Multiple sequence alignment - TraesCS1B01G180200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G180200 chr1B 100.000 4553 0 0 1 4553 326928809 326924257 0.000000e+00 8408.0
1 TraesCS1B01G180200 chr1B 87.842 2854 286 31 700 3513 435360002 435362834 0.000000e+00 3291.0
2 TraesCS1B01G180200 chr1B 91.388 2183 180 8 1311 3489 442621033 442618855 0.000000e+00 2983.0
3 TraesCS1B01G180200 chr1B 90.660 1167 103 6 2326 3489 442551746 442550583 0.000000e+00 1546.0
4 TraesCS1B01G180200 chr1B 92.814 668 22 11 1 648 435359249 435359910 0.000000e+00 944.0
5 TraesCS1B01G180200 chr1B 85.757 674 38 24 1 648 442622107 442621466 0.000000e+00 660.0
6 TraesCS1B01G180200 chr1B 85.531 311 40 5 3679 3985 442550376 442550067 2.040000e-83 320.0
7 TraesCS1B01G180200 chr1B 85.531 311 40 5 3679 3985 442618648 442618339 2.040000e-83 320.0
8 TraesCS1B01G180200 chr1B 81.848 303 40 8 4135 4426 437837117 437836819 1.640000e-59 241.0
9 TraesCS1B01G180200 chr1B 83.260 227 22 10 3613 3835 437860236 437860022 1.290000e-45 195.0
10 TraesCS1B01G180200 chr1B 91.241 137 8 2 693 829 442621843 442621711 2.800000e-42 183.0
11 TraesCS1B01G180200 chr1B 84.264 197 16 7 933 1121 442621240 442621051 1.300000e-40 178.0
12 TraesCS1B01G180200 chr1B 87.117 163 11 4 1151 1311 435808536 435808690 4.680000e-40 176.0
13 TraesCS1B01G180200 chr1B 92.727 110 5 1 1091 1200 435808541 435808647 6.100000e-34 156.0
14 TraesCS1B01G180200 chr1B 90.756 119 4 2 1083 1200 435360470 435360582 7.890000e-33 152.0
15 TraesCS1B01G180200 chr1B 86.885 122 10 3 1083 1203 326927663 326927547 1.030000e-26 132.0
16 TraesCS1B01G180200 chr1B 89.216 102 3 3 1210 1311 435814235 435814328 2.220000e-23 121.0
17 TraesCS1B01G180200 chr1B 92.683 82 4 2 850 930 435926188 435926268 2.880000e-22 117.0
18 TraesCS1B01G180200 chr1B 90.244 82 6 2 850 930 435807926 435808006 6.230000e-19 106.0
19 TraesCS1B01G180200 chr1A 87.878 2879 273 41 691 3513 406581929 406584787 0.000000e+00 3314.0
20 TraesCS1B01G180200 chr1A 87.661 2877 278 32 691 3522 407518809 407515965 0.000000e+00 3275.0
21 TraesCS1B01G180200 chr1A 86.804 2228 262 20 1311 3522 425257928 425255717 0.000000e+00 2457.0
22 TraesCS1B01G180200 chr1A 86.622 2220 261 25 1311 3513 421637974 421640174 0.000000e+00 2422.0
23 TraesCS1B01G180200 chr1A 90.783 1801 158 8 1723 3519 417389158 417387362 0.000000e+00 2399.0
24 TraesCS1B01G180200 chr1A 90.296 608 27 12 69 648 406581315 406581918 0.000000e+00 767.0
25 TraesCS1B01G180200 chr1A 90.296 608 27 12 69 648 407519423 407518820 0.000000e+00 767.0
26 TraesCS1B01G180200 chr1A 89.573 585 35 12 76 648 425259074 425258504 0.000000e+00 719.0
27 TraesCS1B01G180200 chr1A 87.769 605 44 12 69 648 417396869 417396270 0.000000e+00 680.0
28 TraesCS1B01G180200 chr1A 90.577 520 24 10 69 566 421635596 421636112 0.000000e+00 665.0
