Multiple sequence alignment - TraesCS1B01G182300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G182300 chr1B 100.000 4081 0 0 1 4081 329298678 329294598 0.000000e+00 7537.0
1 TraesCS1B01G182300 chr1B 83.616 531 65 19 3557 4081 402796090 402796604 2.850000e-131 479.0
2 TraesCS1B01G182300 chr1B 84.457 341 40 8 3704 4042 678477152 678477481 1.410000e-84 324.0
3 TraesCS1B01G182300 chr1B 93.370 181 9 3 306 484 676255960 676256139 8.700000e-67 265.0
4 TraesCS1B01G182300 chr1B 92.432 185 13 1 307 490 580537319 580537135 3.130000e-66 263.0
5 TraesCS1B01G182300 chr1A 94.524 2794 108 24 487 3254 298155192 298152418 0.000000e+00 4270.0
6 TraesCS1B01G182300 chr1A 92.880 309 10 5 1 299 298155496 298155190 4.840000e-119 438.0
7 TraesCS1B01G182300 chr1D 94.872 2730 103 16 487 3200 249318788 249321496 0.000000e+00 4231.0
8 TraesCS1B01G182300 chr1D 90.354 311 15 7 1 299 249318483 249318790 1.060000e-105 394.0
9 TraesCS1B01G182300 chr1D 85.551 263 34 4 3807 4067 355089878 355090138 5.200000e-69 272.0
10 TraesCS1B01G182300 chr1D 95.652 69 2 1 3195 3263 249327901 249327968 4.310000e-20 110.0
11 TraesCS1B01G182300 chr1D 100.000 35 0 0 3484 3518 249342102 249342136 9.470000e-07 65.8
12 TraesCS1B01G182300 chr3B 94.140 529 29 2 3554 4081 75709085 75709612 0.000000e+00 804.0
13 TraesCS1B01G182300 chr3B 85.472 530 60 11 3557 4081 154367670 154367153 1.670000e-148 536.0
14 TraesCS1B01G182300 chr3B 85.066 529 67 7 3557 4081 25140940 25140420 2.790000e-146 529.0
15 TraesCS1B01G182300 chr3B 91.623 191 11 5 304 490 477626736 477626925 4.050000e-65 259.0
16 TraesCS1B01G182300 chr5B 91.132 530 41 4 3557 4081 644471207 644470679 0.000000e+00 713.0
17 TraesCS1B01G182300 chr5B 92.857 182 11 2 304 484 352140547 352140367 3.130000e-66 263.0
18 TraesCS1B01G182300 chr2B 93.004 486 29 4 3562 4045 720175 719693 0.000000e+00 704.0
19 TraesCS1B01G182300 chr2B 91.192 193 13 4 306 497 405271873 405271684 4.050000e-65 259.0
20 TraesCS1B01G182300 chr4D 83.984 512 70 7 3557 4063 175070606 175070102 7.930000e-132 481.0
21 TraesCS1B01G182300 chr7B 93.820 178 9 2 306 482 683465878 683466054 2.420000e-67 267.0
22 TraesCS1B01G182300 chr7B 90.476 63 6 0 1606 1668 78124536 78124598 2.610000e-12 84.2
23 TraesCS1B01G182300 chr7B 100.000 31 0 0 2580 2610 72280012 72280042 1.580000e-04 58.4
24 TraesCS1B01G182300 chr6B 93.407 182 9 3 308 488 624228692 624228871 2.420000e-67 267.0
25 TraesCS1B01G182300 chr4B 93.370 181 11 1 306 485 666660159 666660339 2.420000e-67 267.0
26 TraesCS1B01G182300 chr4B 93.370 181 9 3 306 485 666696785 666696963 8.700000e-67 265.0
27 TraesCS1B01G182300 chr4A 90.476 63 6 0 1606 1668 466147422 466147484 2.610000e-12 84.2
28 TraesCS1B01G182300 chr7A 100.000 31 0 0 2580 2610 118106117 118106147 1.580000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G182300 chr1B 329294598 329298678 4080 True 7537.0 7537 100.000 1 4081 1 chr1B.!!$R1 4080
1 TraesCS1B01G182300 chr1B 402796090 402796604 514 False 479.0 479 83.616 3557 4081 1 chr1B.!!$F1 524
2 TraesCS1B01G182300 chr1A 298152418 298155496 3078 True 2354.0 4270 93.702 1 3254 2 chr1A.!!$R1 3253
3 TraesCS1B01G182300 chr1D 249318483 249321496 3013 False 2312.5 4231 92.613 1 3200 2 chr1D.!!$F4 3199
4 TraesCS1B01G182300 chr3B 75709085 75709612 527 False 804.0 804 94.140 3554 4081 1 chr3B.!!$F1 527
5 TraesCS1B01G182300 chr3B 154367153 154367670 517 True 536.0 536 85.472 3557 4081 1 chr3B.!!$R2 524
6 TraesCS1B01G182300 chr3B 25140420 25140940 520 True 529.0 529 85.066 3557 4081 1 chr3B.!!$R1 524
7 TraesCS1B01G182300 chr5B 644470679 644471207 528 True 713.0 713 91.132 3557 4081 1 chr5B.!!$R2 524
8 TraesCS1B01G182300 chr4D 175070102 175070606 504 True 481.0 481 83.984 3557 4063 1 chr4D.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
405 418 0.106967 GATTTCCAGAGAGGTGGGCC 60.107 60.0 0.0 0.0 38.26 5.80 F
425 438 0.107165 GCCCCACTCACCTATTGACC 60.107 60.0 0.0 0.0 0.00 4.02 F
484 497 0.244178 TGTACGTGTAGCATTGCCGA 59.756 50.0 4.7 0.0 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2404 2454 0.617935 TCTCACCAAATCGCCATGGA 59.382 50.000 18.4 0.0 39.12 3.41 R
2558 2609 1.663173 CCGGTGGAAAAACGGCATT 59.337 52.632 0.0 0.0 41.23 3.56 R
3169 3220 5.878116 TCCGAGAAGAAAGAGAAACACAAAA 59.122 36.000 0.0 0.0 0.00 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 3.056749 GGCGTACGATCTCCTTATCCATT 60.057 47.826 21.65 0.00 0.00 3.16
102 103 0.740737 CCAAAGGTCGAATGATGGCC 59.259 55.000 0.00 0.00 0.00 5.36
146 147 1.043816 CATATCCCCAGCACGTCTCT 58.956 55.000 0.00 0.00 0.00 3.10
218 226 2.632377 CATCCATCGGTTGTTGTAGCT 58.368 47.619 0.00 0.00 0.00 3.32
252 260 1.531602 AGCCTGCACCCAAAACCTC 60.532 57.895 0.00 0.00 0.00 3.85
253 261 2.919494 GCCTGCACCCAAAACCTCG 61.919 63.158 0.00 0.00 0.00 4.63
254 262 1.528309 CCTGCACCCAAAACCTCGT 60.528 57.895 0.00 0.00 0.00 4.18
292 305 1.416401 AGAACTCGGACCTCTTTTGCA 59.584 47.619 0.00 0.00 0.00 4.08
299 312 3.136443 TCGGACCTCTTTTGCATCCATAT 59.864 43.478 1.47 0.00 0.00 1.78
300 313 4.346709 TCGGACCTCTTTTGCATCCATATA 59.653 41.667 1.47 0.00 0.00 0.86
302 315 5.180117 CGGACCTCTTTTGCATCCATATAAG 59.820 44.000 1.47 0.00 0.00 1.73
304 317 6.944862 GGACCTCTTTTGCATCCATATAAGAT 59.055 38.462 0.00 0.00 0.00 2.40
305 318 7.120432 GGACCTCTTTTGCATCCATATAAGATC 59.880 40.741 0.00 0.00 0.00 2.75
306 319 7.520798 ACCTCTTTTGCATCCATATAAGATCA 58.479 34.615 0.00 0.00 0.00 2.92
307 320 8.000709 ACCTCTTTTGCATCCATATAAGATCAA 58.999 33.333 0.00 0.00 0.00 2.57
308 321 8.853126 CCTCTTTTGCATCCATATAAGATCAAA 58.147 33.333 0.00 0.00 0.00 2.69
313 326 8.821147 TTGCATCCATATAAGATCAAAAATGC 57.179 30.769 0.00 0.00 37.03 3.56
314 327 8.185506 TGCATCCATATAAGATCAAAAATGCT 57.814 30.769 0.00 0.00 37.32 3.79
315 328 9.299465 TGCATCCATATAAGATCAAAAATGCTA 57.701 29.630 0.00 0.00 37.32 3.49
316 329 9.784680 GCATCCATATAAGATCAAAAATGCTAG 57.215 33.333 0.00 0.00 34.47 3.42
327 340 9.453572 AGATCAAAAATGCTAGACATACAAAGA 57.546 29.630 0.00 0.00 38.34 2.52
328 341 9.495754 GATCAAAAATGCTAGACATACAAAGAC 57.504 33.333 0.00 0.00 38.34 3.01
329 342 8.621532 TCAAAAATGCTAGACATACAAAGACT 57.378 30.769 0.00 0.00 38.34 3.24
330 343 9.066892 TCAAAAATGCTAGACATACAAAGACTT 57.933 29.630 0.00 0.00 38.34 3.01
333 346 9.502091 AAAATGCTAGACATACAAAGACTTACA 57.498 29.630 0.00 0.00 38.34 2.41
334 347 8.480643 AATGCTAGACATACAAAGACTTACAC 57.519 34.615 0.00 0.00 38.34 2.90
335 348 6.090783 TGCTAGACATACAAAGACTTACACG 58.909 40.000 0.00 0.00 0.00 4.49
336 349 5.004535 GCTAGACATACAAAGACTTACACGC 59.995 44.000 0.00 0.00 0.00 5.34
337 350 5.135508 AGACATACAAAGACTTACACGCT 57.864 39.130 0.00 0.00 0.00 5.07
338 351 5.539048 AGACATACAAAGACTTACACGCTT 58.461 37.500 0.00 0.00 0.00 4.68
339 352 5.989777 AGACATACAAAGACTTACACGCTTT 59.010 36.000 0.00 0.00 32.46 3.51
340 353 6.482308 AGACATACAAAGACTTACACGCTTTT 59.518 34.615 0.00 0.00 30.00 2.27
341 354 7.654520 AGACATACAAAGACTTACACGCTTTTA 59.345 33.333 0.00 0.00 30.00 1.52
342 355 7.570161 ACATACAAAGACTTACACGCTTTTAC 58.430 34.615 0.00 0.00 30.00 2.01
343 356 7.225145 ACATACAAAGACTTACACGCTTTTACA 59.775 33.333 0.00 0.00 30.00 2.41
344 357 5.803118 ACAAAGACTTACACGCTTTTACAC 58.197 37.500 0.00 0.00 30.00 2.90
345 358 4.703899 AAGACTTACACGCTTTTACACG 57.296 40.909 0.00 0.00 0.00 4.49
346 359 2.473984 AGACTTACACGCTTTTACACGC 59.526 45.455 0.00 0.00 0.00 5.34
