069304 TCGGTTGACAAGGAAAATGGTAG 58.931 43.478 0.00 0.00 0.00 3.18
1409 3172 3.190535 CGGTTGACAAGGAAAATGGTAGG 59.809 47.826 0.00 0.00 0.00 3.18
1410 3173 3.509967 GGTTGACAAGGAAAATGGTAGGG 59.490 47.826 0.00 0.00 0.00 3.53
1411 3174 4.149598 GTTGACAAGGAAAATGGTAGGGT 58.850 43.478 0.00 0.00 0.00 4.34
1412 3175 4.463050 TGACAAGGAAAATGGTAGGGTT 57.537 40.909 0.00 0.00 0.00 4.11
1413 3176 4.810345 TGACAAGGAAAATGGTAGGGTTT 58.190 39.130 0.00 0.00 0.00 3.27
1414 3177 4.586841 TGACAAGGAAAATGGTAGGGTTTG 59.413 41.667 0.00 0.00 0.00 2.93
1415 3178 3.901222 ACAAGGAAAATGGTAGGGTTTGG 59.099 43.478 0.00 0.00 0.00 3.28
1416 3179 2.536066 AGGAAAATGGTAGGGTTTGGC 58.464 47.619 0.00 0.00 0.00 4.52
1417 3180 2.158234 AGGAAAATGGTAGGGTTTGGCA 60.158 45.455 0.00 0.00 0.00 4.92
1418 3181 2.233676 GGAAAATGGTAGGGTTTGGCAG 59.766 50.000 0.00 0.00 0.00 4.85
1419 3182 1.937191 AAATGGTAGGGTTTGGCAGG 58.063 50.000 0.00 0.00 0.00 4.85
1420 3183 0.041090 AATGGTAGGGTTTGGCAGGG 59.959 55.000 0.00 0.00 0.00 4.45
1421 3184 0.849094 ATGGTAGGGTTTGGCAGGGA 60.849 55.000 0.00 0.00 0.00 4.20
1422 3185 0.849094 TGGTAGGGTTTGGCAGGGAT 60.849 55.000 0.00 0.00 0.00 3.85
1423 3186 0.335019 GGTAGGGTTTGGCAGGGATT 59.665 55.000 0.00 0.00 0.00 3.01
1424 3187 1.474330 GTAGGGTTTGGCAGGGATTG 58.526 55.000 0.00 0.00 0.00 2.67
1425 3188 0.334676 TAGGGTTTGGCAGGGATTGG 59.665 55.000 0.00 0.00 0.00 3.16
1432 3195 2.605299 GCAGGGATTGGCAGGGAT 59.395 61.111 0.00 0.00 0.00 3.85
1433 3196 1.075748 GCAGGGATTGGCAGGGATT 60.076 57.895 0.00 0.00 0.00 3.01
1434 3197 1.111715 GCAGGGATTGGCAGGGATTC 61.112 60.000 0.00 0.00 0.00 2.52
1435 3198 0.468771 CAGGGATTGGCAGGGATTCC 60.469 60.000 0.00 0.00 0.00 3.01
1436 3199 0.925720 AGGGATTGGCAGGGATTCCA 60.926 55.000 4.80 0.00 34.83 3.53
1437 3200 0.756815 GGGATTGGCAGGGATTCCAC 60.757 60.000 4.80 0.00 34.83 4.02
1438 3201 0.756815 GGATTGGCAGGGATTCCACC 60.757 60.000 4.80 3.47 34.83 4.61
1447 3210 2.959465 GGGATTCCACCCTCCATAAG 57.041 55.000 4.80 0.00 45.90 1.73
1448 3211 2.136026 GGGATTCCACCCTCCATAAGT 58.864 52.381 4.80 0.00 45.90 2.24
1449 3212 2.106684 GGGATTCCACCCTCCATAAGTC 59.893 54.545 4.80 0.00 45.90 3.01
1450 3213 2.777692 GGATTCCACCCTCCATAAGTCA 59.222 50.000 0.00 0.00 0.00 3.41
1451 3214 3.202151 GGATTCCACCCTCCATAAGTCAA 59.798 47.826 0.00 0.00 0.00 3.18
1452 3215 4.325030 GGATTCCACCCTCCATAAGTCAAA 60.325 45.833 0.00 0.00 0.00 2.69
1453 3216 4.733077 TTCCACCCTCCATAAGTCAAAA 57.267 40.909 0.00 0.00 0.00 2.44
1454 3217 4.028993 TCCACCCTCCATAAGTCAAAAC 57.971 45.455 0.00 0.00 0.00 2.43
1455 3218 3.089284 CCACCCTCCATAAGTCAAAACC 58.911 50.000 0.00 0.00 0.00 3.27
1456 3219 3.245264 CCACCCTCCATAAGTCAAAACCT 60.245 47.826 0.00 0.00 0.00 3.50
1457 3220 4.010349 CACCCTCCATAAGTCAAAACCTC 58.990 47.826 0.00 0.00 0.00 3.85
1458 3221 3.916989 ACCCTCCATAAGTCAAAACCTCT 59.083 43.478 0.00 0.00 0.00 3.69
1459 3222 4.354087 ACCCTCCATAAGTCAAAACCTCTT 59.646 41.667 0.00 0.00 0.00 2.85
1460 3223 4.944317 CCCTCCATAAGTCAAAACCTCTTC 59.056 45.833 0.00 0.00 0.00 2.87
1461 3224 4.944317 CCTCCATAAGTCAAAACCTCTTCC 59.056 45.833 0.00 0.00 0.00 3.46
1462 3225 5.514834 CCTCCATAAGTCAAAACCTCTTCCA 60.515 44.000 0.00 0.00 0.00 3.53
1463 3226 5.947663 TCCATAAGTCAAAACCTCTTCCAA 58.052 37.500 0.00 0.00 0.00 3.53
1464 3227 6.552008 TCCATAAGTCAAAACCTCTTCCAAT 58.448 36.000 0.00 0.00 0.00 3.16
1465 3228 6.659242 TCCATAAGTCAAAACCTCTTCCAATC 59.341 38.462 0.00 0.00 0.00 2.67
1466 3229 6.127619 CCATAAGTCAAAACCTCTTCCAATCC 60.128 42.308 0.00 0.00 0.00 3.01
1467 3230 4.453480 AGTCAAAACCTCTTCCAATCCA 57.547 40.909 0.00 0.00 0.00 3.41
1468 3231 5.003096 AGTCAAAACCTCTTCCAATCCAT 57.997 39.130 0.00 0.00 0.00 3.41
1469 3232 5.012893 AGTCAAAACCTCTTCCAATCCATC 58.987 41.667 0.00 0.00 0.00 3.51
1470 3233 4.158579 GTCAAAACCTCTTCCAATCCATCC 59.841 45.833 0.00 0.00 0.00 3.51
1471 3234 3.388552 AAACCTCTTCCAATCCATCCC 57.611 47.619 0.00 0.00 0.00 3.85
1472 3235 1.985622 ACCTCTTCCAATCCATCCCA 58.014 50.000 0.00 0.00 0.00 4.37
1473 3236 2.287584 ACCTCTTCCAATCCATCCCAA 58.712 47.619 0.00 0.00 0.00 4.12
1474 3237 2.861317 ACCTCTTCCAATCCATCCCAAT 59.139 45.455 0.00 0.00 0.00 3.16
1475 3238 3.117360 ACCTCTTCCAATCCATCCCAATC 60.117 47.826 0.00 0.00 0.00 2.67
1476 3239 3.494332 CTCTTCCAATCCATCCCAATCC 58.506 50.000 0.00 0.00 0.00 3.01
1477 3240 2.177669 TCTTCCAATCCATCCCAATCCC 59.822 50.000 0.00 0.00 0.00 3.85
1478 3241 0.859760 TCCAATCCATCCCAATCCCC 59.140 55.000 0.00 0.00 0.00 4.81
1479 3242 0.178924 CCAATCCATCCCAATCCCCC 60.179 60.000 0.00 0.00 0.00 5.40
1480 3243 0.862554 CAATCCATCCCAATCCCCCT 59.137 55.000 0.00 0.00 0.00 4.79
1481 3244 0.862554 AATCCATCCCAATCCCCCTG 59.137 55.000 0.00 0.00 0.00 4.45
1482 3245 0.329831 ATCCATCCCAATCCCCCTGT 60.330 55.000 0.00 0.00 0.00 4.00
1483 3246 1.231068 CCATCCCAATCCCCCTGTG 59.769 63.158 0.00 0.00 0.00 3.66
1484 3247 1.288508 CCATCCCAATCCCCCTGTGA 61.289 60.000 0.00 0.00 0.00 3.58
1485 3248 0.184451 CATCCCAATCCCCCTGTGAG 59.816 60.000 0.00 0.00 0.00 3.51
1486 3249 0.995675 ATCCCAATCCCCCTGTGAGG 60.996 60.000 0.00 0.00 34.30 3.86
1487 3250 1.619363 CCCAATCCCCCTGTGAGGA 60.619 63.158 0.00 0.00 37.67 3.71
1488 3251 1.639635 CCCAATCCCCCTGTGAGGAG 61.640 65.000 0.00 0.00 37.67 3.69
1489 3252 1.639635 CCAATCCCCCTGTGAGGAGG 61.640 65.000 0.00 0.00 37.67 4.30
1490 3253 0.916358 CAATCCCCCTGTGAGGAGGT 60.916 60.000 0.00 0.00 37.67 3.85
1491 3254 0.916358 AATCCCCCTGTGAGGAGGTG 60.916 60.000 0.00 0.00 37.67 4.00
1492 3255 2.125066 ATCCCCCTGTGAGGAGGTGT 62.125 60.000 0.00 0.00 37.67 4.16
1493 3256 1.080354 CCCCCTGTGAGGAGGTGTA 59.920 63.158 0.00 0.00 37.67 2.90
1494 3257 0.546747 CCCCCTGTGAGGAGGTGTAA 60.547 60.000 0.00 0.00 37.67 2.41
1495 3258 0.613777 CCCCTGTGAGGAGGTGTAAC 59.386 60.000 0.00 0.00 37.67 2.50
1496 3259 0.613777 CCCTGTGAGGAGGTGTAACC 59.386 60.000 0.00 0.00 45.56 2.85
1528 3291 5.477637 GCCTTAGGGGTATAGAAGTACTCTG 59.522 48.000 0.00 0.00 34.89 3.35
1530 3293 6.716173 CCTTAGGGGTATAGAAGTACTCTGTC 59.284 46.154 0.00 0.00 35.41 3.51
1531 3294 5.998128 AGGGGTATAGAAGTACTCTGTCT 57.002 43.478 0.00 0.00 35.41 3.41
1532 3295 5.697067 AGGGGTATAGAAGTACTCTGTCTG 58.303 45.833 5.92 0.00 35.41 3.51
1533 3296 5.194132 AGGGGTATAGAAGTACTCTGTCTGT 59.806 44.000 5.92 2.41 35.41 3.41
1534 3297 6.389278 AGGGGTATAGAAGTACTCTGTCTGTA 59.611 42.308 5.92 1.54 35.41 2.74
1536 3299 7.724951 GGGGTATAGAAGTACTCTGTCTGTAAT 59.275 40.741 5.92 0.00 35.41 1.89
1537 3300 9.790344 GGGTATAGAAGTACTCTGTCTGTAATA 57.210 37.037 5.92 0.00 35.41 0.98
