Multiple sequence alignment - TraesCS1B01G186200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G186200 chr1B 100.000 9417 0 0 1 9417 332845714 332836298 0.000000e+00 17391.0
1 TraesCS1B01G186200 chr1B 92.778 180 4 4 5177 5347 121347342 121347521 1.570000e-62 252.0
2 TraesCS1B01G186200 chr1A 95.602 2706 75 11 5053 7742 306111640 306114317 0.000000e+00 4298.0
3 TraesCS1B01G186200 chr1A 93.884 2011 95 16 2181 4182 306108467 306110458 0.000000e+00 3007.0
4 TraesCS1B01G186200 chr1A 90.876 1666 81 24 555 2182 306106556 306108188 0.000000e+00 2169.0
5 TraesCS1B01G186200 chr1A 95.042 1311 32 15 7821 9116 306114312 306115604 0.000000e+00 2030.0
6 TraesCS1B01G186200 chr1A 96.500 1000 26 7 4183 5178 306110653 306111647 0.000000e+00 1644.0
7 TraesCS1B01G186200 chr1A 86.585 574 74 3 1 573 306105329 306105900 1.730000e-176 630.0
8 TraesCS1B01G186200 chr1A 90.476 210 17 3 9137 9345 306115674 306115881 3.350000e-69 274.0
9 TraesCS1B01G186200 chr1A 92.727 55 3 1 3017 3070 172685766 172685712 2.820000e-10 78.7
10 TraesCS1B01G186200 chr1A 92.727 55 3 1 3017 3070 353729093 353729147 2.820000e-10 78.7
11 TraesCS1B01G186200 chr1A 92.727 55 3 1 3017 3070 555453584 555453530 2.820000e-10 78.7
12 TraesCS1B01G186200 chr1D 95.983 2365 62 9 5115 7464 241226860 241229206 0.000000e+00 3810.0
13 TraesCS1B01G186200 chr1D 90.362 2210 130 28 3 2193 241221332 241223477 0.000000e+00 2824.0
14 TraesCS1B01G186200 chr1D 92.292 2011 89 18 2181 4182 241223735 241225688 0.000000e+00 2795.0
15 TraesCS1B01G186200 chr1D 95.385 1300 32 15 7825 9097 241229358 241230656 0.000000e+00 2043.0
16 TraesCS1B01G186200 chr1D 93.706 1001 22 6 4181 5178 241225889 241226851 0.000000e+00 1461.0
17 TraesCS1B01G186200 chr1D 97.500 160 4 0 7561 7720 241229202 241229361 3.350000e-69 274.0
18 TraesCS1B01G186200 chr1D 90.217 184 18 0 9160 9343 241231244 241231427 3.400000e-59 241.0
19 TraesCS1B01G186200 chr1D 93.750 64 4 0 9136 9199 241231141 241231204 7.780000e-16 97.1
20 TraesCS1B01G186200 chr5D 88.350 412 46 2 1 411 4295125 4294715 2.360000e-135 494.0
21 TraesCS1B01G186200 chr5D 88.642 405 44 2 1 404 556993983 556993580 8.500000e-135 492.0
22 TraesCS1B01G186200 chr5D 96.667 90 3 0 7737 7826 418431146 418431057 5.890000e-32 150.0
23 TraesCS1B01G186200 chr5D 98.039 51 1 0 3025 3075 137975048 137974998 1.300000e-13 89.8
24 TraesCS1B01G186200 chr6B 88.321 411 47 1 1 411 246742081 246742490 8.500000e-135 492.0
25 TraesCS1B01G186200 chr7D 88.424 406 47 0 1 406 467526884 467527289 3.060000e-134 490.0
26 TraesCS1B01G186200 chr7D 88.264 409 47 1 1 408 611303448 611303040 1.100000e-133 488.0
27 TraesCS1B01G186200 chr7D 93.333 105 4 3 7721 7825 163634827 163634726 1.640000e-32 152.0
28 TraesCS1B01G186200 chr6D 88.452 407 45 2 1 406 409726743 409726338 3.060000e-134 490.0
29 TraesCS1B01G186200 chr6D 88.078 411 47 2 1 411 262701342 262700934 3.950000e-133 486.0
30 TraesCS1B01G186200 chr2A 88.208 212 21 4 9136 9345 81015424 81015633 5.650000e-62 250.0
31 TraesCS1B01G186200 chr2A 87.081 209 22 4 9139 9345 459144665 459144460 2.050000e-56 231.0
32 TraesCS1B01G186200 chr4B 98.507 134 2 0 8820 8953 157013064 157013197 4.400000e-58 237.0
33 TraesCS1B01G186200 chr4B 93.204 103 5 2 7723 7825 50445489 50445589 5.890000e-32 150.0
34 TraesCS1B01G186200 chr5B 85.052 194 27 2 9153 9345 100842241 100842433 7.460000e-46 196.0
35 TraesCS1B01G186200 chr5B 98.000 50 1 0 3026 3075 187046404 187046355 4.680000e-13 87.9
36 TraesCS1B01G186200 chr3B 94.340 106 6 0 7729 7834 689513362 689513467 7.570000e-36 163.0
37 TraesCS1B01G186200 chr3B 97.753 89 2 0 7738 7826 42629625 42629537 4.550000e-33 154.0
38 TraesCS1B01G186200 chr2D 97.849 93 2 0 7736 7828 54963881 54963973 2.720000e-35 161.0
39 TraesCS1B01G186200 chr3D 96.842 95 3 0 7737 7831 322709877 322709971 9.790000e-35 159.0
40 TraesCS1B01G186200 chr3D 95.876 97 4 0 7739 7835 56336964 56336868 3.520000e-34 158.0
41 TraesCS1B01G186200 chr4A 94.231 104 4 2 7722 7825 625245924 625245823 3.520000e-34 158.0
42 TraesCS1B01G186200 chr5A 98.000 50 1 0 3026 3075 185649746 185649795 4.680000e-13 87.9
43 TraesCS1B01G186200 chr6A 92.727 55 3 1 3017 3070 88200813 88200867 2.820000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G186200 chr1B 332836298 332845714 9416 True 17391.000000 17391 100.000000 1 9417 1 chr1B.!!$R1 9416
1 TraesCS1B01G186200 chr1A 306105329 306115881 10552 False 2007.428571 4298 92.709286 1 9345 7 chr1A.!!$F2 9344
2 TraesCS1B01G186200 chr1D 241221332 241231427 10095 False 1693.137500 3810 93.649375 3 9343 8 chr1D.!!$F1 9340

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 505 0.246635 ACCCAGGTTCGTGAAGATCG 59.753 55.000 0.00 0.00 0.00 3.69 F
1727 2442 0.234884 CTTCAAACCACGAACGAGCC 59.765 55.000 0.14 0.00 0.00 4.70 F
2082 2798 0.107214 TTAGGATTTGCTCGGGCCTG 60.107 55.000 3.94 4.71 37.74 4.85 F
2343 3339 0.533755 GCTGTGACTCAGTTGCCTGT 60.534 55.000 6.40 0.00 45.23 4.00 F
3476 4474 1.361204 TGACAGGGATGGCAAGAGAA 58.639 50.000 0.00 0.00 0.00 2.87 F
3752 4750 2.146342 CCTAGCCCAGAATTATGCGTG 58.854 52.381 0.00 0.00 0.00 5.34 F
5231 6581 0.962356 ATGGCAAGGGCAAGAACTCG 60.962 55.000 0.00 0.00 42.43 4.18 F
5956 7309 1.342819 GGCTGTTAAACCATTGGCACA 59.657 47.619 1.54 0.30 0.00 4.57 F
7305 8672 0.107508 CATGACCTGGCTGTAGGGTG 60.108 60.000 0.00 0.82 42.35 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1937 2653 0.101399 CTGCTTGAGACGCGGATACT 59.899 55.0 12.47 3.86 35.81 2.12 R
3529 4527 0.870393 CGACAGCTGACAAACATGCT 59.130 50.0 23.35 0.00 34.90 3.79 R
3988 5009 0.107017 CCTGTGCCGAGGGATGAATT 60.107 55.0 0.00 0.00 0.00 2.17 R
3996 5017 0.249120 TATGTGAACCTGTGCCGAGG 59.751 55.0 0.00 0.00 39.28 4.63 R
4368 5599 0.322975 CCAAGGACAGAGTGGAGGTG 59.677 60.0 0.00 0.00 34.05 4.00 R
5401 6751 0.957395 AAGACCATTGCTGTGCCTCG 60.957 55.0 0.00 0.00 0.00 4.63 R
6140 7493 0.554305 AGCATCAGGCCCATTCATCA 59.446 50.0 0.00 0.00 46.50 3.07 R
7347 8714 0.040958 GTGCCTTTTCACTCTGTGCG 60.041 55.0 0.00 0.00 34.29 5.34 R
8616 9995 0.041312 CAACGTGTTTTGAGAGGCGG 60.041 55.0 0.00 0.00 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.454600 GCGTGAGGAGATTACGGTGA 59.545 55.000 0.00 0.00 38.20 4.02
42 43 3.294214 GAGGAGATTACGGTGACCCTAA 58.706 50.000 0.00 0.00 0.00 2.69
45 46 3.640029 GGAGATTACGGTGACCCTAATGA 59.360 47.826 10.03 0.00 0.00 2.57
65 66 0.535102 CTTTTCGGGGAGCACTGTGT 60.535 55.000 9.86 0.00 0.00 3.72
127 128 7.123847 AGGGTGTAAACTTCGAGATACATAGTT 59.876 37.037 5.41 0.00 31.57 2.24
133 134 7.633193 AACTTCGAGATACATAGTTGTCTCT 57.367 36.000 0.00 0.00 40.78 3.10
143 144 1.300931 GTTGTCTCTGCGTGCCTCA 60.301 57.895 0.00 0.00 0.00 3.86
260 262 2.006888 TGCTTAGCATAAGTCGTTGGC 58.993 47.619 1.39 0.00 31.71 4.52
338 340 5.925969 AGTTTTATTCCGCATTTGTTCAAGG 59.074 36.000 0.00 0.00 0.00 3.61
351 353 5.616488 TTGTTCAAGGCTAAACCGTAATC 57.384 39.130 9.44 0.00 46.52 1.75
369 371 8.899771 ACCGTAATCATTTTAAAGGGACTATTG 58.100 33.333 0.00 0.00 38.49 1.90
379 381 1.294068 AGGGACTATTGACCAGCCCTA 59.706 52.381 0.00 0.00 43.83 3.53
393 395 1.644786 GCCCTACACGCAACATCCAC 61.645 60.000 0.00 0.00 0.00 4.02
400 402 1.061131 CACGCAACATCCACGATCTTC 59.939 52.381 0.00 0.00 0.00 2.87
416 418 4.560716 CGATCTTCCACTTGTGTAACCTCA 60.561 45.833 0.00 0.00 34.36 3.86
459 461 4.819105 AACATTTCCTGAGACATACCGA 57.181 40.909 0.00 0.00 0.00 4.69
460 462 4.392921 ACATTTCCTGAGACATACCGAG 57.607 45.455 0.00 0.00 0.00 4.63
467 469 3.005261 CCTGAGACATACCGAGAGATTGG 59.995 52.174 0.00 0.00 0.00 3.16