347 360 2.473984 GACTTACACGCTTTTACACGCT 59.526 45.455 0.00 0.00 0.00 5.07
348 361 2.473984 ACTTACACGCTTTTACACGCTC 59.526 45.455 0.00 0.00 0.00 5.03
349 362 1.421382 TACACGCTTTTACACGCTCC 58.579 50.000 0.00 0.00 0.00 4.70
350 363 0.249741 ACACGCTTTTACACGCTCCT 60.250 50.000 0.00 0.00 0.00 3.69
351 364 0.865769 CACGCTTTTACACGCTCCTT 59.134 50.000 0.00 0.00 0.00 3.36
352 365 1.136336 CACGCTTTTACACGCTCCTTC 60.136 52.381 0.00 0.00 0.00 3.46
353 366 0.442699 CGCTTTTACACGCTCCTTCC 59.557 55.000 0.00 0.00 0.00 3.46
354 367 1.519408 GCTTTTACACGCTCCTTCCA 58.481 50.000 0.00 0.00 0.00 3.53
355 368 2.084546 GCTTTTACACGCTCCTTCCAT 58.915 47.619 0.00 0.00 0.00 3.41
356 369 2.096013 GCTTTTACACGCTCCTTCCATC 59.904 50.000 0.00 0.00 0.00 3.51
357 370 3.600388 CTTTTACACGCTCCTTCCATCT 58.400 45.455 0.00 0.00 0.00 2.90
358 371 4.755411 CTTTTACACGCTCCTTCCATCTA 58.245 43.478 0.00 0.00 0.00 1.98
359 372 4.811969 TTTACACGCTCCTTCCATCTAA 57.188 40.909 0.00 0.00 0.00 2.10
360 373 2.674796 ACACGCTCCTTCCATCTAAC 57.325 50.000 0.00 0.00 0.00 2.34
361 374 1.899814 ACACGCTCCTTCCATCTAACA 59.100 47.619 0.00 0.00 0.00 2.41
362 375 2.301870 ACACGCTCCTTCCATCTAACAA 59.698 45.455 0.00 0.00 0.00 2.83
363 376 3.055094 ACACGCTCCTTCCATCTAACAAT 60.055 43.478 0.00 0.00 0.00 2.71
364 377 3.557595 CACGCTCCTTCCATCTAACAATC 59.442 47.826 0.00 0.00 0.00 2.67
365 378 3.197766 ACGCTCCTTCCATCTAACAATCA 59.802 43.478 0.00 0.00 0.00 2.57
366 379 4.191544 CGCTCCTTCCATCTAACAATCAA 58.808 43.478 0.00 0.00 0.00 2.57
367 380 4.818546 CGCTCCTTCCATCTAACAATCAAT 59.181 41.667 0.00 0.00 0.00 2.57
368 381 5.049818 CGCTCCTTCCATCTAACAATCAATC 60.050 44.000 0.00 0.00 0.00 2.67
369 382 5.824624 GCTCCTTCCATCTAACAATCAATCA 59.175 40.000 0.00 0.00 0.00 2.57
370 383 6.238593 GCTCCTTCCATCTAACAATCAATCAC 60.239 42.308 0.00 0.00 0.00 3.06
371 384 6.720309 TCCTTCCATCTAACAATCAATCACA 58.280 36.000 0.00 0.00 0.00 3.58
372 385 7.174413 TCCTTCCATCTAACAATCAATCACAA 58.826 34.615 0.00 0.00 0.00 3.33
373 386 7.669304 TCCTTCCATCTAACAATCAATCACAAA 59.331 33.333 0.00 0.00 0.00 2.83
374 387 7.756722 CCTTCCATCTAACAATCAATCACAAAC 59.243 37.037 0.00 0.00 0.00 2.93
375 388 7.156876 TCCATCTAACAATCAATCACAAACC 57.843 36.000 0.00 0.00 0.00 3.27
376 389 6.947733 TCCATCTAACAATCAATCACAAACCT 59.052 34.615 0.00 0.00 0.00 3.50
377 390 7.451255 TCCATCTAACAATCAATCACAAACCTT 59.549 33.333 0.00 0.00 0.00 3.50
378 391 7.756722 CCATCTAACAATCAATCACAAACCTTC 59.243 37.037 0.00 0.00 0.00 3.46
379 392 7.214467 TCTAACAATCAATCACAAACCTTCC 57.786 36.000 0.00 0.00 0.00 3.46
380 393 5.867903 AACAATCAATCACAAACCTTCCA 57.132 34.783 0.00 0.00 0.00 3.53
381 394 5.200368 ACAATCAATCACAAACCTTCCAC 57.800 39.130 0.00 0.00 0.00 4.02
382 395 4.895297 ACAATCAATCACAAACCTTCCACT 59.105 37.500 0.00 0.00 0.00 4.00
383 396 5.010012 ACAATCAATCACAAACCTTCCACTC 59.990 40.000 0.00 0.00 0.00 3.51
384 397 3.486383 TCAATCACAAACCTTCCACTCC 58.514 45.455 0.00 0.00 0.00 3.85
385 398 3.138283 TCAATCACAAACCTTCCACTCCT 59.862 43.478 0.00 0.00 0.00 3.69
386 399 2.638480 TCACAAACCTTCCACTCCTG 57.362 50.000 0.00 0.00 0.00 3.86
387 400 2.123589 TCACAAACCTTCCACTCCTGA 58.876 47.619 0.00 0.00 0.00 3.86
388 401 2.711009 TCACAAACCTTCCACTCCTGAT 59.289 45.455 0.00 0.00 0.00 2.90
389 402 3.138283 TCACAAACCTTCCACTCCTGATT 59.862 43.478 0.00 0.00 0.00 2.57
390 403 3.891366 CACAAACCTTCCACTCCTGATTT 59.109 43.478 0.00 0.00 0.00 2.17
391 404 4.022849 CACAAACCTTCCACTCCTGATTTC 60.023 45.833 0.00 0.00 0.00 2.17
392 405 3.441500 AACCTTCCACTCCTGATTTCC 57.558 47.619 0.00 0.00 0.00 3.13
393 406 2.348472 ACCTTCCACTCCTGATTTCCA 58.652 47.619 0.00 0.00 0.00 3.53
394 407 2.307098 ACCTTCCACTCCTGATTTCCAG 59.693 50.000 0.00 0.00 42.55 3.86
395 408 2.573462 CCTTCCACTCCTGATTTCCAGA 59.427 50.000 0.00 0.00 45.78 3.86
396 409 3.370315 CCTTCCACTCCTGATTTCCAGAG 60.370 52.174 0.00 0.00 45.78 3.35
397 410 3.190383 TCCACTCCTGATTTCCAGAGA 57.810 47.619 0.00 0.00 45.78 3.10
398 411 3.102972 TCCACTCCTGATTTCCAGAGAG 58.897 50.000 0.00 0.00 45.78 3.20
399 412 2.170187 CCACTCCTGATTTCCAGAGAGG 59.830 54.545 0.00 0.00 45.78 3.69
400 413 2.836981 CACTCCTGATTTCCAGAGAGGT 59.163 50.000 0.00 0.00 45.78 3.85
401 414 2.836981 ACTCCTGATTTCCAGAGAGGTG 59.163 50.000 0.00 0.00 45.78 4.00
402 415 2.170187 CTCCTGATTTCCAGAGAGGTGG 59.830 54.545 0.00 0.00 45.78 4.61
403 416 1.211457 CCTGATTTCCAGAGAGGTGGG 59.789 57.143 0.00 0.00 45.78 4.61
404 417 0.620556 TGATTTCCAGAGAGGTGGGC 59.379 55.000 0.00 0.00 38.26 5.36
405 418 0.106967 GATTTCCAGAGAGGTGGGCC 60.107 60.000 0.00 0.00 38.26 5.80
406 419 1.915078 ATTTCCAGAGAGGTGGGCCG 61.915 60.000 0.00 0.00 38.26 6.13
420 433 3.480133 GCCGCCCCACTCACCTAT 61.480 66.667 0.00 0.00 0.00 2.57
421 434 3.043999 GCCGCCCCACTCACCTATT 62.044 63.158 0.00 0.00 0.00 1.73
422 435 1.153168 CCGCCCCACTCACCTATTG 60.153 63.158 0.00 0.00 0.00 1.90
423 436 1.622607 CCGCCCCACTCACCTATTGA 61.623 60.000 0.00 0.00 0.00 2.57
424 437 0.462047 CGCCCCACTCACCTATTGAC 60.462 60.000 0.00 0.00 0.00 3.18
425 438 0.107165 GCCCCACTCACCTATTGACC 60.107 60.000 0.00 0.00 0.00 4.02
426 439 1.285280 CCCCACTCACCTATTGACCA 58.715 55.000 0.00 0.00 0.00 4.02
427 440 1.633432 CCCCACTCACCTATTGACCAA 59.367 52.381 0.00 0.00 0.00 3.67
428 441 2.242196 CCCCACTCACCTATTGACCAAT 59.758 50.000 0.64 0.64 34.93 3.16
429 442 3.545703 CCCACTCACCTATTGACCAATC 58.454 50.000 0.00 0.00 32.50 2.67
430 443 3.054434 CCCACTCACCTATTGACCAATCA 60.054 47.826 0.00 0.00 32.50 2.57
445 458 8.870160 TTGACCAATCAAAGTTAACAATTCTG 57.130 30.769 8.61 0.00 41.99 3.02
446 459 8.006298 TGACCAATCAAAGTTAACAATTCTGT 57.994 30.769 8.61 2.50 37.39 3.41
447 460 9.126151 TGACCAATCAAAGTTAACAATTCTGTA 57.874 29.630 8.61 0.00 33.45 2.74
448 461 9.959749 GACCAATCAAAGTTAACAATTCTGTAA 57.040 29.630 8.61 0.00 33.45 2.41
453 466 8.865590 TCAAAGTTAACAATTCTGTAAAAGCC 57.134 30.769 8.61 0.00 33.45 4.35
454 467 8.691797 TCAAAGTTAACAATTCTGTAAAAGCCT 58.308 29.630 8.61 0.00 33.45 4.58
455 468 8.755018 CAAAGTTAACAATTCTGTAAAAGCCTG 58.245 33.333 8.61 0.00 33.45 4.85
456 469 7.582667 AGTTAACAATTCTGTAAAAGCCTGT 57.417 32.000 8.61 0.00 33.45 4.00
457 470 8.685838 AGTTAACAATTCTGTAAAAGCCTGTA 57.314 30.769 8.61 0.00 33.45 2.74
458 471 9.127277 AGTTAACAATTCTGTAAAAGCCTGTAA 57.873 29.630 8.61 0.00 33.45 2.41
459 472 9.738832 GTTAACAATTCTGTAAAAGCCTGTAAA 57.261 29.630 0.00 0.00 33.45 2.01
462 475 7.305474 ACAATTCTGTAAAAGCCTGTAAATCG 58.695 34.615 0.00 0.00 32.54 3.34
463 476 7.040686 ACAATTCTGTAAAAGCCTGTAAATCGT 60.041 33.333 0.00 0.00 32.54 3.73
464 477 6.870971 TTCTGTAAAAGCCTGTAAATCGTT 57.129 33.333 0.00 0.00 0.00 3.85
465 478 6.870971 TCTGTAAAAGCCTGTAAATCGTTT 57.129 33.333 0.00 0.00 0.00 3.60
466 479 6.664515 TCTGTAAAAGCCTGTAAATCGTTTG 58.335 36.000 0.00 0.00 0.00 2.93
467 480 6.261381 TCTGTAAAAGCCTGTAAATCGTTTGT 59.739 34.615 0.00 0.00 0.00 2.83
468 481 7.441760 TCTGTAAAAGCCTGTAAATCGTTTGTA 59.558 33.333 0.00 0.00 0.00 2.41
469 482 7.354257 TGTAAAAGCCTGTAAATCGTTTGTAC 58.646 34.615 0.00 0.00 0.00 2.90
481 494 2.492001 CGTTTGTACGTGTAGCATTGC 58.508 47.619 0.00 0.00 42.72 3.56
482 495 2.723618 CGTTTGTACGTGTAGCATTGCC 60.724 50.000 4.70 0.00 42.72 4.52
483 496 1.072391 TTGTACGTGTAGCATTGCCG 58.928 50.000 4.70 4.23 0.00 5.69
484 497 0.244178 TGTACGTGTAGCATTGCCGA 59.756 50.000 4.70 0.00 0.00 5.54
485 498 1.134936 TGTACGTGTAGCATTGCCGAT 60.135 47.619 4.70 0.00 0.00 4.18