1574 3337 7.419204 CAGTTAAACAAGTAAAATGGGAACGA 58.581 34.615 0.00 0.00 0.00 3.85
1603 3366 2.971452 GACTCTCCGGGTGTCCAC 59.029 66.667 0.00 0.00 33.72 4.02
1626 3389 5.153513 CGGTGGAAAATGTACTGAAATGTG 58.846 41.667 0.00 0.00 0.00 3.21
1647 3417 4.150451 GTGTGCAAATGTGTTTATTGGAGC 59.850 41.667 0.00 0.00 0.00 4.70
1799 3569 2.684881 CAATCCAAGCAGGTACATGGAC 59.315 50.000 9.91 0.00 44.25 4.02
1800 3570 1.357137 TCCAAGCAGGTACATGGACA 58.643 50.000 10.99 0.00 37.05 4.02
1874 3644 9.839817 TTTAAATATCCCGTTCTTCATACATCA 57.160 29.630 0.00 0.00 0.00 3.07
1877 3647 5.551305 ATCCCGTTCTTCATACATCATCA 57.449 39.130 0.00 0.00 0.00 3.07
1881 3651 6.657117 TCCCGTTCTTCATACATCATCAAAAA 59.343 34.615 0.00 0.00 0.00 1.94
1913 3683 8.380099 TGATTGTTTATTCAGTTAGGTGGTAGT 58.620 33.333 0.00 0.00 0.00 2.73
1914 3684 9.227777 GATTGTTTATTCAGTTAGGTGGTAGTT 57.772 33.333 0.00 0.00 0.00 2.24
1915 3685 8.983702 TTGTTTATTCAGTTAGGTGGTAGTTT 57.016 30.769 0.00 0.00 0.00 2.66
1916 3686 8.983702 TGTTTATTCAGTTAGGTGGTAGTTTT 57.016 30.769 0.00 0.00 0.00 2.43
1917 3687 9.411189 TGTTTATTCAGTTAGGTGGTAGTTTTT 57.589 29.630 0.00 0.00 0.00 1.94
1950 3720 3.467776 GGCTTACCTCTTGCCTCTG 57.532 57.895 0.00 0.00 43.05 3.35
1951 3721 0.746204 GGCTTACCTCTTGCCTCTGC 60.746 60.000 0.00 0.00 43.05 4.26
1972 3742 4.413495 CATCAATCGATGCATGCATACA 57.587 40.909 32.27 21.48 42.54 2.29
1973 3743 4.981794 CATCAATCGATGCATGCATACAT 58.018 39.130 32.27 22.67 42.54 2.29
1974 3744 6.114221 CATCAATCGATGCATGCATACATA 57.886 37.500 32.27 17.83 42.54 2.29
1975 3745 6.725246 CATCAATCGATGCATGCATACATAT 58.275 36.000 32.27 19.15 42.54 1.78
1976 3746 6.746745 TCAATCGATGCATGCATACATATT 57.253 33.333 32.27 23.06 36.70 1.28
1977 3747 7.846644 TCAATCGATGCATGCATACATATTA 57.153 32.000 32.27 13.11 36.70 0.98
1978 3748 8.441312 TCAATCGATGCATGCATACATATTAT 57.559 30.769 32.27 14.65 36.70 1.28
1979 3749 8.895737 TCAATCGATGCATGCATACATATTATT 58.104 29.630 32.27 18.83 36.70 1.40
2007 3777 9.811995 AAATTAAAACAAGGTCTTAAGTTCCAC 57.188 29.630 16.98 3.58 0.00 4.02
2008 3778 5.494632 AAAACAAGGTCTTAAGTTCCACG 57.505 39.130 16.98 11.52 0.00 4.94
2009 3779 3.121738 ACAAGGTCTTAAGTTCCACGG 57.878 47.619 16.98 10.48 0.00 4.94
2010 3780 2.701951 ACAAGGTCTTAAGTTCCACGGA 59.298 45.455 16.98 0.00 0.00 4.69
2011 3781 3.244112 ACAAGGTCTTAAGTTCCACGGAG 60.244 47.826 16.98 7.86 0.00 4.63
2012 3782 2.885616 AGGTCTTAAGTTCCACGGAGA 58.114 47.619 16.98 0.00 0.00 3.71
2013 3783 2.561858 AGGTCTTAAGTTCCACGGAGAC 59.438 50.000 16.98 0.00 34.32 3.36
2014 3784 2.561858 GGTCTTAAGTTCCACGGAGACT 59.438 50.000 1.63 0.00 35.18 3.24
2015 3785 3.367190 GGTCTTAAGTTCCACGGAGACTC 60.367 52.174 1.63 0.00 35.18 3.36
2016 3786 3.255149 GTCTTAAGTTCCACGGAGACTCA 59.745 47.826 4.53 0.00 32.79 3.41
2017 3787 3.893200 TCTTAAGTTCCACGGAGACTCAA 59.107 43.478 4.53 0.00 0.00 3.02
2018 3788 4.342951 TCTTAAGTTCCACGGAGACTCAAA 59.657 41.667 4.53 0.00 0.00 2.69
2019 3789 2.821991 AGTTCCACGGAGACTCAAAG 57.178 50.000 4.53 0.00 0.00 2.77
2020 3790 2.040178 AGTTCCACGGAGACTCAAAGT 58.960 47.619 4.53 0.00 0.00 2.66
2021 3791 2.135933 GTTCCACGGAGACTCAAAGTG 58.864 52.381 14.33 14.33 0.00 3.16
2022 3792 1.699730 TCCACGGAGACTCAAAGTGA 58.300 50.000 19.83 8.64 35.03 3.41
2036 3806 6.099579 CTCAAAGTGAGTCAATTACATCGG 57.900 41.667 6.20 0.00 39.58 4.18
2037 3807 5.547465 TCAAAGTGAGTCAATTACATCGGT 58.453 37.500 6.20 0.00 0.00 4.69
2038 3808 5.408299 TCAAAGTGAGTCAATTACATCGGTG 59.592 40.000 6.20 0.00 0.00 4.94
2039 3809 3.861840 AGTGAGTCAATTACATCGGTGG 58.138 45.455 0.00 0.00 0.00 4.61
2040 3810 3.260884 AGTGAGTCAATTACATCGGTGGT 59.739 43.478 0.00 0.00 0.00 4.16
2041 3811 3.370978 GTGAGTCAATTACATCGGTGGTG 59.629 47.826 0.00 0.00 0.00 4.17
2042 3812 2.351726 GAGTCAATTACATCGGTGGTGC 59.648 50.000 0.00 0.00 0.00 5.01
2043 3813 2.027192 AGTCAATTACATCGGTGGTGCT 60.027 45.455 0.00 0.00 0.00 4.40
2044 3814 3.196901 AGTCAATTACATCGGTGGTGCTA 59.803 43.478 0.00 0.00 0.00 3.49
2045 3815 3.555956 GTCAATTACATCGGTGGTGCTAG 59.444 47.826 0.00 0.00 0.00 3.42
2046 3816 3.449377 TCAATTACATCGGTGGTGCTAGA 59.551 43.478 0.00 0.00 0.00 2.43
2047 3817 4.081365 TCAATTACATCGGTGGTGCTAGAA 60.081 41.667 0.00 0.00 0.00 2.10
2048 3818 2.953466 TACATCGGTGGTGCTAGAAC 57.047 50.000 0.00 0.00 0.00 3.01
2049 3819 1.267121 ACATCGGTGGTGCTAGAACT 58.733 50.000 0.00 0.00 0.00 3.01
2050 3820 1.623811 ACATCGGTGGTGCTAGAACTT 59.376 47.619 0.00 0.00 0.00 2.66
2051 3821 2.002586 CATCGGTGGTGCTAGAACTTG 58.997 52.381 0.00 0.00 0.00 3.16
2052 3822 0.320374 TCGGTGGTGCTAGAACTTGG 59.680 55.000 0.00 0.00 0.00 3.61
2053 3823 1.298859 CGGTGGTGCTAGAACTTGGC 61.299 60.000 0.00 0.00 0.00 4.52
2054 3824 0.250727 GGTGGTGCTAGAACTTGGCA 60.251 55.000 0.00 0.00 0.00 4.92
2055 3825 1.614317 GGTGGTGCTAGAACTTGGCAT 60.614 52.381 0.00 0.00 38.27 4.40
2056 3826 2.355716 GGTGGTGCTAGAACTTGGCATA 60.356 50.000 0.00 0.00 38.27 3.14
2057 3827 3.343617 GTGGTGCTAGAACTTGGCATAA 58.656 45.455 0.00 0.00 38.27 1.90
2058 3828 3.756434 GTGGTGCTAGAACTTGGCATAAA 59.244 43.478 0.00 0.00 38.27 1.40
2059 3829 3.756434 TGGTGCTAGAACTTGGCATAAAC 59.244 43.478 0.00 0.00 38.27 2.01
2060 3830 3.181510 GGTGCTAGAACTTGGCATAAACG 60.182 47.826 0.00 0.00 38.27 3.60
2061 3831 3.682858 GTGCTAGAACTTGGCATAAACGA 59.317 43.478 0.00 0.00 38.27 3.85
2062 3832 4.332819 GTGCTAGAACTTGGCATAAACGAT 59.667 41.667 0.00 0.00 38.27 3.73
2063 3833 4.570772 TGCTAGAACTTGGCATAAACGATC 59.429 41.667 0.00 0.00 0.00 3.69
2064 3834 4.024809 GCTAGAACTTGGCATAAACGATCC 60.025 45.833 0.00 0.00 0.00 3.36
2065 3835 3.279434 AGAACTTGGCATAAACGATCCC 58.721 45.455 0.00 0.00 0.00 3.85
2066 3836 3.054361 AGAACTTGGCATAAACGATCCCT 60.054 43.478 0.00 0.00 0.00 4.20
2067 3837 3.366052 ACTTGGCATAAACGATCCCTT 57.634 42.857 0.00 0.00 0.00 3.95
2068 3838 3.697166 ACTTGGCATAAACGATCCCTTT 58.303 40.909 0.00 0.00 0.00 3.11
2069 3839 4.850680 ACTTGGCATAAACGATCCCTTTA 58.149 39.130 0.00 0.00 0.00 1.85
2070 3840 4.881850 ACTTGGCATAAACGATCCCTTTAG 59.118 41.667 0.00 0.00 0.00 1.85
2071 3841 3.211045 TGGCATAAACGATCCCTTTAGC 58.789 45.455 0.00 0.00 0.00 3.09
2072 3842 2.223377 GGCATAAACGATCCCTTTAGCG 59.777 50.000 0.00 0.00 0.00 4.26
2073 3843 2.349532 GCATAAACGATCCCTTTAGCGC 60.350 50.000 0.00 0.00 0.00 5.92
2074 3844 2.973694 TAAACGATCCCTTTAGCGCT 57.026 45.000 17.26 17.26 0.00 5.92
2075 3845 2.973694 AAACGATCCCTTTAGCGCTA 57.026 45.000 14.45 14.45 0.00 4.26
2076 3846 2.510768 AACGATCCCTTTAGCGCTAG 57.489 50.000 17.98 8.85 0.00 3.42