29 TraesCS1B01G180200 chr1A 89.259 540 23 16 691 1200 421637338 421637872 1.070000e-180 643.0
30 TraesCS1B01G180200 chr1A 84.762 315 42 6 3682 3992 417387182 417386870 1.230000e-80 311.0
31 TraesCS1B01G180200 chr1A 88.166 169 14 4 2015 2179 418997653 418997819 3.590000e-46 196.0
32 TraesCS1B01G180200 chr1A 90.476 147 10 1 683 829 417396649 417396507 1.670000e-44 191.0
33 TraesCS1B01G180200 chr1A 86.391 169 17 3 2015 2179 419015047 419015213 3.620000e-41 180.0
34 TraesCS1B01G180200 chr1A 91.071 112 8 2 1154 1263 407518382 407518271 2.840000e-32 150.0
35 TraesCS1B01G180200 chr1A 84.049 163 11 9 933 1087 425258281 425258126 4.750000e-30 143.0
36 TraesCS1B01G180200 chr1A 88.525 122 7 2 1083 1203 407518327 407518212 1.710000e-29 141.0
37 TraesCS1B01G180200 chr1A 89.286 112 10 2 1151 1260 406582353 406582464 6.140000e-29 139.0
38 TraesCS1B01G180200 chr1A 83.453 139 22 1 4288 4426 419006959 419007096 1.330000e-25 128.0
39 TraesCS1B01G180200 chr1A 83.453 139 22 1 4288 4426 419021257 419021394 1.330000e-25 128.0
40 TraesCS1B01G180200 chr1A 83.962 106 17 0 4321 4426 419022526 419022631 8.060000e-18 102.0
41 TraesCS1B01G180200 chr1A 97.959 49 1 0 1 49 406581269 406581317 8.120000e-13 86.1
42 TraesCS1B01G180200 chr1A 97.959 49 1 0 1 49 407519469 407519421 8.120000e-13 86.1
43 TraesCS1B01G180200 chr1A 95.918 49 2 0 1 49 417396915 417396867 3.780000e-11 80.5
44 TraesCS1B01G180200 chr1D 90.835 2215 191 10 1311 3519 328445991 328443783 0.000000e+00 2955.0
45 TraesCS1B01G180200 chr1D 87.252 2220 249 22 1311 3513 322380989 322383191 0.000000e+00 2501.0
46 TraesCS1B01G180200 chr1D 85.345 2245 276 31 1316 3547 323636496 323638700 0.000000e+00 2274.0
47 TraesCS1B01G180200 chr1D 91.220 672 26 15 1 648 322379671 322380333 0.000000e+00 883.0
48 TraesCS1B01G180200 chr1D 88.364 593 32 17 69 648 328453558 328452990 0.000000e+00 678.0
49 TraesCS1B01G180200 chr1D 89.706 544 22 11 691 1200 322380344 322380887 0.000000e+00 664.0
50 TraesCS1B01G180200 chr1D 87.413 572 57 11 3864 4425 323639043 323639609 1.070000e-180 643.0
51 TraesCS1B01G180200 chr1D 87.013 385 33 10 3612 3992 325503789 325503418 7.040000e-113 418.0
52 TraesCS1B01G180200 chr1D 83.512 467 29 24 96 536 323635186 323635630 4.270000e-105 392.0
53 TraesCS1B01G180200 chr1D 85.849 318 40 5 3679 3992 328443609 328443293 2.630000e-87 333.0
54 TraesCS1B01G180200 chr1D 90.667 150 10 2 680 829 322379947 322380092 3.590000e-46 196.0
55 TraesCS1B01G180200 chr1D 88.623 167 9 5 680 844 323635358 323635516 1.290000e-45 195.0
56 TraesCS1B01G180200 chr1D 84.663 163 11 6 933 1087 328446361 328446205 2.840000e-32 150.0
57 TraesCS1B01G180200 chr1D 87.313 134 12 3 1151 1279 322380773 322380906 1.020000e-31 148.0
58 TraesCS1B01G180200 chr1D 84.685 111 16 1 4316 4426 325493071 325492962 4.820000e-20 110.0
59 TraesCS1B01G180200 chr1D 87.629 97 9 3 4150 4245 325493561 325493467 4.820000e-20 110.0
