Multiple sequence alignment - TraesCS1B01G182800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G182800 chr1B 100.000 2708 0 0 1 2708 329712781 329715488 0.000000e+00 5001.0
1 TraesCS1B01G182800 chr1B 87.433 939 72 17 1812 2707 11853336 11852401 0.000000e+00 1038.0
2 TraesCS1B01G182800 chr1B 86.575 946 77 19 1808 2705 157940183 157941126 0.000000e+00 998.0
3 TraesCS1B01G182800 chr1B 89.375 160 11 4 1812 1967 625567167 625567010 2.130000e-46 196.0
4 TraesCS1B01G182800 chr1A 93.966 895 41 9 820 1709 298725066 298725952 0.000000e+00 1341.0
5 TraesCS1B01G182800 chr1A 95.161 124 5 1 1688 1810 298725963 298726086 7.650000e-46 195.0
6 TraesCS1B01G182800 chr1A 85.629 167 17 5 649 808 298724916 298725082 4.640000e-38 169.0
7 TraesCS1B01G182800 chr2B 90.333 931 55 11 1811 2707 164079514 164078585 0.000000e+00 1188.0
8 TraesCS1B01G182800 chr2B 79.910 886 145 20 1835 2708 732118076 732117212 1.070000e-173 619.0
9 TraesCS1B01G182800 chr2B 81.806 720 83 23 2036 2707 602257722 602258441 6.550000e-156 560.0
10 TraesCS1B01G182800 chr2B 82.870 432 43 10 1808 2229 494376691 494377101 2.560000e-95 359.0
11 TraesCS1B01G182800 chr2B 91.406 256 12 6 2463 2708 227099910 227100165 2.580000e-90 342.0
12 TraesCS1B01G182800 chr2B 83.146 267 37 7 2 264 390912515 390912777 1.250000e-58 237.0
13 TraesCS1B01G182800 chr6D 88.340 952 50 18 1811 2708 465742230 465741286 0.000000e+00 1086.0
14 TraesCS1B01G182800 chr6D 83.966 948 90 37 1815 2708 438402983 438402044 0.000000e+00 852.0
15 TraesCS1B01G182800 chr5B 87.779 941 66 24 1812 2708 619054677 619055612 0.000000e+00 1055.0
16 TraesCS1B01G182800 chr5B 87.513 929 85 10 1811 2708 540358075 540357147 0.000000e+00 1044.0
17 TraesCS1B01G182800 chr5B 82.940 932 104 26 1813 2708 5416607 5415695 0.000000e+00 789.0
18 TraesCS1B01G182800 chr5B 82.201 427 50 14 1829 2236 443288439 443288020 7.180000e-91 344.0
19 TraesCS1B01G182800 chr7B 87.500 928 68 17 1829 2708 664958217 664959144 0.000000e+00 1027.0
20 TraesCS1B01G182800 chr7B 85.441 941 90 13 1808 2702 323757753 323758692 0.000000e+00 935.0
21 TraesCS1B01G182800 chr7B 85.764 864 76 15 1808 2637 604770881 604770031 0.000000e+00 870.0
22 TraesCS1B01G182800 chr7B 83.282 969 91 29 1808 2707 711809889 711810855 0.000000e+00 826.0
23 TraesCS1B01G182800 chr7B 82.591 965 98 28 1811 2707 711842869 711843831 0.000000e+00 787.0
24 TraesCS1B01G182800 chr7B 82.285 954 106 32 1811 2708 65149440 65150386 0.000000e+00 767.0
25 TraesCS1B01G182800 chr7B 85.692 636 77 9 1832 2457 38684427 38685058 0.000000e+00 658.0
26 TraesCS1B01G182800 chr7B 93.878 49 2 1 374 421 426336830 426336878 3.740000e-09 73.1
27 TraesCS1B01G182800 chr6B 87.191 929 71 22 1823 2708 710640065 710639142 0.000000e+00 1013.0
28 TraesCS1B01G182800 chr6B 82.185 943 104 26 1811 2705 674214326 674213400 0.000000e+00 752.0
29 TraesCS1B01G182800 chr6B 84.729 609 52 12 1808 2377 153683663 153684269 3.020000e-159 571.0
30 TraesCS1B01G182800 chr4A 85.714 966 70 27 1811 2708 739514121 739513156 0.000000e+00 957.0
31 TraesCS1B01G182800 chr3B 85.368 950 85 23 1811 2708 6580986 6580039 0.000000e+00 935.0
32 TraesCS1B01G182800 chr3B 85.951 904 93 13 1829 2708 74808098 74808991 0.000000e+00 935.0
33 TraesCS1B01G182800 chr3B 88.722 665 46 6 1811 2446 60298668 60299332 0.000000e+00 785.0
34 TraesCS1B01G182800 chr3D 88.390 267 30 1 1 266 389254541 389254275 1.210000e-83 320.0
35 TraesCS1B01G182800 chr1D 75.708 671 119 33 1055 1706 486196388 486197033 2.040000e-76 296.0
36 TraesCS1B01G182800 chr2D 86.312 263 30 5 2 261 323056138 323056397 5.710000e-72 281.0
37 TraesCS1B01G182800 chr2D 80.405 148 26 3 264 409 391804339 391804485 2.850000e-20 110.0
38 TraesCS1B01G182800 chr7A 81.538 260 29 8 1 260 618228768 618229008 2.130000e-46 196.0
39 TraesCS1B01G182800 chr5D 81.761 159 24 5 264 420 311764708 311764863 7.870000e-26 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G182800 chr1B 329712781 329715488 2707 False 5001.000000 5001 100.000000 1 2708 1 chr1B.!!$F2 2707
1 TraesCS1B01G182800 chr1B 11852401 11853336 935 True 1038.000000 1038 87.433000 1812 2707 1 chr1B.!!$R1 895
2 TraesCS1B01G182800 chr1B 157940183 157941126 943 False 998.000000 998 86.575000 1808 2705 1 chr1B.!!$F1 897
3 TraesCS1B01G182800 chr1A 298724916 298726086 1170 False 568.333333 1341 91.585333 649 1810 3 chr1A.!!$F1 1161
4 TraesCS1B01G182800 chr2B 164078585 164079514 929 True 1188.000000 1188 90.333000 1811 2707 1 chr2B.!!$R1 896
5 TraesCS1B01G182800 chr2B 732117212 732118076 864 True 619.000000 619 79.910000 1835 2708 1 chr2B.!!$R2 873
6 TraesCS1B01G182800 chr2B 602257722 602258441 719 False 560.000000 560 81.806000 2036 2707 1 chr2B.!!$F4 671
7 TraesCS1B01G182800 chr6D 465741286 465742230 944 True 1086.000000 1086 88.340000 1811 2708 1 chr6D.!!$R2 897
8 TraesCS1B01G182800 chr6D 438402044 438402983 939 True 852.000000 852 83.966000 1815 2708 1 chr6D.!!$R1 893
9 TraesCS1B01G182800 chr5B 619054677 619055612 935 False 1055.000000 1055 87.779000 1812 2708 1 chr5B.!!$F1 896
10 TraesCS1B01G182800 chr5B 540357147 540358075 928 True 1044.000000 1044 87.513000 1811 2708 1 chr5B.!!$R3 897
11 TraesCS1B01G182800 chr5B 5415695 5416607 912 True 789.000000 789 82.940000 1813 2708 1 chr5B.!!$R1 895
12 TraesCS1B01G182800 chr7B 664958217 664959144 927 False 1027.000000 1027 87.500000 1829 2708 1 chr7B.!!$F5 879
13 TraesCS1B01G182800 chr7B 323757753 323758692 939 False 935.000000 935 85.441000 1808 2702 1 chr7B.!!$F3 894
14 TraesCS1B01G182800 chr7B 604770031 604770881 850 True 870.000000 870 85.764000 1808 2637 1 chr7B.!!$R1 829
15 TraesCS1B01G182800 chr7B 711809889 711810855 966 False 826.000000 826 83.282000 1808 2707 1 chr7B.!!$F6 899
16 TraesCS1B01G182800 chr7B 711842869 711843831 962 False 787.000000 787 82.591000 1811 2707 1 chr7B.!!$F7 896
17 TraesCS1B01G182800 chr7B 65149440 65150386 946 False 767.000000 767 82.285000 1811 2708 1 chr7B.!!$F2 897
18 TraesCS1B01G182800 chr7B 38684427 38685058 631 False 658.000000 658 85.692000 1832 2457 1 chr7B.!!$F1 625
19 TraesCS1B01G182800 chr6B 710639142 710640065 923 True 1013.000000 1013 87.191000 1823 2708 1 chr6B.!!$R2 885
20 TraesCS1B01G182800 chr6B 674213400 674214326 926 True 752.000000 752 82.185000 1811 2705 1 chr6B.!!$R1 894
21 TraesCS1B01G182800 chr6B 153683663 153684269 606 False 571.000000 571 84.729000 1808 2377 1 chr6B.!!$F1 569
22 TraesCS1B01G182800 chr4A 739513156 739514121 965 True 957.000000 957 85.714000 1811 2708 1 chr4A.!!$R1 897
23 TraesCS1B01G182800 chr3B 6580039 6580986 947 True 935.000000 935 85.368000 1811 2708 1 chr3B.!!$R1 897
24 TraesCS1B01G182800 chr3B 74808098 74808991 893 False 935.000000 935 85.951000 1829 2708 1 chr3B.!!$F2 879
25 TraesCS1B01G182800 chr3B 60298668 60299332 664 False 785.000000 785 88.722000 1811 2446 1 chr3B.!!$F1 635
26 TraesCS1B01G182800 chr1D 486196388 486197033 645 False 296.000000 296 75.708000 1055 1706 1 chr1D.!!$F1 651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 224 0.035458 AAAGAGAGCAACTCCCGTGG 59.965 55.0 7.2 0.0 45.96 4.94 F
561 562 0.094730 GAGAAAATTCGCCCGTCGTG 59.905 55.0 0.0 0.0 39.67 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1141 1154 0.110644 GAAAGGACTTGCTTCGCGTG 60.111 55.0 5.77 1.17 0.00 5.34 R
2118 2265 0.620556 GAGGCCTCATCCTGAACCAA 59.379 55.0 28.43 0.00 36.38 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.063510 CAAGATCTGGAAGGAAGCACA 57.936 47.619 0.00 0.00 0.00 4.57
28 29 3.008330 CAAGATCTGGAAGGAAGCACAG 58.992 50.000 0.00 0.00 0.00 3.66
29 30 2.544721 AGATCTGGAAGGAAGCACAGA 58.455 47.619 0.00 0.00 43.33 3.41
31 32 3.557228 ATCTGGAAGGAAGCACAGATC 57.443 47.619 0.00 0.00 44.86 2.75
32 33 2.544721 TCTGGAAGGAAGCACAGATCT 58.455 47.619 0.00 0.00 35.24 2.75
33 34 2.235650 TCTGGAAGGAAGCACAGATCTG 59.764 50.000 21.37 21.37 35.24 2.90
34 35 1.280133 TGGAAGGAAGCACAGATCTGG 59.720 52.381 26.08 15.76 34.19 3.86
35 36 1.377536 GAAGGAAGCACAGATCTGGC 58.622 55.000 26.08 23.59 34.19 4.85
36 37 0.990374 AAGGAAGCACAGATCTGGCT 59.010 50.000 26.08 25.21 38.25 4.75
37 38 1.871418 AGGAAGCACAGATCTGGCTA 58.129 50.000 28.06 0.00 36.55 3.93
38 39 1.484240 AGGAAGCACAGATCTGGCTAC 59.516 52.381 28.06 23.98 36.55 3.58
39 40 1.474143 GGAAGCACAGATCTGGCTACC 60.474 57.143 28.06 23.03 36.55 3.18
40 41 1.208052 GAAGCACAGATCTGGCTACCA 59.792 52.381 28.06 0.00 36.55 3.25
49 50 4.461119 TGGCTACCAGGACCAGAG 57.539 61.111 0.00 0.00 0.00 3.35
50 51 1.990060 TGGCTACCAGGACCAGAGC 60.990 63.158 0.00 0.00 0.00 4.09
51 52 1.990060 GGCTACCAGGACCAGAGCA 60.990 63.158 0.00 0.00 34.76 4.26
52 53 1.519719 GCTACCAGGACCAGAGCAG 59.480 63.158 0.00 0.00 33.26 4.24
53 54 1.519719 CTACCAGGACCAGAGCAGC 59.480 63.158 0.00 0.00 0.00 5.25
54 55 1.229177 TACCAGGACCAGAGCAGCA 60.229 57.895 0.00 0.00 0.00 4.41
55 56 1.260538 TACCAGGACCAGAGCAGCAG 61.261 60.000 0.00 0.00 0.00 4.24
56 57 2.268280 CAGGACCAGAGCAGCAGG 59.732 66.667 0.00 0.00 0.00 4.85