477 479 1.043816 GAGAGATTGGAGATCGGGCA 58.956 55.000 0.00 0.00 0.00 5.36
490 492 2.195567 CGGGCATTGCATACCCAGG 61.196 63.158 16.85 1.13 44.49 4.45
503 505 0.246635 ACCCAGGTTCGTGAAGATCG 59.753 55.000 0.00 0.00 0.00 3.69
592 1275 6.855763 ATTCATGCTTGATTTGAACCCTAA 57.144 33.333 2.75 0.00 32.61 2.69
600 1283 3.751175 TGATTTGAACCCTAAACGCTGAG 59.249 43.478 0.00 0.00 0.00 3.35
601 1284 2.178912 TTGAACCCTAAACGCTGAGG 57.821 50.000 0.00 0.00 0.00 3.86
669 1352 5.895928 TCAAGATAGAGGAACAATCTGACG 58.104 41.667 0.00 0.00 30.50 4.35
672 1355 4.339814 AGATAGAGGAACAATCTGACGGTC 59.660 45.833 0.00 0.00 0.00 4.79
788 1483 1.145162 GCAACGCACAAAACCACCAG 61.145 55.000 0.00 0.00 0.00 4.00
793 1488 1.299316 CACAAAACCACCAGCAGCG 60.299 57.895 0.00 0.00 0.00 5.18
909 1612 2.917971 CAAAGCAAAACGTTCGAAACCA 59.082 40.909 0.00 0.00 0.00 3.67
956 1659 2.690497 CACGCCCAAATCTCTCTCTCTA 59.310 50.000 0.00 0.00 0.00 2.43
1513 2225 4.976864 GGGGTCAGTACACCTTTCTTTTA 58.023 43.478 2.65 0.00 46.68 1.52
1514 2226 5.379187 GGGGTCAGTACACCTTTCTTTTAA 58.621 41.667 2.65 0.00 46.68 1.52
1515 2227 5.240183 GGGGTCAGTACACCTTTCTTTTAAC 59.760 44.000 2.65 0.00 46.68 2.01
1516 2228 6.060136 GGGTCAGTACACCTTTCTTTTAACT 58.940 40.000 2.65 0.00 36.57 2.24
1517 2229 6.017357 GGGTCAGTACACCTTTCTTTTAACTG 60.017 42.308 2.65 0.00 36.57 3.16
1518 2230 6.427974 GTCAGTACACCTTTCTTTTAACTGC 58.572 40.000 0.00 0.00 34.51 4.40
1519 2231 6.260271 GTCAGTACACCTTTCTTTTAACTGCT 59.740 38.462 0.00 0.00 34.51 4.24
1520 2232 6.482308 TCAGTACACCTTTCTTTTAACTGCTC 59.518 38.462 0.00 0.00 34.51 4.26
1521 2233 5.763698 AGTACACCTTTCTTTTAACTGCTCC 59.236 40.000 0.00 0.00 0.00 4.70
1522 2234 3.564225 ACACCTTTCTTTTAACTGCTCCG 59.436 43.478 0.00 0.00 0.00 4.63
1523 2235 3.564225 CACCTTTCTTTTAACTGCTCCGT 59.436 43.478 0.00 0.00 0.00 4.69
1524 2236 3.564225 ACCTTTCTTTTAACTGCTCCGTG 59.436 43.478 0.00 0.00 0.00 4.94
1525 2237 3.058224 CCTTTCTTTTAACTGCTCCGTGG 60.058 47.826 0.00 0.00 0.00 4.94
1526 2238 3.478857 TTCTTTTAACTGCTCCGTGGA 57.521 42.857 0.00 0.00 0.00 4.02
1527 2239 3.040147 TCTTTTAACTGCTCCGTGGAG 57.960 47.619 11.67 11.67 44.56 3.86
1528 2240 2.631062 TCTTTTAACTGCTCCGTGGAGA 59.369 45.455 19.98 4.25 44.53 3.71
1529 2241 3.070446 TCTTTTAACTGCTCCGTGGAGAA 59.930 43.478 19.98 8.37 44.53 2.87
1530 2242 3.695830 TTTAACTGCTCCGTGGAGAAT 57.304 42.857 19.98 0.00 44.53 2.40
1531 2243 4.811969 TTTAACTGCTCCGTGGAGAATA 57.188 40.909 19.98 4.20 44.53 1.75
1540 2252 3.670625 TCCGTGGAGAATAACAAGTTGG 58.329 45.455 7.96 0.00 0.00 3.77
1541 2253 3.071892 TCCGTGGAGAATAACAAGTTGGT 59.928 43.478 7.96 2.53 0.00 3.67
1605 2317 0.897621 AACCTCGGGTTAGGGTTACG 59.102 55.000 6.53 0.00 44.94 3.18
1651 2363 3.763897 CCTCGGTTCAAAGATTGGGATTT 59.236 43.478 0.00 0.00 0.00 2.17
1655 2367 4.685628 CGGTTCAAAGATTGGGATTTTGTG 59.314 41.667 0.00 0.00 34.35 3.33
1657 2369 5.299949 GTTCAAAGATTGGGATTTTGTGCT 58.700 37.500 0.00 0.00 34.35 4.40
1727 2442 0.234884 CTTCAAACCACGAACGAGCC 59.765 55.000 0.14 0.00 0.00 4.70
1741 2456 1.448717 GAGCCCGCTCTGTTTCCTC 60.449 63.158 9.48 0.00 39.80 3.71
1761 2476 5.878669 TCCTCTTGTCTTGTGATGATGAATG 59.121 40.000 0.00 0.00 0.00 2.67
1779 2494 0.614812 TGGCTCAACTCATGCAGCTA 59.385 50.000 0.00 0.00 34.56 3.32
1782 2497 2.686915 GGCTCAACTCATGCAGCTAATT 59.313 45.455 0.00 0.00 34.56 1.40
1783 2498 3.243002 GGCTCAACTCATGCAGCTAATTC 60.243 47.826 0.00 0.00 34.56 2.17
1784 2499 3.545624 GCTCAACTCATGCAGCTAATTCG 60.546 47.826 0.00 0.00 32.68 3.34
1785 2500 2.352651 TCAACTCATGCAGCTAATTCGC 59.647 45.455 0.00 0.00 0.00 4.70
1786 2501 2.028420 ACTCATGCAGCTAATTCGCA 57.972 45.000 4.63 0.00 40.50 5.10
1787 2502 2.358957 ACTCATGCAGCTAATTCGCAA 58.641 42.857 4.63 0.00 39.48 4.85
1788 2503 2.749076 ACTCATGCAGCTAATTCGCAAA 59.251 40.909 4.63 0.00 39.48 3.68
1789 2504 3.379372 ACTCATGCAGCTAATTCGCAAAT 59.621 39.130 4.63 0.00 39.48 2.32
1790 2505 4.576053 ACTCATGCAGCTAATTCGCAAATA 59.424 37.500 4.63 0.00 39.48 1.40
1791 2506 5.240183 ACTCATGCAGCTAATTCGCAAATAT 59.760 36.000 4.63 0.00 39.48 1.28
1792 2507 6.427853 ACTCATGCAGCTAATTCGCAAATATA 59.572 34.615 4.63 0.00 39.48 0.86
1793 2508 7.041167 ACTCATGCAGCTAATTCGCAAATATAA 60.041 33.333 4.63 0.00 39.48 0.98
1794 2509 7.647228 TCATGCAGCTAATTCGCAAATATAAA 58.353 30.769 4.63 0.00 39.48 1.40
1795 2510 8.298854 TCATGCAGCTAATTCGCAAATATAAAT 58.701 29.630 4.63 0.00 39.48 1.40
1796 2511 8.581263 CATGCAGCTAATTCGCAAATATAAATC 58.419 33.333 4.63 0.00 39.48 2.17
1852 2568 2.351706 AGTTTGCTTTGTCGGGGTTA 57.648 45.000 0.00 0.00 0.00 2.85
1859 2575 2.554893 GCTTTGTCGGGGTTATTGTTGA 59.445 45.455 0.00 0.00 0.00 3.18
1865 2581 5.074115 TGTCGGGGTTATTGTTGAAGAATT 58.926 37.500 0.00 0.00 0.00 2.17
1912 2628 4.899457 TCCCCATCGACTAACTATCACAAT 59.101 41.667 0.00 0.00 0.00 2.71
1937 2653 4.261801 GGCTTAAGGAGTATGCACTTGAA 58.738 43.478 4.29 0.00 34.21 2.69
1938 2654 4.333926 GGCTTAAGGAGTATGCACTTGAAG 59.666 45.833 4.29 0.00 34.21 3.02
1943 2659 5.283457 AGGAGTATGCACTTGAAGTATCC 57.717 43.478 0.00 0.00 34.21 2.59
1958 2674 2.629050 TATCCGCGTCTCAAGCAGGC 62.629 60.000 4.92 0.00 34.19 4.85
1970 2686 0.892814 AAGCAGGCTGGTCTCTTTGC 60.893 55.000 20.86 0.00 0.00 3.68
1987 2703 3.923017 TTGCTTTTTGCTAAGAGCTCC 57.077 42.857 20.60 0.00 42.97 4.70
1993 2709 5.220758 GCTTTTTGCTAAGAGCTCCAGTATC 60.221 44.000 10.93 0.00 42.97 2.24
2002 2718 3.327172 AGAGCTCCAGTATCCCATGATTG 59.673 47.826 10.93 0.00 32.18 2.67
2020 2736 3.788333 TTGCATAAGAAGGAAGCATGC 57.212 42.857 10.51 10.51 41.81 4.06
2067 2783 4.164988 AGACATCTCCCCTGTTGAATTAGG 59.835 45.833 0.00 0.00 0.00 2.69
2076 2792 4.201950 CCCTGTTGAATTAGGATTTGCTCG 60.202 45.833 0.00 0.00 36.11 5.03
2082 2798 0.107214 TTAGGATTTGCTCGGGCCTG 60.107 55.000 3.94 4.71 37.74 4.85
2093 2809 0.820891 TCGGGCCTGTAGATACGTCC 60.821 60.000 12.43 0.00 0.00 4.79
2111 2827 3.120786 CGTCCGAAGAACATTGTTGGTAC 60.121 47.826 6.80 2.51 0.00 3.34
2147 2863 6.255887 CGTTGAACTCGAGCCTAATATTTCTT 59.744 38.462 13.61 0.00 0.00 2.52
2154 2870 6.740110 TCGAGCCTAATATTTCTTCTCTGTC 58.260 40.000 0.00 0.00 0.00 3.51
2173 2889 7.400339 TCTCTGTCCAGGAGAGTATACATTTTT 59.600 37.037 13.33 0.00 38.51 1.94
2218 3214 3.639094 GGGTGTGTCTATAGCTCAGTCAT 59.361 47.826 0.00 0.00 0.00 3.06
2224 3220 7.227711 GTGTGTCTATAGCTCAGTCATCTTAGA 59.772 40.741 0.00 0.00 0.00 2.10
2225 3221 7.941790 TGTGTCTATAGCTCAGTCATCTTAGAT 59.058 37.037 0.00 0.00 0.00 1.98
2260 3256 2.578021 AGTCAACATTGGTAGCCATCCT 59.422 45.455 0.00 0.00 31.53 3.24
2261 3257 2.684881 GTCAACATTGGTAGCCATCCTG 59.315 50.000 0.00 0.00 31.53 3.86
2263 3259 2.424601 CAACATTGGTAGCCATCCTGTG 59.575 50.000 0.00 0.00 31.53 3.66
2270 3266 2.224402 GGTAGCCATCCTGTGAAGATCC 60.224 54.545 0.00 0.00 0.00 3.36
2281 3277 4.478203 CTGTGAAGATCCTCTCATCCCTA 58.522 47.826 0.00 0.00 0.00 3.53
2282 3278 5.085275 TGTGAAGATCCTCTCATCCCTAT 57.915 43.478 0.00 0.00 0.00 2.57
2285 3281 4.285517 TGAAGATCCTCTCATCCCTATTGC 59.714 45.833 0.00 0.00 0.00 3.56
2305 3301 3.645884 GCAGTTGCACAATCTCAATGTT 58.354 40.909 0.00 0.00 41.59 2.71
2343 3339 0.533755 GCTGTGACTCAGTTGCCTGT 60.534 55.000 6.40 0.00 45.23 4.00
2354 3350 4.081406 TCAGTTGCCTGTGAAATAGCAAT 58.919 39.130 0.00 0.00 46.00 3.56
2357 3353 4.399303 AGTTGCCTGTGAAATAGCAATACC 59.601 41.667 0.00 0.00 46.00 2.73
2390 3386 2.226962 AAGGGCATGCTTGAAGTGAT 57.773 45.000 18.92 0.00 0.00 3.06
2403 3399 5.645497 GCTTGAAGTGATGATGTTACCTCTT 59.355 40.000 0.00 0.00 0.00 2.85
2450 3446 7.827236 TGTTTTACCCATTTCTACATCTGTAGG 59.173 37.037 15.46 4.09 46.01 3.18