2077 3847 1.688772 ACGATCCCTTTAGCGCTAGA 58.311 50.000 17.98 12.64 0.00 2.43
2078 3848 2.029623 ACGATCCCTTTAGCGCTAGAA 58.970 47.619 17.98 13.34 0.00 2.10
2079 3849 2.223758 ACGATCCCTTTAGCGCTAGAAC 60.224 50.000 17.98 9.14 0.00 3.01
2080 3850 2.034812 CGATCCCTTTAGCGCTAGAACT 59.965 50.000 17.98 1.74 0.00 3.01
2081 3851 3.491104 CGATCCCTTTAGCGCTAGAACTT 60.491 47.826 17.98 2.50 0.00 2.66
2082 3852 3.247006 TCCCTTTAGCGCTAGAACTTG 57.753 47.619 17.98 5.90 0.00 3.16
2083 3853 2.565834 TCCCTTTAGCGCTAGAACTTGT 59.434 45.455 17.98 0.00 0.00 3.16
2084 3854 2.673368 CCCTTTAGCGCTAGAACTTGTG 59.327 50.000 17.98 0.00 0.00 3.33
2085 3855 2.673368 CCTTTAGCGCTAGAACTTGTGG 59.327 50.000 17.98 5.79 0.00 4.17
2086 3856 3.326747 CTTTAGCGCTAGAACTTGTGGT 58.673 45.455 17.98 6.72 0.00 4.16
2087 3857 2.363788 TAGCGCTAGAACTTGTGGTG 57.636 50.000 14.45 0.00 0.00 4.17
2088 3858 0.393077 AGCGCTAGAACTTGTGGTGT 59.607 50.000 8.99 0.00 0.00 4.16
2089 3859 1.616865 AGCGCTAGAACTTGTGGTGTA 59.383 47.619 8.99 0.00 0.00 2.90
2090 3860 1.725164 GCGCTAGAACTTGTGGTGTAC 59.275 52.381 0.00 0.00 0.00 2.90
2091 3861 2.864882 GCGCTAGAACTTGTGGTGTACA 60.865 50.000 0.00 0.00 37.56 2.90
2092 3862 3.585862 CGCTAGAACTTGTGGTGTACAT 58.414 45.455 0.00 0.00 39.48 2.29
2093 3863 3.612860 CGCTAGAACTTGTGGTGTACATC 59.387 47.826 0.00 0.00 39.48 3.06
2094 3864 3.612860 GCTAGAACTTGTGGTGTACATCG 59.387 47.826 0.00 0.00 39.48 3.84
2095 3865 4.617530 GCTAGAACTTGTGGTGTACATCGA 60.618 45.833 0.00 0.00 39.48 3.59
2096 3866 4.330944 AGAACTTGTGGTGTACATCGAA 57.669 40.909 0.00 0.00 39.48 3.71
2097 3867 4.307432 AGAACTTGTGGTGTACATCGAAG 58.693 43.478 13.56 13.56 39.48 3.79
2098 3868 3.746045 ACTTGTGGTGTACATCGAAGT 57.254 42.857 14.60 14.60 39.48 3.01
2099 3869 3.390135 ACTTGTGGTGTACATCGAAGTG 58.610 45.455 18.02 4.16 39.48 3.16
2100 3870 2.448926 TGTGGTGTACATCGAAGTGG 57.551 50.000 3.02 0.00 33.42 4.00
2101 3871 1.689813 TGTGGTGTACATCGAAGTGGT 59.310 47.619 3.02 0.00 33.42 4.16
2102 3872 2.066262 GTGGTGTACATCGAAGTGGTG 58.934 52.381 3.02 0.00 0.00 4.17
2103 3873 1.076332 GGTGTACATCGAAGTGGTGC 58.924 55.000 3.02 0.00 0.00 5.01
2104 3874 1.606994 GGTGTACATCGAAGTGGTGCA 60.607 52.381 3.02 0.34 0.00 4.57
2105 3875 2.139917 GTGTACATCGAAGTGGTGCAA 58.860 47.619 3.02 0.00 31.43 4.08
2106 3876 2.546368 GTGTACATCGAAGTGGTGCAAA 59.454 45.455 3.02 0.00 31.43 3.68
2107 3877 3.002862 GTGTACATCGAAGTGGTGCAAAA 59.997 43.478 3.02 0.00 31.43 2.44
2108 3878 3.628032 TGTACATCGAAGTGGTGCAAAAA 59.372 39.130 3.02 0.00 0.00 1.94
2109 3879 3.078594 ACATCGAAGTGGTGCAAAAAC 57.921 42.857 0.00 0.00 0.00 2.43
2110 3880 2.687935 ACATCGAAGTGGTGCAAAAACT 59.312 40.909 0.00 0.00 0.00 2.66
2111 3881 3.243068 ACATCGAAGTGGTGCAAAAACTC 60.243 43.478 0.00 0.00 0.00 3.01
2112 3882 1.329292 TCGAAGTGGTGCAAAAACTCG 59.671 47.619 0.00 0.00 0.00 4.18
2113 3883 1.596954 CGAAGTGGTGCAAAAACTCGG 60.597 52.381 0.00 0.00 0.00 4.63
2114 3884 0.102300 AAGTGGTGCAAAAACTCGGC 59.898 50.000 0.00 0.00 0.00 5.54
2115 3885 0.751643 AGTGGTGCAAAAACTCGGCT 60.752 50.000 0.00 0.00 0.00 5.52
2116 3886 0.317854 GTGGTGCAAAAACTCGGCTC 60.318 55.000 0.00 0.00 0.00 4.70
2117 3887 1.082104 GGTGCAAAAACTCGGCTCG 60.082 57.895 0.00 0.00 0.00 5.03
2118 3888 1.503818 GGTGCAAAAACTCGGCTCGA 61.504 55.000 0.00 0.00 0.00 4.04
2127 3897 4.656117 TCGGCTCGAGCGTGCAAA 62.656 61.111 29.81 9.35 43.26 3.68
2128 3898 3.490759 CGGCTCGAGCGTGCAAAT 61.491 61.111 29.81 0.00 43.26 2.32
2129 3899 2.164663 CGGCTCGAGCGTGCAAATA 61.165 57.895 29.81 0.00 43.26 1.40
2130 3900 1.348594 GGCTCGAGCGTGCAAATAC 59.651 57.895 29.81 9.93 43.26 1.89
2131 3901 1.013323 GCTCGAGCGTGCAAATACG 60.013 57.895 23.61 0.00 46.28 3.06
2132 3902 1.631072 CTCGAGCGTGCAAATACGG 59.369 57.895 0.00 0.00 43.87 4.02
2136 3906 2.867472 GCGTGCAAATACGGTGCT 59.133 55.556 0.00 0.00 43.87 4.40
2137 3907 2.083183 GCGTGCAAATACGGTGCTA 58.917 52.632 0.00 0.00 43.87 3.49
2138 3908 0.444651 GCGTGCAAATACGGTGCTAA 59.555 50.000 0.00 0.00 43.87 3.09
2139 3909 1.063469 GCGTGCAAATACGGTGCTAAT 59.937 47.619 0.00 0.00 43.87 1.73
2140 3910 2.849502 GCGTGCAAATACGGTGCTAATC 60.850 50.000 0.00 0.00 43.87 1.75
2141 3911 2.596575 CGTGCAAATACGGTGCTAATCG 60.597 50.000 0.00 0.00 42.69 3.34
2142 3912 2.350498 GTGCAAATACGGTGCTAATCGT 59.650 45.455 0.00 0.00 42.69 3.73
2143 3913 2.350192 TGCAAATACGGTGCTAATCGTG 59.650 45.455 0.00 0.00 42.69 4.35
2144 3914 2.350498 GCAAATACGGTGCTAATCGTGT 59.650 45.455 0.00 0.00 40.05 4.49
2145 3915 3.181514 GCAAATACGGTGCTAATCGTGTT 60.182 43.478 0.00 0.00 41.16 3.32
2146 3916 4.670735 GCAAATACGGTGCTAATCGTGTTT 60.671 41.667 1.15 1.15 46.13 2.83
2147 3917 4.593597 AATACGGTGCTAATCGTGTTTG 57.406 40.909 0.00 0.00 37.41 2.93
2148 3918 1.873698 ACGGTGCTAATCGTGTTTGT 58.126 45.000 0.00 0.00 38.25 2.83
2149 3919 3.029320 ACGGTGCTAATCGTGTTTGTA 57.971 42.857 0.00 0.00 38.25 2.41
2150 3920 3.592059 ACGGTGCTAATCGTGTTTGTAT 58.408 40.909 0.00 0.00 38.25 2.29
2151 3921 4.746729 ACGGTGCTAATCGTGTTTGTATA 58.253 39.130 0.00 0.00 38.25 1.47
2152 3922 4.563976 ACGGTGCTAATCGTGTTTGTATAC 59.436 41.667 0.00 0.00 38.25 1.47
2153 3923 4.316861 CGGTGCTAATCGTGTTTGTATACG 60.317 45.833 0.00 0.00 39.85 3.06
2154 3924 4.026310 GGTGCTAATCGTGTTTGTATACGG 60.026 45.833 0.00 0.00 39.10 4.02
2155 3925 4.799949 GTGCTAATCGTGTTTGTATACGGA 59.200 41.667 0.00 0.00 39.10 4.69
2156 3926 5.289193 GTGCTAATCGTGTTTGTATACGGAA 59.711 40.000 0.00 0.00 39.10 4.30
2157 3927 5.517411 TGCTAATCGTGTTTGTATACGGAAG 59.483 40.000 0.00 0.00 39.10 3.46
2158 3928 4.852609 AATCGTGTTTGTATACGGAAGC 57.147 40.909 0.00 0.00 39.10 3.86
2159 3929 3.300852 TCGTGTTTGTATACGGAAGCA 57.699 42.857 0.00 0.00 39.10 3.91
2160 3930 2.988493 TCGTGTTTGTATACGGAAGCAC 59.012 45.455 10.87 10.87 39.10 4.40
2161 3931 2.732500 CGTGTTTGTATACGGAAGCACA 59.267 45.455 17.28 4.86 35.53 4.57
2162 3932 3.422603 CGTGTTTGTATACGGAAGCACAC 60.423 47.826 17.28 12.70 35.53 3.82
2163 3933 3.744426 GTGTTTGTATACGGAAGCACACT 59.256 43.478 14.22 0.00 34.48 3.55
2164 3934 3.743911 TGTTTGTATACGGAAGCACACTG 59.256 43.478 0.00 0.00 0.00 3.66
2165 3935 3.945981 TTGTATACGGAAGCACACTGA 57.054 42.857 0.00 0.00 0.00 3.41
2166 3936 3.226346 TGTATACGGAAGCACACTGAC 57.774 47.619 0.00 0.00 0.00 3.51
2167 3937 2.182825 GTATACGGAAGCACACTGACG 58.817 52.381 0.00 0.00 33.50 4.35
2168 3938 0.885879 ATACGGAAGCACACTGACGA 59.114 50.000 0.00 0.00 32.16 4.20
2169 3939 0.039798 TACGGAAGCACACTGACGAC 60.040 55.000 0.00 0.00 32.16 4.34