486 499 2.099427 TGTACGTGTAGCATTGCCGATA 59.901 45.455 4.70 0.00 0.00 2.92
487 500 2.526304 ACGTGTAGCATTGCCGATAT 57.474 45.000 4.70 0.00 0.00 1.63
488 501 3.653539 ACGTGTAGCATTGCCGATATA 57.346 42.857 4.70 0.00 0.00 0.86
489 502 3.985008 ACGTGTAGCATTGCCGATATAA 58.015 40.909 4.70 0.00 0.00 0.98
490 503 3.987868 ACGTGTAGCATTGCCGATATAAG 59.012 43.478 4.70 0.00 0.00 1.73
491 504 4.234574 CGTGTAGCATTGCCGATATAAGA 58.765 43.478 4.70 0.00 0.00 2.10
492 505 4.864806 CGTGTAGCATTGCCGATATAAGAT 59.135 41.667 4.70 0.00 0.00 2.40
493 506 6.033966 CGTGTAGCATTGCCGATATAAGATA 58.966 40.000 4.70 0.00 0.00 1.98
494 507 6.020599 CGTGTAGCATTGCCGATATAAGATAC 60.021 42.308 4.70 0.00 0.00 2.24
495 508 7.036220 GTGTAGCATTGCCGATATAAGATACT 58.964 38.462 4.70 0.00 0.00 2.12
501 515 7.976734 GCATTGCCGATATAAGATACTAGAGTT 59.023 37.037 0.00 0.00 0.00 3.01
513 527 8.824756 AAGATACTAGAGTTGACCTGACAATA 57.175 34.615 0.00 0.00 32.36 1.90
515 529 5.923733 ACTAGAGTTGACCTGACAATAGG 57.076 43.478 0.00 0.00 43.71 2.57
549 563 0.615331 TCTGGAGCCACCTCAATCAC 59.385 55.000 0.00 0.00 39.96 3.06
550 564 0.325933 CTGGAGCCACCTCAATCACA 59.674 55.000 0.00 0.00 39.96 3.58
591 608 7.663081 TCTTCTGTGCATAGTCAAAAATCTTCT 59.337 33.333 10.52 0.00 0.00 2.85
601 618 2.409948 AAAATCTTCTCGGAGGCAGG 57.590 50.000 4.96 0.00 0.00 4.85
609 626 3.385384 CGGAGGCAGGCAGACAGA 61.385 66.667 0.00 0.00 0.00 3.41
773 801 3.575630 GCTGTAGTTCACGTCTGAATCA 58.424 45.455 0.00 0.00 38.69 2.57
814 842 3.260884 CACACACCACTACTACCATTCCT 59.739 47.826 0.00 0.00 0.00 3.36
817 845 4.024670 ACACCACTACTACCATTCCTCTC 58.975 47.826 0.00 0.00 0.00 3.20
829 857 4.732957 ACCATTCCTCTCCTACTACTACCT 59.267 45.833 0.00 0.00 0.00 3.08
931 962 4.442375 CCTACTGTTAGGCTCCATATCG 57.558 50.000 0.00 0.00 38.72 2.92
947 978 8.679100 GCTCCATATCGAACATTAGTCTATACT 58.321 37.037 0.00 0.00 39.91 2.12
965 996 1.620819 ACTCTGATCGGAAGCAAGTGT 59.379 47.619 5.58 0.00 0.00 3.55
1110 1141 2.182030 GAGTTGGCGGAGTCGGAG 59.818 66.667 1.18 0.00 36.79 4.63
1118 1149 2.043852 GGAGTCGGAGCTGGAGGA 60.044 66.667 0.00 0.00 0.00 3.71
1371 1402 3.168271 CGTGACAACGCCATCCAG 58.832 61.111 0.00 0.00 43.98 3.86
1799 1830 1.208614 GCAAGTCAAGGCGCTTCAG 59.791 57.895 7.64 0.00 0.00 3.02
1896 1927 1.550524 CATCAGACCAAGAAGTCCCGA 59.449 52.381 0.00 0.00 37.49 5.14
1963 1994 3.066291 TCAAGGATAAAGCCGAGCAAA 57.934 42.857 0.00 0.00 0.00 3.68
2097 2128 3.699955 TTCGACGGCGGAGATGCTG 62.700 63.158 12.58 0.00 46.83 4.41
2106 2137 2.832201 GAGATGCTGGGCAAGGGC 60.832 66.667 0.00 0.00 43.62 5.19
2170 2201 2.915659 TCGTCCTGGTGAAGCGGT 60.916 61.111 0.00 0.00 0.00 5.68
2184 2215 3.669344 CGGTTGCGCAACATGGGT 61.669 61.111 43.53 0.00 42.85 4.51
2385 2435 5.424757 CAACATGCATCTCCATTTTCCATT 58.575 37.500 0.00 0.00 0.00 3.16
2386 2436 5.018539 ACATGCATCTCCATTTTCCATTG 57.981 39.130 0.00 0.00 0.00 2.82
2387 2437 4.712829 ACATGCATCTCCATTTTCCATTGA 59.287 37.500 0.00 0.00 0.00 2.57
2388 2438 5.365605 ACATGCATCTCCATTTTCCATTGAT 59.634 36.000 0.00 0.00 0.00 2.57
2389 2439 6.551975 ACATGCATCTCCATTTTCCATTGATA 59.448 34.615 0.00 0.00 0.00 2.15
2390 2440 7.070198 ACATGCATCTCCATTTTCCATTGATAA 59.930 33.333 0.00 0.00 0.00 1.75
2391 2441 6.808829 TGCATCTCCATTTTCCATTGATAAC 58.191 36.000 0.00 0.00 0.00 1.89
2392 2442 6.608405 TGCATCTCCATTTTCCATTGATAACT 59.392 34.615 0.00 0.00 0.00 2.24
2393 2443 7.124599 TGCATCTCCATTTTCCATTGATAACTT 59.875 33.333 0.00 0.00 0.00 2.66
2394 2444 7.437267 GCATCTCCATTTTCCATTGATAACTTG 59.563 37.037 0.00 0.00 0.00 3.16
2395 2445 8.472413 CATCTCCATTTTCCATTGATAACTTGT 58.528 33.333 0.00 0.00 0.00 3.16
2396 2446 8.055279 TCTCCATTTTCCATTGATAACTTGTC 57.945 34.615 0.00 0.00 0.00 3.18
2397 2447 7.122650 TCTCCATTTTCCATTGATAACTTGTCC 59.877 37.037 0.00 0.00 0.00 4.02
2398 2448 6.723515 TCCATTTTCCATTGATAACTTGTCCA 59.276 34.615 0.00 0.00 0.00 4.02
2399 2449 7.399765 TCCATTTTCCATTGATAACTTGTCCAT 59.600 33.333 0.00 0.00 0.00 3.41
2404 2454 8.877864 TTCCATTGATAACTTGTCCATTAGTT 57.122 30.769 0.00 0.00 38.16 2.24
2444 2494 5.627499 GATCGACTGATCTTGCTCTATCT 57.373 43.478 0.00 0.00 46.22 1.98
2446 2496 7.139896 GATCGACTGATCTTGCTCTATCTTA 57.860 40.000 0.00 0.00 46.22 2.10
2451 2502 7.325821 CGACTGATCTTGCTCTATCTTATTGTC 59.674 40.741 0.00 0.00 0.00 3.18
2558 2609 4.367023 GCGTACCTGCACCGGACA 62.367 66.667 9.46 4.86 34.15 4.02
2616 2667 1.819288 AGTCGTCCAACGTGATCATCT 59.181 47.619 0.00 0.00 43.14 2.90
2650 2701 4.170062 CAAGCACCAGCATCCGCG 62.170 66.667 0.00 0.00 45.49 6.46
3209 3261 1.774254 TCGGAAGGTATCATGGCCATT 59.226 47.619 17.92 5.10 0.00 3.16
3215 3267 3.415212 AGGTATCATGGCCATTCGATTG 58.585 45.455 17.92 5.28 0.00 2.67
3217 3269 1.624336 ATCATGGCCATTCGATTGGG 58.376 50.000 23.91 10.26 37.24 4.12
3219 3271 1.833934 ATGGCCATTCGATTGGGGC 60.834 57.895 23.91 19.18 46.62 5.80
3228 3280 1.027357 TCGATTGGGGCGTACTACTC 58.973 55.000 0.00 0.00 0.00 2.59
3231 3283 1.397390 ATTGGGGCGTACTACTCCGG 61.397 60.000 0.00 0.00 0.00 5.14
3236 3288 1.382692 GGCGTACTACTCCGGAGCTT 61.383 60.000 31.56 17.53 0.00 3.74
3245 3297 1.202428 ACTCCGGAGCTTTCTAATCGC 60.202 52.381 31.56 0.00 0.00 4.58
3254 3306 5.163754 GGAGCTTTCTAATCGCTTTTGCTAA 60.164 40.000 0.00 0.00 44.80 3.09
3255 3307 6.254281 AGCTTTCTAATCGCTTTTGCTAAA 57.746 33.333 0.00 0.00 44.80 1.85
3256 3308 6.856895 AGCTTTCTAATCGCTTTTGCTAAAT 58.143 32.000 0.00 0.00 44.80 1.40
3257 3309 6.749118 AGCTTTCTAATCGCTTTTGCTAAATG 59.251 34.615 0.00 0.00 44.80 2.32
3258 3310 6.528072 GCTTTCTAATCGCTTTTGCTAAATGT 59.472 34.615 0.00 0.00 44.80 2.71
3259 3311 7.253453 GCTTTCTAATCGCTTTTGCTAAATGTC 60.253 37.037 0.00 0.00 44.80 3.06
3260 3312 6.735678 TCTAATCGCTTTTGCTAAATGTCA 57.264 33.333 0.00 0.00 44.80 3.58
3261 3313 6.775088 TCTAATCGCTTTTGCTAAATGTCAG 58.225 36.000 0.00 0.00 44.80 3.51
3262 3314 3.829886 TCGCTTTTGCTAAATGTCAGG 57.170 42.857 0.00 0.00 44.80 3.86
3263 3315 2.095263 TCGCTTTTGCTAAATGTCAGGC 60.095 45.455 0.00 0.00 44.80 4.85
3264 3316 2.351641 CGCTTTTGCTAAATGTCAGGCA 60.352 45.455 0.00 0.00 44.80 4.75
3265 3317 2.989166 GCTTTTGCTAAATGTCAGGCAC 59.011 45.455 0.00 0.00 43.35 5.01
3266 3318 3.578688 CTTTTGCTAAATGTCAGGCACC 58.421 45.455 0.00 0.00 34.30 5.01
3267 3319 2.584835 TTGCTAAATGTCAGGCACCT 57.415 45.000 0.00 0.00 34.30 4.00
3268 3320 2.113860 TGCTAAATGTCAGGCACCTC 57.886 50.000 0.00 0.00 0.00 3.85
3269 3321 1.350684 TGCTAAATGTCAGGCACCTCA 59.649 47.619 0.00 0.00 0.00 3.86
3270 3322 2.224744 TGCTAAATGTCAGGCACCTCAA 60.225 45.455 0.00 0.00 0.00 3.02
3271 3323 2.819608 GCTAAATGTCAGGCACCTCAAA 59.180 45.455 0.00 0.00 0.00 2.69
3272 3324 3.445096 GCTAAATGTCAGGCACCTCAAAT 59.555 43.478 0.00 0.00 0.00 2.32
3273 3325 4.082026 GCTAAATGTCAGGCACCTCAAATT 60.082 41.667 0.00 0.00 0.00 1.82
3274 3326 4.961438 AAATGTCAGGCACCTCAAATTT 57.039 36.364 0.00 0.00 0.00 1.82
3275 3327 4.961438 AATGTCAGGCACCTCAAATTTT 57.039 36.364 0.00 0.00 0.00 1.82
3276 3328 3.731652 TGTCAGGCACCTCAAATTTTG 57.268 42.857 2.59 2.59 0.00 2.44
3277 3329 3.030291 TGTCAGGCACCTCAAATTTTGT 58.970 40.909 8.89 0.00 0.00 2.83
3278 3330 3.450457 TGTCAGGCACCTCAAATTTTGTT 59.550 39.130 8.89 0.00 0.00 2.83
3279 3331 3.803778 GTCAGGCACCTCAAATTTTGTTG 59.196 43.478 8.89 6.45 0.00 3.33
3280 3332 2.545106 CAGGCACCTCAAATTTTGTTGC 59.455 45.455 17.35 17.35 33.96 4.17
3281 3333 2.170187 AGGCACCTCAAATTTTGTTGCA 59.830 40.909 22.52 0.00 35.32 4.08
3282 3334 2.941720 GGCACCTCAAATTTTGTTGCAA 59.058 40.909 22.52 0.00 35.32 4.08