2463 3459 4.700213 ACATCTGTAGGTGGTTAACATTGC 59.300 41.667 8.10 0.00 0.00 3.56
2473 3469 6.016276 AGGTGGTTAACATTGCTGAAAGTAAG 60.016 38.462 8.10 0.00 43.26 2.34
2550 3546 8.832521 AGTAATCTATTGAGTCTGAGAAGTACG 58.167 37.037 0.00 0.00 0.00 3.67
2556 3552 9.360093 CTATTGAGTCTGAGAAGTACGAAAATT 57.640 33.333 0.00 0.00 0.00 1.82
2565 3561 9.543018 CTGAGAAGTACGAAAATTAAAATCACC 57.457 33.333 0.00 0.00 0.00 4.02
2570 3566 8.496872 AGTACGAAAATTAAAATCACCGTTTG 57.503 30.769 0.00 0.00 0.00 2.93
2571 3567 6.757026 ACGAAAATTAAAATCACCGTTTGG 57.243 33.333 0.00 0.00 42.84 3.28
2586 3582 4.637977 ACCGTTTGGCAAACATTTCATTTT 59.362 33.333 34.54 10.87 41.44 1.82
2635 3632 5.824624 CCCATCTTATACTCACAAGTGCATT 59.175 40.000 0.00 0.00 36.92 3.56
2811 3808 1.612676 TTCTGTGCATGCTGCTTTCT 58.387 45.000 20.33 0.00 45.31 2.52
2855 3852 5.332707 TCTCACGAATCACAAAGATACTCG 58.667 41.667 0.00 0.00 40.87 4.18
2871 3868 3.425577 ACTCGTGTCGTGACAAAGTTA 57.574 42.857 3.92 0.00 43.77 2.24
2946 3944 9.844790 TGCATGATAAAAATAACTTCAGTTCAG 57.155 29.630 0.00 0.00 39.31 3.02
2947 3945 8.801913 GCATGATAAAAATAACTTCAGTTCAGC 58.198 33.333 0.00 0.00 39.31 4.26
2951 3949 8.728088 ATAAAAATAACTTCAGTTCAGCAACG 57.272 30.769 0.00 0.00 39.31 4.10
3023 4021 6.017830 ACTCTAGCTAGTTTAACACTCCCTT 58.982 40.000 20.10 0.00 36.88 3.95
3032 4030 6.056236 AGTTTAACACTCCCTTTCAAGTCTC 58.944 40.000 0.00 0.00 0.00 3.36
3038 4036 6.056236 ACACTCCCTTTCAAGTCTCTAAAAC 58.944 40.000 0.00 0.00 0.00 2.43
3143 4141 2.466846 CCAACAGTTGCTGCTCTTTTG 58.533 47.619 7.88 8.82 34.37 2.44
3153 4151 4.005650 TGCTGCTCTTTTGATACTTCTGG 58.994 43.478 0.00 0.00 0.00 3.86
3158 4156 5.221925 TGCTCTTTTGATACTTCTGGGTTCT 60.222 40.000 0.00 0.00 0.00 3.01
3418 4416 8.658619 AGCTCAGAGGATATCATATCAAAAGTT 58.341 33.333 6.99 0.00 0.00 2.66
3476 4474 1.361204 TGACAGGGATGGCAAGAGAA 58.639 50.000 0.00 0.00 0.00 2.87
3529 4527 5.163774 GCTTGCTTTGTTGACAATGGAAAAA 60.164 36.000 14.33 0.00 39.47 1.94
3535 4533 5.021033 TGTTGACAATGGAAAAAGCATGT 57.979 34.783 0.00 0.00 0.00 3.21
3752 4750 2.146342 CCTAGCCCAGAATTATGCGTG 58.854 52.381 0.00 0.00 0.00 5.34
3760 4758 4.398044 CCCAGAATTATGCGTGGTAACTTT 59.602 41.667 0.00 0.00 37.61 2.66
3762 4760 5.799936 CCAGAATTATGCGTGGTAACTTTTG 59.200 40.000 0.00 0.00 37.61 2.44
3772 4770 5.460748 GCGTGGTAACTTTTGTTTTTGCTAT 59.539 36.000 0.00 0.00 43.32 2.97
3773 4771 6.561350 GCGTGGTAACTTTTGTTTTTGCTATG 60.561 38.462 0.00 0.00 43.32 2.23
3945 4943 5.931146 CACTGGAGGTATGATCTTGCTTATC 59.069 44.000 0.00 0.00 0.00 1.75
3950 4948 8.713971 TGGAGGTATGATCTTGCTTATCTTTTA 58.286 33.333 0.00 0.00 0.00 1.52
4000 5021 8.615878 TGTATTTTATGGTAATTCATCCCTCG 57.384 34.615 0.00 0.00 0.00 4.63
4001 5022 7.663905 TGTATTTTATGGTAATTCATCCCTCGG 59.336 37.037 0.00 0.00 0.00 4.63
4103 5124 8.545472 TGTAGTCTGTACATTTTAAGCCCTAAT 58.455 33.333 0.00 0.00 0.00 1.73
4132 5153 4.397730 TGAAGCTGCACACTAAAACTTTGA 59.602 37.500 1.02 0.00 0.00 2.69
4133 5154 4.981806 AGCTGCACACTAAAACTTTGAA 57.018 36.364 1.02 0.00 0.00 2.69
4134 5155 5.520376 AGCTGCACACTAAAACTTTGAAT 57.480 34.783 1.02 0.00 0.00 2.57
4135 5156 5.284079 AGCTGCACACTAAAACTTTGAATG 58.716 37.500 1.02 0.00 0.00 2.67
4163 5189 4.771590 ATGCTGCGAAATTTTCTCTGAA 57.228 36.364 7.50 0.00 0.00 3.02
4221 5449 2.197465 AGTTTATGACCTGGGTCTCCC 58.803 52.381 18.92 0.00 44.80 4.30
4243 5471 6.434652 TCCCGATGTGTACACCATTTATTTTT 59.565 34.615 22.91 0.00 0.00 1.94
4368 5599 8.974060 TTGTATATCAGGGAATTGTAAAGGAC 57.026 34.615 0.00 0.00 0.00 3.85
4392 5623 1.625315 TCCACTCTGTCCTTGGACATG 59.375 52.381 21.09 16.30 34.35 3.21
4422 5653 1.057636 CATCTTTGCAAAGTGCTGCG 58.942 50.000 32.46 15.37 45.74 5.18
4522 5753 4.218200 TGGAATGTTAGTTCAGTGCAATGG 59.782 41.667 15.06 0.00 31.73 3.16
4638 5869 3.056179 AGAGGCTCTACAGTTTCTCTTGC 60.056 47.826 17.09 0.00 0.00 4.01
4756 5988 5.461078 CCACTTTGAAAACTTGCAATCTGAG 59.539 40.000 0.00 0.08 0.00 3.35
4812 6044 5.532406 CCTTCAGAATTCTTCCACTGTTTCA 59.468 40.000 4.86 0.00 0.00 2.69
5080 6312 4.734854 GCACAAATGTTCACTGTACACAAG 59.265 41.667 0.00 0.00 0.00 3.16
5105 6337 7.284489 AGACTATGATGTTCACCTTCTAGTCTC 59.716 40.741 10.04 0.00 35.85 3.36
5231 6581 0.962356 ATGGCAAGGGCAAGAACTCG 60.962 55.000 0.00 0.00 42.43 4.18
5297 6647 6.514705 GCTCATCTTCCAAATTAGATGCTTCC 60.515 42.308 10.03 0.00 44.68 3.46
5401 6751 3.428045 GCATCAAGTGGTTCATTAGGTGC 60.428 47.826 0.00 0.00 0.00 5.01
5504 6854 5.424757 TCAAGTGGATGGGTTTCTATAACG 58.575 41.667 0.00 0.00 0.00 3.18
5564 6914 2.316792 CGACGACGTCTGTCTGAAAAT 58.683 47.619 24.36 2.27 43.21 1.82
5806 7159 6.908870 TTCTAATGTTGACGATGATTCCAG 57.091 37.500 0.00 0.00 0.00 3.86
5851 7204 9.443246 TTTGGCATCAATTAAGGTAAGCCTTCG 62.443 40.741 1.77 0.00 42.16 3.79
5886 7239 6.763355 TGGCTGGCATATTTTTGTAAAGAAA 58.237 32.000 0.00 0.00 0.00 2.52
5930 7283 3.557577 TTGTCCATTTGTGAATGCTCG 57.442 42.857 0.00 0.00 41.06 5.03
5948 7301 3.431207 GCTCGGTATAGGCTGTTAAACCA 60.431 47.826 0.00 0.00 0.00 3.67
5953 7306 4.037565 GGTATAGGCTGTTAAACCATTGGC 59.962 45.833 1.54 0.00 0.00 4.52
5954 7307 2.008242 AGGCTGTTAAACCATTGGCA 57.992 45.000 1.54 0.00 0.00 4.92
5955 7308 1.618343 AGGCTGTTAAACCATTGGCAC 59.382 47.619 1.54 0.00 0.00 5.01
5956 7309 1.342819 GGCTGTTAAACCATTGGCACA 59.657 47.619 1.54 0.30 0.00 4.57
5957 7310 2.028203 GGCTGTTAAACCATTGGCACAT 60.028 45.455 1.54 0.00 39.30 3.21
5958 7311 3.556843 GGCTGTTAAACCATTGGCACATT 60.557 43.478 1.54 0.00 39.30 2.71
5959 7312 4.064388 GCTGTTAAACCATTGGCACATTT 58.936 39.130 1.54 0.00 39.30 2.32
5960 7313 4.514816 GCTGTTAAACCATTGGCACATTTT 59.485 37.500 1.54 0.00 39.30 1.82
5961 7314 5.008514 GCTGTTAAACCATTGGCACATTTTT 59.991 36.000 1.54 0.00 39.30 1.94
5984 7337 7.583860 TTTCAATGTGTGAATTCGTACGATA 57.416 32.000 20.27 10.51 45.71 2.92
6023 7376 7.888021 AGATCTTTCACCATTTATACCACACAA 59.112 33.333 0.00 0.00 0.00 3.33
6104 7457 7.993821 AAGACAAATATACATCAGTCTGTCG 57.006 36.000 0.00 0.00 37.58 4.35
6152 7505 2.029649 GTGCATACATGATGAATGGGCC 60.030 50.000 0.00 0.00 40.94 5.80
6153 7506 2.158430 TGCATACATGATGAATGGGCCT 60.158 45.455 4.53 0.00 40.94 5.19
6242 7600 6.307077 GCTTTAGTTGGGTTTAAGCATTAACG 59.693 38.462 0.00 0.00 40.86 3.18
6338 7704 9.466497 AACTGAAGATAAAATTAATCCAGAGCA 57.534 29.630 0.00 0.00 0.00 4.26
6430 7796 3.003585 ACCTTTAAACGGTTTTAGGTGCG 59.996 43.478 26.19 10.92 36.05 5.34
6508 7874 9.516314 ACAATAAGTTGTTTTTGAAAGACTAGC 57.484 29.630 0.27 0.00 46.07 3.42
6576 7942 5.451520 CGGCCTAAGCTTAACTGTACATACT 60.452 44.000 7.74 0.00 39.73 2.12
6656 8022 9.823647 CTCTTATCATTTTCTGCTCCTTACTAA 57.176 33.333 0.00 0.00 0.00 2.24
6728 8094 2.105993 ACTGTAACTGTCCAAAGGGTCC 59.894 50.000 0.00 0.00 34.93 4.46
6732 8098 4.351407 TGTAACTGTCCAAAGGGTCCAATA 59.649 41.667 0.00 0.00 34.93 1.90
6788 8154 2.959507 ACTTTTGAACAGTTGGTGGC 57.040 45.000 0.00 0.00 0.00 5.01
6801 8167 4.218200 CAGTTGGTGGCTGATGTTTTATGA 59.782 41.667 0.00 0.00 36.12 2.15
7254 8621 4.093011 GGGTCTGGAGCAGTCATATATCT 58.907 47.826 2.27 0.00 32.61 1.98
7255 8622 4.081752 GGGTCTGGAGCAGTCATATATCTG 60.082 50.000 2.27 0.00 32.61 2.90
7305 8672 0.107508 CATGACCTGGCTGTAGGGTG 60.108 60.000 0.00 0.82 42.35 4.61
7347 8714 6.146347 GTGTTTCTGTGGATCTGTCTAAGAAC 59.854 42.308 0.00 0.00 38.79 3.01
7350 8717 2.560981 TGTGGATCTGTCTAAGAACGCA 59.439 45.455 0.00 0.00 38.79 5.24
7465 8832 8.672823 ATCACCGGTAATTCTAACCTTAATTC 57.327 34.615 6.87 0.00 34.66 2.17
7546 8913 4.274147 TCCAAAGTACCTTCTGTTTTGCA 58.726 39.130 0.00 0.00 0.00 4.08
7547 8914 4.338118 TCCAAAGTACCTTCTGTTTTGCAG 59.662 41.667 0.00 0.00 46.34 4.41