57 58 3.007920 AGGACCAGAGCAGCAGGG 61.008 66.667 0.00 0.00 0.00 4.45
58 59 4.106925 GGACCAGAGCAGCAGGGG 62.107 72.222 0.00 0.00 0.00 4.79
59 60 4.792804 GACCAGAGCAGCAGGGGC 62.793 72.222 0.00 0.00 41.61 5.80
80 81 3.228017 GACGGGCCTAGGGAGCTC 61.228 72.222 11.72 4.71 0.00 4.09
81 82 4.075793 ACGGGCCTAGGGAGCTCA 62.076 66.667 17.19 0.00 0.00 4.26
82 83 2.764128 CGGGCCTAGGGAGCTCAA 60.764 66.667 17.19 0.00 0.00 3.02
83 84 2.801631 CGGGCCTAGGGAGCTCAAG 61.802 68.421 17.19 9.39 0.00 3.02
84 85 2.447714 GGGCCTAGGGAGCTCAAGG 61.448 68.421 17.19 18.63 0.00 3.61
85 86 2.447714 GGCCTAGGGAGCTCAAGGG 61.448 68.421 23.10 16.47 0.00 3.95
86 87 2.447714 GCCTAGGGAGCTCAAGGGG 61.448 68.421 23.10 16.75 0.00 4.79
87 88 1.768077 CCTAGGGAGCTCAAGGGGG 60.768 68.421 17.19 6.81 0.00 5.40
88 89 2.366972 TAGGGAGCTCAAGGGGGC 60.367 66.667 17.19 0.00 0.00 5.80
110 111 2.665000 CTTCCGGAGCTTGCAGGA 59.335 61.111 3.34 0.00 0.00 3.86
111 112 1.449246 CTTCCGGAGCTTGCAGGAG 60.449 63.158 3.34 0.00 33.69 3.69
112 113 1.892819 CTTCCGGAGCTTGCAGGAGA 61.893 60.000 3.34 0.00 33.69 3.71
113 114 2.125350 CCGGAGCTTGCAGGAGAC 60.125 66.667 0.00 0.00 0.00 3.36
114 115 2.507992 CGGAGCTTGCAGGAGACG 60.508 66.667 0.00 0.00 0.00 4.18
115 116 2.973899 GGAGCTTGCAGGAGACGA 59.026 61.111 0.00 0.00 0.00 4.20
116 117 1.293498 GGAGCTTGCAGGAGACGAA 59.707 57.895 0.00 0.00 0.00 3.85
117 118 0.739112 GGAGCTTGCAGGAGACGAAG 60.739 60.000 0.00 0.00 0.00 3.79
118 119 0.244994 GAGCTTGCAGGAGACGAAGA 59.755 55.000 0.00 0.00 0.00 2.87
119 120 0.901124 AGCTTGCAGGAGACGAAGAT 59.099 50.000 0.00 0.00 0.00 2.40
120 121 1.005340 GCTTGCAGGAGACGAAGATG 58.995 55.000 0.00 0.00 0.00 2.90
121 122 1.005340 CTTGCAGGAGACGAAGATGC 58.995 55.000 0.00 0.00 37.40 3.91
122 123 0.321346 TTGCAGGAGACGAAGATGCA 59.679 50.000 0.00 0.00 44.58 3.96
123 124 0.390340 TGCAGGAGACGAAGATGCAC 60.390 55.000 0.00 0.00 41.65 4.57
124 125 1.086634 GCAGGAGACGAAGATGCACC 61.087 60.000 0.00 0.00 36.88 5.01
125 126 0.803768 CAGGAGACGAAGATGCACCG 60.804 60.000 0.00 0.00 0.00 4.94
126 127 1.519455 GGAGACGAAGATGCACCGG 60.519 63.158 0.00 0.00 0.00 5.28
127 128 1.519455 GAGACGAAGATGCACCGGG 60.519 63.158 6.32 0.00 0.00 5.73
128 129 1.945354 GAGACGAAGATGCACCGGGA 61.945 60.000 6.32 0.00 0.00 5.14
129 130 1.144057 GACGAAGATGCACCGGGAT 59.856 57.895 6.32 0.00 0.00 3.85
130 131 1.153369 ACGAAGATGCACCGGGATG 60.153 57.895 6.32 0.00 0.00 3.51
131 132 1.889105 CGAAGATGCACCGGGATGG 60.889 63.158 6.32 0.00 46.41 3.51
132 133 1.526917 GAAGATGCACCGGGATGGG 60.527 63.158 6.32 0.00 44.64 4.00
133 134 2.270874 GAAGATGCACCGGGATGGGT 62.271 60.000 6.32 0.00 44.64 4.51
149 150 4.494515 GTGACCAACCAAGGGACC 57.505 61.111 0.00 0.00 0.00 4.46
150 151 1.599797 GTGACCAACCAAGGGACCG 60.600 63.158 0.00 0.00 0.00 4.79
151 152 2.671963 GACCAACCAAGGGACCGC 60.672 66.667 0.00 0.00 0.00 5.68
152 153 3.485346 GACCAACCAAGGGACCGCA 62.485 63.158 0.00 0.00 0.00 5.69
153 154 2.035626 CCAACCAAGGGACCGCAT 59.964 61.111 0.00 0.00 0.00 4.73
154 155 2.342650 CCAACCAAGGGACCGCATG 61.343 63.158 0.00 0.00 0.00 4.06
155 156 2.035626 AACCAAGGGACCGCATGG 59.964 61.111 6.77 6.77 42.84 3.66
165 166 2.591753 CCGCATGGTGATGGAGGT 59.408 61.111 0.00 0.00 0.00 3.85
166 167 1.820906 CCGCATGGTGATGGAGGTG 60.821 63.158 0.00 0.00 0.00 4.00
167 168 2.475466 CGCATGGTGATGGAGGTGC 61.475 63.158 0.00 0.00 0.00 5.01
168 169 2.475466 GCATGGTGATGGAGGTGCG 61.475 63.158 0.00 0.00 0.00 5.34
169 170 2.124570 ATGGTGATGGAGGTGCGC 60.125 61.111 0.00 0.00 0.00 6.09
170 171 2.970379 ATGGTGATGGAGGTGCGCA 61.970 57.895 5.66 5.66 0.00 6.09
171 172 2.124570 GGTGATGGAGGTGCGCAT 60.125 61.111 15.91 0.00 0.00 4.73
172 173 1.146041 GGTGATGGAGGTGCGCATA 59.854 57.895 15.91 0.00 0.00 3.14
173 174 0.250467 GGTGATGGAGGTGCGCATAT 60.250 55.000 15.91 4.87 0.00 1.78
174 175 0.870393 GTGATGGAGGTGCGCATATG 59.130 55.000 15.91 0.00 0.00 1.78
175 176 0.886043 TGATGGAGGTGCGCATATGC 60.886 55.000 15.91 18.08 37.78 3.14
176 177 1.580845 GATGGAGGTGCGCATATGCC 61.581 60.000 21.77 10.56 37.91 4.40
177 178 3.349006 GGAGGTGCGCATATGCCG 61.349 66.667 21.77 16.87 37.91 5.69
178 179 2.280119 GAGGTGCGCATATGCCGA 60.280 61.111 21.77 5.66 37.91 5.54
179 180 2.280389 AGGTGCGCATATGCCGAG 60.280 61.111 21.77 9.29 37.91 4.63
180 181 3.349006 GGTGCGCATATGCCGAGG 61.349 66.667 21.77 8.92 37.91 4.63
181 182 2.280119 GTGCGCATATGCCGAGGA 60.280 61.111 21.77 6.65 37.91 3.71
182 183 2.029518 TGCGCATATGCCGAGGAG 59.970 61.111 21.77 7.82 37.91 3.69
183 184 3.418068 GCGCATATGCCGAGGAGC 61.418 66.667 21.77 13.96 37.91 4.70
184 185 2.740055 CGCATATGCCGAGGAGCC 60.740 66.667 21.77 0.00 37.91 4.70
185 186 2.427320 GCATATGCCGAGGAGCCA 59.573 61.111 17.26 0.00 34.31 4.75
186 187 1.227943 GCATATGCCGAGGAGCCAA 60.228 57.895 17.26 0.00 34.31 4.52
187 188 0.607489 GCATATGCCGAGGAGCCAAT 60.607 55.000 17.26 0.00 34.31 3.16
188 189 1.162698 CATATGCCGAGGAGCCAATG 58.837 55.000 0.00 0.00 0.00 2.82
189 190 1.059098 ATATGCCGAGGAGCCAATGA 58.941 50.000 0.00 0.00 0.00 2.57
190 191 0.394192 TATGCCGAGGAGCCAATGAG 59.606 55.000 0.00 0.00 0.00 2.90
191 192 2.899339 GCCGAGGAGCCAATGAGC 60.899 66.667 0.00 0.00 0.00 4.26
192 193 2.203126 CCGAGGAGCCAATGAGCC 60.203 66.667 0.00 0.00 0.00 4.70
193 194 2.586245 CGAGGAGCCAATGAGCCA 59.414 61.111 0.00 0.00 0.00 4.75
194 195 1.078214 CGAGGAGCCAATGAGCCAA 60.078 57.895 0.00 0.00 0.00 4.52
195 196 1.094073 CGAGGAGCCAATGAGCCAAG 61.094 60.000 0.00 0.00 0.00 3.61
196 197 0.750911 GAGGAGCCAATGAGCCAAGG 60.751 60.000 0.00 0.00 0.00 3.61
197 198 1.755783 GGAGCCAATGAGCCAAGGG 60.756 63.158 0.00 0.00 0.00 3.95
198 199 1.755783 GAGCCAATGAGCCAAGGGG 60.756 63.158 0.00 0.00 37.18 4.79
199 200 2.761213 GCCAATGAGCCAAGGGGG 60.761 66.667 0.00 0.00 40.85 5.40
206 207 2.856988 AGCCAAGGGGGTCGGAAA 60.857 61.111 0.00 0.00 42.56 3.13
207 208 2.361230 GCCAAGGGGGTCGGAAAG 60.361 66.667 0.00 0.00 39.65 2.62
208 209 2.902457 GCCAAGGGGGTCGGAAAGA 61.902 63.158 0.00 0.00 39.65 2.52
209 210 1.299976 CCAAGGGGGTCGGAAAGAG 59.700 63.158 0.00 0.00 0.00 2.85
210 211 1.198759 CCAAGGGGGTCGGAAAGAGA 61.199 60.000 0.00 0.00 0.00 3.10
211 212 0.250513 CAAGGGGGTCGGAAAGAGAG 59.749 60.000 0.00 0.00 0.00 3.20
212 213 1.554583 AAGGGGGTCGGAAAGAGAGC 61.555 60.000 0.00 0.00 35.57 4.09
213 214 2.291043 GGGGGTCGGAAAGAGAGCA 61.291 63.158 0.00 0.00 37.81 4.26
214 215 1.677552 GGGGTCGGAAAGAGAGCAA 59.322 57.895 0.00 0.00 37.81 3.91
215 216 0.673956 GGGGTCGGAAAGAGAGCAAC 60.674 60.000 0.00 0.00 37.81 4.17
216 217 0.321996 GGGTCGGAAAGAGAGCAACT 59.678 55.000 0.00 0.00 37.81 3.16
217 218 1.673329 GGGTCGGAAAGAGAGCAACTC 60.673 57.143 3.25 3.25 45.22 3.01
218 219 1.673329 GGTCGGAAAGAGAGCAACTCC 60.673 57.143 7.20 0.00 45.96 3.85
219 220 0.608640 TCGGAAAGAGAGCAACTCCC 59.391 55.000 7.20 2.28 45.96 4.30
220 221 0.737715 CGGAAAGAGAGCAACTCCCG 60.738 60.000 7.20 9.10 45.96 5.14
221 222 0.321996 GGAAAGAGAGCAACTCCCGT 59.678 55.000 7.20 0.00 45.96 5.28
222 223 1.433534 GAAAGAGAGCAACTCCCGTG 58.566 55.000 7.20 0.00 45.96 4.94
223 224 0.035458 AAAGAGAGCAACTCCCGTGG 59.965 55.000 7.20 0.00 45.96 4.94
224 225 2.435059 GAGAGCAACTCCCGTGGC 60.435 66.667 0.33 0.00 40.55 5.01
228 229 4.043200 GCAACTCCCGTGGCTTGC 62.043 66.667 8.38 8.38 37.11 4.01
229 230 3.365265 CAACTCCCGTGGCTTGCC 61.365 66.667 4.43 4.43 0.00 4.52
237 238 2.909965 GTGGCTTGCCGGTTCCAA 60.910 61.111 1.90 0.00 0.00 3.53
238 239 2.123683 TGGCTTGCCGGTTCCAAA 60.124 55.556 1.90 0.00 0.00 3.28
239 240 2.199652 TGGCTTGCCGGTTCCAAAG 61.200 57.895 1.90 0.99 0.00 2.77
240 241 2.049156 GCTTGCCGGTTCCAAAGC 60.049 61.111 1.90 7.70 0.00 3.51
241 242 2.650778 CTTGCCGGTTCCAAAGCC 59.349 61.111 1.90 0.00 0.00 4.35
242 243 3.267597 CTTGCCGGTTCCAAAGCCG 62.268 63.158 1.90 0.00 46.80 5.52
246 247 4.084888 CGGTTCCAAAGCCGCGTC 62.085 66.667 4.92 0.00 41.53 5.19
247 248 4.084888 GGTTCCAAAGCCGCGTCG 62.085 66.667 4.92 0.00 0.00 5.12
266 267 3.716195 CCGGCCATGGACACAGGA 61.716 66.667 20.22 0.00 0.00 3.86
267 268 2.350895 CGGCCATGGACACAGGAA 59.649 61.111 20.22 0.00 0.00 3.36
268 269 1.746615 CGGCCATGGACACAGGAAG 60.747 63.158 20.22 0.00 0.00 3.46
269 270 1.380302 GGCCATGGACACAGGAAGT 59.620 57.895 18.40 0.00 0.00 3.01
270 271 0.618458 GGCCATGGACACAGGAAGTA 59.382 55.000 18.40 0.00 0.00 2.24
271 272 1.679032 GGCCATGGACACAGGAAGTAC 60.679 57.143 18.40 0.00 0.00 2.73
272 273 2.007049 GCCATGGACACAGGAAGTACG 61.007 57.143 18.40 0.00 0.00 3.67
273 274 1.548719 CCATGGACACAGGAAGTACGA 59.451 52.381 5.56 0.00 0.00 3.43
274 275 2.607187 CATGGACACAGGAAGTACGAC 58.393 52.381 0.00 0.00 0.00 4.34
275 276 0.963962 TGGACACAGGAAGTACGACC 59.036 55.000 0.00 3.71 0.00 4.79
276 277 0.245813 GGACACAGGAAGTACGACCC 59.754 60.000 7.55 1.27 0.00 4.46
277 278 0.245813 GACACAGGAAGTACGACCCC 59.754 60.000 7.55 0.00 0.00 4.95
278 279 1.214589 CACAGGAAGTACGACCCCG 59.785 63.158 7.55 0.00 42.50 5.73
289 290 2.818274 GACCCCGTCGTTGCCATC 60.818 66.667 0.00 0.00 0.00 3.51
290 291 4.404098 ACCCCGTCGTTGCCATCC 62.404 66.667 0.00 0.00 0.00 3.51