3283 3335 3.565063 GGCACCTCAAATTTTGTTGCAAT 59.435 39.130 22.52 0.00 35.32 3.56
3284 3336 4.036616 GGCACCTCAAATTTTGTTGCAATT 59.963 37.500 22.52 0.00 35.32 2.32
3285 3337 5.450274 GGCACCTCAAATTTTGTTGCAATTT 60.450 36.000 22.52 0.00 34.75 1.82
3286 3338 6.035217 GCACCTCAAATTTTGTTGCAATTTT 58.965 32.000 19.18 0.00 32.57 1.82
3287 3339 6.196910 GCACCTCAAATTTTGTTGCAATTTTC 59.803 34.615 19.18 0.00 32.57 2.29
3288 3340 7.249147 CACCTCAAATTTTGTTGCAATTTTCA 58.751 30.769 0.59 0.00 32.57 2.69
3289 3341 7.429920 CACCTCAAATTTTGTTGCAATTTTCAG 59.570 33.333 0.59 0.00 32.57 3.02
3290 3342 7.121020 ACCTCAAATTTTGTTGCAATTTTCAGT 59.879 29.630 0.59 0.00 32.57 3.41
3291 3343 7.641020 CCTCAAATTTTGTTGCAATTTTCAGTC 59.359 33.333 0.59 0.00 32.57 3.51
3292 3344 8.037382 TCAAATTTTGTTGCAATTTTCAGTCA 57.963 26.923 0.59 0.00 32.57 3.41
3293 3345 8.509690 TCAAATTTTGTTGCAATTTTCAGTCAA 58.490 25.926 0.59 0.00 32.57 3.18
3294 3346 9.125906 CAAATTTTGTTGCAATTTTCAGTCAAA 57.874 25.926 0.59 2.86 32.57 2.69
3295 3347 9.688592 AAATTTTGTTGCAATTTTCAGTCAAAA 57.311 22.222 17.29 17.29 38.38 2.44
3296 3348 8.672214 ATTTTGTTGCAATTTTCAGTCAAAAC 57.328 26.923 17.31 0.00 36.78 2.43
3297 3349 7.432350 TTTGTTGCAATTTTCAGTCAAAACT 57.568 28.000 0.59 0.00 36.78 2.66
3298 3350 6.645700 TGTTGCAATTTTCAGTCAAAACTC 57.354 33.333 0.59 0.00 36.78 3.01
3299 3351 6.397272 TGTTGCAATTTTCAGTCAAAACTCT 58.603 32.000 0.59 0.00 36.78 3.24
3300 3352 6.531240 TGTTGCAATTTTCAGTCAAAACTCTC 59.469 34.615 0.59 0.00 36.78 3.20
3301 3353 6.206395 TGCAATTTTCAGTCAAAACTCTCA 57.794 33.333 0.00 0.00 36.78 3.27
3302 3354 6.035843 TGCAATTTTCAGTCAAAACTCTCAC 58.964 36.000 0.00 0.00 36.78 3.51
3303 3355 5.460091 GCAATTTTCAGTCAAAACTCTCACC 59.540 40.000 0.00 0.00 36.78 4.02
3304 3356 4.875544 TTTTCAGTCAAAACTCTCACCG 57.124 40.909 0.00 0.00 31.71 4.94
3305 3357 3.536956 TTCAGTCAAAACTCTCACCGT 57.463 42.857 0.00 0.00 31.71 4.83
3306 3358 3.093717 TCAGTCAAAACTCTCACCGTC 57.906 47.619 0.00 0.00 31.71 4.79
3307 3359 2.135933 CAGTCAAAACTCTCACCGTCC 58.864 52.381 0.00 0.00 31.71 4.79
3308 3360 1.760613 AGTCAAAACTCTCACCGTCCA 59.239 47.619 0.00 0.00 0.00 4.02
3309 3361 2.368875 AGTCAAAACTCTCACCGTCCAT 59.631 45.455 0.00 0.00 0.00 3.41
3310 3362 3.139077 GTCAAAACTCTCACCGTCCATT 58.861 45.455 0.00 0.00 0.00 3.16
3311 3363 3.564225 GTCAAAACTCTCACCGTCCATTT 59.436 43.478 0.00 0.00 0.00 2.32
3312 3364 3.563808 TCAAAACTCTCACCGTCCATTTG 59.436 43.478 0.00 0.00 0.00 2.32
3313 3365 2.930826 AACTCTCACCGTCCATTTGT 57.069 45.000 0.00 0.00 0.00 2.83
3314 3366 2.169832 ACTCTCACCGTCCATTTGTG 57.830 50.000 0.00 0.00 0.00 3.33
3315 3367 1.270839 ACTCTCACCGTCCATTTGTGG 60.271 52.381 0.00 0.00 0.00 4.17
3316 3368 0.762418 TCTCACCGTCCATTTGTGGT 59.238 50.000 0.00 0.00 34.29 4.16
3318 3370 1.285641 CACCGTCCATTTGTGGTGC 59.714 57.895 0.00 0.00 44.69 5.01
3319 3371 1.150536 ACCGTCCATTTGTGGTGCT 59.849 52.632 0.00 0.00 32.33 4.40
3320 3372 0.467290 ACCGTCCATTTGTGGTGCTT 60.467 50.000 0.00 0.00 32.33 3.91
3321 3373 0.673437 CCGTCCATTTGTGGTGCTTT 59.327 50.000 0.00 0.00 0.00 3.51
3322 3374 1.068434 CCGTCCATTTGTGGTGCTTTT 59.932 47.619 0.00 0.00 0.00 2.27
3323 3375 2.482839 CCGTCCATTTGTGGTGCTTTTT 60.483 45.455 0.00 0.00 0.00 1.94
3355 3407 3.902881 TTTTCCATTGTGGTGCTTTGT 57.097 38.095 0.00 0.00 39.03 2.83
3356 3408 2.886862 TTCCATTGTGGTGCTTTGTG 57.113 45.000 0.00 0.00 39.03 3.33
3357 3409 0.388659 TCCATTGTGGTGCTTTGTGC 59.611 50.000 0.00 0.00 39.03 4.57
3358 3410 2.299768 TCCATTGTGGTGCTTTGTGCA 61.300 47.619 0.00 0.00 42.56 4.57
3369 3421 2.664916 GCTTTGTGCACAATGTGTAGG 58.335 47.619 33.23 16.64 42.31 3.18
3370 3422 2.293122 GCTTTGTGCACAATGTGTAGGA 59.707 45.455 33.23 18.05 42.31 2.94
3371 3423 3.243367 GCTTTGTGCACAATGTGTAGGAA 60.243 43.478 33.23 17.46 42.31 3.36
3372 3424 3.980646 TTGTGCACAATGTGTAGGAAC 57.019 42.857 27.96 6.76 35.75 3.62
3373 3425 2.924421 TGTGCACAATGTGTAGGAACA 58.076 42.857 19.28 9.05 35.75 3.18
3374 3426 2.877786 TGTGCACAATGTGTAGGAACAG 59.122 45.455 19.28 0.00 35.91 3.16
3375 3427 2.226437 GTGCACAATGTGTAGGAACAGG 59.774 50.000 13.17 0.00 35.91 4.00
3376 3428 2.158682 TGCACAATGTGTAGGAACAGGT 60.159 45.455 15.36 0.00 35.91 4.00
3377 3429 3.071747 TGCACAATGTGTAGGAACAGGTA 59.928 43.478 15.36 0.00 35.91 3.08
3378 3430 3.684788 GCACAATGTGTAGGAACAGGTAG 59.315 47.826 15.36 0.00 35.91 3.18
3379 3431 4.802918 GCACAATGTGTAGGAACAGGTAGT 60.803 45.833 15.36 0.00 35.91 2.73
3380 3432 5.305585 CACAATGTGTAGGAACAGGTAGTT 58.694 41.667 5.00 0.00 44.93 2.24
3381 3433 5.763204 CACAATGTGTAGGAACAGGTAGTTT 59.237 40.000 5.00 0.00 41.51 2.66
3382 3434 6.262273 CACAATGTGTAGGAACAGGTAGTTTT 59.738 38.462 5.00 0.00 41.51 2.43
3383 3435 6.831868 ACAATGTGTAGGAACAGGTAGTTTTT 59.168 34.615 0.00 0.00 41.51 1.94
3406 3458 4.717279 TTTAAGGCAAGGAACAGGTAGT 57.283 40.909 0.00 0.00 0.00 2.73
3407 3459 4.717279 TTAAGGCAAGGAACAGGTAGTT 57.283 40.909 0.00 0.00 44.93 2.24
3408 3460 2.568623 AGGCAAGGAACAGGTAGTTG 57.431 50.000 0.00 0.00 41.51 3.16
3409 3461 2.054799 AGGCAAGGAACAGGTAGTTGA 58.945 47.619 0.00 0.00 41.51 3.18
3410 3462 2.152016 GGCAAGGAACAGGTAGTTGAC 58.848 52.381 0.00 0.00 41.51 3.18
3411 3463 2.224548 GGCAAGGAACAGGTAGTTGACT 60.225 50.000 0.00 0.00 41.51 3.41
3412 3464 3.477530 GCAAGGAACAGGTAGTTGACTT 58.522 45.455 0.00 0.00 41.51 3.01
3413 3465 3.883489 GCAAGGAACAGGTAGTTGACTTT 59.117 43.478 0.00 0.00 41.51 2.66
3414 3466 4.338400 GCAAGGAACAGGTAGTTGACTTTT 59.662 41.667 0.00 0.00 41.51 2.27
3415 3467 5.163550 GCAAGGAACAGGTAGTTGACTTTTT 60.164 40.000 0.00 0.00 41.51 1.94
3447 3499 9.869757 GAAATACCAAGCTTTATTATTTGTGGT 57.130 29.630 16.20 11.37 41.00 4.16
3449 3501 9.651913 AATACCAAGCTTTATTATTTGTGGTTG 57.348 29.630 4.82 0.00 38.93 3.77
3450 3502 6.966435 CCAAGCTTTATTATTTGTGGTTGG 57.034 37.500 0.00 0.00 43.35 3.77
3451 3503 5.351189 CCAAGCTTTATTATTTGTGGTTGGC 59.649 40.000 0.00 0.00 43.02 4.52
3452 3504 5.084818 AGCTTTATTATTTGTGGTTGGCC 57.915 39.130 0.00 0.00 0.00 5.36
3453 3505 4.081142 AGCTTTATTATTTGTGGTTGGCCC 60.081 41.667 0.00 0.00 0.00 5.80
3454 3506 4.429108 CTTTATTATTTGTGGTTGGCCCG 58.571 43.478 0.00 0.00 35.15 6.13
3455 3507 2.223803 ATTATTTGTGGTTGGCCCGA 57.776 45.000 0.00 0.00 35.15 5.14
3456 3508 1.249407 TTATTTGTGGTTGGCCCGAC 58.751 50.000 0.00 0.00 35.15 4.79
3457 3509 0.609681 TATTTGTGGTTGGCCCGACC 60.610 55.000 13.82 13.82 38.36 4.79
3465 3517 2.271821 TGGCCCGACCACATGATG 59.728 61.111 0.00 0.00 46.36 3.07
3466 3518 3.211963 GGCCCGACCACATGATGC 61.212 66.667 0.00 0.00 38.86 3.91
3467 3519 3.211963 GCCCGACCACATGATGCC 61.212 66.667 0.00 0.00 0.00 4.40
3468 3520 2.516930 CCCGACCACATGATGCCC 60.517 66.667 0.00 0.00 0.00 5.36
3469 3521 2.591753 CCGACCACATGATGCCCT 59.408 61.111 0.00 0.00 0.00 5.19
3470 3522 1.820906 CCGACCACATGATGCCCTG 60.821 63.158 0.00 0.00 0.00 4.45
3471 3523 1.221566 CGACCACATGATGCCCTGA 59.778 57.895 0.00 0.00 0.00 3.86
3472 3524 0.179037 CGACCACATGATGCCCTGAT 60.179 55.000 0.00 0.00 0.00 2.90
3473 3525 1.602311 GACCACATGATGCCCTGATC 58.398 55.000 0.00 0.00 0.00 2.92
3474 3526 1.142465 GACCACATGATGCCCTGATCT 59.858 52.381 0.00 0.00 0.00 2.75
3475 3527 2.369860 GACCACATGATGCCCTGATCTA 59.630 50.000 0.00 0.00 0.00 1.98
3476 3528 2.779430 ACCACATGATGCCCTGATCTAA 59.221 45.455 0.00 0.00 0.00 2.10
3477 3529 3.202818 ACCACATGATGCCCTGATCTAAA 59.797 43.478 0.00 0.00 0.00 1.85