7548 8915 3.990318 AAGTACCTTCTGTTTTGCAGC 57.010 42.857 0.00 0.00 44.66 5.25
7549 8916 2.930950 AGTACCTTCTGTTTTGCAGCA 58.069 42.857 0.00 0.00 44.66 4.41
7550 8917 3.490348 AGTACCTTCTGTTTTGCAGCAT 58.510 40.909 0.00 0.00 44.66 3.79
7551 8918 4.651778 AGTACCTTCTGTTTTGCAGCATA 58.348 39.130 0.00 0.00 44.66 3.14
7552 8919 5.256474 AGTACCTTCTGTTTTGCAGCATAT 58.744 37.500 0.00 0.00 44.66 1.78
7555 8922 4.523943 ACCTTCTGTTTTGCAGCATATTGA 59.476 37.500 0.00 0.00 44.66 2.57
7559 8926 7.760794 CCTTCTGTTTTGCAGCATATTGAATAA 59.239 33.333 0.00 0.00 44.66 1.40
7624 8991 6.183360 GCATTTGTAGGCTTTGATATCCAGTT 60.183 38.462 0.00 0.00 0.00 3.16
7742 9109 9.900710 CCTTGTATGATGTTCTGTATAGTACTC 57.099 37.037 0.00 0.00 0.00 2.59
7743 9110 9.900710 CTTGTATGATGTTCTGTATAGTACTCC 57.099 37.037 0.00 0.00 0.00 3.85
7744 9111 8.405418 TGTATGATGTTCTGTATAGTACTCCC 57.595 38.462 0.00 0.00 0.00 4.30
7745 9112 8.225416 TGTATGATGTTCTGTATAGTACTCCCT 58.775 37.037 0.00 0.00 0.00 4.20
7746 9113 7.768807 ATGATGTTCTGTATAGTACTCCCTC 57.231 40.000 0.00 0.00 0.00 4.30
7747 9114 6.912426 TGATGTTCTGTATAGTACTCCCTCT 58.088 40.000 0.00 0.00 0.00 3.69
7748 9115 6.773200 TGATGTTCTGTATAGTACTCCCTCTG 59.227 42.308 0.00 0.00 0.00 3.35
7749 9116 6.075949 TGTTCTGTATAGTACTCCCTCTGT 57.924 41.667 0.00 0.00 0.00 3.41
7750 9117 6.491383 TGTTCTGTATAGTACTCCCTCTGTT 58.509 40.000 0.00 0.00 0.00 3.16
7751 9118 6.602406 TGTTCTGTATAGTACTCCCTCTGTTC 59.398 42.308 0.00 0.00 0.00 3.18
7752 9119 5.692928 TCTGTATAGTACTCCCTCTGTTCC 58.307 45.833 0.00 0.00 0.00 3.62
7753 9120 5.193124 TCTGTATAGTACTCCCTCTGTTCCA 59.807 44.000 0.00 0.00 0.00 3.53
7754 9121 5.834460 TGTATAGTACTCCCTCTGTTCCAA 58.166 41.667 0.00 0.00 0.00 3.53
7755 9122 6.258354 TGTATAGTACTCCCTCTGTTCCAAA 58.742 40.000 0.00 0.00 0.00 3.28
7756 9123 6.727231 TGTATAGTACTCCCTCTGTTCCAAAA 59.273 38.462 0.00 0.00 0.00 2.44
7757 9124 6.893020 ATAGTACTCCCTCTGTTCCAAAAT 57.107 37.500 0.00 0.00 0.00 1.82
7758 9125 7.989947 ATAGTACTCCCTCTGTTCCAAAATA 57.010 36.000 0.00 0.00 0.00 1.40
7759 9126 6.301169 AGTACTCCCTCTGTTCCAAAATAG 57.699 41.667 0.00 0.00 0.00 1.73
7760 9127 6.023603 AGTACTCCCTCTGTTCCAAAATAGA 58.976 40.000 0.00 0.00 32.42 1.98
7761 9128 6.674419 AGTACTCCCTCTGTTCCAAAATAGAT 59.326 38.462 0.00 0.00 32.88 1.98
7762 9129 5.749462 ACTCCCTCTGTTCCAAAATAGATG 58.251 41.667 0.00 0.00 32.88 2.90
7763 9130 5.488919 ACTCCCTCTGTTCCAAAATAGATGA 59.511 40.000 0.00 0.00 32.88 2.92
7764 9131 5.745227 TCCCTCTGTTCCAAAATAGATGAC 58.255 41.667 0.00 0.00 32.88 3.06
7765 9132 4.884164 CCCTCTGTTCCAAAATAGATGACC 59.116 45.833 0.00 0.00 32.88 4.02
7766 9133 4.884164 CCTCTGTTCCAAAATAGATGACCC 59.116 45.833 0.00 0.00 32.88 4.46
7767 9134 5.500234 CTCTGTTCCAAAATAGATGACCCA 58.500 41.667 0.00 0.00 32.88 4.51
7768 9135 5.886609 TCTGTTCCAAAATAGATGACCCAA 58.113 37.500 0.00 0.00 28.72 4.12
7769 9136 5.710099 TCTGTTCCAAAATAGATGACCCAAC 59.290 40.000 0.00 0.00 28.72 3.77
7770 9137 5.640147 TGTTCCAAAATAGATGACCCAACT 58.360 37.500 0.00 0.00 0.00 3.16
7771 9138 6.074648 TGTTCCAAAATAGATGACCCAACTT 58.925 36.000 0.00 0.00 0.00 2.66
7772 9139 6.553100 TGTTCCAAAATAGATGACCCAACTTT 59.447 34.615 0.00 0.00 0.00 2.66
7773 9140 7.726291 TGTTCCAAAATAGATGACCCAACTTTA 59.274 33.333 0.00 0.00 0.00 1.85
7774 9141 8.749354 GTTCCAAAATAGATGACCCAACTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
7775 9142 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
7776 9143 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
7777 9144 9.408648 CCAAAATAGATGACCCAACTTTATACT 57.591 33.333 0.00 0.00 0.00 2.12
7799 9166 9.716531 ATACTAACTTTAGTACAAAGTTGGGTC 57.283 33.333 28.62 0.00 46.38 4.46
7800 9167 7.567458 ACTAACTTTAGTACAAAGTTGGGTCA 58.433 34.615 28.62 17.50 46.38 4.02
7801 9168 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
7802 9169 7.506328 AACTTTAGTACAAAGTTGGGTCATC 57.494 36.000 23.48 0.00 45.58 2.92
7803 9170 6.838382 ACTTTAGTACAAAGTTGGGTCATCT 58.162 36.000 14.04 0.00 37.18 2.90
7804 9171 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
7805 9172 8.603304 ACTTTAGTACAAAGTTGGGTCATCTAT 58.397 33.333 14.04 0.00 37.18 1.98
7806 9173 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
7807 9174 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
7808 9175 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
7809 9176 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
7810 9177 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
7811 9178 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
7812 9179 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
7813 9180 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
7814 9181 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
7815 9182 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
7816 9183 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
7817 9184 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
7818 9185 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
7819 9186 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
7820 9187 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
7821 9188 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
7822 9189 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
7823 9190 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
7824 9191 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
7825 9192 0.978907 TTTGGAACGGAGGGAGTACC 59.021 55.000 0.00 0.00 40.67 3.34
8039 9414 7.103641 AGTTGTCGTCTGTAATGTTCCATTAT 58.896 34.615 0.47 0.00 0.00 1.28
8495 9874 0.680061 ACAAGTGTTCCTCCTCGTCC 59.320 55.000 0.00 0.00 0.00 4.79
8541 9920 3.059597 CAGTCGTCTTGCAACTAACCAAG 60.060 47.826 0.00 0.00 39.74 3.61
8593 9972 3.353836 CCCCCTGTTGTTGTCGCG 61.354 66.667 0.00 0.00 0.00 5.87
8616 9995 1.405105 TCTTTTGTGTGTGCTCCTTGC 59.595 47.619 0.00 0.00 43.25 4.01
8654 10033 6.693545 CACGTTGTTTACTTAGCCAATTCAAA 59.306 34.615 0.00 0.00 0.00 2.69
8825 10204 2.485479 GCCTCCTGTGTCTGAAACAGAA 60.485 50.000 25.94 8.15 46.55 3.02
8826 10205 3.808728 CCTCCTGTGTCTGAAACAGAAA 58.191 45.455 25.94 14.10 46.55 2.52
8827 10206 3.812053 CCTCCTGTGTCTGAAACAGAAAG 59.188 47.826 25.94 20.78 46.55 2.62
8911 10304 8.531530 GTTGCTAGTCAATTACACAAAAAGTTG 58.468 33.333 3.47 0.00 37.62 3.16
9057 10575 3.252215 TGAAAAGGGTAGTCGTGCATTTG 59.748 43.478 0.00 0.00 0.00 2.32
9076 10594 3.586470 TGTTAGGCCCTCTTTGTTTGA 57.414 42.857 0.00 0.00 0.00 2.69
9083 10601 3.084786 GCCCTCTTTGTTTGAGCTACAT 58.915 45.455 0.00 0.00 0.00 2.29
9116 10776 7.547227 AGAATTTGTTGTGGCTTGGATTATAC 58.453 34.615 0.00 0.00 0.00 1.47
9118 10778 6.509418 TTTGTTGTGGCTTGGATTATACTC 57.491 37.500 0.00 0.00 0.00 2.59
9119 10779 4.523083 TGTTGTGGCTTGGATTATACTCC 58.477 43.478 2.15 2.15 35.74 3.85
9120 10780 3.857157 TGTGGCTTGGATTATACTCCC 57.143 47.619 6.66 0.00 34.12 4.30
9121 10781 3.393687 TGTGGCTTGGATTATACTCCCT 58.606 45.455 6.66 0.00 34.12 4.20
9122 10782 3.391296 TGTGGCTTGGATTATACTCCCTC 59.609 47.826 6.66 0.00 34.12 4.30
9123 10783 2.979678 TGGCTTGGATTATACTCCCTCC 59.020 50.000 6.66 5.78 34.12 4.30
9124 10784 2.028020 GGCTTGGATTATACTCCCTCCG 60.028 54.545 6.66 0.00 34.12 4.63
9125 10785 2.633481 GCTTGGATTATACTCCCTCCGT 59.367 50.000 6.66 0.00 34.12 4.69
9126 10786 3.071167 GCTTGGATTATACTCCCTCCGTT 59.929 47.826 6.66 0.00 34.12 4.44
9128 10788 3.236896 TGGATTATACTCCCTCCGTTCC 58.763 50.000 6.66 0.00 34.12 3.62
9129 10789 3.236896 GGATTATACTCCCTCCGTTCCA 58.763 50.000 0.00 0.00 0.00 3.53