2170 3940 2.365068 CGGAAGCACACTGACGACG 61.365 63.158 0.00 0.00 0.00 5.12
2171 3941 2.658707 GGAAGCACACTGACGACGC 61.659 63.158 0.00 0.00 0.00 5.19
2172 3942 1.949133 GAAGCACACTGACGACGCA 60.949 57.895 0.00 0.00 0.00 5.24
2173 3943 1.284982 GAAGCACACTGACGACGCAT 61.285 55.000 0.00 0.00 0.00 4.73
2174 3944 1.560004 AAGCACACTGACGACGCATG 61.560 55.000 0.00 0.00 0.00 4.06
2175 3945 2.471607 CACACTGACGACGCATGC 59.528 61.111 7.91 7.91 0.00 4.06
2176 3946 2.738521 ACACTGACGACGCATGCC 60.739 61.111 13.15 0.00 0.00 4.40
2177 3947 2.738139 CACTGACGACGCATGCCA 60.738 61.111 13.15 2.48 0.00 4.92
2178 3948 2.030412 ACTGACGACGCATGCCAA 59.970 55.556 13.15 0.00 0.00 4.52
2179 3949 2.317609 ACTGACGACGCATGCCAAC 61.318 57.895 13.15 2.68 0.00 3.77
2180 3950 3.353114 CTGACGACGCATGCCAACG 62.353 63.158 13.15 16.88 0.00 4.10
2181 3951 3.411351 GACGACGCATGCCAACGT 61.411 61.111 23.90 23.90 46.91 3.99
2182 3952 3.629491 GACGACGCATGCCAACGTG 62.629 63.158 27.00 10.59 43.71 4.49
2183 3953 4.444024 CGACGCATGCCAACGTGG 62.444 66.667 13.15 1.35 43.71 4.94
2202 3972 2.203153 GTGGGGCACGTTGTCAGT 60.203 61.111 0.00 0.00 0.00 3.41
2203 3973 2.203139 TGGGGCACGTTGTCAGTG 60.203 61.111 0.00 0.00 42.15 3.66
2204 3974 2.110213 GGGGCACGTTGTCAGTGA 59.890 61.111 0.07 0.00 41.83 3.41
2205 3975 2.251642 GGGGCACGTTGTCAGTGAC 61.252 63.158 16.68 16.68 46.44 3.67
2206 3976 4.118480 GGCACGTTGTCAGTGACA 57.882 55.556 22.06 22.06 46.41 3.58
2218 3988 6.389830 TTGTCAGTGACAATACAATGCTTT 57.610 33.333 30.31 0.00 45.88 3.51
2219 3989 6.389830 TGTCAGTGACAATACAATGCTTTT 57.610 33.333 23.55 0.00 39.78 2.27
2220 3990 6.804677 TGTCAGTGACAATACAATGCTTTTT 58.195 32.000 23.55 0.00 39.78 1.94
2239 4009 4.993029 TTTTTGTGAAAATCACCTCGGT 57.007 36.364 7.94 0.00 46.40 4.69
2240 4010 3.980646 TTTGTGAAAATCACCTCGGTG 57.019 42.857 9.82 9.82 46.40 4.94
2241 4011 2.631160 TGTGAAAATCACCTCGGTGT 57.369 45.000 15.20 1.26 46.40 4.16
2242 4012 2.925724 TGTGAAAATCACCTCGGTGTT 58.074 42.857 15.20 4.98 46.40 3.32
2243 4013 3.283751 TGTGAAAATCACCTCGGTGTTT 58.716 40.909 15.20 10.70 46.40 2.83
2244 4014 3.697045 TGTGAAAATCACCTCGGTGTTTT 59.303 39.130 19.62 19.62 46.40 2.43
2262 4032 1.419381 TTTTCCACAGAAAAGCCCCC 58.581 50.000 0.00 0.00 44.99 5.40
2263 4033 0.825840 TTTCCACAGAAAAGCCCCCG 60.826 55.000 0.00 0.00 39.05 5.73
2264 4034 1.710996 TTCCACAGAAAAGCCCCCGA 61.711 55.000 0.00 0.00 0.00 5.14
2265 4035 1.971695 CCACAGAAAAGCCCCCGAC 60.972 63.158 0.00 0.00 0.00 4.79
2266 4036 1.228124 CACAGAAAAGCCCCCGACA 60.228 57.895 0.00 0.00 0.00 4.35
2267 4037 0.821711 CACAGAAAAGCCCCCGACAA 60.822 55.000 0.00 0.00 0.00 3.18
2268 4038 0.106419 ACAGAAAAGCCCCCGACAAA 60.106 50.000 0.00 0.00 0.00 2.83
2269 4039 1.036707 CAGAAAAGCCCCCGACAAAA 58.963 50.000 0.00 0.00 0.00 2.44
2270 4040 1.410882 CAGAAAAGCCCCCGACAAAAA 59.589 47.619 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 175 1.285950 CTCTTCACGTCGCTCACCA 59.714 57.895 0.00 0.00 0.00 4.17
434 1090 2.665008 TACCATGCATGCGGAGGAGC 62.665 60.000 21.69 0.00 37.71 4.70
435 1091 0.602106 CTACCATGCATGCGGAGGAG 60.602 60.000 21.69 9.73 0.00 3.69
436 1092 1.337384 ACTACCATGCATGCGGAGGA 61.337 55.000 21.69 3.19 0.00 3.71
437 1093 0.464373 AACTACCATGCATGCGGAGG 60.464 55.000 21.69 17.75 0.00 4.30
438 1094 2.238942 TAACTACCATGCATGCGGAG 57.761 50.000 21.69 20.65 0.00 4.63
439 1095 2.928801 ATAACTACCATGCATGCGGA 57.071 45.000 21.69 10.30 0.00 5.54
440 1096 3.988379 AAATAACTACCATGCATGCGG 57.012 42.857 21.69 11.41 0.00 5.69
441 1097 4.739716 GGAAAAATAACTACCATGCATGCG 59.260 41.667 21.69 16.19 0.00 4.73
442 1098 4.739716 CGGAAAAATAACTACCATGCATGC 59.260 41.667 21.69 11.82 0.00 4.06
443 1099 4.739716 GCGGAAAAATAACTACCATGCATG 59.260 41.667 20.19 20.19 0.00 4.06
444 1100 4.497340 CGCGGAAAAATAACTACCATGCAT 60.497 41.667 0.00 0.00 0.00 3.96
445 1101 3.181505 CGCGGAAAAATAACTACCATGCA 60.182 43.478 0.00 0.00 0.00 3.96
446 1102 3.181504 ACGCGGAAAAATAACTACCATGC 60.182 43.478 12.47 0.00 0.00 4.06
447 1103 4.339429 CACGCGGAAAAATAACTACCATG 58.661 43.478 12.47 0.00 0.00 3.66
448 1104 3.375922 CCACGCGGAAAAATAACTACCAT 59.624 43.478 12.47 0.00 0.00 3.55
449 1105 2.743126 CCACGCGGAAAAATAACTACCA 59.257 45.455 12.47 0.00 0.00 3.25
450 1106 2.743664 ACCACGCGGAAAAATAACTACC 59.256 45.455 12.47 0.00 35.59 3.18
451 1107 5.120674 ACTTACCACGCGGAAAAATAACTAC 59.879 40.000 12.47 0.00 35.59 2.73
452 1108 5.237048 ACTTACCACGCGGAAAAATAACTA 58.763 37.500 12.47 0.00 35.59 2.24
453 1109 4.067192 ACTTACCACGCGGAAAAATAACT 58.933 39.130 12.47 0.00 35.59 2.24
454 1110 4.408993 ACTTACCACGCGGAAAAATAAC 57.591 40.909 12.47 0.00 35.59 1.89
455 1111 5.435820 AAACTTACCACGCGGAAAAATAA 57.564 34.783 12.47 0.00 35.59 1.40
456 1112 4.083377 GGAAACTTACCACGCGGAAAAATA 60.083 41.667 12.47 0.00 35.59 1.40
457 1113 3.304861 GGAAACTTACCACGCGGAAAAAT 60.305 43.478 12.47 0.00 35.59 1.82
458 1114 2.033174 GGAAACTTACCACGCGGAAAAA 59.967 45.455 12.47 0.00 35.59 1.94
459 1115 1.603326 GGAAACTTACCACGCGGAAAA 59.397 47.619 12.47 0.00 35.59 2.29
460 1116 1.228533 GGAAACTTACCACGCGGAAA 58.771 50.000 12.47 0.00 35.59 3.13
461 1117 0.106335 TGGAAACTTACCACGCGGAA 59.894 50.000 12.47 0.00 35.59 4.30
462 1118 0.600782 GTGGAAACTTACCACGCGGA 60.601 55.000 12.47 0.00 46.15 5.54
463 1119 1.864176 GTGGAAACTTACCACGCGG 59.136 57.895 12.47 0.00 46.15 6.46
468 1124 2.156098 GCAATCGGTGGAAACTTACCA 58.844 47.619 0.00 0.00 36.76 3.25
469 1125 2.418976 GAGCAATCGGTGGAAACTTACC 59.581 50.000 0.00 0.00 0.00 2.85
470 1126 2.418976 GGAGCAATCGGTGGAAACTTAC 59.581 50.000 0.00 0.00 0.00 2.34
471 1127 2.304761 AGGAGCAATCGGTGGAAACTTA 59.695 45.455 0.00 0.00 0.00 2.24
472 1128 1.073923 AGGAGCAATCGGTGGAAACTT 59.926 47.619 0.00 0.00 0.00 2.66
473 1129 0.693049 AGGAGCAATCGGTGGAAACT 59.307 50.000 0.00 0.00 0.00 2.66
474 1130 1.087501 GAGGAGCAATCGGTGGAAAC 58.912 55.000 0.00 0.00 0.00 2.78
475 1131 0.035439 GGAGGAGCAATCGGTGGAAA 60.035 55.000 0.00 0.00 0.00 3.13
476 1132 1.602237 GGAGGAGCAATCGGTGGAA 59.398 57.895 0.00 0.00 0.00 3.53
477 1133 2.721167 CGGAGGAGCAATCGGTGGA 61.721 63.158 0.00 0.00 0.00 4.02
478 1134 2.202932 CGGAGGAGCAATCGGTGG 60.203 66.667 0.00 0.00 0.00 4.61
479 1135 2.892425 GCGGAGGAGCAATCGGTG 60.892 66.667 0.00 0.00 37.05 4.94
480 1136 3.390521 TGCGGAGGAGCAATCGGT 61.391 61.111 0.00 0.00 45.06 4.69
595 1925 2.809601 CTGCCGAGAACGTTCCCG 60.810 66.667 23.36 23.36 37.88 5.14
800 2533 4.221924 GCCTAGGAACTCTTGAGACTCTTT 59.778 45.833 14.75 0.00 41.75 2.52