3478 3530 3.819337 CCACATGATGCCCTGATCTAAAG 59.181 47.826 0.00 0.00 0.00 1.85
3479 3531 4.445305 CCACATGATGCCCTGATCTAAAGA 60.445 45.833 0.00 0.00 0.00 2.52
3480 3532 5.128205 CACATGATGCCCTGATCTAAAGAA 58.872 41.667 0.00 0.00 0.00 2.52
3481 3533 5.768662 CACATGATGCCCTGATCTAAAGAAT 59.231 40.000 0.00 0.00 0.00 2.40
3482 3534 6.002704 ACATGATGCCCTGATCTAAAGAATC 58.997 40.000 0.00 0.00 0.00 2.52
3483 3535 4.635223 TGATGCCCTGATCTAAAGAATCG 58.365 43.478 0.00 0.00 0.00 3.34
3484 3536 2.838736 TGCCCTGATCTAAAGAATCGC 58.161 47.619 0.00 0.00 0.00 4.58
3485 3537 2.435805 TGCCCTGATCTAAAGAATCGCT 59.564 45.455 0.00 0.00 0.00 4.93
3486 3538 3.118261 TGCCCTGATCTAAAGAATCGCTT 60.118 43.478 0.00 0.00 38.88 4.68
3487 3539 3.496507 GCCCTGATCTAAAGAATCGCTTC 59.503 47.826 0.00 0.00 35.24 3.86
3488 3540 4.697514 CCCTGATCTAAAGAATCGCTTCA 58.302 43.478 1.35 0.00 35.24 3.02
3489 3541 5.303971 CCCTGATCTAAAGAATCGCTTCAT 58.696 41.667 1.35 0.00 35.24 2.57
3490 3542 5.178996 CCCTGATCTAAAGAATCGCTTCATG 59.821 44.000 1.35 0.00 35.24 3.07
3491 3543 5.987953 CCTGATCTAAAGAATCGCTTCATGA 59.012 40.000 1.35 0.00 35.24 3.07
3492 3544 6.145858 CCTGATCTAAAGAATCGCTTCATGAG 59.854 42.308 1.35 0.00 35.24 2.90
3493 3545 6.809869 TGATCTAAAGAATCGCTTCATGAGA 58.190 36.000 1.35 0.00 35.24 3.27
3494 3546 6.699204 TGATCTAAAGAATCGCTTCATGAGAC 59.301 38.462 1.35 0.00 35.24 3.36
3495 3547 5.965922 TCTAAAGAATCGCTTCATGAGACA 58.034 37.500 1.35 0.00 35.24 3.41
3496 3548 6.577103 TCTAAAGAATCGCTTCATGAGACAT 58.423 36.000 1.35 0.00 35.24 3.06
3497 3549 7.716612 TCTAAAGAATCGCTTCATGAGACATA 58.283 34.615 1.35 0.00 35.24 2.29
3498 3550 6.841443 AAAGAATCGCTTCATGAGACATAG 57.159 37.500 1.35 0.00 35.24 2.23
3499 3551 5.781210 AGAATCGCTTCATGAGACATAGA 57.219 39.130 1.35 0.00 33.56 1.98
3500 3552 6.343716 AGAATCGCTTCATGAGACATAGAT 57.656 37.500 1.35 0.00 33.56 1.98
3501 3553 6.757237 AGAATCGCTTCATGAGACATAGATT 58.243 36.000 1.35 3.48 33.56 2.40
3502 3554 7.890515 AGAATCGCTTCATGAGACATAGATTA 58.109 34.615 1.35 0.00 33.56 1.75
3503 3555 8.530311 AGAATCGCTTCATGAGACATAGATTAT 58.470 33.333 1.35 0.00 33.56 1.28
3504 3556 9.149225 GAATCGCTTCATGAGACATAGATTATT 57.851 33.333 0.00 0.00 0.00 1.40
3505 3557 9.499479 AATCGCTTCATGAGACATAGATTATTT 57.501 29.630 0.00 0.00 0.00 1.40
3506 3558 8.526218 TCGCTTCATGAGACATAGATTATTTC 57.474 34.615 0.00 0.00 0.00 2.17
3507 3559 8.143835 TCGCTTCATGAGACATAGATTATTTCA 58.856 33.333 0.00 0.00 0.00 2.69
3508 3560 8.933807 CGCTTCATGAGACATAGATTATTTCAT 58.066 33.333 0.00 0.00 0.00 2.57
3685 3744 4.043140 ACAAATTTTGGAAAGCGGGAACG 61.043 43.478 13.42 0.00 46.81 3.95
3726 3786 7.945326 TTTTTGACAAATGCGAACAATTTTC 57.055 28.000 0.50 0.00 0.00 2.29
3876 3936 8.924691 TGAACAAAAATTGAAACTCTGAACAAG 58.075 29.630 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.562892 CGTCTTTGCCTTTGATGATCTTATTAT 58.437 33.333 0.00 0.00 0.00 1.28
28 29 7.012327 CCGTCTTTGCCTTTGATGATCTTATTA 59.988 37.037 0.00 0.00 0.00 0.98
29 30 6.183360 CCGTCTTTGCCTTTGATGATCTTATT 60.183 38.462 0.00 0.00 0.00 1.40
75 76 0.111446 TTCGACCTTTGGCAATGGGA 59.889 50.000 29.18 18.13 0.00 4.37
102 103 3.432517 AGCTTTACTCGCTCTGCAG 57.567 52.632 7.63 7.63 30.49 4.41
302 315 9.495754 GTCTTTGTATGTCTAGCATTTTTGATC 57.504 33.333 5.22 0.00 38.94 2.92
304 317 8.621532 AGTCTTTGTATGTCTAGCATTTTTGA 57.378 30.769 5.22 0.00 38.94 2.69
307 320 9.502091 TGTAAGTCTTTGTATGTCTAGCATTTT 57.498 29.630 5.22 0.00 38.94 1.82
308 321 8.936864 GTGTAAGTCTTTGTATGTCTAGCATTT 58.063 33.333 5.22 0.00 38.94 2.32
309 322 7.275779 CGTGTAAGTCTTTGTATGTCTAGCATT 59.724 37.037 5.22 0.00 38.94 3.56
310 323 6.752351 CGTGTAAGTCTTTGTATGTCTAGCAT 59.248 38.462 0.00 5.25 41.42 3.79
311 324 6.090783 CGTGTAAGTCTTTGTATGTCTAGCA 58.909 40.000 0.00 0.00 0.00 3.49
312 325 5.004535 GCGTGTAAGTCTTTGTATGTCTAGC 59.995 44.000 0.00 0.00 0.00 3.42
313 326 6.323266 AGCGTGTAAGTCTTTGTATGTCTAG 58.677 40.000 0.00 0.00 0.00 2.43
314 327 6.263516 AGCGTGTAAGTCTTTGTATGTCTA 57.736 37.500 0.00 0.00 0.00 2.59
315 328 5.135508 AGCGTGTAAGTCTTTGTATGTCT 57.864 39.130 0.00 0.00 0.00 3.41
316 329 5.840940 AAGCGTGTAAGTCTTTGTATGTC 57.159 39.130 0.00 0.00 0.00 3.06
317 330 6.613755 AAAAGCGTGTAAGTCTTTGTATGT 57.386 33.333 0.00 0.00 31.21 2.29
318 331 7.529519 GTGTAAAAGCGTGTAAGTCTTTGTATG 59.470 37.037 0.00 0.00 31.21 2.39
319 332 7.568134 CGTGTAAAAGCGTGTAAGTCTTTGTAT 60.568 37.037 0.00 0.00 31.21 2.29
320 333 6.291743 CGTGTAAAAGCGTGTAAGTCTTTGTA 60.292 38.462 0.00 0.00 31.21 2.41
321 334 5.501252 CGTGTAAAAGCGTGTAAGTCTTTGT 60.501 40.000 0.00 0.00 31.21 2.83
322 335 4.896238 CGTGTAAAAGCGTGTAAGTCTTTG 59.104 41.667 0.00 0.00 31.21 2.77
323 336 4.551410 GCGTGTAAAAGCGTGTAAGTCTTT 60.551 41.667 0.00 0.00 0.00 2.52
324 337 3.060070 GCGTGTAAAAGCGTGTAAGTCTT 60.060 43.478 0.00 0.00 0.00 3.01
325 338 2.473984 GCGTGTAAAAGCGTGTAAGTCT 59.526 45.455 0.00 0.00 0.00 3.24
326 339 2.473984 AGCGTGTAAAAGCGTGTAAGTC 59.526 45.455 0.00 0.00 38.61 3.01
327 340 2.473984 GAGCGTGTAAAAGCGTGTAAGT 59.526 45.455 0.00 0.00 38.61 2.24
328 341 2.159881 GGAGCGTGTAAAAGCGTGTAAG 60.160 50.000 0.00 0.00 38.61 2.34
329 342 1.794116 GGAGCGTGTAAAAGCGTGTAA 59.206 47.619 0.00 0.00 38.61 2.41
330 343 1.000060 AGGAGCGTGTAAAAGCGTGTA 60.000 47.619 0.00 0.00 38.61 2.90
331 344 0.249741 AGGAGCGTGTAAAAGCGTGT 60.250 50.000 0.00 0.00 38.61 4.49
332 345 0.865769 AAGGAGCGTGTAAAAGCGTG 59.134 50.000 0.00 0.00 38.61 5.34
333 346 1.145803 GAAGGAGCGTGTAAAAGCGT 58.854 50.000 0.00 0.00 38.61 5.07
334 347 0.442699 GGAAGGAGCGTGTAAAAGCG 59.557 55.000 0.00 0.00 38.61 4.68
335 348 1.519408 TGGAAGGAGCGTGTAAAAGC 58.481 50.000 0.00 0.00 0.00 3.51
336 349 3.600388 AGATGGAAGGAGCGTGTAAAAG 58.400 45.455 0.00 0.00 0.00 2.27
337 350 3.695830 AGATGGAAGGAGCGTGTAAAA 57.304 42.857 0.00 0.00 0.00 1.52
338 351 4.020928 TGTTAGATGGAAGGAGCGTGTAAA 60.021 41.667 0.00 0.00 0.00 2.01
339 352 3.512329 TGTTAGATGGAAGGAGCGTGTAA 59.488 43.478 0.00 0.00 0.00 2.41
340 353 3.093814 TGTTAGATGGAAGGAGCGTGTA 58.906 45.455 0.00 0.00 0.00 2.90
341 354 1.899814 TGTTAGATGGAAGGAGCGTGT 59.100 47.619 0.00 0.00 0.00 4.49
342 355 2.672961 TGTTAGATGGAAGGAGCGTG 57.327 50.000 0.00 0.00 0.00 5.34
343 356 3.197766 TGATTGTTAGATGGAAGGAGCGT 59.802 43.478 0.00 0.00 0.00 5.07
344 357 3.797039 TGATTGTTAGATGGAAGGAGCG 58.203 45.455 0.00 0.00 0.00 5.03
345 358 5.824624 TGATTGATTGTTAGATGGAAGGAGC 59.175 40.000 0.00 0.00 0.00 4.70
346 359 6.825213 TGTGATTGATTGTTAGATGGAAGGAG 59.175 38.462 0.00 0.00 0.00 3.69
347 360 6.720309 TGTGATTGATTGTTAGATGGAAGGA 58.280 36.000 0.00 0.00 0.00 3.36
348 361 7.395190 TTGTGATTGATTGTTAGATGGAAGG 57.605 36.000 0.00 0.00 0.00 3.46
349 362 7.756722 GGTTTGTGATTGATTGTTAGATGGAAG 59.243 37.037 0.00 0.00 0.00 3.46
350 363 7.451255 AGGTTTGTGATTGATTGTTAGATGGAA 59.549 33.333 0.00 0.00 0.00 3.53
351 364 6.947733 AGGTTTGTGATTGATTGTTAGATGGA 59.052 34.615 0.00 0.00 0.00 3.41
352 365 7.161773 AGGTTTGTGATTGATTGTTAGATGG 57.838 36.000 0.00 0.00 0.00 3.51
353 366 7.756722 GGAAGGTTTGTGATTGATTGTTAGATG 59.243 37.037 0.00 0.00 0.00 2.90
354 367 7.451255 TGGAAGGTTTGTGATTGATTGTTAGAT 59.549 33.333 0.00 0.00 0.00 1.98
355 368 6.775142 TGGAAGGTTTGTGATTGATTGTTAGA 59.225 34.615 0.00 0.00 0.00 2.10
356 369 6.863126 GTGGAAGGTTTGTGATTGATTGTTAG 59.137 38.462 0.00 0.00 0.00 2.34
357 370 6.549364 AGTGGAAGGTTTGTGATTGATTGTTA 59.451 34.615 0.00 0.00 0.00 2.41
358 371 5.363580 AGTGGAAGGTTTGTGATTGATTGTT 59.636 36.000 0.00 0.00 0.00 2.83