291 292 4.096003 CCCCGTCGTTGCCATCCT 62.096 66.667 0.00 0.00 0.00 3.24
292 293 2.046314 CCCGTCGTTGCCATCCTT 60.046 61.111 0.00 0.00 0.00 3.36
293 294 2.398554 CCCGTCGTTGCCATCCTTG 61.399 63.158 0.00 0.00 0.00 3.61
294 295 2.398554 CCGTCGTTGCCATCCTTGG 61.399 63.158 0.00 0.00 46.66 3.61
295 296 1.375396 CGTCGTTGCCATCCTTGGA 60.375 57.895 0.00 0.00 46.92 3.53
296 297 1.635663 CGTCGTTGCCATCCTTGGAC 61.636 60.000 0.00 0.00 46.92 4.02
297 298 1.002624 TCGTTGCCATCCTTGGACC 60.003 57.895 0.00 0.00 46.92 4.46
298 299 2.046285 CGTTGCCATCCTTGGACCC 61.046 63.158 0.00 0.00 46.92 4.46
299 300 2.046285 GTTGCCATCCTTGGACCCG 61.046 63.158 0.00 0.00 46.92 5.28
300 301 3.280938 TTGCCATCCTTGGACCCGG 62.281 63.158 0.00 0.00 46.92 5.73
302 303 4.856801 CCATCCTTGGACCCGGCG 62.857 72.222 0.00 0.00 46.92 6.46
359 360 4.351054 GCAGGTGAGGGGTGGGTG 62.351 72.222 0.00 0.00 0.00 4.61
360 361 4.351054 CAGGTGAGGGGTGGGTGC 62.351 72.222 0.00 0.00 0.00 5.01
363 364 4.351054 GTGAGGGGTGGGTGCCAG 62.351 72.222 0.00 0.00 32.34 4.85
377 378 3.449227 CCAGGTCGCGAGTGGCTA 61.449 66.667 21.23 0.00 40.44 3.93
378 379 2.103143 CAGGTCGCGAGTGGCTAG 59.897 66.667 10.24 0.00 40.44 3.42
379 380 3.141488 AGGTCGCGAGTGGCTAGG 61.141 66.667 10.24 0.00 40.44 3.02
380 381 3.450115 GGTCGCGAGTGGCTAGGT 61.450 66.667 10.24 0.00 40.44 3.08
381 382 2.572284 GTCGCGAGTGGCTAGGTT 59.428 61.111 10.24 0.00 40.44 3.50
382 383 1.080025 GTCGCGAGTGGCTAGGTTT 60.080 57.895 10.24 0.00 40.44 3.27
383 384 1.077089 GTCGCGAGTGGCTAGGTTTC 61.077 60.000 10.24 0.00 40.44 2.78
384 385 1.810030 CGCGAGTGGCTAGGTTTCC 60.810 63.158 0.00 0.00 40.44 3.13
385 386 1.449778 GCGAGTGGCTAGGTTTCCC 60.450 63.158 0.00 0.00 39.11 3.97
386 387 1.221021 CGAGTGGCTAGGTTTCCCC 59.779 63.158 0.00 0.00 0.00 4.81
388 389 0.253327 GAGTGGCTAGGTTTCCCCTG 59.747 60.000 0.00 0.00 45.81 4.45
389 390 0.178873 AGTGGCTAGGTTTCCCCTGA 60.179 55.000 0.00 0.00 45.81 3.86
390 391 0.253327 GTGGCTAGGTTTCCCCTGAG 59.747 60.000 0.00 0.00 45.81 3.35
391 392 0.178873 TGGCTAGGTTTCCCCTGAGT 60.179 55.000 0.00 0.00 45.81 3.41
392 393 0.542333 GGCTAGGTTTCCCCTGAGTC 59.458 60.000 0.00 0.00 45.81 3.36
393 394 0.175989 GCTAGGTTTCCCCTGAGTCG 59.824 60.000 0.00 0.00 45.81 4.18
394 395 0.175989 CTAGGTTTCCCCTGAGTCGC 59.824 60.000 0.00 0.00 45.81 5.19
395 396 1.262640 TAGGTTTCCCCTGAGTCGCC 61.263 60.000 0.00 0.00 45.81 5.54
396 397 2.046217 GTTTCCCCTGAGTCGCCC 60.046 66.667 0.00 0.00 0.00 6.13
397 398 3.702048 TTTCCCCTGAGTCGCCCG 61.702 66.667 0.00 0.00 0.00 6.13
423 424 2.772622 GACATGGGGGTCGGGGAT 60.773 66.667 0.00 0.00 0.00 3.85
424 425 2.772622 ACATGGGGGTCGGGGATC 60.773 66.667 0.00 0.00 0.00 3.36
425 426 3.941188 CATGGGGGTCGGGGATCG 61.941 72.222 0.00 0.00 40.90 3.69
432 433 3.782443 GTCGGGGATCGGCCACTT 61.782 66.667 2.24 0.00 38.21 3.16
433 434 2.042741 TCGGGGATCGGCCACTTA 60.043 61.111 2.24 0.00 38.21 2.24
434 435 1.686455 TCGGGGATCGGCCACTTAA 60.686 57.895 2.24 0.00 38.21 1.85
435 436 1.222387 CGGGGATCGGCCACTTAAA 59.778 57.895 2.24 0.00 38.21 1.52
436 437 0.814010 CGGGGATCGGCCACTTAAAG 60.814 60.000 2.24 0.00 38.21 1.85
437 438 0.544697 GGGGATCGGCCACTTAAAGA 59.455 55.000 2.24 0.00 36.99 2.52
438 439 1.475213 GGGGATCGGCCACTTAAAGAG 60.475 57.143 2.24 0.00 36.99 2.85
439 440 1.485066 GGGATCGGCCACTTAAAGAGA 59.515 52.381 2.24 0.00 38.95 3.10
440 441 2.104963 GGGATCGGCCACTTAAAGAGAT 59.895 50.000 2.24 0.00 38.95 2.75
441 442 3.433740 GGGATCGGCCACTTAAAGAGATT 60.434 47.826 2.24 0.00 38.95 2.40
442 443 3.561725 GGATCGGCCACTTAAAGAGATTG 59.438 47.826 2.24 0.00 36.34 2.67
443 444 3.973206 TCGGCCACTTAAAGAGATTGA 57.027 42.857 2.24 0.00 0.00 2.57
444 445 4.487714 TCGGCCACTTAAAGAGATTGAT 57.512 40.909 2.24 0.00 0.00 2.57
445 446 5.607939 TCGGCCACTTAAAGAGATTGATA 57.392 39.130 2.24 0.00 0.00 2.15
446 447 5.601662 TCGGCCACTTAAAGAGATTGATAG 58.398 41.667 2.24 0.00 0.00 2.08
447 448 5.128827 TCGGCCACTTAAAGAGATTGATAGT 59.871 40.000 2.24 0.00 0.00 2.12
448 449 5.817816 CGGCCACTTAAAGAGATTGATAGTT 59.182 40.000 2.24 0.00 0.00 2.24
449 450 6.238211 CGGCCACTTAAAGAGATTGATAGTTG 60.238 42.308 2.24 0.00 0.00 3.16
450 451 6.038714 GGCCACTTAAAGAGATTGATAGTTGG 59.961 42.308 0.00 0.00 0.00 3.77
451 452 6.038714 GCCACTTAAAGAGATTGATAGTTGGG 59.961 42.308 0.00 0.00 0.00 4.12
452 453 7.112779 CCACTTAAAGAGATTGATAGTTGGGT 58.887 38.462 0.00 0.00 0.00 4.51
453 454 7.066284 CCACTTAAAGAGATTGATAGTTGGGTG 59.934 40.741 0.00 0.00 0.00 4.61
454 455 7.824289 CACTTAAAGAGATTGATAGTTGGGTGA 59.176 37.037 0.00 0.00 0.00 4.02
455 456 7.824779 ACTTAAAGAGATTGATAGTTGGGTGAC 59.175 37.037 0.00 0.00 0.00 3.67
456 457 4.392921 AGAGATTGATAGTTGGGTGACG 57.607 45.455 0.00 0.00 0.00 4.35
457 458 3.133003 AGAGATTGATAGTTGGGTGACGG 59.867 47.826 0.00 0.00 0.00 4.79
458 459 1.940613 GATTGATAGTTGGGTGACGGC 59.059 52.381 0.00 0.00 0.00 5.68
459 460 0.687920 TTGATAGTTGGGTGACGGCA 59.312 50.000 0.00 0.00 0.00 5.69
460 461 0.908910 TGATAGTTGGGTGACGGCAT 59.091 50.000 0.00 0.00 0.00 4.40
461 462 2.112190 TGATAGTTGGGTGACGGCATA 58.888 47.619 0.00 0.00 0.00 3.14
462 463 2.102420 TGATAGTTGGGTGACGGCATAG 59.898 50.000 0.00 0.00 0.00 2.23
463 464 0.828022 TAGTTGGGTGACGGCATAGG 59.172 55.000 0.00 0.00 0.00 2.57
464 465 1.198759 AGTTGGGTGACGGCATAGGT 61.199 55.000 0.00 0.00 0.00 3.08
465 466 0.322187 GTTGGGTGACGGCATAGGTT 60.322 55.000 0.00 0.00 0.00 3.50
466 467 1.065998 GTTGGGTGACGGCATAGGTTA 60.066 52.381 0.00 0.00 0.00 2.85
467 468 1.502690 TGGGTGACGGCATAGGTTAT 58.497 50.000 0.00 0.00 0.00 1.89
468 469 1.140052 TGGGTGACGGCATAGGTTATG 59.860 52.381 0.00 0.00 39.18 1.90
486 487 6.970484 GGTTATGCATAAACCATCTACAAGG 58.030 40.000 21.71 0.00 44.83 3.61
487 488 6.438763 GTTATGCATAAACCATCTACAAGGC 58.561 40.000 20.46 0.00 0.00 4.35
488 489 3.961849 TGCATAAACCATCTACAAGGCA 58.038 40.909 0.00 0.00 0.00 4.75
489 490 3.947196 TGCATAAACCATCTACAAGGCAG 59.053 43.478 0.00 0.00 0.00 4.85
490 491 3.243201 GCATAAACCATCTACAAGGCAGC 60.243 47.826 0.00 0.00 0.00 5.25
491 492 2.584835 AAACCATCTACAAGGCAGCA 57.415 45.000 0.00 0.00 0.00 4.41
492 493 1.826385 AACCATCTACAAGGCAGCAC 58.174 50.000 0.00 0.00 0.00 4.40
493 494 0.987294 ACCATCTACAAGGCAGCACT 59.013 50.000 0.00 0.00 0.00 4.40
494 495 2.187958 ACCATCTACAAGGCAGCACTA 58.812 47.619 0.00 0.00 0.00 2.74
495 496 2.169352 ACCATCTACAAGGCAGCACTAG 59.831 50.000 0.00 0.00 0.00 2.57
496 497 2.208431 CATCTACAAGGCAGCACTAGC 58.792 52.381 0.00 0.00 42.56 3.42
497 498 1.266178 TCTACAAGGCAGCACTAGCA 58.734 50.000 0.00 0.00 45.49 3.49
498 499 1.623311 TCTACAAGGCAGCACTAGCAA 59.377 47.619 0.00 0.00 45.49 3.91
499 500 2.005451 CTACAAGGCAGCACTAGCAAG 58.995 52.381 0.00 0.00 45.49 4.01
500 501 0.397941 ACAAGGCAGCACTAGCAAGA 59.602 50.000 0.00 0.00 45.49 3.02
501 502 0.801251 CAAGGCAGCACTAGCAAGAC 59.199 55.000 0.00 0.00 45.49 3.01
502 503 0.397941 AAGGCAGCACTAGCAAGACA 59.602 50.000 0.00 0.00 45.49 3.41
503 504 0.397941 AGGCAGCACTAGCAAGACAA 59.602 50.000 0.00 0.00 45.49 3.18
504 505 0.519077 GGCAGCACTAGCAAGACAAC 59.481 55.000 0.00 0.00 45.49 3.32
505 506 1.229428 GCAGCACTAGCAAGACAACA 58.771 50.000 0.00 0.00 45.49 3.33
506 507 1.603802 GCAGCACTAGCAAGACAACAA 59.396 47.619 0.00 0.00 45.49 2.83
507 508 2.033299 GCAGCACTAGCAAGACAACAAA 59.967 45.455 0.00 0.00 45.49 2.83
508 509 3.304928 GCAGCACTAGCAAGACAACAAAT 60.305 43.478 0.00 0.00 45.49 2.32
509 510 4.083324 GCAGCACTAGCAAGACAACAAATA 60.083 41.667 0.00 0.00 45.49 1.40
510 511 5.625251 CAGCACTAGCAAGACAACAAATAG 58.375 41.667 0.00 0.00 45.49 1.73
511 512 4.697352 AGCACTAGCAAGACAACAAATAGG 59.303 41.667 0.00 0.00 45.49 2.57
512 513 4.672801 GCACTAGCAAGACAACAAATAGGC 60.673 45.833 0.00 0.00 41.58 3.93
513 514 4.455533 CACTAGCAAGACAACAAATAGGCA 59.544 41.667 0.00 0.00 0.00 4.75
514 515 5.048782 CACTAGCAAGACAACAAATAGGCAA 60.049 40.000 0.00 0.00 0.00 4.52
515 516 4.935352 AGCAAGACAACAAATAGGCAAA 57.065 36.364 0.00 0.00 0.00 3.68
516 517 5.473066 AGCAAGACAACAAATAGGCAAAT 57.527 34.783 0.00 0.00 0.00 2.32
517 518 5.857268 AGCAAGACAACAAATAGGCAAATT 58.143 33.333 0.00 0.00 0.00 1.82
518 519 5.928264 AGCAAGACAACAAATAGGCAAATTC 59.072 36.000 0.00 0.00 0.00 2.17
519 520 5.695816 GCAAGACAACAAATAGGCAAATTCA 59.304 36.000 0.00 0.00 0.00 2.57
520 521 6.202570 GCAAGACAACAAATAGGCAAATTCAA 59.797 34.615 0.00 0.00 0.00 2.69
521 522 7.254727 GCAAGACAACAAATAGGCAAATTCAAA 60.255 33.333 0.00 0.00 0.00 2.69
522 523 7.713764 AGACAACAAATAGGCAAATTCAAAC 57.286 32.000 0.00 0.00 0.00 2.93
523 524 7.500141 AGACAACAAATAGGCAAATTCAAACT 58.500 30.769 0.00 0.00 0.00 2.66
524 525 7.986889 AGACAACAAATAGGCAAATTCAAACTT 59.013 29.630 0.00 0.00 0.00 2.66
525 526 8.504812 ACAACAAATAGGCAAATTCAAACTTT 57.495 26.923 0.00 0.00 0.00 2.66
526 527 8.397148 ACAACAAATAGGCAAATTCAAACTTTG 58.603 29.630 0.00 0.00 36.81 2.77
527 528 7.495135 ACAAATAGGCAAATTCAAACTTTGG 57.505 32.000 1.62 0.00 34.81 3.28
528 529 6.486320 ACAAATAGGCAAATTCAAACTTTGGG 59.514 34.615 1.62 0.00 34.81 4.12
529 530 5.823861 ATAGGCAAATTCAAACTTTGGGT 57.176 34.783 1.62 0.00 34.81 4.51