9130 10790 3.644738 GGATTATACTCCCTCCGTTCCAA 59.355 47.826 0.00 0.00 0.00 3.53
9131 10791 4.262506 GGATTATACTCCCTCCGTTCCAAG 60.263 50.000 0.00 0.00 0.00 3.61
9132 10792 2.544844 ATACTCCCTCCGTTCCAAGA 57.455 50.000 0.00 0.00 0.00 3.02
9133 10793 2.314071 TACTCCCTCCGTTCCAAGAA 57.686 50.000 0.00 0.00 0.00 2.52
9134 10794 0.685660 ACTCCCTCCGTTCCAAGAAC 59.314 55.000 0.00 0.00 0.00 3.01
9149 10995 0.323451 AGAACGGAGGAAATTGGGCC 60.323 55.000 0.00 0.00 0.00 5.80
9187 11033 5.769484 TTCTAGCGTAATAACAGGGAGAG 57.231 43.478 0.00 0.00 0.00 3.20
9298 11223 3.920412 GCACAATTCCAAAACCGATTCTC 59.080 43.478 0.00 0.00 0.00 2.87
9312 11237 5.764131 ACCGATTCTCGAAAGCTAAGATAG 58.236 41.667 0.00 0.00 43.74 2.08
9337 11262 8.689972 AGAAATCTGAGTGTTTGTTTGAGATTT 58.310 29.630 0.00 0.00 39.95 2.17
9344 11269 9.434420 TGAGTGTTTGTTTGAGATTTTGATTTT 57.566 25.926 0.00 0.00 0.00 1.82
9366 11291 2.286365 TTTTGCGGGGTTGAGATTCT 57.714 45.000 0.00 0.00 0.00 2.40
9367 11292 1.533625 TTTGCGGGGTTGAGATTCTG 58.466 50.000 0.00 0.00 0.00 3.02
9368 11293 0.690192 TTGCGGGGTTGAGATTCTGA 59.310 50.000 0.00 0.00 0.00 3.27
9369 11294 0.911769 TGCGGGGTTGAGATTCTGAT 59.088 50.000 0.00 0.00 0.00 2.90
9370 11295 1.281867 TGCGGGGTTGAGATTCTGATT 59.718 47.619 0.00 0.00 0.00 2.57
9371 11296 2.290896 TGCGGGGTTGAGATTCTGATTT 60.291 45.455 0.00 0.00 0.00 2.17
9372 11297 2.755103 GCGGGGTTGAGATTCTGATTTT 59.245 45.455 0.00 0.00 0.00 1.82
9373 11298 3.428045 GCGGGGTTGAGATTCTGATTTTG 60.428 47.826 0.00 0.00 0.00 2.44
9374 11299 3.129287 CGGGGTTGAGATTCTGATTTTGG 59.871 47.826 0.00 0.00 0.00 3.28
9375 11300 4.344104 GGGGTTGAGATTCTGATTTTGGA 58.656 43.478 0.00 0.00 0.00 3.53
9376 11301 4.158579 GGGGTTGAGATTCTGATTTTGGAC 59.841 45.833 0.00 0.00 0.00 4.02
9377 11302 4.142600 GGGTTGAGATTCTGATTTTGGACG 60.143 45.833 0.00 0.00 0.00 4.79
9378 11303 4.142600 GGTTGAGATTCTGATTTTGGACGG 60.143 45.833 0.00 0.00 0.00 4.79
9379 11304 3.609853 TGAGATTCTGATTTTGGACGGG 58.390 45.455 0.00 0.00 0.00 5.28
9380 11305 3.009033 TGAGATTCTGATTTTGGACGGGT 59.991 43.478 0.00 0.00 0.00 5.28
9381 11306 4.010349 GAGATTCTGATTTTGGACGGGTT 58.990 43.478 0.00 0.00 0.00 4.11
9382 11307 5.174037 AGATTCTGATTTTGGACGGGTTA 57.826 39.130 0.00 0.00 0.00 2.85
9383 11308 5.186198 AGATTCTGATTTTGGACGGGTTAG 58.814 41.667 0.00 0.00 0.00 2.34
9384 11309 4.627284 TTCTGATTTTGGACGGGTTAGA 57.373 40.909 0.00 0.00 0.00 2.10
9385 11310 4.627284 TCTGATTTTGGACGGGTTAGAA 57.373 40.909 0.00 0.00 0.00 2.10
9386 11311 5.174037 TCTGATTTTGGACGGGTTAGAAT 57.826 39.130 0.00 0.00 0.00 2.40
9387 11312 5.183228 TCTGATTTTGGACGGGTTAGAATC 58.817 41.667 0.00 0.00 0.00 2.52
9388 11313 4.266714 TGATTTTGGACGGGTTAGAATCC 58.733 43.478 0.00 0.00 0.00 3.01
9389 11314 3.791953 TTTTGGACGGGTTAGAATCCA 57.208 42.857 0.00 0.00 39.50 3.41
9390 11315 3.791953 TTTGGACGGGTTAGAATCCAA 57.208 42.857 0.42 0.42 46.92 3.53
9391 11316 3.343941 TTGGACGGGTTAGAATCCAAG 57.656 47.619 0.42 0.00 44.43 3.61
9392 11317 2.542550 TGGACGGGTTAGAATCCAAGA 58.457 47.619 0.00 0.00 38.30 3.02
9393 11318 2.907696 TGGACGGGTTAGAATCCAAGAA 59.092 45.455 0.00 0.00 38.30 2.52
9394 11319 3.521937 TGGACGGGTTAGAATCCAAGAAT 59.478 43.478 0.00 0.00 38.30 2.40
9395 11320 4.127907 GGACGGGTTAGAATCCAAGAATC 58.872 47.826 0.00 0.00 0.00 2.52
9396 11321 4.141688 GGACGGGTTAGAATCCAAGAATCT 60.142 45.833 0.00 0.00 0.00 2.40
9397 11322 5.429130 GACGGGTTAGAATCCAAGAATCTT 58.571 41.667 0.00 0.00 0.00 2.40
9398 11323 5.816682 ACGGGTTAGAATCCAAGAATCTTT 58.183 37.500 0.00 0.00 0.00 2.52
9399 11324 6.246163 ACGGGTTAGAATCCAAGAATCTTTT 58.754 36.000 0.00 0.00 0.00 2.27
9400 11325 6.719829 ACGGGTTAGAATCCAAGAATCTTTTT 59.280 34.615 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.238898 CTCCCCGAAAAGTCATTAGGGT 59.761 50.000 4.81 0.00 37.38 4.34
42 43 0.693049 AGTGCTCCCCGAAAAGTCAT 59.307 50.000 0.00 0.00 0.00 3.06
45 46 0.535102 CACAGTGCTCCCCGAAAAGT 60.535 55.000 0.00 0.00 0.00 2.66
65 66 1.522668 CGTTTGGAGCCATGTGAAGA 58.477 50.000 0.00 0.00 0.00 2.87
133 134 1.186200 AGAGATAACTGAGGCACGCA 58.814 50.000 0.00 0.00 36.25 5.24
143 144 2.091222 AGGGCTCGGGTAAGAGATAACT 60.091 50.000 0.00 0.00 40.57 2.24
254 256 1.695893 CTCACCTATGTGCGCCAACG 61.696 60.000 4.18 0.00 42.46 4.10
260 262 3.561310 ACAAATATGCTCACCTATGTGCG 59.439 43.478 0.00 0.00 46.23 5.34
275 277 8.180920 GTCAAGCACAAAACCAAAAACAAATAT 58.819 29.630 0.00 0.00 0.00 1.28
278 280 5.296780 TGTCAAGCACAAAACCAAAAACAAA 59.703 32.000 0.00 0.00 29.30 2.83
311 313 6.686630 TGAACAAATGCGGAATAAAACTCAT 58.313 32.000 0.00 0.00 0.00 2.90
313 315 6.089417 CCTTGAACAAATGCGGAATAAAACTC 59.911 38.462 0.00 0.00 0.00 3.01
338 340 7.699391 GTCCCTTTAAAATGATTACGGTTTAGC 59.301 37.037 0.00 0.00 0.00 3.09
351 353 6.405842 GGCTGGTCAATAGTCCCTTTAAAATG 60.406 42.308 0.00 0.00 0.00 2.32
369 371 2.033194 GTTGCGTGTAGGGCTGGTC 61.033 63.158 0.00 0.00 0.00 4.02
379 381 0.037326 AGATCGTGGATGTTGCGTGT 60.037 50.000 0.00 0.00 0.00 4.49
393 395 3.926616 AGGTTACACAAGTGGAAGATCG 58.073 45.455 5.08 0.00 33.36 3.69
416 418 3.918328 ATCCGGTCCTGGTTCCCGT 62.918 63.158 16.63 2.10 40.10 5.28
441 443 4.537751 TCTCTCGGTATGTCTCAGGAAAT 58.462 43.478 0.00 0.00 0.00 2.17
446 448 3.885901 TCCAATCTCTCGGTATGTCTCAG 59.114 47.826 0.00 0.00 0.00 3.35
459 461 1.727062 ATGCCCGATCTCCAATCTCT 58.273 50.000 0.00 0.00 0.00 3.10
460 462 2.149578 CAATGCCCGATCTCCAATCTC 58.850 52.381 0.00 0.00 0.00 2.75
467 469 1.160137 GGTATGCAATGCCCGATCTC 58.840 55.000 1.53 0.00 44.14 2.75
477 479 1.280710 TCACGAACCTGGGTATGCAAT 59.719 47.619 0.00 0.00 0.00 3.56
503 505 6.648725 AGTAACTACGTTGATGCTCAATTC 57.351 37.500 3.44 0.00 38.79 2.17
592 1275 0.894184 TTCCTCGTCTCCTCAGCGTT 60.894 55.000 0.00 0.00 0.00 4.84
600 1283 1.135228 GTCTTGAGCTTCCTCGTCTCC 60.135 57.143 0.00 0.00 41.13 3.71
601 1284 1.135228 GGTCTTGAGCTTCCTCGTCTC 60.135 57.143 0.00 0.00 41.13 3.36
636 1319 9.618890 TTGTTCCTCTATCTTGATTTTGATAGG 57.381 33.333 9.28 0.00 41.25 2.57
669 1352 4.456253 TCGACGCGCTTCTCGACC 62.456 66.667 14.51 0.00 41.67 4.79
672 1355 2.940007 GTCTCGACGCGCTTCTCG 60.940 66.667 12.41 8.51 42.12 4.04
788 1483 2.561373 GTTGGTTACTGCCGCTGC 59.439 61.111 0.00 0.00 38.26 5.25
793 1488 1.500512 TTCGTGCGTTGGTTACTGCC 61.501 55.000 0.00 0.00 0.00 4.85
829 1527 2.504519 GGGAGGAATTCGGGGTCG 59.495 66.667 0.00 0.00 37.82 4.79
909 1612 1.598130 GCTTGGGCGTCTGTGTCTT 60.598 57.895 0.00 0.00 0.00 3.01
1510 2222 3.695830 ATTCTCCACGGAGCAGTTAAA 57.304 42.857 8.31 0.00 41.71 1.52
1513 2225 2.301870 TGTTATTCTCCACGGAGCAGTT 59.698 45.455 8.31 0.00 41.71 3.16
1514 2226 1.899814 TGTTATTCTCCACGGAGCAGT 59.100 47.619 8.31 0.00 41.71 4.40
1515 2227 2.672961 TGTTATTCTCCACGGAGCAG 57.327 50.000 8.31 0.00 41.71 4.24
1516 2228 2.301870 ACTTGTTATTCTCCACGGAGCA 59.698 45.455 8.31 0.00 41.71 4.26
1517 2229 2.973945 ACTTGTTATTCTCCACGGAGC 58.026 47.619 8.31 0.00 41.71 4.70
1518 2230 3.684788 CCAACTTGTTATTCTCCACGGAG 59.315 47.826 6.77 6.77 43.21 4.63
1519 2231 3.071892 ACCAACTTGTTATTCTCCACGGA 59.928 43.478 0.00 0.00 0.00 4.69
1520 2232 3.408634 ACCAACTTGTTATTCTCCACGG 58.591 45.455 0.00 0.00 0.00 4.94
1521 2233 5.238650 AGAAACCAACTTGTTATTCTCCACG 59.761 40.000 0.00 0.00 0.00 4.94
1522 2234 6.635030 AGAAACCAACTTGTTATTCTCCAC 57.365 37.500 0.00 0.00 0.00 4.02
1523 2235 7.038154 CAAGAAACCAACTTGTTATTCTCCA 57.962 36.000 0.00 0.00 39.57 3.86
1540 2252 4.112634 GGCACCAAAGAAGAACAAGAAAC 58.887 43.478 0.00 0.00 0.00 2.78
1541 2253 4.385358 GGCACCAAAGAAGAACAAGAAA 57.615 40.909 0.00 0.00 0.00 2.52