60 TraesCS1B01G180200 chr1D 92.208 77 5 1 4428 4504 323639647 323639722 1.730000e-19 108.0
61 TraesCS1B01G180200 chr1D 90.244 82 5 3 850 930 323635646 323635725 2.240000e-18 104.0
62 TraesCS1B01G180200 chr1D 95.918 49 2 0 1 49 328453604 328453556 3.780000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G180200 chr1B 326924257 326928809 4552 True 4270.000000 8408 93.442500 1 4553 2 chr1B.!!$R3 4552
1 TraesCS1B01G180200 chr1B 435359249 435362834 3585 False 1462.333333 3291 90.470667 1 3513 3 chr1B.!!$F3 3512
2 TraesCS1B01G180200 chr1B 442550067 442551746 1679 True 933.000000 1546 88.095500 2326 3985 2 chr1B.!!$R4 1659
3 TraesCS1B01G180200 chr1B 442618339 442622107 3768 True 864.800000 2983 87.636200 1 3985 5 chr1B.!!$R5 3984
4 TraesCS1B01G180200 chr1A 417386870 417389158 2288 True 1355.000000 2399 87.772500 1723 3992 2 chr1A.!!$R2 2269
5 TraesCS1B01G180200 chr1A 421635596 421640174 4578 False 1243.333333 2422 88.819333 69 3513 3 chr1A.!!$F6 3444
6 TraesCS1B01G180200 chr1A 425255717 425259074 3357 True 1106.333333 2457 86.808667 76 3522 3 chr1A.!!$R4 3446
7 TraesCS1B01G180200 chr1A 406581269 406584787 3518 False 1076.525000 3314 91.354750 1 3513 4 chr1A.!!$F4 3512
8 TraesCS1B01G180200 chr1A 407515965 407519469 3504 True 883.820000 3275 91.102400 1 3522 5 chr1A.!!$R1 3521
9 TraesCS1B01G180200 chr1A 417396270 417396915 645 True 317.166667 680 91.387667 1 829 3 chr1A.!!$R3 828
10 TraesCS1B01G180200 chr1D 328443293 328446361 3068 True 1146.000000 2955 87.115667 933 3992 3 chr1D.!!$R3 3059
11 TraesCS1B01G180200 chr1D 322379671 322383191 3520 False 878.400000 2501 89.231600 1 3513 5 chr1D.!!$F1 3512
12 TraesCS1B01G180200 chr1D 323635186 323639722 4536 False 619.333333 2274 87.890833 96 4504 6 chr1D.!!$F2 4408
13 TraesCS1B01G180200 chr1D 328452990 328453604 614 True 379.250000 678 92.141000 1 648 2 chr1D.!!$R4 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 1878 0.102120 CCTTTGTGTGCTTTGCCGAA 59.898 50.0 0.0 0.0 0.0 4.30 F
2523 4316 0.038166 ACACTGGGCCGTCAATCAAT 59.962 50.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2631 4424 0.036388 CATCAGCCACGGTAACCTGT 60.036 55.0 0.00 0.0 0.00 4.00 R
3772 5851 0.240678 CCAAACAGCATAGCGTTGCA 59.759 50.0 14.95 0.0 45.23 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 1.592400 CGAGTTGCTGGAGTACGGGA 61.592 60.000 0.00 0.00 0.00 5.14
54 55 0.173708 GAGTTGCTGGAGTACGGGAG 59.826 60.000 0.00 0.00 0.00 4.30
55 56 1.218316 GTTGCTGGAGTACGGGAGG 59.782 63.158 0.00 0.00 0.00 4.30
56 57 1.987855 TTGCTGGAGTACGGGAGGG 60.988 63.158 0.00 0.00 0.00 4.30
80 88 0.618458 AGGCACCGTATGGATTGTGT 59.382 50.000 8.33 0.00 39.21 3.72
107 115 4.143333 GAGGCGCCGGCTACTTCA 62.143 66.667 26.68 0.00 38.98 3.02
136 144 4.657824 ACGAAGGCGACGGTGTGG 62.658 66.667 10.48 0.00 41.64 4.17