530 531 6.926630 ATAGGCAAATTCAAACTTTGGGTA 57.073 33.333 1.62 0.00 34.81 3.69
531 532 5.622346 AGGCAAATTCAAACTTTGGGTAA 57.378 34.783 1.62 0.00 34.81 2.85
532 533 5.364778 AGGCAAATTCAAACTTTGGGTAAC 58.635 37.500 1.62 0.00 34.81 2.50
533 534 4.210328 GGCAAATTCAAACTTTGGGTAACG 59.790 41.667 1.62 0.00 34.81 3.18
534 535 4.318475 GCAAATTCAAACTTTGGGTAACGC 60.318 41.667 1.62 0.00 34.81 4.84
535 536 4.929819 AATTCAAACTTTGGGTAACGCT 57.070 36.364 1.62 0.00 37.60 5.07
536 537 4.929819 ATTCAAACTTTGGGTAACGCTT 57.070 36.364 1.62 0.00 37.60 4.68
537 538 4.722361 TTCAAACTTTGGGTAACGCTTT 57.278 36.364 1.62 0.00 37.60 3.51
538 539 4.035278 TCAAACTTTGGGTAACGCTTTG 57.965 40.909 1.62 0.00 37.60 2.77
539 540 3.444388 TCAAACTTTGGGTAACGCTTTGT 59.556 39.130 1.62 0.00 37.60 2.83
540 541 4.639310 TCAAACTTTGGGTAACGCTTTGTA 59.361 37.500 1.62 0.00 37.60 2.41
541 542 5.299782 TCAAACTTTGGGTAACGCTTTGTAT 59.700 36.000 1.62 0.00 37.60 2.29
542 543 4.759516 ACTTTGGGTAACGCTTTGTATG 57.240 40.909 0.00 0.00 37.60 2.39
543 544 4.391155 ACTTTGGGTAACGCTTTGTATGA 58.609 39.130 0.00 0.00 37.60 2.15
544 545 4.454504 ACTTTGGGTAACGCTTTGTATGAG 59.545 41.667 0.00 0.00 37.60 2.90
545 546 3.965379 TGGGTAACGCTTTGTATGAGA 57.035 42.857 0.00 0.00 37.60 3.27
546 547 4.274602 TGGGTAACGCTTTGTATGAGAA 57.725 40.909 0.00 0.00 37.60 2.87
547 548 4.643463 TGGGTAACGCTTTGTATGAGAAA 58.357 39.130 0.00 0.00 37.60 2.52
548 549 5.064558 TGGGTAACGCTTTGTATGAGAAAA 58.935 37.500 0.00 0.00 37.60 2.29
549 550 5.708230 TGGGTAACGCTTTGTATGAGAAAAT 59.292 36.000 0.00 0.00 37.60 1.82
550 551 6.207810 TGGGTAACGCTTTGTATGAGAAAATT 59.792 34.615 0.00 0.00 37.60 1.82
551 552 6.745907 GGGTAACGCTTTGTATGAGAAAATTC 59.254 38.462 0.00 0.00 37.60 2.17
552 553 6.464834 GGTAACGCTTTGTATGAGAAAATTCG 59.535 38.462 0.00 0.00 0.00 3.34
553 554 4.403453 ACGCTTTGTATGAGAAAATTCGC 58.597 39.130 0.00 0.00 0.00 4.70
554 555 3.786048 CGCTTTGTATGAGAAAATTCGCC 59.214 43.478 0.00 0.00 0.00 5.54
555 556 4.105486 GCTTTGTATGAGAAAATTCGCCC 58.895 43.478 0.00 0.00 0.00 6.13
556 557 4.342772 CTTTGTATGAGAAAATTCGCCCG 58.657 43.478 0.00 0.00 0.00 6.13
557 558 2.980568 TGTATGAGAAAATTCGCCCGT 58.019 42.857 0.00 0.00 0.00 5.28
558 559 2.933906 TGTATGAGAAAATTCGCCCGTC 59.066 45.455 0.00 0.00 0.00 4.79
559 560 1.006832 ATGAGAAAATTCGCCCGTCG 58.993 50.000 0.00 0.00 40.15 5.12
560 561 0.320073 TGAGAAAATTCGCCCGTCGT 60.320 50.000 0.00 0.00 39.67 4.34
561 562 0.094730 GAGAAAATTCGCCCGTCGTG 59.905 55.000 0.00 0.00 39.67 4.35
562 563 1.511254 GAAAATTCGCCCGTCGTGC 60.511 57.895 0.00 0.00 39.67 5.34
563 564 1.908066 GAAAATTCGCCCGTCGTGCT 61.908 55.000 0.00 0.00 39.67 4.40
564 565 2.182614 AAAATTCGCCCGTCGTGCTG 62.183 55.000 0.00 0.00 39.67 4.41
565 566 3.876589 AATTCGCCCGTCGTGCTGT 62.877 57.895 0.00 0.00 39.67 4.40
573 574 3.771491 GTCGTGCTGTCGCTGCAG 61.771 66.667 10.11 10.11 38.86 4.41
584 585 4.030452 GCTGCAGGCCGTCAACAC 62.030 66.667 17.12 0.00 34.27 3.32
585 586 2.591429 CTGCAGGCCGTCAACACA 60.591 61.111 5.57 0.00 0.00 3.72
586 587 1.968017 CTGCAGGCCGTCAACACAT 60.968 57.895 5.57 0.00 0.00 3.21
587 588 0.673333 CTGCAGGCCGTCAACACATA 60.673 55.000 5.57 0.00 0.00 2.29
588 589 0.250510 TGCAGGCCGTCAACACATAA 60.251 50.000 0.00 0.00 0.00 1.90
589 590 0.878416 GCAGGCCGTCAACACATAAA 59.122 50.000 0.00 0.00 0.00 1.40
590 591 1.472480 GCAGGCCGTCAACACATAAAT 59.528 47.619 0.00 0.00 0.00 1.40
591 592 2.680841 GCAGGCCGTCAACACATAAATA 59.319 45.455 0.00 0.00 0.00 1.40
592 593 3.486875 GCAGGCCGTCAACACATAAATAC 60.487 47.826 0.00 0.00 0.00 1.89
593 594 2.933906 AGGCCGTCAACACATAAATACG 59.066 45.455 0.00 0.00 0.00 3.06
594 595 2.674357 GGCCGTCAACACATAAATACGT 59.326 45.455 0.00 0.00 0.00 3.57
595 596 3.125658 GGCCGTCAACACATAAATACGTT 59.874 43.478 0.00 0.00 0.00 3.99
596 597 4.085884 GCCGTCAACACATAAATACGTTG 58.914 43.478 0.00 0.00 40.03 4.10
597 598 4.643953 CCGTCAACACATAAATACGTTGG 58.356 43.478 0.00 0.00 39.33 3.77
598 599 4.152759 CCGTCAACACATAAATACGTTGGT 59.847 41.667 0.00 0.00 39.33 3.67
599 600 5.334260 CCGTCAACACATAAATACGTTGGTT 60.334 40.000 0.00 0.00 39.33 3.67
600 601 5.562248 CGTCAACACATAAATACGTTGGTTG 59.438 40.000 0.00 3.04 39.33 3.77
601 602 5.341196 GTCAACACATAAATACGTTGGTTGC 59.659 40.000 0.00 0.00 39.33 4.17
602 603 5.239744 TCAACACATAAATACGTTGGTTGCT 59.760 36.000 0.00 0.00 39.33 3.91
603 604 5.041951 ACACATAAATACGTTGGTTGCTG 57.958 39.130 0.00 0.00 0.00 4.41
604 605 4.083003 ACACATAAATACGTTGGTTGCTGG 60.083 41.667 0.00 0.00 0.00 4.85
605 606 3.119637 ACATAAATACGTTGGTTGCTGGC 60.120 43.478 0.00 0.00 0.00 4.85
606 607 1.323412 AAATACGTTGGTTGCTGGCA 58.677 45.000 0.00 0.00 0.00 4.92
607 608 1.323412 AATACGTTGGTTGCTGGCAA 58.677 45.000 3.72 3.72 0.00 4.52
608 609 0.881118 ATACGTTGGTTGCTGGCAAG 59.119 50.000 8.34 0.00 36.52 4.01
609 610 0.179043 TACGTTGGTTGCTGGCAAGA 60.179 50.000 8.34 0.00 36.52 3.02
610 611 1.283793 CGTTGGTTGCTGGCAAGAG 59.716 57.895 8.34 0.00 36.52 2.85
611 612 1.006922 GTTGGTTGCTGGCAAGAGC 60.007 57.895 8.34 0.00 39.62 4.09
616 617 2.967397 TGCTGGCAAGAGCAATGC 59.033 55.556 0.00 0.00 46.05 3.56
617 618 1.904378 TGCTGGCAAGAGCAATGCA 60.904 52.632 8.35 0.00 46.05 3.96
618 619 1.445582 GCTGGCAAGAGCAATGCAC 60.446 57.895 8.35 0.00 45.60 4.57
619 620 1.214589 CTGGCAAGAGCAATGCACC 59.785 57.895 8.35 1.09 45.60 5.01
620 621 2.180017 GGCAAGAGCAATGCACCG 59.820 61.111 8.35 0.00 45.60 4.94
621 622 2.629656 GGCAAGAGCAATGCACCGT 61.630 57.895 8.35 0.00 45.60 4.83
622 623 1.305219 GGCAAGAGCAATGCACCGTA 61.305 55.000 8.35 0.00 45.60 4.02
623 624 0.734889 GCAAGAGCAATGCACCGTAT 59.265 50.000 8.35 0.00 43.29 3.06
624 625 1.532505 GCAAGAGCAATGCACCGTATG 60.533 52.381 8.35 0.00 43.29 2.39
633 634 3.164576 CACCGTATGCACCACACG 58.835 61.111 0.00 0.00 35.50 4.49
636 637 2.434185 CGTATGCACCACACGGCT 60.434 61.111 0.00 0.00 34.57 5.52
637 638 1.153726 CGTATGCACCACACGGCTA 60.154 57.895 0.00 0.00 34.57 3.93
638 639 1.418342 CGTATGCACCACACGGCTAC 61.418 60.000 0.00 0.00 34.57 3.58
639 640 0.390603 GTATGCACCACACGGCTACA 60.391 55.000 0.00 0.00 34.57 2.74
640 641 0.390603 TATGCACCACACGGCTACAC 60.391 55.000 0.00 0.00 34.57 2.90
641 642 2.280524 GCACCACACGGCTACACA 60.281 61.111 0.00 0.00 34.57 3.72
642 643 1.671054 GCACCACACGGCTACACAT 60.671 57.895 0.00 0.00 34.57 3.21
643 644 1.911293 GCACCACACGGCTACACATG 61.911 60.000 0.00 0.00 34.57 3.21
644 645 0.602638 CACCACACGGCTACACATGT 60.603 55.000 0.00 0.00 34.57 3.21
645 646 0.970640 ACCACACGGCTACACATGTA 59.029 50.000 0.00 0.00 34.57 2.29
646 647 1.345089 ACCACACGGCTACACATGTAA 59.655 47.619 0.00 0.00 34.57 2.41
647 648 1.999735 CCACACGGCTACACATGTAAG 59.000 52.381 0.00 0.00 0.00 2.34
660 661 1.573829 ATGTAAGCACCGTGGCGTTG 61.574 55.000 0.00 0.00 39.27 4.10
666 667 2.665185 ACCGTGGCGTTGCTTCTC 60.665 61.111 0.00 0.00 0.00 2.87
676 677 2.971261 GCGTTGCTTCTCTTTTAAACCG 59.029 45.455 0.00 0.00 0.00 4.44
682 683 5.067273 TGCTTCTCTTTTAAACCGAATGGA 58.933 37.500 0.00 0.00 39.21 3.41
686 687 4.449743 TCTCTTTTAAACCGAATGGACACG 59.550 41.667 0.00 0.00 39.21 4.49
688 689 5.295950 TCTTTTAAACCGAATGGACACGTA 58.704 37.500 0.00 0.00 39.21 3.57
734 742 9.988815 CTGGTAGTAACAGATTAATAATGAGCT 57.011 33.333 9.81 0.00 38.20 4.09
743 751 8.818057 ACAGATTAATAATGAGCTAACGACAAC 58.182 33.333 7.05 0.00 0.00 3.32
751 759 0.856641 GCTAACGACAACAGCAACGA 59.143 50.000 0.00 0.00 35.35 3.85
757 765 2.353269 ACGACAACAGCAACGAATGAAA 59.647 40.909 0.00 0.00 0.00 2.69
760 768 3.900941 ACAACAGCAACGAATGAAATCC 58.099 40.909 0.00 0.00 0.00 3.01
769 777 5.390613 CAACGAATGAAATCCAGGTTGTAC 58.609 41.667 0.00 0.00 31.29 2.90
802 810 4.776795 ACCGTGTACCAAATTCCAATTC 57.223 40.909 0.00 0.00 0.00 2.17
803 811 3.189702 ACCGTGTACCAAATTCCAATTCG 59.810 43.478 0.00 0.00 0.00 3.34
804 812 3.437395 CCGTGTACCAAATTCCAATTCGA 59.563 43.478 0.00 0.00 0.00 3.71
805 813 4.083217 CCGTGTACCAAATTCCAATTCGAA 60.083 41.667 0.00 0.00 0.00 3.71
806 814 5.453648 CGTGTACCAAATTCCAATTCGAAA 58.546 37.500 0.00 0.00 0.00 3.46
807 815 5.915758 CGTGTACCAAATTCCAATTCGAAAA 59.084 36.000 0.00 0.00 0.00 2.29
808 816 6.418226 CGTGTACCAAATTCCAATTCGAAAAA 59.582 34.615 0.00 0.00 0.00 1.94
809 817 7.358023 CGTGTACCAAATTCCAATTCGAAAAAG 60.358 37.037 0.00 0.00 0.00 2.27
810 818 5.922739 ACCAAATTCCAATTCGAAAAAGC 57.077 34.783 0.00 0.00 0.00 3.51
811 819 5.610398 ACCAAATTCCAATTCGAAAAAGCT 58.390 33.333 0.00 0.00 0.00 3.74
812 820 6.054941 ACCAAATTCCAATTCGAAAAAGCTT 58.945 32.000 0.00 0.00 0.00 3.74
813 821 6.202762 ACCAAATTCCAATTCGAAAAAGCTTC 59.797 34.615 0.00 0.00 0.00 3.86
814 822 6.202570 CCAAATTCCAATTCGAAAAAGCTTCA 59.797 34.615 0.00 0.00 0.00 3.02
815 823 7.254727 CCAAATTCCAATTCGAAAAAGCTTCAA 60.255 33.333 0.00 0.00 0.00 2.69
816 824 7.784633 AATTCCAATTCGAAAAAGCTTCAAA 57.215 28.000 0.00 0.00 0.00 2.69
817 825 7.784633 ATTCCAATTCGAAAAAGCTTCAAAA 57.215 28.000 0.00 0.00 0.00 2.44
818 826 6.826893 TCCAATTCGAAAAAGCTTCAAAAG 57.173 33.333 0.00 0.00 0.00 2.27
819 827 6.568869 TCCAATTCGAAAAAGCTTCAAAAGA 58.431 32.000 0.00 0.00 0.00 2.52