1605 2317 0.108662 CCGCAAGAAGCCCCAATTTC 60.109 55.000 0.00 0.00 41.38 2.17
1651 2363 4.568072 TTCTTGAGCCCTAATAGCACAA 57.432 40.909 0.00 0.00 38.27 3.33
1655 2367 4.214332 CCGAAATTCTTGAGCCCTAATAGC 59.786 45.833 0.00 0.00 0.00 2.97
1657 2369 5.367945 ACCGAAATTCTTGAGCCCTAATA 57.632 39.130 0.00 0.00 0.00 0.98
1727 2442 1.001406 AGACAAGAGGAAACAGAGCGG 59.999 52.381 0.00 0.00 0.00 5.52
1741 2456 4.398358 AGCCATTCATCATCACAAGACAAG 59.602 41.667 0.00 0.00 0.00 3.16
1761 2476 1.742761 TTAGCTGCATGAGTTGAGCC 58.257 50.000 1.02 0.00 32.29 4.70
1785 2500 8.385111 CAGGCAAGCAAACAAGATTTATATTTG 58.615 33.333 0.00 0.00 34.17 2.32
1786 2501 7.550196 CCAGGCAAGCAAACAAGATTTATATTT 59.450 33.333 0.00 0.00 0.00 1.40
1787 2502 7.043565 CCAGGCAAGCAAACAAGATTTATATT 58.956 34.615 0.00 0.00 0.00 1.28
1788 2503 6.576185 CCAGGCAAGCAAACAAGATTTATAT 58.424 36.000 0.00 0.00 0.00 0.86
1789 2504 5.624281 GCCAGGCAAGCAAACAAGATTTATA 60.624 40.000 6.55 0.00 0.00 0.98
1790 2505 4.824289 CCAGGCAAGCAAACAAGATTTAT 58.176 39.130 0.00 0.00 0.00 1.40
1791 2506 3.554752 GCCAGGCAAGCAAACAAGATTTA 60.555 43.478 6.55 0.00 0.00 1.40
1792 2507 2.807837 GCCAGGCAAGCAAACAAGATTT 60.808 45.455 6.55 0.00 0.00 2.17
1793 2508 1.270465 GCCAGGCAAGCAAACAAGATT 60.270 47.619 6.55 0.00 0.00 2.40
1794 2509 0.319405 GCCAGGCAAGCAAACAAGAT 59.681 50.000 6.55 0.00 0.00 2.40
1795 2510 1.741525 GCCAGGCAAGCAAACAAGA 59.258 52.632 6.55 0.00 0.00 3.02
1796 2511 1.301165 GGCCAGGCAAGCAAACAAG 60.301 57.895 15.19 0.00 0.00 3.16
1865 2581 8.358148 GGATTCTCCACGATATGTTAAGTCTTA 58.642 37.037 0.00 0.00 36.28 2.10
1873 2589 3.045634 TGGGGATTCTCCACGATATGTT 58.954 45.455 0.00 0.00 45.00 2.71
1895 2611 4.161565 AGCCCAATTGTGATAGTTAGTCGA 59.838 41.667 4.43 0.00 0.00 4.20
1896 2612 4.442706 AGCCCAATTGTGATAGTTAGTCG 58.557 43.478 4.43 0.00 0.00 4.18
1912 2628 2.576191 AGTGCATACTCCTTAAGCCCAA 59.424 45.455 0.00 0.00 28.79 4.12
1937 2653 0.101399 CTGCTTGAGACGCGGATACT 59.899 55.000 12.47 3.86 35.81 2.12
1938 2654 0.872021 CCTGCTTGAGACGCGGATAC 60.872 60.000 12.47 0.00 35.81 2.24
1943 2659 3.485431 CAGCCTGCTTGAGACGCG 61.485 66.667 3.53 3.53 0.00 6.01
1970 2686 5.295540 GGATACTGGAGCTCTTAGCAAAAAG 59.704 44.000 14.64 0.84 45.56 2.27
1983 2699 2.157738 GCAATCATGGGATACTGGAGC 58.842 52.381 0.00 0.00 32.09 4.70
1987 2703 6.150641 CCTTCTTATGCAATCATGGGATACTG 59.849 42.308 0.00 0.00 34.22 2.74
1993 2709 4.261909 GCTTCCTTCTTATGCAATCATGGG 60.262 45.833 0.00 0.00 34.22 4.00
2002 2718 2.947652 TCAGCATGCTTCCTTCTTATGC 59.052 45.455 19.98 0.00 43.23 3.14
2020 2736 9.170734 TCTTTCTAGACATTTCCAATCAATCAG 57.829 33.333 0.00 0.00 0.00 2.90
2052 2768 4.026052 AGCAAATCCTAATTCAACAGGGG 58.974 43.478 0.00 0.00 32.40 4.79
2057 2773 3.489229 GCCCGAGCAAATCCTAATTCAAC 60.489 47.826 0.00 0.00 39.53 3.18
2067 2783 0.178068 TCTACAGGCCCGAGCAAATC 59.822 55.000 0.00 0.00 42.56 2.17
2076 2792 0.820891 TCGGACGTATCTACAGGCCC 60.821 60.000 0.00 0.00 0.00 5.80
2082 2798 5.338365 ACAATGTTCTTCGGACGTATCTAC 58.662 41.667 0.00 0.00 0.00 2.59
2093 2809 5.204833 CACTTGTACCAACAATGTTCTTCG 58.795 41.667 0.00 0.00 44.43 3.79
2111 2827 1.197721 GAGTTCAACGGATGGCACTTG 59.802 52.381 0.00 0.00 0.00 3.16
2123 2839 7.492994 AGAAGAAATATTAGGCTCGAGTTCAAC 59.507 37.037 15.13 5.63 0.00 3.18
2147 2863 5.654901 ATGTATACTCTCCTGGACAGAGA 57.345 43.478 17.18 2.09 40.02 3.10
2173 2889 6.374894 CCCCTAAATACATCACGTTTGGTTAA 59.625 38.462 0.00 0.00 0.00 2.01
2175 2891 4.703093 CCCCTAAATACATCACGTTTGGTT 59.297 41.667 0.00 0.00 0.00 3.67
2177 2893 4.095782 CACCCCTAAATACATCACGTTTGG 59.904 45.833 0.00 0.00 0.00 3.28
2179 2895 4.698304 CACACCCCTAAATACATCACGTTT 59.302 41.667 0.00 0.00 0.00 3.60
2182 2898 3.869065 ACACACCCCTAAATACATCACG 58.131 45.455 0.00 0.00 0.00 4.35
2183 2899 5.099042 AGACACACCCCTAAATACATCAC 57.901 43.478 0.00 0.00 0.00 3.06
2184 2900 7.256190 GCTATAGACACACCCCTAAATACATCA 60.256 40.741 3.21 0.00 0.00 3.07
2185 2901 7.038941 AGCTATAGACACACCCCTAAATACATC 60.039 40.741 3.21 0.00 0.00 3.06
2186 2902 6.787957 AGCTATAGACACACCCCTAAATACAT 59.212 38.462 3.21 0.00 0.00 2.29
2187 2903 6.141083 AGCTATAGACACACCCCTAAATACA 58.859 40.000 3.21 0.00 0.00 2.29
2229 3225 7.244192 GCTACCAATGTTGACTGAGAAATAAC 58.756 38.462 0.00 0.00 0.00 1.89
2250 3246 2.703007 AGGATCTTCACAGGATGGCTAC 59.297 50.000 0.00 0.00 43.62 3.58
2270 3266 2.877168 GCAACTGCAATAGGGATGAGAG 59.123 50.000 0.00 0.00 41.59 3.20
2285 3281 6.580041 GTCTTAACATTGAGATTGTGCAACTG 59.420 38.462 0.00 0.00 38.04 3.16
2305 3301 8.780249 GTCACAGCTAAAAATAGTTTGGTCTTA 58.220 33.333 0.00 0.00 0.00 2.10
2343 3339 7.908827 TTCACTAAACGGTATTGCTATTTCA 57.091 32.000 0.00 0.00 0.00 2.69
2354 3350 3.565063 GCCCTTTGTTTCACTAAACGGTA 59.435 43.478 0.00 0.00 46.63 4.02
2357 3353 3.701532 TGCCCTTTGTTTCACTAAACG 57.298 42.857 0.00 0.00 46.63 3.60
2420 3416 8.522830 CAGATGTAGAAATGGGTAAAACATTGT 58.477 33.333 0.00 0.00 38.47 2.71
2421 3417 8.522830 ACAGATGTAGAAATGGGTAAAACATTG 58.477 33.333 0.00 0.00 38.47 2.82
2450 3446 6.735130 ACTTACTTTCAGCAATGTTAACCAC 58.265 36.000 2.48 0.00 0.00 4.16
2550 3546 6.532365 TGCCAAACGGTGATTTTAATTTTC 57.468 33.333 0.00 0.00 0.00 2.29
2556 3552 4.386867 TGTTTGCCAAACGGTGATTTTA 57.613 36.364 15.06 0.00 44.28 1.52
2591 3587 8.840321 AGATGGGATTCGTGTAATATTTGAAAG 58.160 33.333 0.00 0.00 0.00 2.62
2608 3604 6.058183 GCACTTGTGAGTATAAGATGGGATT 58.942 40.000 4.79 0.00 33.90 3.01
2611 3607 4.769688 TGCACTTGTGAGTATAAGATGGG 58.230 43.478 4.79 0.00 33.90 4.00
2635 3632 9.575868 TTACCAATCTACAGGACATAACAAAAA 57.424 29.630 0.00 0.00 0.00 1.94
2838 3835 4.857588 ACGACACGAGTATCTTTGTGATTC 59.142 41.667 0.00 0.00 36.65 2.52
3000 3998 6.532988 AAGGGAGTGTTAAACTAGCTAGAG 57.467 41.667 27.45 4.64 40.07 2.43
3003 4001 6.675413 TGAAAGGGAGTGTTAAACTAGCTA 57.325 37.500 0.00 0.00 40.07 3.32
3013 4011 5.888982 TTAGAGACTTGAAAGGGAGTGTT 57.111 39.130 0.00 0.00 0.00 3.32
3015 4013 5.177696 CGTTTTAGAGACTTGAAAGGGAGTG 59.822 44.000 0.00 0.00 0.00 3.51
3038 4036 7.447853 ACTCCCTCTGTAAACTAATATAGGACG 59.552 40.741 0.00 0.00 0.00 4.79
3109 4107 2.627699 ACTGTTGGGAAAACGCATTCAT 59.372 40.909 3.56 0.00 0.00 2.57
3143 4141 4.141846 TGCTCATCAGAACCCAGAAGTATC 60.142 45.833 0.00 0.00 0.00 2.24
3153 4151 3.614092 TGAAGGAATGCTCATCAGAACC 58.386 45.455 0.00 0.00 0.00 3.62
3158 4156 3.276857 GAAGCTGAAGGAATGCTCATCA 58.723 45.455 0.00 0.00 35.85 3.07
3418 4416 8.375506 TCTTTACAGCTTAAGAGGATTTCTTCA 58.624 33.333 6.67 0.00 42.54 3.02
3476 4474 5.263599 TGAACATAATTCTGGCCTTGATGT 58.736 37.500 3.32 2.42 0.00 3.06
3529 4527 0.870393 CGACAGCTGACAAACATGCT 59.130 50.000 23.35 0.00 34.90 3.79
3535 4533 2.995939 CTCTAATGCGACAGCTGACAAA 59.004 45.455 23.35 5.42 45.42 2.83
3586 4584 6.073981 TGCAATAATGGCAATAGGGTAATCA 58.926 36.000 0.00 0.00 38.54 2.57
3659 4657 4.399303 GGCATCCATGTAAAGTAAGCAACT 59.601 41.667 0.00 0.00 41.49 3.16
3660 4658 4.399303 AGGCATCCATGTAAAGTAAGCAAC 59.601 41.667 0.00 0.00 0.00 4.17
3661 4659 4.599041 AGGCATCCATGTAAAGTAAGCAA 58.401 39.130 0.00 0.00 0.00 3.91
3662 4660 4.235079 AGGCATCCATGTAAAGTAAGCA 57.765 40.909 0.00 0.00 0.00 3.91
3663 4661 5.343249 CAAAGGCATCCATGTAAAGTAAGC 58.657 41.667 0.00 0.00 0.00 3.09
3664 4662 5.343249 GCAAAGGCATCCATGTAAAGTAAG 58.657 41.667 0.00 0.00 40.72 2.34
3665 4663 4.159506 GGCAAAGGCATCCATGTAAAGTAA 59.840 41.667 0.00 0.00 43.71 2.24
3666 4664 3.699038 GGCAAAGGCATCCATGTAAAGTA 59.301 43.478 0.00 0.00 43.71 2.24
3667 4665 2.497273 GGCAAAGGCATCCATGTAAAGT 59.503 45.455 0.00 0.00 43.71 2.66
3752 4750 7.780008 AACCATAGCAAAAACAAAAGTTACC 57.220 32.000 0.00 0.00 0.00 2.85