155 197 1.607509 GGCTCGTCCAGATCATCCATG 60.608 57.143 0.00 0.00 34.01 3.66
156 198 1.607509 GCTCGTCCAGATCATCCATGG 60.608 57.143 4.97 4.97 35.30 3.66
213 261 8.776376 TTTTCCAAATCCTAATGCTTTGATTC 57.224 30.769 0.00 0.00 32.83 2.52
255 311 7.319646 TCAAAAAGCGCTCATTATGGTTTAAT 58.680 30.769 12.06 0.00 33.41 1.40
566 1792 0.933047 GCGGTCGAACCTTTGTTTGC 60.933 55.000 0.00 0.00 35.66 3.68
573 1799 2.099098 CGAACCTTTGTTTGCTTGGAGT 59.901 45.455 0.00 0.00 33.97 3.85
648 1875 1.595109 GCCCTTTGTGTGCTTTGCC 60.595 57.895 0.00 0.00 0.00 4.52
650 1877 1.732917 CCTTTGTGTGCTTTGCCGA 59.267 52.632 0.00 0.00 0.00 5.54
651 1878 0.102120 CCTTTGTGTGCTTTGCCGAA 59.898 50.000 0.00 0.00 0.00 4.30
652 1879 1.269726 CCTTTGTGTGCTTTGCCGAAT 60.270 47.619 0.00 0.00 0.00 3.34
655 1882 0.537143 TGTGTGCTTTGCCGAATCCT 60.537 50.000 0.00 0.00 0.00 3.24
656 1883 1.271108 TGTGTGCTTTGCCGAATCCTA 60.271 47.619 0.00 0.00 0.00 2.94
657 1884 1.810151 GTGTGCTTTGCCGAATCCTAA 59.190 47.619 0.00 0.00 0.00 2.69
658 1885 2.423538 GTGTGCTTTGCCGAATCCTAAT 59.576 45.455 0.00 0.00 0.00 1.73
659 1886 2.682856 TGTGCTTTGCCGAATCCTAATC 59.317 45.455 0.00 0.00 0.00 1.75
660 1887 2.033424 GTGCTTTGCCGAATCCTAATCC 59.967 50.000 0.00 0.00 0.00 3.01
662 1889 2.291741 GCTTTGCCGAATCCTAATCCTG 59.708 50.000 0.00 0.00 0.00 3.86
663 1890 3.808728 CTTTGCCGAATCCTAATCCTGA 58.191 45.455 0.00 0.00 0.00 3.86
664 1891 4.392940 CTTTGCCGAATCCTAATCCTGAT 58.607 43.478 0.00 0.00 0.00 2.90
665 1892 3.407424 TGCCGAATCCTAATCCTGATG 57.593 47.619 0.00 0.00 0.00 3.07
666 1893 2.079925 GCCGAATCCTAATCCTGATGC 58.920 52.381 0.00 0.00 0.00 3.91
667 1894 2.289945 GCCGAATCCTAATCCTGATGCT 60.290 50.000 0.00 0.00 0.00 3.79
668 1895 3.808618 GCCGAATCCTAATCCTGATGCTT 60.809 47.826 0.00 0.00 0.00 3.91
670 1897 4.214971 CCGAATCCTAATCCTGATGCTTTG 59.785 45.833 0.00 0.00 0.00 2.77
671 1898 5.059161 CGAATCCTAATCCTGATGCTTTGA 58.941 41.667 0.00 0.00 0.00 2.69
672 1899 5.704515 CGAATCCTAATCCTGATGCTTTGAT 59.295 40.000 0.00 0.00 0.00 2.57
673 1900 6.206243 CGAATCCTAATCCTGATGCTTTGATT 59.794 38.462 0.00 0.00 0.00 2.57
674 1901 7.255381 CGAATCCTAATCCTGATGCTTTGATTT 60.255 37.037 0.00 0.00 0.00 2.17
675 1902 7.909485 ATCCTAATCCTGATGCTTTGATTTT 57.091 32.000 0.00 0.00 0.00 1.82
760 2060 1.511464 CACTCGACACGTAGCGTCC 60.511 63.158 8.74 0.00 38.32 4.79
872 2177 2.126463 TTTCTCTCGACCAGCGCG 60.126 61.111 0.00 0.00 40.61 6.86
930 2235 0.890542 TCAGGGCATCACTTGTGTGC 60.891 55.000 14.98 14.98 43.49 4.57
934 2239 1.582968 GCATCACTTGTGTGCCAGG 59.417 57.895 13.38 0.00 43.49 4.45
935 2240 0.890542 GCATCACTTGTGTGCCAGGA 60.891 55.000 13.38 0.00 43.49 3.86
1001 2326 1.153369 ATCTAGGCGTGCGTGCAAT 60.153 52.632 0.00 0.00 36.28 3.56
1033 2359 0.885196 GCATTTAACGTTGAGGCCCA 59.115 50.000 11.99 0.00 0.00 5.36
1087 2413 5.221322 CCTTTCTTTCTCTCCCAAAACCAAG 60.221 44.000 0.00 0.00 0.00 3.61