820 828 7.038659 TCCAATTCGAAAAAGCTTCAAAAGAA 58.961 30.769 0.00 3.20 0.00 2.52
821 829 7.547370 TCCAATTCGAAAAAGCTTCAAAAGAAA 59.453 29.630 0.00 0.00 0.00 2.52
822 830 8.337532 CCAATTCGAAAAAGCTTCAAAAGAAAT 58.662 29.630 0.00 0.00 0.00 2.17
823 831 9.706846 CAATTCGAAAAAGCTTCAAAAGAAATT 57.293 25.926 0.00 0.00 0.00 1.82
825 833 9.920826 ATTCGAAAAAGCTTCAAAAGAAATTTC 57.079 25.926 10.33 10.33 0.00 2.17
826 834 7.905126 TCGAAAAAGCTTCAAAAGAAATTTCC 58.095 30.769 14.61 0.00 0.00 3.13
827 835 7.547370 TCGAAAAAGCTTCAAAAGAAATTTCCA 59.453 29.630 14.61 0.00 0.00 3.53
828 836 8.174422 CGAAAAAGCTTCAAAAGAAATTTCCAA 58.826 29.630 14.61 0.24 0.00 3.53
843 851 8.819845 AGAAATTTCCAATTAGAAAATCTGCCT 58.180 29.630 14.61 1.73 39.11 4.75
849 857 2.425143 TAGAAAATCTGCCTGCCAGG 57.575 50.000 6.32 6.32 42.05 4.45
933 942 5.729229 TGGAAGGTTCTCCCTATAAACATCA 59.271 40.000 0.00 0.00 45.47 3.07
935 944 5.277857 AGGTTCTCCCTATAAACATCACG 57.722 43.478 0.00 0.00 43.87 4.35
967 980 1.145377 ACCACTTGTCCGGTCACAC 59.855 57.895 0.00 0.00 0.00 3.82
968 981 1.335132 ACCACTTGTCCGGTCACACT 61.335 55.000 0.00 0.00 0.00 3.55
969 982 0.600255 CCACTTGTCCGGTCACACTC 60.600 60.000 0.00 0.00 0.00 3.51
970 983 0.104120 CACTTGTCCGGTCACACTCA 59.896 55.000 0.00 0.00 0.00 3.41
971 984 0.104304 ACTTGTCCGGTCACACTCAC 59.896 55.000 0.00 0.00 0.00 3.51
972 985 0.104120 CTTGTCCGGTCACACTCACA 59.896 55.000 0.00 0.00 0.00 3.58
973 986 0.179094 TTGTCCGGTCACACTCACAC 60.179 55.000 0.00 0.00 0.00 3.82
974 987 1.660575 GTCCGGTCACACTCACACG 60.661 63.158 0.00 0.00 0.00 4.49
975 988 2.355837 CCGGTCACACTCACACGG 60.356 66.667 0.00 0.00 35.01 4.94
976 989 2.355837 CGGTCACACTCACACGGG 60.356 66.667 0.00 0.00 0.00 5.28
993 1006 1.586564 GGTACGTCGCAGCTGCTAG 60.587 63.158 34.22 25.74 39.32 3.42
1011 1024 3.605486 GCTAGCACAAAATGAAGCTTTCG 59.395 43.478 10.63 0.00 36.44 3.46
1012 1025 3.988379 AGCACAAAATGAAGCTTTCGA 57.012 38.095 0.00 0.00 30.80 3.71
1018 1031 3.498927 AAATGAAGCTTTCGATGGCAG 57.501 42.857 0.00 0.00 0.00 4.85
1023 1036 2.787249 CTTTCGATGGCAGCCGTG 59.213 61.111 12.21 3.73 0.00 4.94
1050 1063 0.737219 TAGTCTTAGCCTTCGTCGCC 59.263 55.000 0.00 0.00 0.00 5.54
1053 1066 3.352338 CTTAGCCTTCGTCGCCGGT 62.352 63.158 1.90 0.00 33.95 5.28
1260 1273 2.235016 CGCCGTCACACTCGTTGTT 61.235 57.895 0.00 0.00 35.67 2.83
1545 1567 2.806621 GGTTACGACGTGACGGCC 60.807 66.667 15.60 0.00 37.61 6.13
1546 1568 2.806621 GTTACGACGTGACGGCCC 60.807 66.667 11.56 0.00 37.61 5.80
1657 1679 2.317149 CTTCGTGGAGATCCTGGGCC 62.317 65.000 0.00 0.00 36.82 5.80
1658 1680 4.227134 CGTGGAGATCCTGGGCCG 62.227 72.222 0.00 0.00 36.82 6.13
1719 1773 1.367840 GGGCTGATCGCGGAAGTAT 59.632 57.895 6.13 0.00 40.44 2.12
1725 1779 2.557056 CTGATCGCGGAAGTATCCCTAA 59.443 50.000 6.13 0.00 43.37 2.69
1803 1858 3.055094 TGTGGAGAGGTGATTTTCTAGCC 60.055 47.826 0.00 0.00 0.00 3.93
1857 1913 2.224090 TGTTCAAACTCGATCGTTCCCA 60.224 45.455 15.94 0.00 0.00 4.37
1997 2079 3.921119 TCAAACGTCGAGCTTAACCTA 57.079 42.857 0.00 0.00 0.00 3.08
2088 2199 3.957435 ATCGTCAGTCGGGCTGGGA 62.957 63.158 10.12 8.15 45.08 4.37
2118 2265 1.153706 CGTTGGAGTCGCCGGTATT 60.154 57.895 1.90 0.00 40.66 1.89
2177 2325 2.082629 TTGAGCTTCTCGTCGCCACA 62.083 55.000 0.00 0.00 32.35 4.17
2223 2372 5.013568 TCAAGAAAGTCAGGTCGTTGTTA 57.986 39.130 0.00 0.00 0.00 2.41
2655 2903 2.040544 GGGAACGCACATGTGGAGG 61.041 63.158 26.55 1.99 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.008330 CTGTGCTTCCTTCCAGATCTTG 58.992 50.000 0.00 0.00 0.00 3.02
8 9 2.909006 TCTGTGCTTCCTTCCAGATCTT 59.091 45.455 0.00 0.00 0.00 2.40
9 10 2.544721 TCTGTGCTTCCTTCCAGATCT 58.455 47.619 0.00 0.00 0.00 2.75
10 11 3.557228 ATCTGTGCTTCCTTCCAGATC 57.443 47.619 0.00 0.00 39.79 2.75
11 12 3.113824 AGATCTGTGCTTCCTTCCAGAT 58.886 45.455 0.00 0.00 44.95 2.90
12 13 2.235650 CAGATCTGTGCTTCCTTCCAGA 59.764 50.000 14.95 0.00 38.24 3.86
13 14 2.630158 CAGATCTGTGCTTCCTTCCAG 58.370 52.381 14.95 0.00 0.00 3.86
14 15 1.280133 CCAGATCTGTGCTTCCTTCCA 59.720 52.381 21.11 0.00 0.00 3.53
15 16 2.016096 GCCAGATCTGTGCTTCCTTCC 61.016 57.143 21.11 0.00 0.00 3.46
16 17 1.065564 AGCCAGATCTGTGCTTCCTTC 60.066 52.381 24.57 4.55 34.86 3.46
17 18 0.990374 AGCCAGATCTGTGCTTCCTT 59.010 50.000 24.57 9.75 34.86 3.36
18 19 1.484240 GTAGCCAGATCTGTGCTTCCT 59.516 52.381 30.83 17.08 37.89 3.36
19 20 1.474143 GGTAGCCAGATCTGTGCTTCC 60.474 57.143 30.83 29.71 37.26 3.46
20 21 1.208052 TGGTAGCCAGATCTGTGCTTC 59.792 52.381 30.83 26.65 37.89 3.86
21 22 1.279496 TGGTAGCCAGATCTGTGCTT 58.721 50.000 30.83 20.05 37.89 3.91
22 23 2.996985 TGGTAGCCAGATCTGTGCT 58.003 52.632 29.47 29.47 39.33 4.40
32 33 1.990060 GCTCTGGTCCTGGTAGCCA 60.990 63.158 0.00 0.53 0.00 4.75
33 34 1.965754 CTGCTCTGGTCCTGGTAGCC 61.966 65.000 6.90 0.00 32.14 3.93
34 35 1.519719 CTGCTCTGGTCCTGGTAGC 59.480 63.158 0.00 3.29 0.00 3.58
35 36 1.260538 TGCTGCTCTGGTCCTGGTAG 61.261 60.000 0.00 0.00 0.00 3.18
36 37 1.229177 TGCTGCTCTGGTCCTGGTA 60.229 57.895 0.00 0.00 0.00 3.25
37 38 2.527624 TGCTGCTCTGGTCCTGGT 60.528 61.111 0.00 0.00 0.00 4.00
38 39 2.268280 CTGCTGCTCTGGTCCTGG 59.732 66.667 0.00 0.00 0.00 4.45
39 40 2.268280 CCTGCTGCTCTGGTCCTG 59.732 66.667 0.00 0.00 0.00 3.86
40 41 3.007920 CCCTGCTGCTCTGGTCCT 61.008 66.667 0.00 0.00 32.38 3.85
41 42 4.106925 CCCCTGCTGCTCTGGTCC 62.107 72.222 0.00 0.00 32.38 4.46
42 43 4.792804 GCCCCTGCTGCTCTGGTC 62.793 72.222 0.00 0.00 32.38 4.02
63 64 3.228017 GAGCTCCCTAGGCCCGTC 61.228 72.222 2.05 0.00 0.00 4.79
64 65 3.618855 TTGAGCTCCCTAGGCCCGT 62.619 63.158 12.15 0.00 0.00 5.28
65 66 2.764128 TTGAGCTCCCTAGGCCCG 60.764 66.667 12.15 0.00 0.00 6.13
66 67 2.447714 CCTTGAGCTCCCTAGGCCC 61.448 68.421 12.15 0.00 0.00 5.80
67 68 2.447714 CCCTTGAGCTCCCTAGGCC 61.448 68.421 12.15 0.00 0.00 5.19
68 69 2.447714 CCCCTTGAGCTCCCTAGGC 61.448 68.421 12.15 0.00 0.00 3.93
69 70 1.768077 CCCCCTTGAGCTCCCTAGG 60.768 68.421 12.15 14.55 0.00 3.02
70 71 2.447714 GCCCCCTTGAGCTCCCTAG 61.448 68.421 12.15 5.96 0.00 3.02
71 72 2.366972 GCCCCCTTGAGCTCCCTA 60.367 66.667 12.15 0.00 0.00 3.53
78 79 4.729918 AAGCTGCGCCCCCTTGAG 62.730 66.667 4.18 0.00 0.00 3.02
79 80 4.722700 GAAGCTGCGCCCCCTTGA 62.723 66.667 4.18 0.00 0.00 3.02
93 94 1.449246 CTCCTGCAAGCTCCGGAAG 60.449 63.158 5.23 0.00 0.00 3.46
94 95 1.913262 TCTCCTGCAAGCTCCGGAA 60.913 57.895 5.23 0.00 0.00 4.30
95 96 2.283894 TCTCCTGCAAGCTCCGGA 60.284 61.111 2.93 2.93 0.00 5.14
96 97 2.125350 GTCTCCTGCAAGCTCCGG 60.125 66.667 0.00 0.00 0.00 5.14
97 98 2.492449 TTCGTCTCCTGCAAGCTCCG 62.492 60.000 0.00 0.00 0.00 4.63
98 99 0.739112 CTTCGTCTCCTGCAAGCTCC 60.739 60.000 0.00 0.00 0.00 4.70
99 100 0.244994 TCTTCGTCTCCTGCAAGCTC 59.755 55.000 0.00 0.00 0.00 4.09
100 101 0.901124 ATCTTCGTCTCCTGCAAGCT 59.099 50.000 0.00 0.00 0.00 3.74
101 102 1.005340 CATCTTCGTCTCCTGCAAGC 58.995 55.000 0.00 0.00 0.00 4.01
102 103 1.005340 GCATCTTCGTCTCCTGCAAG 58.995 55.000 0.00 0.00 33.13 4.01
103 104 0.321346 TGCATCTTCGTCTCCTGCAA 59.679 50.000 0.00 0.00 39.68 4.08
104 105 0.390340 GTGCATCTTCGTCTCCTGCA 60.390 55.000 0.00 0.00 40.29 4.41
105 106 1.086634 GGTGCATCTTCGTCTCCTGC 61.087 60.000 0.00 0.00 0.00 4.85
106 107 0.803768 CGGTGCATCTTCGTCTCCTG 60.804 60.000 0.00 0.00 0.00 3.86
107 108 1.513158 CGGTGCATCTTCGTCTCCT 59.487 57.895 0.00 0.00 0.00 3.69
108 109 1.519455 CCGGTGCATCTTCGTCTCC 60.519 63.158 0.00 0.00 0.00 3.71
109 110 1.519455 CCCGGTGCATCTTCGTCTC 60.519 63.158 0.00 0.00 0.00 3.36
110 111 1.330655 ATCCCGGTGCATCTTCGTCT 61.331 55.000 0.00 0.00 0.00 4.18
111 112 1.144057 ATCCCGGTGCATCTTCGTC 59.856 57.895 0.00 0.00 0.00 4.20
112 113 1.153369 CATCCCGGTGCATCTTCGT 60.153 57.895 0.00 0.00 0.00 3.85
113 114 1.889105 CCATCCCGGTGCATCTTCG 60.889 63.158 0.00 0.00 0.00 3.79
114 115 1.526917 CCCATCCCGGTGCATCTTC 60.527 63.158 0.00 0.00 0.00 2.87
115 116 2.308722 ACCCATCCCGGTGCATCTT 61.309 57.895 0.00 0.00 33.77 2.40
116 117 2.692368 ACCCATCCCGGTGCATCT 60.692 61.111 0.00 0.00 33.77 2.90
117 118 2.516930 CACCCATCCCGGTGCATC 60.517 66.667 0.00 0.00 46.52 3.91
122 123 2.530661 TTGGTCACCCATCCCGGT 60.531 61.111 0.00 0.00 41.49 5.28
123 124 2.045340 GTTGGTCACCCATCCCGG 60.045 66.667 0.00 0.00 41.49 5.73
124 125 2.045340 GGTTGGTCACCCATCCCG 60.045 66.667 0.00 0.00 42.61 5.14
125 126 0.611896 CTTGGTTGGTCACCCATCCC 60.612 60.000 0.00 0.03 46.30 3.85
126 127 0.611896 CCTTGGTTGGTCACCCATCC 60.612 60.000 0.00 2.48 46.68 3.51
127 128 0.611896 CCCTTGGTTGGTCACCCATC 60.612 60.000 0.00 0.00 46.68 3.51
128 129 1.071314 TCCCTTGGTTGGTCACCCAT 61.071 55.000 0.00 0.00 46.68 4.00
129 130 1.698116 TCCCTTGGTTGGTCACCCA 60.698 57.895 0.00 0.00 46.68 4.51
130 131 1.228459 GTCCCTTGGTTGGTCACCC 60.228 63.158 0.00 0.00 46.68 4.61
132 133 1.599797 CGGTCCCTTGGTTGGTCAC 60.600 63.158 0.00 0.00 0.00 3.67
133 134 2.833227 CGGTCCCTTGGTTGGTCA 59.167 61.111 0.00 0.00 0.00 4.02
134 135 2.671963 GCGGTCCCTTGGTTGGTC 60.672 66.667 0.00 0.00 0.00 4.02
135 136 2.840753 ATGCGGTCCCTTGGTTGGT 61.841 57.895 0.00 0.00 0.00 3.67