902 2636 1.185618 TGAAGGACTGGGACGACCTG 61.186 60.000 3.44 5.16 43.37 4.00
986 2721 1.812093 GCCATGGCGCGTGTACTTA 60.812 57.895 23.48 0.00 0.00 2.24
1065 2808 2.327343 GCAGACGCTTGCCATGTCA 61.327 57.895 0.51 0.00 38.13 3.58
1133 2876 4.760047 CCTTCGCCGGTGGTGGAG 62.760 72.222 16.49 8.24 38.49 3.86
1151 2894 2.583593 CCTGCTCGGCGAAGTAGC 60.584 66.667 12.13 11.70 36.77 3.58
1182 2925 2.803479 GCTGTATGCTGCCTTGCC 59.197 61.111 1.07 0.00 38.95 4.52
1197 2940 2.165301 GCGCCGATAAACACGAGCT 61.165 57.895 0.00 0.00 33.98 4.09
1275 3018 0.039472 AGAGAGTCTCAGCTGGAGCA 59.961 55.000 22.05 0.00 43.70 4.26
1276 3019 1.134946 GAAGAGAGTCTCAGCTGGAGC 59.865 57.143 22.05 4.04 43.70 4.70
1277 3020 2.726821 AGAAGAGAGTCTCAGCTGGAG 58.273 52.381 22.05 10.18 45.49 3.86
1278 3021 2.897271 AGAAGAGAGTCTCAGCTGGA 57.103 50.000 22.05 7.36 32.06 3.86
1358 3115 5.297029 GGCCCTAAGTGTTCTATTTCACATC 59.703 44.000 0.00 0.00 37.07 3.06
1376 3139 1.122632 TGTCAACCGAACAGGCCCTA 61.123 55.000 0.00 0.00 46.52 3.53
1377 3140 1.990160 TTGTCAACCGAACAGGCCCT 61.990 55.000 0.00 0.00 46.52 5.19
1378 3141 1.515521 CTTGTCAACCGAACAGGCCC 61.516 60.000 0.00 0.00 46.52 5.80
1379 3142 1.515521 CCTTGTCAACCGAACAGGCC 61.516 60.000 0.00 0.00 46.52 5.19
1380 3143 0.534203 TCCTTGTCAACCGAACAGGC 60.534 55.000 0.00 0.00 46.52 4.85
1382 3145 4.290155 CATTTTCCTTGTCAACCGAACAG 58.710 43.478 0.00 0.00 0.00 3.16
1383 3146 3.067461 CCATTTTCCTTGTCAACCGAACA 59.933 43.478 0.00 0.00 0.00 3.18
1384 3147 3.067601 ACCATTTTCCTTGTCAACCGAAC 59.932 43.478 0.00 0.00 0.00 3.95
1385 3148 3.292460 ACCATTTTCCTTGTCAACCGAA 58.708 40.909 0.00 0.00 0.00 4.30
1386 3149 2.938838 ACCATTTTCCTTGTCAACCGA 58.061 42.857 0.00 0.00 0.00 4.69
1387 3150 3.190535 CCTACCATTTTCCTTGTCAACCG 59.809 47.826 0.00 0.00 0.00 4.44
1388 3151 3.509967 CCCTACCATTTTCCTTGTCAACC 59.490 47.826 0.00 0.00 0.00 3.77
1389 3152 4.149598 ACCCTACCATTTTCCTTGTCAAC 58.850 43.478 0.00 0.00 0.00 3.18
1390 3153 4.463050 ACCCTACCATTTTCCTTGTCAA 57.537 40.909 0.00 0.00 0.00 3.18
1391 3154 4.463050 AACCCTACCATTTTCCTTGTCA 57.537 40.909 0.00 0.00 0.00 3.58
1392 3155 4.021456 CCAAACCCTACCATTTTCCTTGTC 60.021 45.833 0.00 0.00 0.00 3.18
1393 3156 3.901222 CCAAACCCTACCATTTTCCTTGT 59.099 43.478 0.00 0.00 0.00 3.16
1394 3157 3.306710 GCCAAACCCTACCATTTTCCTTG 60.307 47.826 0.00 0.00 0.00 3.61
1395 3158 2.903784 GCCAAACCCTACCATTTTCCTT 59.096 45.455 0.00 0.00 0.00 3.36
1396 3159 2.158234 TGCCAAACCCTACCATTTTCCT 60.158 45.455 0.00 0.00 0.00 3.36
1397 3160 2.233676 CTGCCAAACCCTACCATTTTCC 59.766 50.000 0.00 0.00 0.00 3.13
1398 3161 2.233676 CCTGCCAAACCCTACCATTTTC 59.766 50.000 0.00 0.00 0.00 2.29
1399 3162 2.256306 CCTGCCAAACCCTACCATTTT 58.744 47.619 0.00 0.00 0.00 1.82
1400 3163 1.552254 CCCTGCCAAACCCTACCATTT 60.552 52.381 0.00 0.00 0.00 2.32
1401 3164 0.041090 CCCTGCCAAACCCTACCATT 59.959 55.000 0.00 0.00 0.00 3.16
1402 3165 0.849094 TCCCTGCCAAACCCTACCAT 60.849 55.000 0.00 0.00 0.00 3.55
1403 3166 0.849094 ATCCCTGCCAAACCCTACCA 60.849 55.000 0.00 0.00 0.00 3.25
1404 3167 0.335019 AATCCCTGCCAAACCCTACC 59.665 55.000 0.00 0.00 0.00 3.18
1405 3168 1.474330 CAATCCCTGCCAAACCCTAC 58.526 55.000 0.00 0.00 0.00 3.18
1406 3169 0.334676 CCAATCCCTGCCAAACCCTA 59.665 55.000 0.00 0.00 0.00 3.53
1407 3170 1.079073 CCAATCCCTGCCAAACCCT 59.921 57.895 0.00 0.00 0.00 4.34
1408 3171 2.659063 GCCAATCCCTGCCAAACCC 61.659 63.158 0.00 0.00 0.00 4.11
1409 3172 1.891722 CTGCCAATCCCTGCCAAACC 61.892 60.000 0.00 0.00 0.00 3.27
1410 3173 1.593265 CTGCCAATCCCTGCCAAAC 59.407 57.895 0.00 0.00 0.00 2.93
1411 3174 1.610086 CCTGCCAATCCCTGCCAAA 60.610 57.895 0.00 0.00 0.00 3.28
1412 3175 2.037687 CCTGCCAATCCCTGCCAA 59.962 61.111 0.00 0.00 0.00 4.52
1413 3176 4.064768 CCCTGCCAATCCCTGCCA 62.065 66.667 0.00 0.00 0.00 4.92
1414 3177 2.594365 AATCCCTGCCAATCCCTGCC 62.594 60.000 0.00 0.00 0.00 4.85
1415 3178 1.075748 AATCCCTGCCAATCCCTGC 60.076 57.895 0.00 0.00 0.00 4.85
1416 3179 0.468771 GGAATCCCTGCCAATCCCTG 60.469 60.000 0.00 0.00 0.00 4.45
1417 3180 0.925720 TGGAATCCCTGCCAATCCCT 60.926 55.000 0.00 0.00 0.00 4.20
1418 3181 0.756815 GTGGAATCCCTGCCAATCCC 60.757 60.000 0.00 0.00 35.63 3.85
1419 3182 0.756815 GGTGGAATCCCTGCCAATCC 60.757 60.000 0.00 0.00 35.63 3.01
1420 3183 0.756815 GGGTGGAATCCCTGCCAATC 60.757 60.000 0.00 0.00 43.85 2.67
1421 3184 1.311059 GGGTGGAATCCCTGCCAAT 59.689 57.895 0.00 0.00 43.85 3.16
1422 3185 2.770130 GGGTGGAATCCCTGCCAA 59.230 61.111 0.00 0.00 43.85 4.52
1429 3192 2.777692 TGACTTATGGAGGGTGGAATCC 59.222 50.000 0.00 0.00 36.05 3.01
1430 3193 4.503714 TTGACTTATGGAGGGTGGAATC 57.496 45.455 0.00 0.00 0.00 2.52
1431 3194 4.946160 TTTGACTTATGGAGGGTGGAAT 57.054 40.909 0.00 0.00 0.00 3.01
1432 3195 4.403734 GTTTTGACTTATGGAGGGTGGAA 58.596 43.478 0.00 0.00 0.00 3.53
1433 3196 3.245122 GGTTTTGACTTATGGAGGGTGGA 60.245 47.826 0.00 0.00 0.00 4.02
1434 3197 3.089284 GGTTTTGACTTATGGAGGGTGG 58.911 50.000 0.00 0.00 0.00 4.61
1435 3198 4.010349 GAGGTTTTGACTTATGGAGGGTG 58.990 47.826 0.00 0.00 0.00 4.61
1436 3199 3.916989 AGAGGTTTTGACTTATGGAGGGT 59.083 43.478 0.00 0.00 0.00 4.34
1437 3200 4.576330 AGAGGTTTTGACTTATGGAGGG 57.424 45.455 0.00 0.00 0.00 4.30
1438 3201 4.944317 GGAAGAGGTTTTGACTTATGGAGG 59.056 45.833 0.00 0.00 0.00 4.30
1439 3202 5.560724 TGGAAGAGGTTTTGACTTATGGAG 58.439 41.667 0.00 0.00 0.00 3.86
1440 3203 5.576563 TGGAAGAGGTTTTGACTTATGGA 57.423 39.130 0.00 0.00 0.00 3.41
1441 3204 6.127619 GGATTGGAAGAGGTTTTGACTTATGG 60.128 42.308 0.00 0.00 0.00 2.74
1442 3205 6.434028 TGGATTGGAAGAGGTTTTGACTTATG 59.566 38.462 0.00 0.00 0.00 1.90
1443 3206 6.552008 TGGATTGGAAGAGGTTTTGACTTAT 58.448 36.000 0.00 0.00 0.00 1.73
1444 3207 5.947663 TGGATTGGAAGAGGTTTTGACTTA 58.052 37.500 0.00 0.00 0.00 2.24
1445 3208 4.803452 TGGATTGGAAGAGGTTTTGACTT 58.197 39.130 0.00 0.00 0.00 3.01
1446 3209 4.453480 TGGATTGGAAGAGGTTTTGACT 57.547 40.909 0.00 0.00 0.00 3.41
1447 3210 4.158579 GGATGGATTGGAAGAGGTTTTGAC 59.841 45.833 0.00 0.00 0.00 3.18
1448 3211 4.344104 GGATGGATTGGAAGAGGTTTTGA 58.656 43.478 0.00 0.00 0.00 2.69
1449 3212 3.448660 GGGATGGATTGGAAGAGGTTTTG 59.551 47.826 0.00 0.00 0.00 2.44
1450 3213 3.077391 TGGGATGGATTGGAAGAGGTTTT 59.923 43.478 0.00 0.00 0.00 2.43
1451 3214 2.654385 TGGGATGGATTGGAAGAGGTTT 59.346 45.455 0.00 0.00 0.00 3.27
1452 3215 2.287584 TGGGATGGATTGGAAGAGGTT 58.712 47.619 0.00 0.00 0.00 3.50
1453 3216 1.985622 TGGGATGGATTGGAAGAGGT 58.014 50.000 0.00 0.00 0.00 3.85