359 372 4.895297 AGTGGAAGGTTTGTGATTGATTGT 59.105 37.500 0.00 0.00 0.00 2.71
360 373 5.458041 AGTGGAAGGTTTGTGATTGATTG 57.542 39.130 0.00 0.00 0.00 2.67
361 374 4.524328 GGAGTGGAAGGTTTGTGATTGATT 59.476 41.667 0.00 0.00 0.00 2.57
362 375 4.082125 GGAGTGGAAGGTTTGTGATTGAT 58.918 43.478 0.00 0.00 0.00 2.57
363 376 3.138283 AGGAGTGGAAGGTTTGTGATTGA 59.862 43.478 0.00 0.00 0.00 2.57
364 377 3.254166 CAGGAGTGGAAGGTTTGTGATTG 59.746 47.826 0.00 0.00 0.00 2.67
365 378 3.138283 TCAGGAGTGGAAGGTTTGTGATT 59.862 43.478 0.00 0.00 0.00 2.57
366 379 2.711009 TCAGGAGTGGAAGGTTTGTGAT 59.289 45.455 0.00 0.00 0.00 3.06
367 380 2.123589 TCAGGAGTGGAAGGTTTGTGA 58.876 47.619 0.00 0.00 0.00 3.58
368 381 2.638480 TCAGGAGTGGAAGGTTTGTG 57.362 50.000 0.00 0.00 0.00 3.33
369 382 3.884037 AATCAGGAGTGGAAGGTTTGT 57.116 42.857 0.00 0.00 0.00 2.83
370 383 3.507622 GGAAATCAGGAGTGGAAGGTTTG 59.492 47.826 0.00 0.00 0.00 2.93
371 384 3.140144 TGGAAATCAGGAGTGGAAGGTTT 59.860 43.478 0.00 0.00 0.00 3.27
372 385 2.716424 TGGAAATCAGGAGTGGAAGGTT 59.284 45.455 0.00 0.00 0.00 3.50
373 386 2.307098 CTGGAAATCAGGAGTGGAAGGT 59.693 50.000 0.00 0.00 39.76 3.50
374 387 2.573462 TCTGGAAATCAGGAGTGGAAGG 59.427 50.000 0.00 0.00 43.53 3.46
375 388 3.517100 TCTCTGGAAATCAGGAGTGGAAG 59.483 47.826 0.00 0.00 43.53 3.46
376 389 3.517100 CTCTCTGGAAATCAGGAGTGGAA 59.483 47.826 0.00 0.00 43.53 3.53
377 390 3.102972 CTCTCTGGAAATCAGGAGTGGA 58.897 50.000 0.00 0.00 43.53 4.02
378 391 2.170187 CCTCTCTGGAAATCAGGAGTGG 59.830 54.545 0.00 0.00 43.53 4.00
379 392 2.836981 ACCTCTCTGGAAATCAGGAGTG 59.163 50.000 0.00 0.00 43.53 3.51
380 393 2.836981 CACCTCTCTGGAAATCAGGAGT 59.163 50.000 0.00 0.00 43.53 3.85
381 394 2.170187 CCACCTCTCTGGAAATCAGGAG 59.830 54.545 0.00 0.00 43.53 3.69
382 395 2.191400 CCACCTCTCTGGAAATCAGGA 58.809 52.381 0.00 0.00 43.53 3.86
383 396 1.211457 CCCACCTCTCTGGAAATCAGG 59.789 57.143 0.00 0.00 43.53 3.86
384 397 1.407989 GCCCACCTCTCTGGAAATCAG 60.408 57.143 0.00 0.00 44.68 2.90
385 398 0.620556 GCCCACCTCTCTGGAAATCA 59.379 55.000 0.00 0.00 39.71 2.57
386 399 0.106967 GGCCCACCTCTCTGGAAATC 60.107 60.000 0.00 0.00 39.71 2.17
387 400 1.915078 CGGCCCACCTCTCTGGAAAT 61.915 60.000 0.00 0.00 39.71 2.17
388 401 2.592993 CGGCCCACCTCTCTGGAAA 61.593 63.158 0.00 0.00 39.71 3.13
389 402 3.003173 CGGCCCACCTCTCTGGAA 61.003 66.667 0.00 0.00 39.71 3.53
403 416 3.043999 AATAGGTGAGTGGGGCGGC 62.044 63.158 0.00 0.00 0.00 6.53
404 417 1.153168 CAATAGGTGAGTGGGGCGG 60.153 63.158 0.00 0.00 0.00 6.13
405 418 0.462047 GTCAATAGGTGAGTGGGGCG 60.462 60.000 0.00 0.00 36.74 6.13
406 419 0.107165 GGTCAATAGGTGAGTGGGGC 60.107 60.000 0.00 0.00 36.74 5.80
407 420 1.285280 TGGTCAATAGGTGAGTGGGG 58.715 55.000 0.00 0.00 36.74 4.96
408 421 3.054434 TGATTGGTCAATAGGTGAGTGGG 60.054 47.826 0.00 0.00 36.74 4.61
409 422 4.220693 TGATTGGTCAATAGGTGAGTGG 57.779 45.455 0.00 0.00 36.74 4.00
410 423 5.707298 ACTTTGATTGGTCAATAGGTGAGTG 59.293 40.000 0.00 0.00 43.49 3.51
411 424 5.880901 ACTTTGATTGGTCAATAGGTGAGT 58.119 37.500 0.00 0.00 43.49 3.41
412 425 6.824305 AACTTTGATTGGTCAATAGGTGAG 57.176 37.500 0.00 0.00 43.49 3.51
413 426 7.721842 TGTTAACTTTGATTGGTCAATAGGTGA 59.278 33.333 7.22 0.00 43.49 4.02
414 427 7.881142 TGTTAACTTTGATTGGTCAATAGGTG 58.119 34.615 7.22 0.00 43.49 4.00
415 428 8.472007 TTGTTAACTTTGATTGGTCAATAGGT 57.528 30.769 7.22 0.00 43.49 3.08
416 429 9.927668 AATTGTTAACTTTGATTGGTCAATAGG 57.072 29.630 7.22 0.00 43.49 2.57
419 432 9.480053 CAGAATTGTTAACTTTGATTGGTCAAT 57.520 29.630 7.22 0.00 43.49 2.57
420 433 8.474025 ACAGAATTGTTAACTTTGATTGGTCAA 58.526 29.630 7.22 0.00 37.07 3.18
421 434 8.006298 ACAGAATTGTTAACTTTGATTGGTCA 57.994 30.769 7.22 0.00 32.28 4.02
422 435 9.959749 TTACAGAATTGTTAACTTTGATTGGTC 57.040 29.630 7.22 0.00 38.76 4.02
427 440 9.476202 GGCTTTTACAGAATTGTTAACTTTGAT 57.524 29.630 7.22 0.00 38.76 2.57
428 441 8.691797 AGGCTTTTACAGAATTGTTAACTTTGA 58.308 29.630 7.22 0.00 38.76 2.69
429 442 8.755018 CAGGCTTTTACAGAATTGTTAACTTTG 58.245 33.333 7.22 1.25 38.76 2.77
430 443 8.474831 ACAGGCTTTTACAGAATTGTTAACTTT 58.525 29.630 7.22 0.65 38.76 2.66
431 444 8.007405 ACAGGCTTTTACAGAATTGTTAACTT 57.993 30.769 7.22 0.00 38.76 2.66
432 445 7.582667 ACAGGCTTTTACAGAATTGTTAACT 57.417 32.000 7.22 0.00 38.76 2.24
433 446 9.738832 TTTACAGGCTTTTACAGAATTGTTAAC 57.261 29.630 0.00 0.00 38.76 2.01
436 449 7.807907 CGATTTACAGGCTTTTACAGAATTGTT 59.192 33.333 0.00 0.00 38.76 2.83
437 450 7.040686 ACGATTTACAGGCTTTTACAGAATTGT 60.041 33.333 0.00 0.00 41.39 2.71
438 451 7.305474 ACGATTTACAGGCTTTTACAGAATTG 58.695 34.615 0.00 0.00 0.00 2.32
439 452 7.448748 ACGATTTACAGGCTTTTACAGAATT 57.551 32.000 0.00 0.00 0.00 2.17
440 453 7.448748 AACGATTTACAGGCTTTTACAGAAT 57.551 32.000 0.00 0.00 0.00 2.40
441 454 6.870971 AACGATTTACAGGCTTTTACAGAA 57.129 33.333 0.00 0.00 0.00 3.02
442 455 6.261381 ACAAACGATTTACAGGCTTTTACAGA 59.739 34.615 0.00 0.00 0.00 3.41
443 456 6.435428 ACAAACGATTTACAGGCTTTTACAG 58.565 36.000 0.00 0.00 0.00 2.74
444 457 6.380095 ACAAACGATTTACAGGCTTTTACA 57.620 33.333 0.00 0.00 0.00 2.41
445 458 7.771219 GTACAAACGATTTACAGGCTTTTAC 57.229 36.000 0.00 0.00 0.00 2.01
462 475 2.723618 CGGCAATGCTACACGTACAAAC 60.724 50.000 4.82 0.00 0.00 2.93
463 476 1.461512 CGGCAATGCTACACGTACAAA 59.538 47.619 4.82 0.00 0.00 2.83
464 477 1.072391 CGGCAATGCTACACGTACAA 58.928 50.000 4.82 0.00 0.00 2.41
465 478 0.244178 TCGGCAATGCTACACGTACA 59.756 50.000 4.82 0.00 0.00 2.90
466 479 1.567504 ATCGGCAATGCTACACGTAC 58.432 50.000 4.82 0.00 0.00 3.67
467 480 3.653539 ATATCGGCAATGCTACACGTA 57.346 42.857 4.82 0.00 0.00 3.57
468 481 2.526304 ATATCGGCAATGCTACACGT 57.474 45.000 4.82 0.00 0.00 4.49
469 482 4.234574 TCTTATATCGGCAATGCTACACG 58.765 43.478 4.82 0.00 0.00 4.49
470 483 7.036220 AGTATCTTATATCGGCAATGCTACAC 58.964 38.462 4.82 0.00 0.00 2.90
471 484 7.170393 AGTATCTTATATCGGCAATGCTACA 57.830 36.000 4.82 0.00 0.00 2.74
472 485 8.622157 TCTAGTATCTTATATCGGCAATGCTAC 58.378 37.037 4.82 0.00 0.00 3.58
473 486 8.747538 TCTAGTATCTTATATCGGCAATGCTA 57.252 34.615 4.82 0.00 0.00 3.49
474 487 7.340743 ACTCTAGTATCTTATATCGGCAATGCT 59.659 37.037 4.82 0.00 0.00 3.79
475 488 7.484975 ACTCTAGTATCTTATATCGGCAATGC 58.515 38.462 0.00 0.00 0.00 3.56
476 489 9.295214 CAACTCTAGTATCTTATATCGGCAATG 57.705 37.037 0.00 0.00 0.00 2.82
477 490 9.244292 TCAACTCTAGTATCTTATATCGGCAAT 57.756 33.333 0.00 0.00 0.00 3.56
478 491 8.512956 GTCAACTCTAGTATCTTATATCGGCAA 58.487 37.037 0.00 0.00 0.00 4.52
479 492 7.120873 GGTCAACTCTAGTATCTTATATCGGCA 59.879 40.741 0.00 0.00 0.00 5.69
480 493 7.337436 AGGTCAACTCTAGTATCTTATATCGGC 59.663 40.741 0.00 0.00 0.00 5.54
481 494 8.670135 CAGGTCAACTCTAGTATCTTATATCGG 58.330 40.741 0.00 0.00 0.00 4.18
482 495 9.438228 TCAGGTCAACTCTAGTATCTTATATCG 57.562 37.037 0.00 0.00 0.00 2.92
485 498 9.916360 TTGTCAGGTCAACTCTAGTATCTTATA 57.084 33.333 0.00 0.00 0.00 0.98
486 499 8.824756 TTGTCAGGTCAACTCTAGTATCTTAT 57.175 34.615 0.00 0.00 0.00 1.73
487 500 8.824756 ATTGTCAGGTCAACTCTAGTATCTTA 57.175 34.615 0.00 0.00 0.00 2.10
488 501 7.726033 ATTGTCAGGTCAACTCTAGTATCTT 57.274 36.000 0.00 0.00 0.00 2.40
489 502 7.504238 CCTATTGTCAGGTCAACTCTAGTATCT 59.496 40.741 0.00 0.00 0.00 1.98
490 503 7.285858 ACCTATTGTCAGGTCAACTCTAGTATC 59.714 40.741 0.00 0.00 46.34 2.24
491 504 7.126733 ACCTATTGTCAGGTCAACTCTAGTAT 58.873 38.462 0.00 0.00 46.34 2.12