136 137 2.035626 ATGCGGTCCCTTGGTTGG 59.964 61.111 0.00 0.00 0.00 3.77
137 138 2.342650 CCATGCGGTCCCTTGGTTG 61.343 63.158 0.00 0.00 0.00 3.77
138 139 2.035626 CCATGCGGTCCCTTGGTT 59.964 61.111 0.00 0.00 0.00 3.67
139 140 3.256960 ACCATGCGGTCCCTTGGT 61.257 61.111 10.40 10.40 44.71 3.67
140 141 2.556840 ATCACCATGCGGTCCCTTGG 62.557 60.000 9.44 9.44 44.71 3.61
141 142 1.077501 ATCACCATGCGGTCCCTTG 60.078 57.895 0.00 0.00 44.71 3.61
142 143 1.077501 CATCACCATGCGGTCCCTT 60.078 57.895 0.00 0.00 44.71 3.95
143 144 2.591753 CATCACCATGCGGTCCCT 59.408 61.111 0.00 0.00 44.71 4.20
144 145 2.516930 CCATCACCATGCGGTCCC 60.517 66.667 0.00 0.00 44.71 4.46
145 146 1.524621 CTCCATCACCATGCGGTCC 60.525 63.158 0.00 0.00 44.71 4.46
146 147 1.524621 CCTCCATCACCATGCGGTC 60.525 63.158 0.00 0.00 44.71 4.79
148 149 1.820906 CACCTCCATCACCATGCGG 60.821 63.158 0.00 0.00 38.77 5.69
149 150 2.475466 GCACCTCCATCACCATGCG 61.475 63.158 0.00 0.00 0.00 4.73
150 151 2.475466 CGCACCTCCATCACCATGC 61.475 63.158 0.00 0.00 0.00 4.06
151 152 2.475466 GCGCACCTCCATCACCATG 61.475 63.158 0.30 0.00 0.00 3.66
152 153 2.124570 GCGCACCTCCATCACCAT 60.125 61.111 0.30 0.00 0.00 3.55
153 154 1.621672 TATGCGCACCTCCATCACCA 61.622 55.000 14.90 0.00 0.00 4.17
154 155 0.250467 ATATGCGCACCTCCATCACC 60.250 55.000 14.90 0.00 0.00 4.02
155 156 0.870393 CATATGCGCACCTCCATCAC 59.130 55.000 14.90 0.00 0.00 3.06
156 157 0.886043 GCATATGCGCACCTCCATCA 60.886 55.000 14.90 0.00 0.00 3.07
157 158 1.580845 GGCATATGCGCACCTCCATC 61.581 60.000 21.04 0.00 43.26 3.51
158 159 1.601759 GGCATATGCGCACCTCCAT 60.602 57.895 21.04 0.00 43.26 3.41
159 160 2.203195 GGCATATGCGCACCTCCA 60.203 61.111 21.04 0.00 43.26 3.86
160 161 3.349006 CGGCATATGCGCACCTCC 61.349 66.667 21.04 11.11 43.26 4.30
161 162 2.280119 TCGGCATATGCGCACCTC 60.280 61.111 21.04 1.65 43.26 3.85
162 163 2.280389 CTCGGCATATGCGCACCT 60.280 61.111 21.04 0.00 43.26 4.00
163 164 3.349006 CCTCGGCATATGCGCACC 61.349 66.667 21.04 8.81 43.26 5.01
164 165 2.280119 TCCTCGGCATATGCGCAC 60.280 61.111 21.04 6.97 43.26 5.34
165 166 2.029518 CTCCTCGGCATATGCGCA 59.970 61.111 21.04 14.96 43.26 6.09
166 167 3.418068 GCTCCTCGGCATATGCGC 61.418 66.667 21.04 13.68 43.26 6.09
167 168 2.740055 GGCTCCTCGGCATATGCG 60.740 66.667 21.04 15.85 43.26 4.73
168 169 2.427320 TGGCTCCTCGGCATATGC 59.573 61.111 19.79 19.79 44.12 3.14
174 175 2.899339 GCTCATTGGCTCCTCGGC 60.899 66.667 0.00 0.00 38.97 5.54
175 176 2.203126 GGCTCATTGGCTCCTCGG 60.203 66.667 0.00 0.00 38.32 4.63
176 177 1.078214 TTGGCTCATTGGCTCCTCG 60.078 57.895 0.00 0.00 42.34 4.63
177 178 0.750911 CCTTGGCTCATTGGCTCCTC 60.751 60.000 0.00 0.00 42.34 3.71
178 179 1.305623 CCTTGGCTCATTGGCTCCT 59.694 57.895 0.00 0.00 42.34 3.69
179 180 1.755783 CCCTTGGCTCATTGGCTCC 60.756 63.158 0.00 0.00 42.34 4.70
180 181 1.755783 CCCCTTGGCTCATTGGCTC 60.756 63.158 0.00 0.00 42.34 4.70
181 182 2.361771 CCCCTTGGCTCATTGGCT 59.638 61.111 0.00 0.00 42.34 4.75
182 183 2.761213 CCCCCTTGGCTCATTGGC 60.761 66.667 0.00 0.00 42.18 4.52
183 184 1.380380 GACCCCCTTGGCTCATTGG 60.380 63.158 0.00 0.00 37.83 3.16
184 185 1.750399 CGACCCCCTTGGCTCATTG 60.750 63.158 0.00 0.00 37.83 2.82
185 186 2.677228 CGACCCCCTTGGCTCATT 59.323 61.111 0.00 0.00 37.83 2.57
186 187 3.411517 CCGACCCCCTTGGCTCAT 61.412 66.667 0.00 0.00 37.83 2.90
187 188 4.649705 TCCGACCCCCTTGGCTCA 62.650 66.667 0.00 0.00 37.83 4.26
188 189 2.821679 CTTTCCGACCCCCTTGGCTC 62.822 65.000 0.00 0.00 37.83 4.70
189 190 2.856988 TTTCCGACCCCCTTGGCT 60.857 61.111 0.00 0.00 37.83 4.75
190 191 2.361230 CTTTCCGACCCCCTTGGC 60.361 66.667 0.00 0.00 37.83 4.52
191 192 1.198759 TCTCTTTCCGACCCCCTTGG 61.199 60.000 0.00 0.00 41.37 3.61
192 193 0.250513 CTCTCTTTCCGACCCCCTTG 59.749 60.000 0.00 0.00 0.00 3.61
193 194 1.554583 GCTCTCTTTCCGACCCCCTT 61.555 60.000 0.00 0.00 0.00 3.95
194 195 1.990614 GCTCTCTTTCCGACCCCCT 60.991 63.158 0.00 0.00 0.00 4.79
195 196 1.838073 TTGCTCTCTTTCCGACCCCC 61.838 60.000 0.00 0.00 0.00 5.40
196 197 0.673956 GTTGCTCTCTTTCCGACCCC 60.674 60.000 0.00 0.00 0.00 4.95
197 198 0.321996 AGTTGCTCTCTTTCCGACCC 59.678 55.000 0.00 0.00 0.00 4.46
198 199 1.673329 GGAGTTGCTCTCTTTCCGACC 60.673 57.143 8.78 0.00 42.40 4.79
199 200 1.673329 GGGAGTTGCTCTCTTTCCGAC 60.673 57.143 8.78 0.00 42.40 4.79
200 201 0.608640 GGGAGTTGCTCTCTTTCCGA 59.391 55.000 8.78 0.00 42.40 4.55
201 202 0.737715 CGGGAGTTGCTCTCTTTCCG 60.738 60.000 8.78 9.20 42.40 4.30
202 203 0.321996 ACGGGAGTTGCTCTCTTTCC 59.678 55.000 8.78 2.77 43.33 3.13
203 204 1.433534 CACGGGAGTTGCTCTCTTTC 58.566 55.000 8.78 1.16 44.67 2.62
204 205 0.035458 CCACGGGAGTTGCTCTCTTT 59.965 55.000 8.78 0.00 44.67 2.52
205 206 1.674057 CCACGGGAGTTGCTCTCTT 59.326 57.895 8.78 0.00 44.67 2.85
206 207 2.948720 GCCACGGGAGTTGCTCTCT 61.949 63.158 8.78 0.00 46.84 3.10
207 208 2.435059 GCCACGGGAGTTGCTCTC 60.435 66.667 0.00 1.79 46.84 3.20
212 213 3.365265 GGCAAGCCACGGGAGTTG 61.365 66.667 6.14 0.00 44.67 3.16
220 221 2.420466 CTTTGGAACCGGCAAGCCAC 62.420 60.000 12.19 0.00 35.37 5.01
221 222 2.123683 TTTGGAACCGGCAAGCCA 60.124 55.556 12.19 0.25 35.37 4.75
222 223 2.650778 CTTTGGAACCGGCAAGCC 59.349 61.111 0.00 0.00 0.00 4.35
223 224 2.049156 GCTTTGGAACCGGCAAGC 60.049 61.111 0.00 4.14 35.23 4.01
224 225 2.650778 GGCTTTGGAACCGGCAAG 59.349 61.111 0.00 0.00 0.00 4.01
225 226 3.291383 CGGCTTTGGAACCGGCAA 61.291 61.111 0.00 0.00 45.74 4.52
230 231 4.084888 CGACGCGGCTTTGGAACC 62.085 66.667 11.76 0.00 0.00 3.62
231 232 4.084888 CCGACGCGGCTTTGGAAC 62.085 66.667 11.76 0.00 41.17 3.62
249 250 3.266686 TTCCTGTGTCCATGGCCGG 62.267 63.158 6.96 0.00 0.00 6.13
250 251 1.746615 CTTCCTGTGTCCATGGCCG 60.747 63.158 6.96 0.00 0.00 6.13
251 252 0.618458 TACTTCCTGTGTCCATGGCC 59.382 55.000 6.96 0.00 0.00 5.36
252 253 1.739067 GTACTTCCTGTGTCCATGGC 58.261 55.000 6.96 2.72 0.00 4.40
253 254 1.548719 TCGTACTTCCTGTGTCCATGG 59.451 52.381 4.97 4.97 0.00 3.66
254 255 2.607187 GTCGTACTTCCTGTGTCCATG 58.393 52.381 0.00 0.00 0.00 3.66
255 256 1.549170 GGTCGTACTTCCTGTGTCCAT 59.451 52.381 0.00 0.00 0.00 3.41
256 257 0.963962 GGTCGTACTTCCTGTGTCCA 59.036 55.000 0.00 0.00 0.00 4.02
257 258 0.245813 GGGTCGTACTTCCTGTGTCC 59.754 60.000 0.00 0.00 0.00 4.02
258 259 0.245813 GGGGTCGTACTTCCTGTGTC 59.754 60.000 0.00 0.00 0.00 3.67
259 260 1.530013 CGGGGTCGTACTTCCTGTGT 61.530 60.000 0.00 0.00 0.00 3.72
260 261 1.214589 CGGGGTCGTACTTCCTGTG 59.785 63.158 0.00 0.00 0.00 3.66
261 262 3.690745 CGGGGTCGTACTTCCTGT 58.309 61.111 0.00 0.00 0.00 4.00
272 273 2.818274 GATGGCAACGACGGGGTC 60.818 66.667 0.00 0.00 42.51 4.46
273 274 4.404098 GGATGGCAACGACGGGGT 62.404 66.667 0.00 0.00 42.51 4.95
274 275 3.622060 AAGGATGGCAACGACGGGG 62.622 63.158 0.00 0.00 42.51 5.73
275 276 2.046314 AAGGATGGCAACGACGGG 60.046 61.111 0.00 0.00 42.51 5.28
276 277 2.398554 CCAAGGATGGCAACGACGG 61.399 63.158 0.00 0.00 40.58 4.79
277 278 3.177600 CCAAGGATGGCAACGACG 58.822 61.111 0.00 0.00 40.58 5.12
342 343 4.351054 CACCCACCCCTCACCTGC 62.351 72.222 0.00 0.00 0.00 4.85
343 344 4.351054 GCACCCACCCCTCACCTG 62.351 72.222 0.00 0.00 0.00 4.00
346 347 4.351054 CTGGCACCCACCCCTCAC 62.351 72.222 0.00 0.00 0.00 3.51
360 361 3.417275 CTAGCCACTCGCGACCTGG 62.417 68.421 19.62 19.62 44.76 4.45
361 362 2.103143 CTAGCCACTCGCGACCTG 59.897 66.667 3.71 2.99 44.76 4.00
362 363 3.141488 CCTAGCCACTCGCGACCT 61.141 66.667 3.71 1.63 44.76 3.85
363 364 2.502692 AAACCTAGCCACTCGCGACC 62.503 60.000 3.71 0.00 44.76 4.79
364 365 1.077089 GAAACCTAGCCACTCGCGAC 61.077 60.000 3.71 0.00 44.76 5.19
365 366 1.214589 GAAACCTAGCCACTCGCGA 59.785 57.895 9.26 9.26 44.76 5.87
366 367 1.810030 GGAAACCTAGCCACTCGCG 60.810 63.158 0.00 0.00 44.76 5.87
367 368 4.203618 GGAAACCTAGCCACTCGC 57.796 61.111 0.00 0.00 37.98 5.03
379 380 2.046217 GGGCGACTCAGGGGAAAC 60.046 66.667 0.00 0.00 0.00 2.78
380 381 3.702048 CGGGCGACTCAGGGGAAA 61.702 66.667 0.00 0.00 0.00 3.13
406 407 2.772622 ATCCCCGACCCCCATGTC 60.773 66.667 0.00 0.00 0.00 3.06
407 408 2.772622 GATCCCCGACCCCCATGT 60.773 66.667 0.00 0.00 0.00 3.21
408 409 3.941188 CGATCCCCGACCCCCATG 61.941 72.222 0.00 0.00 41.76 3.66
415 416 1.963464 TTAAGTGGCCGATCCCCGAC 61.963 60.000 0.00 0.00 41.76 4.79
416 417 1.266160 TTTAAGTGGCCGATCCCCGA 61.266 55.000 0.00 0.00 41.76 5.14
417 418 0.814010 CTTTAAGTGGCCGATCCCCG 60.814 60.000 0.00 0.00 38.18 5.73
418 419 0.544697 TCTTTAAGTGGCCGATCCCC 59.455 55.000 0.00 0.00 0.00 4.81
419 420 1.485066 TCTCTTTAAGTGGCCGATCCC 59.515 52.381 0.00 0.00 0.00 3.85
420 421 2.981859 TCTCTTTAAGTGGCCGATCC 57.018 50.000 0.00 0.00 0.00 3.36
421 422 4.442706 TCAATCTCTTTAAGTGGCCGATC 58.557 43.478 0.00 0.00 0.00 3.69
422 423 4.487714 TCAATCTCTTTAAGTGGCCGAT 57.512 40.909 0.00 0.00 0.00 4.18
423 424 3.973206 TCAATCTCTTTAAGTGGCCGA 57.027 42.857 0.00 0.00 0.00 5.54
424 425 5.360591 ACTATCAATCTCTTTAAGTGGCCG 58.639 41.667 0.00 0.00 0.00 6.13
425 426 6.038714 CCAACTATCAATCTCTTTAAGTGGCC 59.961 42.308 0.00 0.00 0.00 5.36