1454 3217 3.494332 GATTGGGATGGATTGGAAGAGG 58.506 50.000 0.00 0.00 0.00 3.69
1455 3218 3.494332 GGATTGGGATGGATTGGAAGAG 58.506 50.000 0.00 0.00 0.00 2.85
1456 3219 2.177669 GGGATTGGGATGGATTGGAAGA 59.822 50.000 0.00 0.00 0.00 2.87
1457 3220 2.601905 GGGATTGGGATGGATTGGAAG 58.398 52.381 0.00 0.00 0.00 3.46
1458 3221 1.220236 GGGGATTGGGATGGATTGGAA 59.780 52.381 0.00 0.00 0.00 3.53
1459 3222 0.859760 GGGGATTGGGATGGATTGGA 59.140 55.000 0.00 0.00 0.00 3.53
1460 3223 0.178924 GGGGGATTGGGATGGATTGG 60.179 60.000 0.00 0.00 0.00 3.16
1461 3224 0.862554 AGGGGGATTGGGATGGATTG 59.137 55.000 0.00 0.00 0.00 2.67
1462 3225 0.862554 CAGGGGGATTGGGATGGATT 59.137 55.000 0.00 0.00 0.00 3.01
1463 3226 0.329831 ACAGGGGGATTGGGATGGAT 60.330 55.000 0.00 0.00 0.00 3.41
1464 3227 1.086565 ACAGGGGGATTGGGATGGA 59.913 57.895 0.00 0.00 0.00 3.41
1465 3228 1.231068 CACAGGGGGATTGGGATGG 59.769 63.158 0.00 0.00 0.00 3.51
1466 3229 0.184451 CTCACAGGGGGATTGGGATG 59.816 60.000 0.00 0.00 0.00 3.51
1467 3230 0.995675 CCTCACAGGGGGATTGGGAT 60.996 60.000 0.00 0.00 0.00 3.85
1468 3231 1.619363 CCTCACAGGGGGATTGGGA 60.619 63.158 0.00 0.00 0.00 4.37
1469 3232 1.619363 TCCTCACAGGGGGATTGGG 60.619 63.158 0.00 0.00 35.59 4.12
1470 3233 1.918253 CTCCTCACAGGGGGATTGG 59.082 63.158 0.00 0.00 35.59 3.16
1476 3239 0.613777 GTTACACCTCCTCACAGGGG 59.386 60.000 0.00 0.00 43.56 4.79
1477 3240 0.613777 GGTTACACCTCCTCACAGGG 59.386 60.000 0.00 0.00 37.96 4.45
1478 3241 0.246635 CGGTTACACCTCCTCACAGG 59.753 60.000 0.00 0.00 35.66 4.00
1479 3242 1.254026 TCGGTTACACCTCCTCACAG 58.746 55.000 0.00 0.00 35.66 3.66
1480 3243 1.342174 GTTCGGTTACACCTCCTCACA 59.658 52.381 0.00 0.00 35.66 3.58
1481 3244 1.342174 TGTTCGGTTACACCTCCTCAC 59.658 52.381 0.00 0.00 35.66 3.51
1482 3245 1.707106 TGTTCGGTTACACCTCCTCA 58.293 50.000 0.00 0.00 35.66 3.86
1483 3246 2.825861 TTGTTCGGTTACACCTCCTC 57.174 50.000 0.00 0.00 35.66 3.71
1484 3247 2.809299 GCTTTGTTCGGTTACACCTCCT 60.809 50.000 0.00 0.00 35.66 3.69
1485 3248 1.534163 GCTTTGTTCGGTTACACCTCC 59.466 52.381 0.00 0.00 35.66 4.30
1486 3249 1.534163 GGCTTTGTTCGGTTACACCTC 59.466 52.381 0.00 0.00 35.66 3.85
1487 3250 1.142262 AGGCTTTGTTCGGTTACACCT 59.858 47.619 0.00 0.00 35.66 4.00
1488 3251 1.601166 AGGCTTTGTTCGGTTACACC 58.399 50.000 0.00 0.00 34.05 4.16
1489 3252 3.187842 CCTAAGGCTTTGTTCGGTTACAC 59.812 47.826 4.45 0.00 0.00 2.90
1490 3253 3.404899 CCTAAGGCTTTGTTCGGTTACA 58.595 45.455 4.45 0.00 0.00 2.41
1491 3254 2.745821 CCCTAAGGCTTTGTTCGGTTAC 59.254 50.000 4.45 0.00 0.00 2.50
1492 3255 2.290450 CCCCTAAGGCTTTGTTCGGTTA 60.290 50.000 4.45 0.00 0.00 2.85
1493 3256 1.546998 CCCCTAAGGCTTTGTTCGGTT 60.547 52.381 4.45 0.00 0.00 4.44
1494 3257 0.037734 CCCCTAAGGCTTTGTTCGGT 59.962 55.000 4.45 0.00 0.00 4.69
1495 3258 0.037734 ACCCCTAAGGCTTTGTTCGG 59.962 55.000 4.45 5.18 40.58 4.30
1496 3259 2.773993 TACCCCTAAGGCTTTGTTCG 57.226 50.000 4.45 0.00 40.58 3.95
1497 3260 5.625568 TCTATACCCCTAAGGCTTTGTTC 57.374 43.478 4.45 0.00 40.58 3.18
1498 3261 5.491439 ACTTCTATACCCCTAAGGCTTTGTT 59.509 40.000 4.45 0.00 40.58 2.83
1499 3262 5.037598 ACTTCTATACCCCTAAGGCTTTGT 58.962 41.667 4.45 0.84 40.58 2.83
1500 3263 5.632034 ACTTCTATACCCCTAAGGCTTTG 57.368 43.478 4.45 2.74 40.58 2.77
1501 3264 6.450834 AGTACTTCTATACCCCTAAGGCTTT 58.549 40.000 4.45 0.00 40.58 3.51
1502 3265 6.040662 AGTACTTCTATACCCCTAAGGCTT 57.959 41.667 4.58 4.58 40.58 4.35
1503 3266 5.376257 AGAGTACTTCTATACCCCTAAGGCT 59.624 44.000 0.00 0.00 34.41 4.58
1504 3267 5.477637 CAGAGTACTTCTATACCCCTAAGGC 59.522 48.000 0.00 0.00 34.71 4.35
1505 3268 6.612741 ACAGAGTACTTCTATACCCCTAAGG 58.387 44.000 0.00 0.00 36.64 2.69
1506 3269 7.446013 CAGACAGAGTACTTCTATACCCCTAAG 59.554 44.444 0.00 0.00 33.83 2.18
1507 3270 7.092083 ACAGACAGAGTACTTCTATACCCCTAA 60.092 40.741 0.00 0.00 33.83 2.69
1528 3291 7.611213 ACTGCCAAATACAAGTATTACAGAC 57.389 36.000 23.19 9.25 36.13 3.51
1534 3297 9.691362 CTTGTTTAACTGCCAAATACAAGTATT 57.309 29.630 0.00 0.00 37.36 1.89
1537 3300 7.107639 ACTTGTTTAACTGCCAAATACAAGT 57.892 32.000 10.84 10.84 45.36 3.16
1538 3301 9.522804 TTTACTTGTTTAACTGCCAAATACAAG 57.477 29.630 0.00 0.00 43.88 3.16
1539 3302 9.871238 TTTTACTTGTTTAACTGCCAAATACAA 57.129 25.926 0.00 0.00 0.00 2.41
1574 3337 0.470268 GGAGAGTCGGAGGCCCTATT 60.470 60.000 0.00 0.00 0.00 1.73
1603 3366 5.153513 CACATTTCAGTACATTTTCCACCG 58.846 41.667 0.00 0.00 0.00 4.94
1608 3371 7.462109 TTTGCACACATTTCAGTACATTTTC 57.538 32.000 0.00 0.00 0.00 2.29
1626 3389 3.364621 CGCTCCAATAAACACATTTGCAC 59.635 43.478 0.00 0.00 0.00 4.57
1702 3472 6.252967 AGTCTGATCATATTCTACTCTGCG 57.747 41.667 0.00 0.00 0.00 5.18
1799 3569 4.523943 TGGGATCCACAATTTTGAAGTCTG 59.476 41.667 15.23 0.00 0.00 3.51
1800 3570 4.739793 TGGGATCCACAATTTTGAAGTCT 58.260 39.130 15.23 0.00 0.00 3.24
1881 3651 9.632638 ACCTAACTGAATAAACAATCATATGCT 57.367 29.630 0.00 0.00 0.00 3.79
1933 3703 2.774044 GCAGAGGCAAGAGGTAAGC 58.226 57.895 0.00 0.00 40.72 3.09
1951 3721 6.114221 TATGTATGCATGCATCGATTGATG 57.886 37.500 35.35 17.44 43.76 3.07
1952 3722 6.937436 ATATGTATGCATGCATCGATTGAT 57.063 33.333 35.35 18.85 37.82 2.57
1953 3723 6.746745 AATATGTATGCATGCATCGATTGA 57.253 33.333 35.35 15.39 37.82 2.57
1981 3751 9.811995 GTGGAACTTAAGACCTTGTTTTAATTT 57.188 29.630 10.09 0.00 0.00 1.82
1982 3752 8.132995 CGTGGAACTTAAGACCTTGTTTTAATT 58.867 33.333 10.09 0.00 31.75 1.40
1983 3753 7.255346 CCGTGGAACTTAAGACCTTGTTTTAAT 60.255 37.037 10.09 0.00 31.75 1.40
1984 3754 6.038492 CCGTGGAACTTAAGACCTTGTTTTAA 59.962 38.462 10.09 0.00 31.75 1.52
1985 3755 5.528320 CCGTGGAACTTAAGACCTTGTTTTA 59.472 40.000 10.09 0.00 31.75 1.52
1986 3756 4.337274 CCGTGGAACTTAAGACCTTGTTTT 59.663 41.667 10.09 0.00 31.75 2.43
1987 3757 3.881089 CCGTGGAACTTAAGACCTTGTTT 59.119 43.478 10.09 0.00 31.75 2.83
1988 3758 3.135167 TCCGTGGAACTTAAGACCTTGTT 59.865 43.478 10.09 0.00 31.75 2.83
1989 3759 2.701951 TCCGTGGAACTTAAGACCTTGT 59.298 45.455 10.09 0.00 31.75 3.16
1990 3760 3.006537 TCTCCGTGGAACTTAAGACCTTG 59.993 47.826 10.09 8.48 31.75 3.61
1991 3761 3.006644 GTCTCCGTGGAACTTAAGACCTT 59.993 47.826 10.09 0.00 33.76 3.50
1992 3762 2.561858 GTCTCCGTGGAACTTAAGACCT 59.438 50.000 10.09 0.00 33.76 3.85
1993 3763 2.561858 AGTCTCCGTGGAACTTAAGACC 59.438 50.000 10.09 12.30 37.74 3.85
1994 3764 3.255149 TGAGTCTCCGTGGAACTTAAGAC 59.745 47.826 10.09 2.77 37.47 3.01
1995 3765 3.493334 TGAGTCTCCGTGGAACTTAAGA 58.507 45.455 10.09 0.00 31.75 2.10