3977 4998 6.657541 GCCGAGGGATGAATTACCATAAAATA 59.342 38.462 0.00 0.00 0.00 1.40
3978 4999 5.476945 GCCGAGGGATGAATTACCATAAAAT 59.523 40.000 0.00 0.00 0.00 1.82
3979 5000 4.825085 GCCGAGGGATGAATTACCATAAAA 59.175 41.667 0.00 0.00 0.00 1.52
3980 5001 4.141367 TGCCGAGGGATGAATTACCATAAA 60.141 41.667 0.00 0.00 0.00 1.40
3981 5002 3.392947 TGCCGAGGGATGAATTACCATAA 59.607 43.478 0.00 0.00 0.00 1.90
3982 5003 2.976185 TGCCGAGGGATGAATTACCATA 59.024 45.455 0.00 0.00 0.00 2.74
3983 5004 1.774254 TGCCGAGGGATGAATTACCAT 59.226 47.619 0.00 0.00 0.00 3.55
3984 5005 1.134220 GTGCCGAGGGATGAATTACCA 60.134 52.381 0.00 0.00 0.00 3.25
3985 5006 1.134220 TGTGCCGAGGGATGAATTACC 60.134 52.381 0.00 0.00 0.00 2.85
3986 5007 2.213499 CTGTGCCGAGGGATGAATTAC 58.787 52.381 0.00 0.00 0.00 1.89
3987 5008 1.140852 CCTGTGCCGAGGGATGAATTA 59.859 52.381 0.00 0.00 0.00 1.40
3988 5009 0.107017 CCTGTGCCGAGGGATGAATT 60.107 55.000 0.00 0.00 0.00 2.17
3989 5010 1.274703 ACCTGTGCCGAGGGATGAAT 61.275 55.000 3.31 0.00 37.45 2.57
3990 5011 1.488705 AACCTGTGCCGAGGGATGAA 61.489 55.000 3.31 0.00 37.45 2.57
3991 5012 1.899437 GAACCTGTGCCGAGGGATGA 61.899 60.000 3.31 0.00 37.45 2.92
3992 5013 1.450312 GAACCTGTGCCGAGGGATG 60.450 63.158 3.31 0.00 37.45 3.51
3993 5014 1.918293 TGAACCTGTGCCGAGGGAT 60.918 57.895 3.31 0.00 37.45 3.85
3994 5015 2.525629 TGAACCTGTGCCGAGGGA 60.526 61.111 3.31 0.00 37.45 4.20
3995 5016 2.358737 GTGAACCTGTGCCGAGGG 60.359 66.667 3.31 0.00 37.45 4.30
3996 5017 0.249120 TATGTGAACCTGTGCCGAGG 59.751 55.000 0.00 0.00 39.28 4.63
3997 5018 2.093306 TTATGTGAACCTGTGCCGAG 57.907 50.000 0.00 0.00 0.00 4.63
3998 5019 2.147958 GTTTATGTGAACCTGTGCCGA 58.852 47.619 0.00 0.00 0.00 5.54
3999 5020 1.876799 TGTTTATGTGAACCTGTGCCG 59.123 47.619 0.00 0.00 0.00 5.69
4000 5021 3.067461 TGTTGTTTATGTGAACCTGTGCC 59.933 43.478 0.00 0.00 0.00 5.01
4001 5022 4.300189 TGTTGTTTATGTGAACCTGTGC 57.700 40.909 0.00 0.00 0.00 4.57
4103 5124 2.189594 AGTGTGCAGCTTCAAGCATA 57.810 45.000 13.10 0.00 45.56 3.14
4193 5421 5.887754 ACCCAGGTCATAAACTACACAAAT 58.112 37.500 0.00 0.00 0.00 2.32
4221 5449 6.584184 TGCAAAAATAAATGGTGTACACATCG 59.416 34.615 26.51 3.73 0.00 3.84
4265 5495 4.718940 AAGTATGCGAAATGGGGAAAAG 57.281 40.909 0.00 0.00 0.00 2.27
4327 5558 1.364901 CAAGGTTGGCCAGCACAAG 59.635 57.895 22.07 4.12 37.19 3.16
4368 5599 0.322975 CCAAGGACAGAGTGGAGGTG 59.677 60.000 0.00 0.00 34.05 4.00
4392 5623 4.853924 TTGCAAAGATGTTCCTTCCTTC 57.146 40.909 0.00 0.00 0.00 3.46
4422 5653 4.853924 TTTCAAACATTTCAGGAGGAGC 57.146 40.909 0.00 0.00 0.00 4.70
4552 5783 5.574970 AGGATCAAAAGGAGTCAAGAGTT 57.425 39.130 0.00 0.00 0.00 3.01
4557 5788 4.350816 TCTGGAAGGATCAAAAGGAGTCAA 59.649 41.667 0.00 0.00 0.00 3.18
4558 5789 3.909995 TCTGGAAGGATCAAAAGGAGTCA 59.090 43.478 0.00 0.00 0.00 3.41
4716 5948 4.806342 AAGTGGATGTTGAACGTTACAC 57.194 40.909 0.00 14.48 0.00 2.90
4756 5988 1.550072 TGCAGCAAAGGAAAATAGGCC 59.450 47.619 0.00 0.00 0.00 5.19
5080 6312 7.067615 TGAGACTAGAAGGTGAACATCATAGTC 59.932 40.741 0.00 12.69 38.64 2.59
5324 6674 2.746904 TGTCATTTGTGATAGGCCAACG 59.253 45.455 5.01 0.00 0.00 4.10
5401 6751 0.957395 AAGACCATTGCTGTGCCTCG 60.957 55.000 0.00 0.00 0.00 4.63
5564 6914 3.316029 CACTTCTCAAATCACTGTTGCCA 59.684 43.478 0.00 0.00 0.00 4.92
5851 7204 2.818130 TGCCAGCCAAGAAAAATCAC 57.182 45.000 0.00 0.00 0.00 3.06
5860 7213 6.397272 TCTTTACAAAAATATGCCAGCCAAG 58.603 36.000 0.00 0.00 0.00 3.61
5886 7239 7.919385 AACCTATTTCAAAGGGATGCAATAT 57.081 32.000 0.00 0.00 38.54 1.28
5930 7283 4.037565 GCCAATGGTTTAACAGCCTATACC 59.962 45.833 0.00 0.00 0.00 2.73
5980 7333 2.229675 TCTTCCAGTGCATGCTATCG 57.770 50.000 20.33 4.66 0.00 2.92
5984 7337 2.803030 AAGATCTTCCAGTGCATGCT 57.197 45.000 20.33 0.00 0.00 3.79
6023 7376 5.705441 ACATCACAATTCCACGAACAGTTAT 59.295 36.000 0.00 0.00 0.00 1.89
6097 7450 4.095185 AGTGAAGCAGATACTACGACAGAC 59.905 45.833 0.00 0.00 0.00 3.51
6099 7452 4.496673 GGAGTGAAGCAGATACTACGACAG 60.497 50.000 0.00 0.00 0.00 3.51
6139 7492 1.147191 AGCATCAGGCCCATTCATCAT 59.853 47.619 0.00 0.00 46.50 2.45
6140 7493 0.554305 AGCATCAGGCCCATTCATCA 59.446 50.000 0.00 0.00 46.50 3.07
6143 7496 2.025037 ACTTAAGCATCAGGCCCATTCA 60.025 45.455 0.00 0.00 46.50 2.57
6152 7505 7.897575 ACTGAACTCTAAACTTAAGCATCAG 57.102 36.000 1.29 7.43 35.26 2.90
6153 7506 8.559536 CAAACTGAACTCTAAACTTAAGCATCA 58.440 33.333 1.29 0.00 0.00 3.07
6242 7600 1.466558 GCAAGCCTGAGACAGCTTTAC 59.533 52.381 0.00 0.00 30.12 2.01
6338 7704 4.517285 ACCATACGAGCAAGTTCATTCAT 58.483 39.130 0.00 0.00 0.00 2.57
6404 7770 4.955450 ACCTAAAACCGTTTAAAGGTGGTT 59.045 37.500 21.73 11.70 46.26 3.67
6430 7796 2.878406 TCAAAGTGACTTAACAGGCTGC 59.122 45.455 15.89 0.00 0.00 5.25
6528 7894 7.065085 CCGACAATTAGTTGAGACAAGATCAAT 59.935 37.037 4.81 0.00 38.81 2.57
6552 7918 3.241067 TGTACAGTTAAGCTTAGGCCG 57.759 47.619 6.24 0.02 39.73 6.13
6576 7942 5.736813 ACCGCCACAAGAAGTAATACATAA 58.263 37.500 0.00 0.00 0.00 1.90
6585 7951 2.552315 CACAAATACCGCCACAAGAAGT 59.448 45.455 0.00 0.00 0.00 3.01
6595 7961 4.002906 TGGGATATCTCACAAATACCGC 57.997 45.455 0.00 0.00 29.74 5.68
6664 8030 7.118723 AGGTAAAGGTGCAATGATCTTTCATA 58.881 34.615 0.00 0.00 41.83 2.15
6728 8094 9.612620 GCAAAATAGAAGGGACGAATAATATTG 57.387 33.333 0.00 0.00 0.00 1.90
6732 8098 6.828785 ACAGCAAAATAGAAGGGACGAATAAT 59.171 34.615 0.00 0.00 0.00 1.28
6801 8167 9.444600 AGTAACACCGACATAACATTTTTCTAT 57.555 29.630 0.00 0.00 0.00 1.98
7019 8385 1.550976 AGAATCGGTGAGGTCTTGTCC 59.449 52.381 0.00 0.00 0.00 4.02
7020 8386 2.231478 TCAGAATCGGTGAGGTCTTGTC 59.769 50.000 0.00 0.00 0.00 3.18
7320 8687 2.069273 GACAGATCCACAGAAACACGG 58.931 52.381 0.00 0.00 0.00 4.94
7347 8714 0.040958 GTGCCTTTTCACTCTGTGCG 60.041 55.000 0.00 0.00 34.29 5.34
7350 8717 2.486191 CCTCTGTGCCTTTTCACTCTGT 60.486 50.000 0.00 0.00 37.81 3.41
7465 8832 9.722056 GCTTTACCATGTTTCAATGTAGATAAG 57.278 33.333 0.00 0.00 0.00 1.73
7742 9109 4.884164 GGTCATCTATTTTGGAACAGAGGG 59.116 45.833 0.00 0.00 42.39 4.30
7743 9110 4.884164 GGGTCATCTATTTTGGAACAGAGG 59.116 45.833 0.00 0.00 42.39 3.69
7744 9111 5.500234 TGGGTCATCTATTTTGGAACAGAG 58.500 41.667 0.00 0.00 42.39 3.35
7745 9112 5.512942 TGGGTCATCTATTTTGGAACAGA 57.487 39.130 0.00 0.00 42.39 3.41
7746 9113 5.711976 AGTTGGGTCATCTATTTTGGAACAG 59.288 40.000 0.00 0.00 42.39 3.16
7747 9114 5.640147 AGTTGGGTCATCTATTTTGGAACA 58.360 37.500 0.00 0.00 0.00 3.18
7748 9115 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
7749 9116 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
7750 9117 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
7751 9118 9.408648 AGTATAAAGTTGGGTCATCTATTTTGG 57.591 33.333 0.00 0.00 0.00 3.28
7773 9140 9.716531 GACCCAACTTTGTACTAAAGTTAGTAT 57.283 33.333 23.56 15.20 45.57 2.12
7774 9141 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
7775 9142 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
7776 9143 8.617290 ATGACCCAACTTTGTACTAAAGTTAG 57.383 34.615 23.56 20.79 45.57 2.34
7777 9144 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
7779 9146 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
7780 9147 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
7781 9148 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
7782 9149 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
7783 9150 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
7784 9151 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
7785 9152 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