426 427 6.038714 CCCAACTATCAATCTCTTTAAGTGGC 59.961 42.308 0.00 0.00 0.00 5.01
427 428 7.066284 CACCCAACTATCAATCTCTTTAAGTGG 59.934 40.741 0.00 0.00 0.00 4.00
428 429 7.824289 TCACCCAACTATCAATCTCTTTAAGTG 59.176 37.037 0.00 0.00 0.00 3.16
429 430 7.824779 GTCACCCAACTATCAATCTCTTTAAGT 59.175 37.037 0.00 0.00 0.00 2.24
430 431 7.010552 CGTCACCCAACTATCAATCTCTTTAAG 59.989 40.741 0.00 0.00 0.00 1.85
431 432 6.816640 CGTCACCCAACTATCAATCTCTTTAA 59.183 38.462 0.00 0.00 0.00 1.52
432 433 6.338146 CGTCACCCAACTATCAATCTCTTTA 58.662 40.000 0.00 0.00 0.00 1.85
433 434 5.178797 CGTCACCCAACTATCAATCTCTTT 58.821 41.667 0.00 0.00 0.00 2.52
434 435 4.383118 CCGTCACCCAACTATCAATCTCTT 60.383 45.833 0.00 0.00 0.00 2.85
435 436 3.133003 CCGTCACCCAACTATCAATCTCT 59.867 47.826 0.00 0.00 0.00 3.10
436 437 3.458189 CCGTCACCCAACTATCAATCTC 58.542 50.000 0.00 0.00 0.00 2.75
437 438 2.420129 GCCGTCACCCAACTATCAATCT 60.420 50.000 0.00 0.00 0.00 2.40
438 439 1.940613 GCCGTCACCCAACTATCAATC 59.059 52.381 0.00 0.00 0.00 2.67
439 440 1.280710 TGCCGTCACCCAACTATCAAT 59.719 47.619 0.00 0.00 0.00 2.57
440 441 0.687920 TGCCGTCACCCAACTATCAA 59.312 50.000 0.00 0.00 0.00 2.57
441 442 0.908910 ATGCCGTCACCCAACTATCA 59.091 50.000 0.00 0.00 0.00 2.15
442 443 2.548067 CCTATGCCGTCACCCAACTATC 60.548 54.545 0.00 0.00 0.00 2.08
443 444 1.416401 CCTATGCCGTCACCCAACTAT 59.584 52.381 0.00 0.00 0.00 2.12
444 445 0.828022 CCTATGCCGTCACCCAACTA 59.172 55.000 0.00 0.00 0.00 2.24
445 446 1.198759 ACCTATGCCGTCACCCAACT 61.199 55.000 0.00 0.00 0.00 3.16
446 447 0.322187 AACCTATGCCGTCACCCAAC 60.322 55.000 0.00 0.00 0.00 3.77
447 448 1.277579 TAACCTATGCCGTCACCCAA 58.722 50.000 0.00 0.00 0.00 4.12
448 449 1.140052 CATAACCTATGCCGTCACCCA 59.860 52.381 0.00 0.00 0.00 4.51
449 450 1.878953 CATAACCTATGCCGTCACCC 58.121 55.000 0.00 0.00 0.00 4.61
458 459 8.846943 TGTAGATGGTTTATGCATAACCTATG 57.153 34.615 25.34 0.00 44.32 2.23
459 460 9.507329 CTTGTAGATGGTTTATGCATAACCTAT 57.493 33.333 25.34 19.98 44.32 2.57
460 461 7.936847 CCTTGTAGATGGTTTATGCATAACCTA 59.063 37.037 25.34 16.99 44.32 3.08
461 462 6.772716 CCTTGTAGATGGTTTATGCATAACCT 59.227 38.462 25.34 17.28 44.32 3.50
462 463 6.515035 GCCTTGTAGATGGTTTATGCATAACC 60.515 42.308 18.70 20.50 44.28 2.85
463 464 6.039270 TGCCTTGTAGATGGTTTATGCATAAC 59.961 38.462 18.70 13.15 0.00 1.89
464 465 6.125719 TGCCTTGTAGATGGTTTATGCATAA 58.874 36.000 15.21 15.21 0.00 1.90
465 466 5.689835 TGCCTTGTAGATGGTTTATGCATA 58.310 37.500 1.16 1.16 0.00 3.14
466 467 4.535781 TGCCTTGTAGATGGTTTATGCAT 58.464 39.130 3.79 3.79 0.00 3.96
467 468 3.947196 CTGCCTTGTAGATGGTTTATGCA 59.053 43.478 0.00 0.00 0.00 3.96
468 469 3.243201 GCTGCCTTGTAGATGGTTTATGC 60.243 47.826 0.00 0.00 0.00 3.14
469 470 3.947196 TGCTGCCTTGTAGATGGTTTATG 59.053 43.478 0.00 0.00 0.00 1.90
470 471 3.947834 GTGCTGCCTTGTAGATGGTTTAT 59.052 43.478 0.00 0.00 0.00 1.40
471 472 3.009033 AGTGCTGCCTTGTAGATGGTTTA 59.991 43.478 0.00 0.00 0.00 2.01
472 473 2.162681 GTGCTGCCTTGTAGATGGTTT 58.837 47.619 0.00 0.00 0.00 3.27
473 474 1.352352 AGTGCTGCCTTGTAGATGGTT 59.648 47.619 0.00 0.00 0.00 3.67
474 475 0.987294 AGTGCTGCCTTGTAGATGGT 59.013 50.000 0.00 0.00 0.00 3.55
475 476 2.831333 CTAGTGCTGCCTTGTAGATGG 58.169 52.381 0.00 0.00 0.00 3.51
476 477 2.208431 GCTAGTGCTGCCTTGTAGATG 58.792 52.381 0.00 0.00 36.03 2.90
477 478 1.833630 TGCTAGTGCTGCCTTGTAGAT 59.166 47.619 0.00 0.00 40.48 1.98
478 479 1.266178 TGCTAGTGCTGCCTTGTAGA 58.734 50.000 0.00 0.00 40.48 2.59
479 480 2.005451 CTTGCTAGTGCTGCCTTGTAG 58.995 52.381 0.00 0.00 40.48 2.74
480 481 1.623311 TCTTGCTAGTGCTGCCTTGTA 59.377 47.619 0.00 0.00 40.48 2.41
481 482 0.397941 TCTTGCTAGTGCTGCCTTGT 59.602 50.000 0.00 0.00 40.48 3.16
482 483 0.801251 GTCTTGCTAGTGCTGCCTTG 59.199 55.000 0.00 0.00 40.48 3.61
483 484 0.397941 TGTCTTGCTAGTGCTGCCTT 59.602 50.000 0.00 0.00 40.48 4.35
484 485 0.397941 TTGTCTTGCTAGTGCTGCCT 59.602 50.000 0.00 0.00 40.48 4.75
485 486 0.519077 GTTGTCTTGCTAGTGCTGCC 59.481 55.000 0.00 0.00 40.48 4.85
486 487 1.229428 TGTTGTCTTGCTAGTGCTGC 58.771 50.000 0.00 0.00 40.48 5.25
487 488 3.969117 TTTGTTGTCTTGCTAGTGCTG 57.031 42.857 0.00 0.00 40.48 4.41
488 489 4.697352 CCTATTTGTTGTCTTGCTAGTGCT 59.303 41.667 0.00 0.00 40.48 4.40
489 490 4.672801 GCCTATTTGTTGTCTTGCTAGTGC 60.673 45.833 0.00 0.00 40.20 4.40
490 491 4.455533 TGCCTATTTGTTGTCTTGCTAGTG 59.544 41.667 0.00 0.00 0.00 2.74
491 492 4.651778 TGCCTATTTGTTGTCTTGCTAGT 58.348 39.130 0.00 0.00 0.00 2.57
492 493 5.627499 TTGCCTATTTGTTGTCTTGCTAG 57.373 39.130 0.00 0.00 0.00 3.42
493 494 6.588719 ATTTGCCTATTTGTTGTCTTGCTA 57.411 33.333 0.00 0.00 0.00 3.49
494 495 4.935352 TTTGCCTATTTGTTGTCTTGCT 57.065 36.364 0.00 0.00 0.00 3.91
495 496 5.695816 TGAATTTGCCTATTTGTTGTCTTGC 59.304 36.000 0.00 0.00 0.00 4.01
496 497 7.712264 TTGAATTTGCCTATTTGTTGTCTTG 57.288 32.000 0.00 0.00 0.00 3.02
497 498 7.986889 AGTTTGAATTTGCCTATTTGTTGTCTT 59.013 29.630 0.00 0.00 0.00 3.01
498 499 7.500141 AGTTTGAATTTGCCTATTTGTTGTCT 58.500 30.769 0.00 0.00 0.00 3.41
499 500 7.713764 AGTTTGAATTTGCCTATTTGTTGTC 57.286 32.000 0.00 0.00 0.00 3.18
500 501 8.397148 CAAAGTTTGAATTTGCCTATTTGTTGT 58.603 29.630 10.19 0.00 31.46 3.32
501 502 7.856894 CCAAAGTTTGAATTTGCCTATTTGTTG 59.143 33.333 17.33 0.00 36.52 3.33
502 503 7.013178 CCCAAAGTTTGAATTTGCCTATTTGTT 59.987 33.333 17.33 0.00 36.52 2.83
503 504 6.486320 CCCAAAGTTTGAATTTGCCTATTTGT 59.514 34.615 17.33 0.00 36.52 2.83
504 505 6.486320 ACCCAAAGTTTGAATTTGCCTATTTG 59.514 34.615 17.33 0.00 36.52 2.32
505 506 6.600388 ACCCAAAGTTTGAATTTGCCTATTT 58.400 32.000 17.33 0.00 36.52 1.40
506 507 6.186420 ACCCAAAGTTTGAATTTGCCTATT 57.814 33.333 17.33 0.00 36.52 1.73
507 508 5.823861 ACCCAAAGTTTGAATTTGCCTAT 57.176 34.783 17.33 0.00 36.52 2.57
508 509 6.517605 GTTACCCAAAGTTTGAATTTGCCTA 58.482 36.000 17.33 0.00 36.52 3.93
509 510 5.364778 GTTACCCAAAGTTTGAATTTGCCT 58.635 37.500 17.33 0.00 36.52 4.75
510 511 4.210328 CGTTACCCAAAGTTTGAATTTGCC 59.790 41.667 17.33 0.00 36.52 4.52
511 512 4.318475 GCGTTACCCAAAGTTTGAATTTGC 60.318 41.667 17.33 9.49 36.52 3.68
512 513 5.047188 AGCGTTACCCAAAGTTTGAATTTG 58.953 37.500 17.33 0.00 37.39 2.32
513 514 5.270893 AGCGTTACCCAAAGTTTGAATTT 57.729 34.783 17.33 0.93 0.00 1.82
514 515 4.929819 AGCGTTACCCAAAGTTTGAATT 57.070 36.364 17.33 3.32 0.00 2.17
515 516 4.929819 AAGCGTTACCCAAAGTTTGAAT 57.070 36.364 17.33 6.96 0.00 2.57
516 517 4.082136 ACAAAGCGTTACCCAAAGTTTGAA 60.082 37.500 17.33 0.64 0.00 2.69
517 518 3.444388 ACAAAGCGTTACCCAAAGTTTGA 59.556 39.130 17.33 0.00 0.00 2.69
518 519 3.776340 ACAAAGCGTTACCCAAAGTTTG 58.224 40.909 8.73 8.73 0.00 2.93
519 520 5.299782 TCATACAAAGCGTTACCCAAAGTTT 59.700 36.000 0.00 0.00 0.00 2.66
520 521 4.822896 TCATACAAAGCGTTACCCAAAGTT 59.177 37.500 0.00 0.00 0.00 2.66
521 522 4.391155 TCATACAAAGCGTTACCCAAAGT 58.609 39.130 0.00 0.00 0.00 2.66
522 523 4.693566 TCTCATACAAAGCGTTACCCAAAG 59.306 41.667 0.00 0.00 0.00 2.77
523 524 4.643463 TCTCATACAAAGCGTTACCCAAA 58.357 39.130 0.00 0.00 0.00 3.28
524 525 4.274602 TCTCATACAAAGCGTTACCCAA 57.725 40.909 0.00 0.00 0.00 4.12
525 526 3.965379 TCTCATACAAAGCGTTACCCA 57.035 42.857 0.00 0.00 0.00 4.51
526 527 5.616488 TTTTCTCATACAAAGCGTTACCC 57.384 39.130 0.00 0.00 0.00 3.69
527 528 6.464834 CGAATTTTCTCATACAAAGCGTTACC 59.535 38.462 0.00 0.00 0.00 2.85
528 529 6.022484 GCGAATTTTCTCATACAAAGCGTTAC 60.022 38.462 0.00 0.00 0.00 2.50
529 530 6.019152 GCGAATTTTCTCATACAAAGCGTTA 58.981 36.000 0.00 0.00 0.00 3.18
530 531 4.851558 GCGAATTTTCTCATACAAAGCGTT 59.148 37.500 0.00 0.00 0.00 4.84
531 532 4.403453 GCGAATTTTCTCATACAAAGCGT 58.597 39.130 0.00 0.00 0.00 5.07
532 533 3.786048 GGCGAATTTTCTCATACAAAGCG 59.214 43.478 0.00 0.00 0.00 4.68
533 534 4.105486 GGGCGAATTTTCTCATACAAAGC 58.895 43.478 0.00 0.00 0.00 3.51
534 535 4.142687 ACGGGCGAATTTTCTCATACAAAG 60.143 41.667 0.00 0.00 0.00 2.77
535 536 3.754323 ACGGGCGAATTTTCTCATACAAA 59.246 39.130 0.00 0.00 0.00 2.83
536 537 3.340034 ACGGGCGAATTTTCTCATACAA 58.660 40.909 0.00 0.00 0.00 2.41
537 538 2.933906 GACGGGCGAATTTTCTCATACA 59.066 45.455 0.00 0.00 0.00 2.29
538 539 2.034001 CGACGGGCGAATTTTCTCATAC 60.034 50.000 0.00 0.00 44.57 2.39
539 540 2.198406 CGACGGGCGAATTTTCTCATA 58.802 47.619 0.00 0.00 44.57 2.15
540 541 1.006832 CGACGGGCGAATTTTCTCAT 58.993 50.000 0.00 0.00 44.57 2.90
541 542 0.320073 ACGACGGGCGAATTTTCTCA 60.320 50.000 11.73 0.00 44.57 3.27
542 543 0.094730 CACGACGGGCGAATTTTCTC 59.905 55.000 11.73 0.00 44.57 2.87
543 544 1.908066 GCACGACGGGCGAATTTTCT 61.908 55.000 11.73 0.00 44.57 2.52
544 545 1.511254 GCACGACGGGCGAATTTTC 60.511 57.895 11.73 0.00 44.57 2.29
545 546 1.964373 AGCACGACGGGCGAATTTT 60.964 52.632 17.75 0.00 44.57 1.82
546 547 2.358247 AGCACGACGGGCGAATTT 60.358 55.556 17.75 0.00 44.57 1.82
547 548 3.118454 CAGCACGACGGGCGAATT 61.118 61.111 17.75 0.00 44.57 2.17
548 549 4.373116 ACAGCACGACGGGCGAAT 62.373 61.111 17.75 2.86 44.57 3.34