492 505 6.491383 ACCTATTGTCAGGTCAACTCTAGTA 58.509 40.000 0.00 0.00 46.34 1.82
493 506 5.334421 ACCTATTGTCAGGTCAACTCTAGT 58.666 41.667 0.00 0.00 46.34 2.57
494 507 5.923733 ACCTATTGTCAGGTCAACTCTAG 57.076 43.478 0.00 0.00 46.34 2.43
513 527 5.337975 GCTCCAGAGTGAAAGATAAGAACCT 60.338 44.000 0.00 0.00 0.00 3.50
515 529 4.873259 GGCTCCAGAGTGAAAGATAAGAAC 59.127 45.833 0.00 0.00 0.00 3.01
561 578 1.208052 TGACTATGCACAGAAGAGCCC 59.792 52.381 0.00 0.00 0.00 5.19
562 579 2.680312 TGACTATGCACAGAAGAGCC 57.320 50.000 0.00 0.00 0.00 4.70
571 588 5.351465 TCCGAGAAGATTTTTGACTATGCAC 59.649 40.000 0.00 0.00 0.00 4.57
591 608 3.385384 CTGTCTGCCTGCCTCCGA 61.385 66.667 0.00 0.00 0.00 4.55
601 618 0.389687 GCACCTGTCTCTCTGTCTGC 60.390 60.000 0.00 0.00 0.00 4.26
609 626 1.846007 CTACTCCTGCACCTGTCTCT 58.154 55.000 0.00 0.00 0.00 3.10
632 649 1.394917 CTGAATCGGTTGAGGCTTTCG 59.605 52.381 0.00 0.00 0.00 3.46
753 781 4.386049 GGTTGATTCAGACGTGAACTACAG 59.614 45.833 0.00 0.00 45.58 2.74
773 801 3.016736 GTGCTGGTAGTATGCATTGGTT 58.983 45.455 3.54 0.00 39.00 3.67
814 842 2.091994 GCCACCAGGTAGTAGTAGGAGA 60.092 54.545 0.00 0.00 37.19 3.71
817 845 1.411041 GGCCACCAGGTAGTAGTAGG 58.589 60.000 0.00 0.00 37.19 3.18
854 882 4.157656 CGGGAAAGCAAGAAACCATGATAA 59.842 41.667 0.00 0.00 0.00 1.75
928 959 8.661257 CGATCAGAGTATAGACTAATGTTCGAT 58.339 37.037 20.35 5.27 41.56 3.59
931 962 8.325421 TCCGATCAGAGTATAGACTAATGTTC 57.675 38.462 0.00 0.00 35.45 3.18
947 978 3.785486 CATACACTTGCTTCCGATCAGA 58.215 45.455 0.00 0.00 0.00 3.27
965 996 0.738975 AACTCGCGTCAGCTAGCATA 59.261 50.000 18.83 0.43 39.51 3.14
1110 1141 3.760035 TCGCGGAACTCCTCCAGC 61.760 66.667 6.13 0.00 45.74 4.85
1623 1654 2.904866 TTGTGGCCGAAAGCGCTT 60.905 55.556 18.98 18.98 45.17 4.68
1680 1711 2.261671 GCTGAGAGCGAACCCGAA 59.738 61.111 0.00 0.00 38.22 4.30
1691 1722 2.775856 GCTCCATCGTCGGCTGAGA 61.776 63.158 0.00 0.00 0.00 3.27
1857 1888 1.817099 CAGGAAGATGAGCACGGCC 60.817 63.158 0.00 0.00 0.00 6.13
1896 1927 2.637383 GCCACCGAGACGAACCTCT 61.637 63.158 0.00 0.00 0.00 3.69
1941 1972 4.415881 TTGCTCGGCTTTATCCTTGATA 57.584 40.909 0.00 0.00 0.00 2.15
1963 1994 2.256591 CGCTGCCACTCAACTTGCT 61.257 57.895 0.00 0.00 0.00 3.91
2106 2137 2.445845 TAGGTGATCCCCAGCCGG 60.446 66.667 0.00 0.00 44.01 6.13
2146 2177 4.415332 CACCAGGACGACGACGGG 62.415 72.222 12.58 6.89 44.46 5.28
2150 2181 2.649034 GCTTCACCAGGACGACGA 59.351 61.111 0.00 0.00 0.00 4.20
2170 2201 2.902419 CGTGACCCATGTTGCGCAA 61.902 57.895 21.02 21.02 0.00 4.85
2385 2435 6.828273 CCATGGAACTAATGGACAAGTTATCA 59.172 38.462 5.56 0.00 46.44 2.15
2386 2436 6.238759 GCCATGGAACTAATGGACAAGTTATC 60.239 42.308 18.40 0.00 46.44 1.75
2387 2437 5.594317 GCCATGGAACTAATGGACAAGTTAT 59.406 40.000 18.40 0.00 46.44 1.89
2388 2438 4.947388 GCCATGGAACTAATGGACAAGTTA 59.053 41.667 18.40 0.00 46.44 2.24
2389 2439 3.763897 GCCATGGAACTAATGGACAAGTT 59.236 43.478 18.40 0.00 46.44 2.66
2390 2440 3.356290 GCCATGGAACTAATGGACAAGT 58.644 45.455 18.40 0.00 46.44 3.16
2391 2441 2.355756 CGCCATGGAACTAATGGACAAG 59.644 50.000 18.40 0.00 46.44 3.16
2392 2442 2.026729 TCGCCATGGAACTAATGGACAA 60.027 45.455 18.40 0.00 46.44 3.18
2393 2443 1.557371 TCGCCATGGAACTAATGGACA 59.443 47.619 18.40 0.00 46.44 4.02
2394 2444 2.325583 TCGCCATGGAACTAATGGAC 57.674 50.000 18.40 0.00 46.44 4.02
2395 2445 3.576078 AATCGCCATGGAACTAATGGA 57.424 42.857 18.40 0.00 46.44 3.41
2396 2446 3.243501 CCAAATCGCCATGGAACTAATGG 60.244 47.826 18.40 11.92 46.29 3.16
2397 2447 3.381272 ACCAAATCGCCATGGAACTAATG 59.619 43.478 18.40 6.41 39.12 1.90
2398 2448 3.381272 CACCAAATCGCCATGGAACTAAT 59.619 43.478 18.40 0.00 39.12 1.73
2399 2449 2.752354 CACCAAATCGCCATGGAACTAA 59.248 45.455 18.40 0.00 39.12 2.24
2404 2454 0.617935 TCTCACCAAATCGCCATGGA 59.382 50.000 18.40 0.00 39.12 3.41
2558 2609 1.663173 CCGGTGGAAAAACGGCATT 59.337 52.632 0.00 0.00 41.23 3.56
3169 3220 5.878116 TCCGAGAAGAAAGAGAAACACAAAA 59.122 36.000 0.00 0.00 0.00 2.44
3209 3261 1.027357 GAGTAGTACGCCCCAATCGA 58.973 55.000 0.00 0.00 0.00 3.59
3215 3267 2.124151 TCCGGAGTAGTACGCCCC 60.124 66.667 16.45 8.12 34.31 5.80
3217 3269 1.382692 AAGCTCCGGAGTAGTACGCC 61.383 60.000 31.43 12.73 34.50 5.68
3219 3271 2.015587 AGAAAGCTCCGGAGTAGTACG 58.984 52.381 31.43 6.80 0.00 3.67
3228 3280 1.941325 AAGCGATTAGAAAGCTCCGG 58.059 50.000 0.00 0.00 40.78 5.14
3231 3283 4.348198 AGCAAAAGCGATTAGAAAGCTC 57.652 40.909 0.00 0.00 40.78 4.09
3236 3288 7.139896 TGACATTTAGCAAAAGCGATTAGAA 57.860 32.000 0.00 0.00 0.00 2.10
3245 3297 3.256631 AGGTGCCTGACATTTAGCAAAAG 59.743 43.478 0.00 0.00 36.91 2.27
3254 3306 4.101430 ACAAAATTTGAGGTGCCTGACATT 59.899 37.500 13.19 0.00 0.00 2.71
3255 3307 3.642848 ACAAAATTTGAGGTGCCTGACAT 59.357 39.130 13.19 0.00 0.00 3.06
3256 3308 3.030291 ACAAAATTTGAGGTGCCTGACA 58.970 40.909 13.19 0.00 0.00 3.58
3257 3309 3.733443 ACAAAATTTGAGGTGCCTGAC 57.267 42.857 13.19 0.00 0.00 3.51
3258 3310 3.740764 GCAACAAAATTTGAGGTGCCTGA 60.741 43.478 18.35 0.00 33.56 3.86
3259 3311 2.545106 GCAACAAAATTTGAGGTGCCTG 59.455 45.455 18.35 2.42 33.56 4.85
3260 3312 2.170187 TGCAACAAAATTTGAGGTGCCT 59.830 40.909 23.36 0.00 36.43 4.75
3261 3313 2.559440 TGCAACAAAATTTGAGGTGCC 58.441 42.857 23.36 11.47 36.43 5.01
3262 3314 4.816786 ATTGCAACAAAATTTGAGGTGC 57.183 36.364 20.94 20.94 37.16 5.01
3263 3315 7.249147 TGAAAATTGCAACAAAATTTGAGGTG 58.751 30.769 13.19 8.29 37.32 4.00
3264 3316 7.121020 ACTGAAAATTGCAACAAAATTTGAGGT 59.879 29.630 13.19 0.00 37.32 3.85
3265 3317 7.474190 ACTGAAAATTGCAACAAAATTTGAGG 58.526 30.769 13.19 5.01 37.32 3.86
3266 3318 8.176365 TGACTGAAAATTGCAACAAAATTTGAG 58.824 29.630 13.19 5.04 37.32 3.02
3267 3319 8.037382 TGACTGAAAATTGCAACAAAATTTGA 57.963 26.923 13.19 0.00 37.32 2.69
3268 3320 8.670804 TTGACTGAAAATTGCAACAAAATTTG 57.329 26.923 0.00 3.89 37.32 2.32
3269 3321 9.688592 TTTTGACTGAAAATTGCAACAAAATTT 57.311 22.222 0.00 0.00 38.54 1.82
3270 3322 9.127006 GTTTTGACTGAAAATTGCAACAAAATT 57.873 25.926 17.72 0.91 35.96 1.82
3271 3323 8.513774 AGTTTTGACTGAAAATTGCAACAAAAT 58.486 25.926 17.72 8.79 35.96 1.82
3272 3324 7.869800 AGTTTTGACTGAAAATTGCAACAAAA 58.130 26.923 0.00 8.66 35.96 2.44
3273 3325 7.387397 AGAGTTTTGACTGAAAATTGCAACAAA 59.613 29.630 0.00 2.18 35.96 2.83
3274 3326 6.873076 AGAGTTTTGACTGAAAATTGCAACAA 59.127 30.769 0.00 0.00 35.96 2.83
3275 3327 6.397272 AGAGTTTTGACTGAAAATTGCAACA 58.603 32.000 0.00 0.00 35.96 3.33
3276 3328 6.531240 TGAGAGTTTTGACTGAAAATTGCAAC 59.469 34.615 0.00 0.00 35.96 4.17
3277 3329 6.531240 GTGAGAGTTTTGACTGAAAATTGCAA 59.469 34.615 0.00 0.00 35.96 4.08
3278 3330 6.035843 GTGAGAGTTTTGACTGAAAATTGCA 58.964 36.000 0.00 0.00 35.96 4.08
3279 3331 5.460091 GGTGAGAGTTTTGACTGAAAATTGC 59.540 40.000 0.00 0.00 35.96 3.56
3280 3332 5.682862 CGGTGAGAGTTTTGACTGAAAATTG 59.317 40.000 0.00 0.00 35.96 2.32
3281 3333 5.357032 ACGGTGAGAGTTTTGACTGAAAATT 59.643 36.000 0.00 0.00 35.96 1.82
3282 3334 4.881850 ACGGTGAGAGTTTTGACTGAAAAT 59.118 37.500 0.00 0.00 35.96 1.82
3283 3335 4.258543 ACGGTGAGAGTTTTGACTGAAAA 58.741 39.130 0.00 0.00 0.00 2.29
3284 3336 3.869065 ACGGTGAGAGTTTTGACTGAAA 58.131 40.909 0.00 0.00 0.00 2.69
3285 3337 3.454375 GACGGTGAGAGTTTTGACTGAA 58.546 45.455 0.00 0.00 0.00 3.02
3286 3338 2.223971 GGACGGTGAGAGTTTTGACTGA 60.224 50.000 0.00 0.00 0.00 3.41