7786 9153 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
7787 9154 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
7788 9155 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
7789 9156 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
7790 9157 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
7791 9158 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
7792 9159 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
7793 9160 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
7794 9161 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
7795 9162 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
7796 9163 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
7797 9164 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
7798 9165 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
7799 9166 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
7800 9167 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
7801 9168 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
7802 9169 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
7803 9170 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
7804 9171 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
7805 9172 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
7806 9173 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
7807 9174 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
7808 9175 0.115745 AAGGTACTCCCTCCGTTCCA 59.884 55.000 0.00 0.00 45.47 3.53
7809 9176 0.822811 GAAGGTACTCCCTCCGTTCC 59.177 60.000 0.00 0.00 45.47 3.62
7810 9177 1.849977 AGAAGGTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 45.47 3.95
7811 9178 2.622714 GGTAGAAGGTACTCCCTCCGTT 60.623 54.545 0.00 0.00 45.47 4.44
7812 9179 1.064091 GGTAGAAGGTACTCCCTCCGT 60.064 57.143 0.00 0.00 45.47 4.69
7813 9180 1.214923 AGGTAGAAGGTACTCCCTCCG 59.785 57.143 0.00 0.00 45.47 4.63
7814 9181 3.751569 GCTAGGTAGAAGGTACTCCCTCC 60.752 56.522 0.00 0.00 45.47 4.30
7815 9182 3.117587 TGCTAGGTAGAAGGTACTCCCTC 60.118 52.174 0.00 0.00 45.47 4.30
7817 9184 3.224269 CTGCTAGGTAGAAGGTACTCCC 58.776 54.545 0.00 0.00 38.49 4.30
7818 9185 2.624364 GCTGCTAGGTAGAAGGTACTCC 59.376 54.545 0.00 0.00 38.49 3.85
7819 9186 3.558033 AGCTGCTAGGTAGAAGGTACTC 58.442 50.000 0.00 0.00 37.91 2.59
7820 9187 3.673543 AGCTGCTAGGTAGAAGGTACT 57.326 47.619 0.00 0.00 37.91 2.73
7821 9188 3.253921 GCTAGCTGCTAGGTAGAAGGTAC 59.746 52.174 31.52 12.00 46.31 3.34
7822 9189 3.117625 TGCTAGCTGCTAGGTAGAAGGTA 60.118 47.826 31.52 6.86 46.31 3.08
7823 9190 2.312390 GCTAGCTGCTAGGTAGAAGGT 58.688 52.381 31.52 2.30 46.31 3.50
7824 9191 2.311463 TGCTAGCTGCTAGGTAGAAGG 58.689 52.381 31.52 10.64 46.31 3.46
7825 9192 4.392921 TTTGCTAGCTGCTAGGTAGAAG 57.607 45.455 31.52 12.96 46.31 2.85
8039 9414 5.008980 TGACATTATGCAATCAACTCACCA 58.991 37.500 0.00 0.00 0.00 4.17
8437 9815 3.561143 AGAGGCCAGTCAGTCTATACAG 58.439 50.000 5.01 0.00 0.00 2.74
8541 9920 5.776744 AGAAAAGAAAGAATGACACCATGC 58.223 37.500 0.00 0.00 32.36 4.06
8549 9928 8.882736 GCAAAAGGAAAAGAAAAGAAAGAATGA 58.117 29.630 0.00 0.00 0.00 2.57
8593 9972 1.610522 AGGAGCACACACAAAAGATGC 59.389 47.619 0.00 0.00 36.52 3.91
8616 9995 0.041312 CAACGTGTTTTGAGAGGCGG 60.041 55.000 0.00 0.00 0.00 6.13
8911 10304 8.642020 CAAGTTGTAAGAATAGCATTTTTGCTC 58.358 33.333 3.35 0.00 45.00 4.26
9057 10575 2.229062 GCTCAAACAAAGAGGGCCTAAC 59.771 50.000 5.73 0.00 33.72 2.34
9076 10594 9.236006 ACAACAAATTCTCAAGAATATGTAGCT 57.764 29.630 5.71 0.00 43.41 3.32
9083 10601 6.899393 AGCCACAACAAATTCTCAAGAATA 57.101 33.333 5.71 0.00 43.41 1.75
9097 10757 4.523083 GGAGTATAATCCAAGCCACAACA 58.477 43.478 14.31 0.00 39.34 3.33
9116 10776 0.389948 CGTTCTTGGAACGGAGGGAG 60.390 60.000 20.56 0.00 39.73 4.30
9118 10778 4.278956 CGTTCTTGGAACGGAGGG 57.721 61.111 20.56 0.00 39.73 4.30
9123 10783 1.873698 TTTCCTCCGTTCTTGGAACG 58.126 50.000 21.12 21.12 39.29 3.95
9124 10784 3.057526 CCAATTTCCTCCGTTCTTGGAAC 60.058 47.826 0.00 0.82 39.29 3.62
9125 10785 3.153919 CCAATTTCCTCCGTTCTTGGAA 58.846 45.455 0.00 0.00 37.64 3.53
9126 10786 2.554344 CCCAATTTCCTCCGTTCTTGGA 60.554 50.000 0.00 0.00 36.14 3.53
9128 10788 1.202348 GCCCAATTTCCTCCGTTCTTG 59.798 52.381 0.00 0.00 0.00 3.02
9129 10789 1.545841 GCCCAATTTCCTCCGTTCTT 58.454 50.000 0.00 0.00 0.00 2.52
9130 10790 0.323451 GGCCCAATTTCCTCCGTTCT 60.323 55.000 0.00 0.00 0.00 3.01
9131 10791 1.654023 CGGCCCAATTTCCTCCGTTC 61.654 60.000 0.00 0.00 35.75 3.95
9132 10792 1.677633 CGGCCCAATTTCCTCCGTT 60.678 57.895 0.00 0.00 35.75 4.44
9133 10793 2.045340 CGGCCCAATTTCCTCCGT 60.045 61.111 0.00 0.00 35.75 4.69
9134 10794 2.828549 CCGGCCCAATTTCCTCCG 60.829 66.667 0.00 0.00 39.79 4.63
9187 11033 1.558294 AGGTTCCGGAATAGACCAACC 59.442 52.381 22.04 14.91 36.70 3.77
9298 11223 7.704472 ACACTCAGATTTCTATCTTAGCTTTCG 59.296 37.037 0.00 0.00 39.11 3.46
9312 11237 8.862550 AAATCTCAAACAAACACTCAGATTTC 57.137 30.769 0.00 0.00 35.25 2.17
9346 11271 2.295909 CAGAATCTCAACCCCGCAAAAA 59.704 45.455 0.00 0.00 0.00 1.94
9347 11272 1.885887 CAGAATCTCAACCCCGCAAAA 59.114 47.619 0.00 0.00 0.00 2.44
9348 11273 1.073125 TCAGAATCTCAACCCCGCAAA 59.927 47.619 0.00 0.00 0.00 3.68
9349 11274 0.690192 TCAGAATCTCAACCCCGCAA 59.310 50.000 0.00 0.00 0.00 4.85
9350 11275 0.911769 ATCAGAATCTCAACCCCGCA 59.088 50.000 0.00 0.00 0.00 5.69
9351 11276 2.044123 AATCAGAATCTCAACCCCGC 57.956 50.000 0.00 0.00 0.00 6.13
9352 11277 3.129287 CCAAAATCAGAATCTCAACCCCG 59.871 47.826 0.00 0.00 0.00 5.73
9353 11278 4.158579 GTCCAAAATCAGAATCTCAACCCC 59.841 45.833 0.00 0.00 0.00 4.95
9354 11279 4.142600 CGTCCAAAATCAGAATCTCAACCC 60.143 45.833 0.00 0.00 0.00 4.11
9355 11280 4.142600 CCGTCCAAAATCAGAATCTCAACC 60.143 45.833 0.00 0.00 0.00 3.77
9356 11281 4.142600 CCCGTCCAAAATCAGAATCTCAAC 60.143 45.833 0.00 0.00 0.00 3.18
9357 11282 4.009675 CCCGTCCAAAATCAGAATCTCAA 58.990 43.478 0.00 0.00 0.00 3.02
9358 11283 3.009033 ACCCGTCCAAAATCAGAATCTCA 59.991 43.478 0.00 0.00 0.00 3.27
9359 11284 3.610911 ACCCGTCCAAAATCAGAATCTC 58.389 45.455 0.00 0.00 0.00 2.75
9360 11285 3.721087 ACCCGTCCAAAATCAGAATCT 57.279 42.857 0.00 0.00 0.00 2.40
9361 11286 5.183228 TCTAACCCGTCCAAAATCAGAATC 58.817 41.667 0.00 0.00 0.00 2.52
9362 11287 5.174037 TCTAACCCGTCCAAAATCAGAAT 57.826 39.130 0.00 0.00 0.00 2.40
9363 11288 4.627284 TCTAACCCGTCCAAAATCAGAA 57.373 40.909 0.00 0.00 0.00 3.02
9364 11289 4.627284 TTCTAACCCGTCCAAAATCAGA 57.373 40.909 0.00 0.00 0.00 3.27
9365 11290 4.335594 GGATTCTAACCCGTCCAAAATCAG 59.664 45.833 0.00 0.00 0.00 2.90
9366 11291 4.263550 TGGATTCTAACCCGTCCAAAATCA 60.264 41.667 0.00 0.00 37.78 2.57
9367 11292 4.266714 TGGATTCTAACCCGTCCAAAATC 58.733 43.478 0.00 0.00 37.78 2.17
9368 11293 4.310022 TGGATTCTAACCCGTCCAAAAT 57.690 40.909 0.00 0.00 37.78 1.82
9369 11294 3.791953 TGGATTCTAACCCGTCCAAAA 57.208 42.857 0.00 0.00 37.78 2.44
9370 11295 3.328343 TCTTGGATTCTAACCCGTCCAAA 59.672 43.478 7.07 0.00 46.69 3.28
9371 11296 2.907696 TCTTGGATTCTAACCCGTCCAA 59.092 45.455 5.66 5.66 45.68 3.53
9372 11297 2.542550 TCTTGGATTCTAACCCGTCCA 58.457 47.619 0.00 0.00 38.90 4.02
9373 11298 3.622166 TTCTTGGATTCTAACCCGTCC 57.378 47.619 0.00 0.00 0.00 4.79
9374 11299 5.024785 AGATTCTTGGATTCTAACCCGTC 57.975 43.478 0.00 0.00 0.00 4.79
9375 11300 5.437191 AAGATTCTTGGATTCTAACCCGT 57.563 39.130 0.00 0.00 0.00 5.28
9376 11301 6.759497 AAAAGATTCTTGGATTCTAACCCG 57.241 37.500 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.