567 568 4.030452 GTGTTGACGGCCTGCAGC 62.030 66.667 8.66 3.68 42.60 5.25
568 569 0.673333 TATGTGTTGACGGCCTGCAG 60.673 55.000 6.78 6.78 0.00 4.41
569 570 0.250510 TTATGTGTTGACGGCCTGCA 60.251 50.000 0.00 0.00 0.00 4.41
570 571 0.878416 TTTATGTGTTGACGGCCTGC 59.122 50.000 0.00 0.00 0.00 4.85
571 572 3.242284 CGTATTTATGTGTTGACGGCCTG 60.242 47.826 0.00 0.00 0.00 4.85
572 573 2.933906 CGTATTTATGTGTTGACGGCCT 59.066 45.455 0.00 0.00 0.00 5.19
573 574 2.674357 ACGTATTTATGTGTTGACGGCC 59.326 45.455 0.00 0.00 34.72 6.13
574 575 4.085884 CAACGTATTTATGTGTTGACGGC 58.914 43.478 0.00 0.00 43.26 5.68
575 576 4.152759 ACCAACGTATTTATGTGTTGACGG 59.847 41.667 5.58 0.00 43.26 4.79
576 577 5.272167 ACCAACGTATTTATGTGTTGACG 57.728 39.130 5.58 0.00 43.26 4.35
577 578 5.341196 GCAACCAACGTATTTATGTGTTGAC 59.659 40.000 16.14 8.50 43.26 3.18
578 579 5.239744 AGCAACCAACGTATTTATGTGTTGA 59.760 36.000 16.14 0.00 43.26 3.18
579 580 5.341993 CAGCAACCAACGTATTTATGTGTTG 59.658 40.000 11.17 11.17 40.95 3.33
580 581 5.457140 CAGCAACCAACGTATTTATGTGTT 58.543 37.500 0.00 0.00 0.00 3.32
581 582 4.083003 CCAGCAACCAACGTATTTATGTGT 60.083 41.667 0.00 0.00 0.00 3.72
582 583 4.411327 CCAGCAACCAACGTATTTATGTG 58.589 43.478 0.00 0.00 0.00 3.21
583 584 3.119637 GCCAGCAACCAACGTATTTATGT 60.120 43.478 0.00 0.00 0.00 2.29
584 585 3.119673 TGCCAGCAACCAACGTATTTATG 60.120 43.478 0.00 0.00 0.00 1.90
585 586 3.085533 TGCCAGCAACCAACGTATTTAT 58.914 40.909 0.00 0.00 0.00 1.40
586 587 2.505405 TGCCAGCAACCAACGTATTTA 58.495 42.857 0.00 0.00 0.00 1.40
587 588 1.323412 TGCCAGCAACCAACGTATTT 58.677 45.000 0.00 0.00 0.00 1.40
588 589 1.269448 CTTGCCAGCAACCAACGTATT 59.731 47.619 0.00 0.00 0.00 1.89
589 590 0.881118 CTTGCCAGCAACCAACGTAT 59.119 50.000 0.00 0.00 0.00 3.06
590 591 0.179043 TCTTGCCAGCAACCAACGTA 60.179 50.000 0.00 0.00 0.00 3.57
591 592 1.447317 CTCTTGCCAGCAACCAACGT 61.447 55.000 0.00 0.00 0.00 3.99
592 593 1.283793 CTCTTGCCAGCAACCAACG 59.716 57.895 0.00 0.00 0.00 4.10
593 594 1.006922 GCTCTTGCCAGCAACCAAC 60.007 57.895 0.00 0.00 39.43 3.77
594 595 1.455402 TGCTCTTGCCAGCAACCAA 60.455 52.632 0.00 0.00 46.65 3.67
595 596 2.195411 TGCTCTTGCCAGCAACCA 59.805 55.556 0.00 0.00 46.65 3.67
600 601 1.445582 GTGCATTGCTCTTGCCAGC 60.446 57.895 10.49 0.00 39.39 4.85
601 602 1.214589 GGTGCATTGCTCTTGCCAG 59.785 57.895 10.49 0.00 39.39 4.85
602 603 2.628696 CGGTGCATTGCTCTTGCCA 61.629 57.895 10.49 0.00 39.39 4.92
603 604 1.305219 TACGGTGCATTGCTCTTGCC 61.305 55.000 10.49 3.89 39.39 4.52
604 605 0.734889 ATACGGTGCATTGCTCTTGC 59.265 50.000 10.49 0.02 40.55 4.01
605 606 2.463553 CATACGGTGCATTGCTCTTG 57.536 50.000 10.49 6.14 0.00 3.02
616 617 3.164576 CGTGTGGTGCATACGGTG 58.835 61.111 0.00 0.00 43.30 4.94
619 620 1.153726 TAGCCGTGTGGTGCATACG 60.154 57.895 0.00 0.00 45.77 3.06
620 621 0.390603 TGTAGCCGTGTGGTGCATAC 60.391 55.000 0.00 0.00 37.67 2.39
621 622 0.390603 GTGTAGCCGTGTGGTGCATA 60.391 55.000 0.00 0.00 39.29 3.14
622 623 1.671054 GTGTAGCCGTGTGGTGCAT 60.671 57.895 0.00 0.00 39.29 3.96
623 624 2.280524 GTGTAGCCGTGTGGTGCA 60.281 61.111 0.00 0.00 37.67 4.57
624 625 1.671054 ATGTGTAGCCGTGTGGTGC 60.671 57.895 0.00 0.00 37.67 5.01
625 626 0.602638 ACATGTGTAGCCGTGTGGTG 60.603 55.000 0.00 0.00 37.67 4.17
626 627 0.970640 TACATGTGTAGCCGTGTGGT 59.029 50.000 9.11 0.00 36.11 4.16
627 628 1.999735 CTTACATGTGTAGCCGTGTGG 59.000 52.381 9.11 0.00 36.11 4.17
628 629 1.393539 GCTTACATGTGTAGCCGTGTG 59.606 52.381 18.83 0.00 36.11 3.82
629 630 1.001520 TGCTTACATGTGTAGCCGTGT 59.998 47.619 23.74 0.00 38.16 4.49
630 631 1.393539 GTGCTTACATGTGTAGCCGTG 59.606 52.381 23.74 3.26 0.00 4.94
631 632 1.674817 GGTGCTTACATGTGTAGCCGT 60.675 52.381 23.74 0.00 0.00 5.68
632 633 1.006832 GGTGCTTACATGTGTAGCCG 58.993 55.000 23.74 3.80 0.00 5.52
633 634 1.006832 CGGTGCTTACATGTGTAGCC 58.993 55.000 23.74 17.19 0.00 3.93
634 635 1.393539 CACGGTGCTTACATGTGTAGC 59.606 52.381 21.37 21.37 33.03 3.58
635 636 1.999735 CCACGGTGCTTACATGTGTAG 59.000 52.381 9.11 7.02 34.80 2.74
636 637 1.942127 GCCACGGTGCTTACATGTGTA 60.942 52.381 9.11 0.00 34.80 2.90
637 638 1.234615 GCCACGGTGCTTACATGTGT 61.235 55.000 9.11 0.00 34.80 3.72
638 639 1.501741 GCCACGGTGCTTACATGTG 59.498 57.895 9.11 0.00 35.77 3.21
639 640 2.032634 CGCCACGGTGCTTACATGT 61.033 57.895 2.69 2.69 0.00 3.21
640 641 1.573829 AACGCCACGGTGCTTACATG 61.574 55.000 1.68 0.00 0.00 3.21
641 642 1.302192 AACGCCACGGTGCTTACAT 60.302 52.632 1.68 0.00 0.00 2.29
642 643 2.109387 AACGCCACGGTGCTTACA 59.891 55.556 1.68 0.00 0.00 2.41
643 644 2.554272 CAACGCCACGGTGCTTAC 59.446 61.111 1.68 0.00 37.86 2.34
660 661 5.048991 TGTCCATTCGGTTTAAAAGAGAAGC 60.049 40.000 0.00 0.00 0.00 3.86
666 667 4.477302 ACGTGTCCATTCGGTTTAAAAG 57.523 40.909 0.00 0.00 0.00 2.27
676 677 6.176975 TCATGAATGTTTACGTGTCCATTC 57.823 37.500 20.13 20.13 42.11 2.67
682 683 5.487433 TGATCCTCATGAATGTTTACGTGT 58.513 37.500 0.00 0.00 0.00 4.49
686 687 7.284034 ACCAGATTGATCCTCATGAATGTTTAC 59.716 37.037 0.00 0.00 0.00 2.01
688 689 6.192773 ACCAGATTGATCCTCATGAATGTTT 58.807 36.000 0.00 0.00 0.00 2.83
727 730 2.766313 TGCTGTTGTCGTTAGCTCATT 58.234 42.857 0.00 0.00 38.25 2.57
729 732 1.864711 GTTGCTGTTGTCGTTAGCTCA 59.135 47.619 0.00 0.00 38.25 4.26
730 733 1.136611 CGTTGCTGTTGTCGTTAGCTC 60.137 52.381 0.00 0.00 38.25 4.09
734 742 3.124560 TCATTCGTTGCTGTTGTCGTTA 58.875 40.909 0.00 0.00 0.00 3.18
737 745 2.661504 TTCATTCGTTGCTGTTGTCG 57.338 45.000 0.00 0.00 0.00 4.35
743 751 2.489329 ACCTGGATTTCATTCGTTGCTG 59.511 45.455 0.00 0.00 0.00 4.41
751 759 7.402054 TCACATAGTACAACCTGGATTTCATT 58.598 34.615 0.00 0.00 0.00 2.57
757 765 6.121776 TGTTTCACATAGTACAACCTGGAT 57.878 37.500 0.00 0.00 0.00 3.41
769 777 4.059511 TGGTACACGGTTGTTTCACATAG 58.940 43.478 0.00 0.00 37.15 2.23
802 810 7.683746 TGGAAATTTCTTTTGAAGCTTTTTCG 58.316 30.769 17.42 0.00 39.88 3.46
816 824 9.440773 GGCAGATTTTCTAATTGGAAATTTCTT 57.559 29.630 16.56 7.20 35.51 2.52
817 825 8.819845 AGGCAGATTTTCTAATTGGAAATTTCT 58.180 29.630 16.56 17.03 35.51 2.52
818 826 8.876790 CAGGCAGATTTTCTAATTGGAAATTTC 58.123 33.333 16.56 15.44 35.51 2.17
819 827 7.335171 GCAGGCAGATTTTCTAATTGGAAATTT 59.665 33.333 16.56 8.49 35.51 1.82
820 828 6.820152 GCAGGCAGATTTTCTAATTGGAAATT 59.180 34.615 16.56 13.27 35.51 1.82
821 829 6.343703 GCAGGCAGATTTTCTAATTGGAAAT 58.656 36.000 16.56 8.02 35.51 2.17
822 830 5.337491 GGCAGGCAGATTTTCTAATTGGAAA 60.337 40.000 12.47 12.47 33.98 3.13
823 831 4.160252 GGCAGGCAGATTTTCTAATTGGAA 59.840 41.667 0.00 0.00 0.00 3.53
824 832 3.701040 GGCAGGCAGATTTTCTAATTGGA 59.299 43.478 0.00 0.00 0.00 3.53
825 833 3.448301 TGGCAGGCAGATTTTCTAATTGG 59.552 43.478 0.00 0.00 0.00 3.16
826 834 4.441079 CCTGGCAGGCAGATTTTCTAATTG 60.441 45.833 25.36 0.00 0.00 2.32
827 835 3.703052 CCTGGCAGGCAGATTTTCTAATT 59.297 43.478 25.36 0.00 0.00 1.40
828 836 3.294214 CCTGGCAGGCAGATTTTCTAAT 58.706 45.455 25.36 0.00 0.00 1.73
829 837 2.726821 CCTGGCAGGCAGATTTTCTAA 58.273 47.619 25.36 0.00 0.00 2.10
830 838 2.425143 CCTGGCAGGCAGATTTTCTA 57.575 50.000 25.36 0.00 0.00 2.10
866 874 2.045045 TGAAATGGCCTGCGAGGG 60.045 61.111 3.32 0.00 35.37 4.30
898 906 5.047306 GGGAGAACCTTCCATTTTTGTAAGG 60.047 44.000 0.00 0.00 43.42 2.69
920 929 2.132762 GTCGGCGTGATGTTTATAGGG 58.867 52.381 6.85 0.00 0.00 3.53
951 964 0.104120 TGAGTGTGACCGGACAAGTG 59.896 55.000 9.46 0.00 0.00 3.16
954 967 0.179094 GTGTGAGTGTGACCGGACAA 60.179 55.000 9.46 0.00 0.00 3.18
984 997 3.499048 CTTCATTTTGTGCTAGCAGCTG 58.501 45.455 20.03 10.11 42.97 4.24
993 1006 3.365820 CCATCGAAAGCTTCATTTTGTGC 59.634 43.478 0.00 0.00 0.00 4.57
1018 1031 1.900545 AAGACTAGGGAAGCCACGGC 61.901 60.000 0.00 0.00 42.33 5.68
1141 1154 0.110644 GAAAGGACTTGCTTCGCGTG 60.111 55.000 5.77 1.17 0.00 5.34
1257 1270 1.298563 GTCCGTGTCGTCGACAACA 60.299 57.895 28.48 11.40 44.49 3.33
1260 1273 4.016629 CCGTCCGTGTCGTCGACA 62.017 66.667 23.70 23.70 40.50 4.35
1407 1426 4.208686 GCCGCGTAGTCCTGGAGG 62.209 72.222 4.92 0.00 0.00 4.30
1545 1567 1.218316 GCAGTAGTCCAGGAACCGG 59.782 63.158 0.00 0.00 0.00 5.28
1546 1568 1.153823 CGCAGTAGTCCAGGAACCG 60.154 63.158 0.00 0.00 0.00 4.44
1658 1680 4.008933 ACAGGTCCTGCACGCTCC 62.009 66.667 19.40 0.00 34.37 4.70
1719 1773 3.311091 ACGTGGCCACTATATTTAGGGA 58.689 45.455 32.28 0.00 29.57 4.20
1725 1779 3.199071 TCTGGAAACGTGGCCACTATATT 59.801 43.478 32.28 20.54 0.00 1.28
1821 1876 2.845752 GAACATGGGGCGCGTGTCTA 62.846 60.000 26.79 0.00 0.00 2.59
1857 1913 2.035832 CGGATTGTGGCCTTTTTGAAGT 59.964 45.455 3.32 0.00 0.00 3.01
2032 2114 3.434319 CACAGAAGCCGCGCCAAT 61.434 61.111 0.00 0.00 0.00 3.16
2118 2265 0.620556 GAGGCCTCATCCTGAACCAA 59.379 55.000 28.43 0.00 36.38 3.67
2177 2325 2.435586 GCGCTGACATGCTCCAGT 60.436 61.111 0.00 0.00 33.19 4.00
2223 2372 2.126424 GTCGCCGCGAAGAAGAGT 60.126 61.111 18.71 0.00 37.72 3.24
2653 2889 2.122369 CCCTCCCTATTCCGCCCT 60.122 66.667 0.00 0.00 0.00 5.19
2655 2903 2.122547 TCCCCTCCCTATTCCGCC 60.123 66.667 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.