3287 3339 2.135933 GGACGGTGAGAGTTTTGACTG 58.864 52.381 0.00 0.00 0.00 3.51
3288 3340 1.760613 TGGACGGTGAGAGTTTTGACT 59.239 47.619 0.00 0.00 0.00 3.41
3289 3341 2.234300 TGGACGGTGAGAGTTTTGAC 57.766 50.000 0.00 0.00 0.00 3.18
3290 3342 3.485463 AATGGACGGTGAGAGTTTTGA 57.515 42.857 0.00 0.00 0.00 2.69
3291 3343 3.315191 ACAAATGGACGGTGAGAGTTTTG 59.685 43.478 0.00 0.00 0.00 2.44
3292 3344 3.315191 CACAAATGGACGGTGAGAGTTTT 59.685 43.478 0.00 0.00 34.52 2.43
3293 3345 2.878406 CACAAATGGACGGTGAGAGTTT 59.122 45.455 0.00 0.00 34.52 2.66
3294 3346 2.494059 CACAAATGGACGGTGAGAGTT 58.506 47.619 0.00 0.00 34.52 3.01
3295 3347 2.169832 CACAAATGGACGGTGAGAGT 57.830 50.000 0.00 0.00 34.52 3.24
3334 3386 3.937706 CACAAAGCACCACAATGGAAAAA 59.062 39.130 0.84 0.00 40.96 1.94
3335 3387 3.529533 CACAAAGCACCACAATGGAAAA 58.470 40.909 0.84 0.00 40.96 2.29
3336 3388 2.741228 GCACAAAGCACCACAATGGAAA 60.741 45.455 0.84 0.00 41.23 3.13
3337 3389 1.202510 GCACAAAGCACCACAATGGAA 60.203 47.619 0.84 0.00 41.23 3.53
3338 3390 0.388659 GCACAAAGCACCACAATGGA 59.611 50.000 0.84 0.00 41.23 3.41
3339 3391 2.903284 GCACAAAGCACCACAATGG 58.097 52.632 0.00 0.00 45.02 3.16
3349 3401 2.293122 TCCTACACATTGTGCACAAAGC 59.707 45.455 34.06 0.00 45.96 3.51
3350 3402 4.202000 TGTTCCTACACATTGTGCACAAAG 60.202 41.667 34.06 30.88 39.55 2.77
3351 3403 3.696548 TGTTCCTACACATTGTGCACAAA 59.303 39.130 34.06 17.54 39.55 2.83
3352 3404 3.282885 TGTTCCTACACATTGTGCACAA 58.717 40.909 32.78 32.78 36.98 3.33
3353 3405 2.877786 CTGTTCCTACACATTGTGCACA 59.122 45.455 17.42 17.42 36.98 4.57
3354 3406 2.226437 CCTGTTCCTACACATTGTGCAC 59.774 50.000 16.62 10.75 36.98 4.57
3355 3407 2.158682 ACCTGTTCCTACACATTGTGCA 60.159 45.455 16.62 2.93 36.98 4.57
3356 3408 2.504367 ACCTGTTCCTACACATTGTGC 58.496 47.619 16.62 0.09 36.98 4.57
3357 3409 4.894784 ACTACCTGTTCCTACACATTGTG 58.105 43.478 15.18 15.18 39.75 3.33
3358 3410 5.562298 AACTACCTGTTCCTACACATTGT 57.438 39.130 0.00 0.00 32.63 2.71
3359 3411 6.877611 AAAACTACCTGTTCCTACACATTG 57.122 37.500 0.00 0.00 38.03 2.82
3383 3435 5.451354 ACTACCTGTTCCTTGCCTTAAAAA 58.549 37.500 0.00 0.00 0.00 1.94
3384 3436 5.056553 ACTACCTGTTCCTTGCCTTAAAA 57.943 39.130 0.00 0.00 0.00 1.52
3385 3437 4.717279 ACTACCTGTTCCTTGCCTTAAA 57.283 40.909 0.00 0.00 0.00 1.52
3386 3438 4.103469 TCAACTACCTGTTCCTTGCCTTAA 59.897 41.667 0.00 0.00 36.63 1.85
3387 3439 3.649023 TCAACTACCTGTTCCTTGCCTTA 59.351 43.478 0.00 0.00 36.63 2.69
3388 3440 2.441750 TCAACTACCTGTTCCTTGCCTT 59.558 45.455 0.00 0.00 36.63 4.35
3389 3441 2.054799 TCAACTACCTGTTCCTTGCCT 58.945 47.619 0.00 0.00 36.63 4.75
3390 3442 2.152016 GTCAACTACCTGTTCCTTGCC 58.848 52.381 0.00 0.00 36.63 4.52
3391 3443 3.127425 AGTCAACTACCTGTTCCTTGC 57.873 47.619 0.00 0.00 36.63 4.01
3392 3444 6.451064 AAAAAGTCAACTACCTGTTCCTTG 57.549 37.500 0.00 0.00 36.63 3.61
3421 3473 9.869757 ACCACAAATAATAAAGCTTGGTATTTC 57.130 29.630 14.67 0.00 34.30 2.17
3423 3475 9.651913 CAACCACAAATAATAAAGCTTGGTATT 57.348 29.630 0.00 4.12 35.00 1.89
3424 3476 8.257306 CCAACCACAAATAATAAAGCTTGGTAT 58.743 33.333 0.00 0.00 35.00 2.73
3425 3477 7.607250 CCAACCACAAATAATAAAGCTTGGTA 58.393 34.615 0.00 0.00 35.00 3.25
3426 3478 6.463360 CCAACCACAAATAATAAAGCTTGGT 58.537 36.000 0.00 0.00 37.73 3.67
3427 3479 5.351189 GCCAACCACAAATAATAAAGCTTGG 59.649 40.000 0.00 0.00 0.00 3.61
3428 3480 5.351189 GGCCAACCACAAATAATAAAGCTTG 59.649 40.000 0.00 0.00 35.26 4.01
3429 3481 5.487433 GGCCAACCACAAATAATAAAGCTT 58.513 37.500 0.00 0.00 35.26 3.74
3430 3482 4.081142 GGGCCAACCACAAATAATAAAGCT 60.081 41.667 4.39 0.00 39.85 3.74
3431 3483 4.188462 GGGCCAACCACAAATAATAAAGC 58.812 43.478 4.39 0.00 39.85 3.51
3432 3484 4.158764 TCGGGCCAACCACAAATAATAAAG 59.841 41.667 4.39 0.00 40.22 1.85
3433 3485 4.082136 GTCGGGCCAACCACAAATAATAAA 60.082 41.667 4.39 0.00 40.22 1.40
3434 3486 3.444388 GTCGGGCCAACCACAAATAATAA 59.556 43.478 4.39 0.00 40.22 1.40
3435 3487 3.018149 GTCGGGCCAACCACAAATAATA 58.982 45.455 4.39 0.00 40.22 0.98
3436 3488 1.822371 GTCGGGCCAACCACAAATAAT 59.178 47.619 4.39 0.00 40.22 1.28
3437 3489 1.249407 GTCGGGCCAACCACAAATAA 58.751 50.000 4.39 0.00 40.22 1.40
3438 3490 0.609681 GGTCGGGCCAACCACAAATA 60.610 55.000 19.06 0.00 40.22 1.40
3439 3491 1.906333 GGTCGGGCCAACCACAAAT 60.906 57.895 19.06 0.00 40.22 2.32
3440 3492 2.519780 GGTCGGGCCAACCACAAA 60.520 61.111 19.06 0.00 40.22 2.83
3441 3493 3.810188 TGGTCGGGCCAACCACAA 61.810 61.111 21.94 3.45 45.94 3.33
3448 3500 2.271821 CATCATGTGGTCGGGCCA 59.728 61.111 4.39 0.00 46.95 5.36
3449 3501 3.211963 GCATCATGTGGTCGGGCC 61.212 66.667 0.00 0.00 37.90 5.80
3450 3502 3.211963 GGCATCATGTGGTCGGGC 61.212 66.667 0.00 0.00 0.00 6.13
3451 3503 2.516930 GGGCATCATGTGGTCGGG 60.517 66.667 0.00 0.00 0.00 5.14
3452 3504 1.820906 CAGGGCATCATGTGGTCGG 60.821 63.158 0.00 0.00 0.00 4.79
3453 3505 0.179037 ATCAGGGCATCATGTGGTCG 60.179 55.000 0.00 0.00 0.00 4.79
3454 3506 1.142465 AGATCAGGGCATCATGTGGTC 59.858 52.381 0.00 0.00 0.00 4.02
3455 3507 1.219773 AGATCAGGGCATCATGTGGT 58.780 50.000 0.00 0.00 0.00 4.16
3456 3508 3.497103 TTAGATCAGGGCATCATGTGG 57.503 47.619 0.00 0.00 0.00 4.17
3457 3509 4.711399 TCTTTAGATCAGGGCATCATGTG 58.289 43.478 0.00 0.00 0.00 3.21
3458 3510 5.378230 TTCTTTAGATCAGGGCATCATGT 57.622 39.130 0.00 0.00 0.00 3.21
3459 3511 5.121925 CGATTCTTTAGATCAGGGCATCATG 59.878 44.000 0.00 0.00 0.00 3.07
3460 3512 5.243981 CGATTCTTTAGATCAGGGCATCAT 58.756 41.667 0.00 0.00 0.00 2.45
3461 3513 4.635223 CGATTCTTTAGATCAGGGCATCA 58.365 43.478 0.00 0.00 0.00 3.07
3462 3514 3.434984 GCGATTCTTTAGATCAGGGCATC 59.565 47.826 0.00 0.00 0.00 3.91
3463 3515 3.072184 AGCGATTCTTTAGATCAGGGCAT 59.928 43.478 0.00 0.00 0.00 4.40
3464 3516 2.435805 AGCGATTCTTTAGATCAGGGCA 59.564 45.455 0.00 0.00 0.00 5.36
3465 3517 3.118905 AGCGATTCTTTAGATCAGGGC 57.881 47.619 0.00 0.00 0.00 5.19
3466 3518 4.697514 TGAAGCGATTCTTTAGATCAGGG 58.302 43.478 15.31 0.00 34.56 4.45
3467 3519 5.987953 TCATGAAGCGATTCTTTAGATCAGG 59.012 40.000 15.31 0.00 34.56 3.86
3468 3520 6.922407 TCTCATGAAGCGATTCTTTAGATCAG 59.078 38.462 15.31 0.00 34.56 2.90
3469 3521 6.699204 GTCTCATGAAGCGATTCTTTAGATCA 59.301 38.462 15.31 0.00 34.56 2.92
3470 3522 6.699204 TGTCTCATGAAGCGATTCTTTAGATC 59.301 38.462 15.31 9.53 34.56 2.75
3471 3523 6.577103 TGTCTCATGAAGCGATTCTTTAGAT 58.423 36.000 15.31 0.00 34.56 1.98
3472 3524 5.965922 TGTCTCATGAAGCGATTCTTTAGA 58.034 37.500 15.31 11.49 34.56 2.10
3473 3525 6.841443 ATGTCTCATGAAGCGATTCTTTAG 57.159 37.500 15.31 9.32 34.56 1.85
3474 3526 7.716612 TCTATGTCTCATGAAGCGATTCTTTA 58.283 34.615 15.31 0.00 34.56 1.85
3475 3527 6.577103 TCTATGTCTCATGAAGCGATTCTTT 58.423 36.000 15.31 0.00 34.56 2.52
3476 3528 6.154203 TCTATGTCTCATGAAGCGATTCTT 57.846 37.500 15.31 5.38 37.83 2.52
3477 3529 5.781210 TCTATGTCTCATGAAGCGATTCT 57.219 39.130 15.31 0.00 0.00 2.40
3478 3530 8.700722 ATAATCTATGTCTCATGAAGCGATTC 57.299 34.615 6.43 6.43 0.00 2.52
3479 3531 9.499479 AAATAATCTATGTCTCATGAAGCGATT 57.501 29.630 0.00 0.00 0.00 3.34
3480 3532 9.149225 GAAATAATCTATGTCTCATGAAGCGAT 57.851 33.333 0.00 0.00 0.00 4.58
3481 3533 8.143835 TGAAATAATCTATGTCTCATGAAGCGA 58.856 33.333 0.00 0.00 0.00 4.93
3482 3534 8.302965 TGAAATAATCTATGTCTCATGAAGCG 57.697 34.615 0.00 0.00 0.00 4.68
3713 3773 3.798878 TGCAAATTCGAAAATTGTTCGCA 59.201 34.783 21.11 13.66 41.30 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.