1996 3766 3.936372 TGAGTCTCCGTGGAACTTAAG 57.064 47.619 0.00 0.00 31.75 1.85
1997 3767 4.100498 ACTTTGAGTCTCCGTGGAACTTAA 59.900 41.667 0.00 5.35 31.75 1.85
1998 3768 3.640029 ACTTTGAGTCTCCGTGGAACTTA 59.360 43.478 0.00 0.62 31.75 2.24
1999 3769 2.434702 ACTTTGAGTCTCCGTGGAACTT 59.565 45.455 0.00 0.00 31.75 2.66
2000 3770 2.040178 ACTTTGAGTCTCCGTGGAACT 58.960 47.619 0.00 4.19 31.75 3.01
2001 3771 2.135933 CACTTTGAGTCTCCGTGGAAC 58.864 52.381 0.00 0.00 0.00 3.62
2002 3772 2.035961 CTCACTTTGAGTCTCCGTGGAA 59.964 50.000 11.71 0.00 39.58 3.53
2003 3773 1.613925 CTCACTTTGAGTCTCCGTGGA 59.386 52.381 11.71 0.00 39.58 4.02
2004 3774 2.071688 CTCACTTTGAGTCTCCGTGG 57.928 55.000 11.71 3.06 39.58 4.94
2014 3784 5.408299 CACCGATGTAATTGACTCACTTTGA 59.592 40.000 0.00 0.00 0.00 2.69
2015 3785 5.390885 CCACCGATGTAATTGACTCACTTTG 60.391 44.000 0.00 0.00 0.00 2.77
2016 3786 4.695455 CCACCGATGTAATTGACTCACTTT 59.305 41.667 0.00 0.00 0.00 2.66
2017 3787 4.253685 CCACCGATGTAATTGACTCACTT 58.746 43.478 0.00 0.00 0.00 3.16
2018 3788 3.260884 ACCACCGATGTAATTGACTCACT 59.739 43.478 0.00 0.00 0.00 3.41
2019 3789 3.370978 CACCACCGATGTAATTGACTCAC 59.629 47.826 0.00 0.00 0.00 3.51
2020 3790 3.595173 CACCACCGATGTAATTGACTCA 58.405 45.455 0.00 0.00 0.00 3.41
2021 3791 2.351726 GCACCACCGATGTAATTGACTC 59.648 50.000 0.00 0.00 0.00 3.36
2022 3792 2.027192 AGCACCACCGATGTAATTGACT 60.027 45.455 0.00 0.00 0.00 3.41
2023 3793 2.356135 AGCACCACCGATGTAATTGAC 58.644 47.619 0.00 0.00 0.00 3.18
2024 3794 2.779755 AGCACCACCGATGTAATTGA 57.220 45.000 0.00 0.00 0.00 2.57
2025 3795 3.792401 TCTAGCACCACCGATGTAATTG 58.208 45.455 0.00 0.00 0.00 2.32
2026 3796 4.081087 AGTTCTAGCACCACCGATGTAATT 60.081 41.667 0.00 0.00 0.00 1.40
2027 3797 3.451178 AGTTCTAGCACCACCGATGTAAT 59.549 43.478 0.00 0.00 0.00 1.89
2028 3798 2.829720 AGTTCTAGCACCACCGATGTAA 59.170 45.455 0.00 0.00 0.00 2.41
2029 3799 2.453521 AGTTCTAGCACCACCGATGTA 58.546 47.619 0.00 0.00 0.00 2.29
2030 3800 1.267121 AGTTCTAGCACCACCGATGT 58.733 50.000 0.00 0.00 0.00 3.06
2031 3801 2.002586 CAAGTTCTAGCACCACCGATG 58.997 52.381 0.00 0.00 0.00 3.84
2032 3802 1.066143 CCAAGTTCTAGCACCACCGAT 60.066 52.381 0.00 0.00 0.00 4.18
2033 3803 0.320374 CCAAGTTCTAGCACCACCGA 59.680 55.000 0.00 0.00 0.00 4.69
2034 3804 1.298859 GCCAAGTTCTAGCACCACCG 61.299 60.000 0.00 0.00 0.00 4.94
2035 3805 0.250727 TGCCAAGTTCTAGCACCACC 60.251 55.000 0.00 0.00 0.00 4.61
2036 3806 1.826385 ATGCCAAGTTCTAGCACCAC 58.174 50.000 0.00 0.00 39.77 4.16
2037 3807 3.712016 TTATGCCAAGTTCTAGCACCA 57.288 42.857 0.00 0.00 39.77 4.17
2038 3808 3.181510 CGTTTATGCCAAGTTCTAGCACC 60.182 47.826 0.00 0.00 39.77 5.01
2039 3809 3.682858 TCGTTTATGCCAAGTTCTAGCAC 59.317 43.478 0.00 0.00 39.77 4.40
2040 3810 3.932822 TCGTTTATGCCAAGTTCTAGCA 58.067 40.909 0.00 0.00 41.50 3.49
2041 3811 4.024809 GGATCGTTTATGCCAAGTTCTAGC 60.025 45.833 0.00 0.00 0.00 3.42
2042 3812 4.511826 GGGATCGTTTATGCCAAGTTCTAG 59.488 45.833 0.00 0.00 45.26 2.43
2043 3813 4.448210 GGGATCGTTTATGCCAAGTTCTA 58.552 43.478 0.00 0.00 45.26 2.10
2044 3814 3.279434 GGGATCGTTTATGCCAAGTTCT 58.721 45.455 0.00 0.00 45.26 3.01
2045 3815 3.692791 GGGATCGTTTATGCCAAGTTC 57.307 47.619 0.00 0.00 45.26 3.01
2051 3821 2.223377 CGCTAAAGGGATCGTTTATGCC 59.777 50.000 0.70 0.00 46.27 4.40
2052 3822 2.349532 GCGCTAAAGGGATCGTTTATGC 60.350 50.000 0.00 4.52 0.00 3.14
2053 3823 3.131396 AGCGCTAAAGGGATCGTTTATG 58.869 45.455 8.99 0.00 0.00 1.90
2054 3824 3.470645 AGCGCTAAAGGGATCGTTTAT 57.529 42.857 8.99 0.00 0.00 1.40
2055 3825 2.973694 AGCGCTAAAGGGATCGTTTA 57.026 45.000 8.99 0.00 0.00 2.01
2056 3826 2.429610 TCTAGCGCTAAAGGGATCGTTT 59.570 45.455 19.37 0.00 0.00 3.60
2057 3827 2.029623 TCTAGCGCTAAAGGGATCGTT 58.970 47.619 19.37 0.00 0.00 3.85
2058 3828 1.688772 TCTAGCGCTAAAGGGATCGT 58.311 50.000 19.37 0.00 0.00 3.73
2059 3829 2.034812 AGTTCTAGCGCTAAAGGGATCG 59.965 50.000 19.37 4.10 0.00 3.69
2060 3830 3.737032 AGTTCTAGCGCTAAAGGGATC 57.263 47.619 19.37 10.85 0.00 3.36
2061 3831 3.197983 ACAAGTTCTAGCGCTAAAGGGAT 59.802 43.478 19.37 0.56 0.00 3.85
2062 3832 2.565834 ACAAGTTCTAGCGCTAAAGGGA 59.434 45.455 19.37 9.32 0.00 4.20
2063 3833 2.673368 CACAAGTTCTAGCGCTAAAGGG 59.327 50.000 19.37 6.84 0.00 3.95
2064 3834 2.673368 CCACAAGTTCTAGCGCTAAAGG 59.327 50.000 19.37 7.23 0.00 3.11
2065 3835 3.123621 CACCACAAGTTCTAGCGCTAAAG 59.876 47.826 19.37 9.93 0.00 1.85
2066 3836 3.064207 CACCACAAGTTCTAGCGCTAAA 58.936 45.455 19.37 12.52 0.00 1.85
2067 3837 2.036733 ACACCACAAGTTCTAGCGCTAA 59.963 45.455 19.37 3.08 0.00 3.09
2068 3838 1.616865 ACACCACAAGTTCTAGCGCTA 59.383 47.619 17.75 17.75 0.00 4.26
2069 3839 0.393077 ACACCACAAGTTCTAGCGCT 59.607 50.000 17.26 17.26 0.00 5.92
2070 3840 1.725164 GTACACCACAAGTTCTAGCGC 59.275 52.381 0.00 0.00 0.00 5.92
2071 3841 3.021269 TGTACACCACAAGTTCTAGCG 57.979 47.619 0.00 0.00 32.95 4.26
2072 3842 3.612860 CGATGTACACCACAAGTTCTAGC 59.387 47.826 0.00 0.00 41.55 3.42
2073 3843 5.055642 TCGATGTACACCACAAGTTCTAG 57.944 43.478 0.00 0.00 41.55 2.43
2074 3844 5.010314 ACTTCGATGTACACCACAAGTTCTA 59.990 40.000 0.00 0.00 41.55 2.10
2075 3845 4.202223 ACTTCGATGTACACCACAAGTTCT 60.202 41.667 0.00 0.00 41.55 3.01
2076 3846 4.056050 ACTTCGATGTACACCACAAGTTC 58.944 43.478 0.00 0.00 41.55 3.01
2077 3847 3.807622 CACTTCGATGTACACCACAAGTT 59.192 43.478 0.00 0.00 41.55 2.66
2078 3848 3.390135 CACTTCGATGTACACCACAAGT 58.610 45.455 0.00 1.60 41.55 3.16
2079 3849 2.736721 CCACTTCGATGTACACCACAAG 59.263 50.000 0.00 0.94 41.55 3.16
2080 3850 2.103432 ACCACTTCGATGTACACCACAA 59.897 45.455 0.00 0.00 41.55 3.33
2081 3851 1.689813 ACCACTTCGATGTACACCACA 59.310 47.619 0.00 0.00 42.69 4.17
2082 3852 2.066262 CACCACTTCGATGTACACCAC 58.934 52.381 0.00 0.00 0.00 4.16
2083 3853 1.606994 GCACCACTTCGATGTACACCA 60.607 52.381 0.00 0.00 0.00 4.17
2084 3854 1.076332 GCACCACTTCGATGTACACC 58.924 55.000 0.00 0.00 0.00 4.16
2085 3855 1.790755 TGCACCACTTCGATGTACAC 58.209 50.000 0.00 0.00 0.00 2.90
2086 3856 2.535012 TTGCACCACTTCGATGTACA 57.465 45.000 3.33 0.00 0.00 2.90
2087 3857 3.889196 TTTTGCACCACTTCGATGTAC 57.111 42.857 3.33 0.00 0.00 2.90
2088 3858 3.880490 AGTTTTTGCACCACTTCGATGTA 59.120 39.130 3.33 0.00 0.00 2.29
2089 3859 2.687935 AGTTTTTGCACCACTTCGATGT 59.312 40.909 0.00 0.00 0.00 3.06
2090 3860 3.300009 GAGTTTTTGCACCACTTCGATG 58.700 45.455 0.00 0.00 0.00 3.84
2091 3861 2.032030 CGAGTTTTTGCACCACTTCGAT 60.032 45.455 3.75 0.00 0.00 3.59
2092 3862 1.329292 CGAGTTTTTGCACCACTTCGA 59.671 47.619 3.75 0.00 0.00 3.71
2093 3863 1.596954 CCGAGTTTTTGCACCACTTCG 60.597 52.381 0.00 0.00 0.00 3.79
2094 3864 1.864029 GCCGAGTTTTTGCACCACTTC 60.864 52.381 0.00 0.00 0.00 3.01
2095 3865 0.102300 GCCGAGTTTTTGCACCACTT 59.898 50.000 0.00 0.00 0.00 3.16
2096 3866 0.751643 AGCCGAGTTTTTGCACCACT 60.752 50.000 0.00 0.00 0.00 4.00
2097 3867 0.317854 GAGCCGAGTTTTTGCACCAC 60.318 55.000 0.00 0.00 0.00 4.16
2098 3868 1.781025 CGAGCCGAGTTTTTGCACCA 61.781 55.000 0.00 0.00 0.00 4.17
2099 3869 1.082104 CGAGCCGAGTTTTTGCACC 60.082 57.895 0.00 0.00 0.00 5.01
2100 3870 1.938861 TCGAGCCGAGTTTTTGCAC 59.061 52.632 0.00 0.00 0.00 4.57
2101 3871 4.447544 TCGAGCCGAGTTTTTGCA 57.552 50.000 0.00 0.00 0.00 4.08
2110 3880 2.551097 TATTTGCACGCTCGAGCCGA 62.551 55.000 30.66 14.46 37.91 5.54
2111 3881 2.164663 TATTTGCACGCTCGAGCCG 61.165 57.895 30.66 25.72 37.91 5.52
2112 3882 1.348594 GTATTTGCACGCTCGAGCC 59.651 57.895 30.66 17.73 37.91 4.70
2113 3883 1.013323 CGTATTTGCACGCTCGAGC 60.013 57.895 27.64 27.64 34.78 5.03
2114 3884 1.076533 ACCGTATTTGCACGCTCGAG 61.077 55.000 8.45 8.45 40.59 4.04
2115 3885 1.080366 ACCGTATTTGCACGCTCGA 60.080 52.632 0.00 0.00 40.59 4.04
2116 3886 1.058748 CACCGTATTTGCACGCTCG 59.941 57.895 0.00 0.00 40.59 5.03
2117 3887 1.226018 GCACCGTATTTGCACGCTC 60.226 57.895 0.00 0.00 40.59 5.03
2118 3888 0.390603 TAGCACCGTATTTGCACGCT 60.391 50.000 0.00 0.00 42.83 5.07
2119 3889 0.444651 TTAGCACCGTATTTGCACGC 59.555 50.000 0.00 0.00 42.83 5.34
2120 3890 2.596575 CGATTAGCACCGTATTTGCACG 60.597 50.000 0.00 0.00 42.83 5.34
2121 3891 2.350498 ACGATTAGCACCGTATTTGCAC 59.650 45.455 0.00 0.00 42.83 4.57
2122 3892 2.350192 CACGATTAGCACCGTATTTGCA 59.650 45.455 0.00 0.00 42.83 4.08
2123 3893 2.350498 ACACGATTAGCACCGTATTTGC 59.650 45.455 0.00 0.00 40.52 3.68
2124 3894 4.593597 AACACGATTAGCACCGTATTTG 57.406 40.909 0.00 0.00 37.23 2.32
2125 3895 4.453136 ACAAACACGATTAGCACCGTATTT 59.547 37.500 0.00 0.00 36.06 1.40
2126 3896 3.998341 ACAAACACGATTAGCACCGTATT 59.002 39.130 0.00 0.00 37.23 1.89
2127 3897 3.592059 ACAAACACGATTAGCACCGTAT 58.408 40.909 0.00 0.00 37.23 3.06
2128 3898 3.029320 ACAAACACGATTAGCACCGTA 57.971 42.857 0.00 0.00 37.23 4.02
2129 3899 1.873698 ACAAACACGATTAGCACCGT 58.126 45.000 0.00 0.00 39.88 4.83
2130 3900 4.316861 CGTATACAAACACGATTAGCACCG 60.317 45.833 3.32 0.00 40.56 4.94
2131 3901 4.026310 CCGTATACAAACACGATTAGCACC 60.026 45.833 3.32 0.00 40.56 5.01
2132 3902 4.799949 TCCGTATACAAACACGATTAGCAC 59.200 41.667 3.32 0.00 40.56 4.40
2133 3903 4.996344 TCCGTATACAAACACGATTAGCA 58.004 39.130 3.32 0.00 40.56 3.49
2134 3904 5.555818 GCTTCCGTATACAAACACGATTAGC 60.556 44.000 3.32 0.00 40.56 3.09
2135 3905 5.517411 TGCTTCCGTATACAAACACGATTAG 59.483 40.000 3.32 0.00 40.56 1.73
2136 3906 5.289193 GTGCTTCCGTATACAAACACGATTA 59.711 40.000 3.32 0.00 40.56 1.75
2137 3907 4.092383 GTGCTTCCGTATACAAACACGATT 59.908 41.667 3.32 0.00 40.56 3.34
2138 3908 3.615496 GTGCTTCCGTATACAAACACGAT 59.385 43.478 3.32 0.00 40.56 3.73
2139 3909 2.988493 GTGCTTCCGTATACAAACACGA 59.012 45.455 3.32 0.00 40.56 4.35
2140 3910 2.732500 TGTGCTTCCGTATACAAACACG 59.267 45.455 3.32 0.00 37.89 4.49
2141 3911 3.744426 AGTGTGCTTCCGTATACAAACAC 59.256 43.478 3.32 7.45 37.52 3.32
2142 3912 3.743911 CAGTGTGCTTCCGTATACAAACA 59.256 43.478 3.32 0.00 0.00 2.83
2143 3913 3.991773 TCAGTGTGCTTCCGTATACAAAC 59.008 43.478 3.32 0.00 0.00 2.93
2144 3914 3.991773 GTCAGTGTGCTTCCGTATACAAA 59.008 43.478 3.32 0.00 0.00 2.83
2145 3915 3.581755 GTCAGTGTGCTTCCGTATACAA 58.418 45.455 3.32 0.00 0.00 2.41
2146 3916 2.414957 CGTCAGTGTGCTTCCGTATACA 60.415 50.000 3.32 0.00 0.00 2.29
2147 3917 2.159476 TCGTCAGTGTGCTTCCGTATAC 60.159 50.000 0.00 0.00 0.00 1.47
2148 3918 2.086094 TCGTCAGTGTGCTTCCGTATA 58.914 47.619 0.00 0.00 0.00 1.47
2149 3919 0.885879 TCGTCAGTGTGCTTCCGTAT 59.114 50.000 0.00 0.00 0.00 3.06
2150 3920 0.039798 GTCGTCAGTGTGCTTCCGTA 60.040 55.000 0.00 0.00 0.00 4.02
2151 3921 1.299926 GTCGTCAGTGTGCTTCCGT 60.300 57.895 0.00 0.00 0.00 4.69
2152 3922 2.365068 CGTCGTCAGTGTGCTTCCG 61.365 63.158 0.00 0.00 0.00 4.30
2153 3923 2.658707 GCGTCGTCAGTGTGCTTCC 61.659 63.158 0.00 0.00 0.00 3.46
2154 3924 1.284982 ATGCGTCGTCAGTGTGCTTC 61.285 55.000 0.00 0.00 0.00 3.86
2155 3925 1.300931 ATGCGTCGTCAGTGTGCTT 60.301 52.632 0.00 0.00 0.00 3.91
2156 3926 2.023771 CATGCGTCGTCAGTGTGCT 61.024 57.895 0.00 0.00 0.00 4.40
2157 3927 2.471607 CATGCGTCGTCAGTGTGC 59.528 61.111 0.00 0.00 0.00 4.57
2158 3928 2.471607 GCATGCGTCGTCAGTGTG 59.528 61.111 0.00 0.00 0.00 3.82
2159 3929 2.738521 GGCATGCGTCGTCAGTGT 60.739 61.111 12.44 0.00 0.00 3.55
2160 3930 2.316867 TTGGCATGCGTCGTCAGTG 61.317 57.895 12.44 0.00 0.00 3.66
2161 3931 2.030412 TTGGCATGCGTCGTCAGT 59.970 55.556 12.44 0.00 0.00 3.41
2162 3932 2.476051 GTTGGCATGCGTCGTCAG 59.524 61.111 12.44 0.00 0.00 3.51
2163 3933 3.410516 CGTTGGCATGCGTCGTCA 61.411 61.111 12.44 0.00 0.00 4.35
2164 3934 3.411351 ACGTTGGCATGCGTCGTC 61.411 61.111 21.26 5.89 36.54 4.20
2165 3935 3.711842 CACGTTGGCATGCGTCGT 61.712 61.111 21.26 21.26 39.48 4.34
2166 3936 4.444024 CCACGTTGGCATGCGTCG 62.444 66.667 20.23 20.23 39.48 5.12
2185 3955 2.203153 ACTGACAACGTGCCCCAC 60.203 61.111 0.00 0.00 0.00 4.61
2186 3956 2.203139 CACTGACAACGTGCCCCA 60.203 61.111 0.00 0.00 0.00 4.96
2187 3957 2.110213 TCACTGACAACGTGCCCC 59.890 61.111 0.00 0.00 32.54 5.80
2188 3958 1.092921 TTGTCACTGACAACGTGCCC 61.093 55.000 18.83 0.00 45.88 5.36
2189 3959 2.389386 TTGTCACTGACAACGTGCC 58.611 52.632 18.83 0.00 45.88 5.01
2196 3966 6.389830 AAAAGCATTGTATTGTCACTGACA 57.610 33.333 7.84 7.84 41.09 3.58
2242 4012 1.765904 GGGGGCTTTTCTGTGGAAAAA 59.234 47.619 5.61 0.00 46.57 1.94
2243 4013 1.419381 GGGGGCTTTTCTGTGGAAAA 58.581 50.000 4.28 4.28 45.62 2.29
2244 4014 0.825840 CGGGGGCTTTTCTGTGGAAA 60.826 55.000 0.00 0.00 39.38 3.13
2245 4015 1.228429 CGGGGGCTTTTCTGTGGAA 60.228 57.895 0.00 0.00 0.00 3.53
2246 4016 2.150719 TCGGGGGCTTTTCTGTGGA 61.151 57.895 0.00 0.00 0.00 4.02
2247 4017 1.971695 GTCGGGGGCTTTTCTGTGG 60.972 63.158 0.00 0.00 0.00 4.17
2248 4018 0.821711 TTGTCGGGGGCTTTTCTGTG 60.822 55.000 0.00 0.00 0.00 3.66
2249 4019 0.106419 TTTGTCGGGGGCTTTTCTGT 60.106 50.000 0.00 0.00 0.00 3.41
2250 4020 1.036707 TTTTGTCGGGGGCTTTTCTG 58.963 50.000 0.00 0.00 0.00 3.02
2251 4021 1.783071 TTTTTGTCGGGGGCTTTTCT 58.217 45.000 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.