1088 2414 4.788925 TCTTTCTCTCCCAAAACCAAGA 57.211 40.909 0.00 0.00 0.00 3.02
1107 2448 5.476254 CCAAGAGAAGAGGAAGAAGCATTTT 59.524 40.000 0.00 0.00 0.00 1.82
1126 2467 0.898326 TCTGCTCTCCACCGTGCTTA 60.898 55.000 0.00 0.00 0.00 3.09
1127 2468 0.737715 CTGCTCTCCACCGTGCTTAC 60.738 60.000 0.00 0.00 0.00 2.34
1128 2469 1.292223 GCTCTCCACCGTGCTTACA 59.708 57.895 0.00 0.00 0.00 2.41
1204 2545 1.040339 GTGCTTCCACCACCACCAAA 61.040 55.000 0.00 0.00 35.92 3.28
1205 2546 0.754957 TGCTTCCACCACCACCAAAG 60.755 55.000 0.00 0.00 0.00 2.77
1207 2548 1.609208 CTTCCACCACCACCAAAGAG 58.391 55.000 0.00 0.00 0.00 2.85
1291 2882 1.944709 GTCCTCTCTACCTCTCGCTTC 59.055 57.143 0.00 0.00 0.00 3.86
1430 3208 1.376466 GTGCAGGCCTCTCTCCAAA 59.624 57.895 0.00 0.00 0.00 3.28
1435 3213 1.839994 CAGGCCTCTCTCCAAACCATA 59.160 52.381 0.00 0.00 0.00 2.74
1443 3221 5.221803 CCTCTCTCCAAACCATAGCACATAT 60.222 44.000 0.00 0.00 0.00 1.78
1527 3305 1.302832 CTTCCTGCCAACGCCTCTT 60.303 57.895 0.00 0.00 0.00 2.85
1567 3345 2.047061 GCCTCATCCATACCTACACCA 58.953 52.381 0.00 0.00 0.00 4.17
1569 3347 3.744530 GCCTCATCCATACCTACACCAAC 60.745 52.174 0.00 0.00 0.00 3.77
1578 3356 1.069668 ACCTACACCAACGTCTTCACC 59.930 52.381 0.00 0.00 0.00 4.02
1589 3367 4.038080 CTTCACCGGGTTTGCCGC 62.038 66.667 6.32 0.00 34.97 6.53
1624 3402 1.290324 GAGCTTGCTCTCGTGTCCA 59.710 57.895 14.65 0.00 0.00 4.02
1630 3408 1.216710 GCTCTCGTGTCCAAGAGGG 59.783 63.158 9.78 7.87 39.86 4.30
1631 3409 1.216710 CTCTCGTGTCCAAGAGGGC 59.783 63.158 9.78 0.00 41.04 5.19
1654 3432 2.415608 TTTGTGCGGGCGTTTCCAA 61.416 52.632 0.00 0.00 36.21 3.53
1659 3437 2.642700 CGGGCGTTTCCAAACCAG 59.357 61.111 0.00 0.00 35.51 4.00
1686 3464 2.113139 CCCACCACCACTCACACC 59.887 66.667 0.00 0.00 0.00 4.16
1689 3467 1.225983 CACCACCACTCACACCCAA 59.774 57.895 0.00 0.00 0.00 4.12
1692 3470 0.182537 CCACCACTCACACCCAAGAA 59.817 55.000 0.00 0.00 0.00 2.52
1720 3498 2.285368 TCAAGAGGGATGCCGGGT 60.285 61.111 2.18 0.00 0.00 5.28
1728 3506 2.668632 GATGCCGGGTTGTGGAGA 59.331 61.111 2.18 0.00 0.00 3.71
1740 3518 3.391049 GTTGTGGAGAGACACCAACTAC 58.609 50.000 0.00 0.00 40.62 2.73
1746 3524 0.456312 GAGACACCAACTACGGCGAG 60.456 60.000 16.62 9.48 0.00 5.03
1755 3533 1.102222 ACTACGGCGAGGGAGTCATC 61.102 60.000 16.62 0.00 0.00 2.92
1767 3545 2.431057 GGGAGTCATCATCGGTGTAGTT 59.569 50.000 0.00 0.00 0.00 2.24
2154 3938 3.465403 CTCTCCCTCGCCCCTGTG 61.465 72.222 0.00 0.00 0.00 3.66
2173 3957 5.484173 TGTGTTTGATGTTGAGTTCAGTC 57.516 39.130 0.00 0.00 0.00 3.51
2174 3958 4.033932 TGTGTTTGATGTTGAGTTCAGTCG 59.966 41.667 0.00 0.00 0.00 4.18
2186 3970 3.054503 CAGTCGAGACCCGGTCGT 61.055 66.667 12.04 0.00 37.67 4.34
2241 4025 4.353437 GTTGTGGCTGCAGCTGGC 62.353 66.667 35.82 25.02 45.13 4.85
2258 4042 1.349688 TGGCAATAACGGACCAGAGTT 59.650 47.619 0.00 0.00 0.00 3.01
2259 4043 2.224670 TGGCAATAACGGACCAGAGTTT 60.225 45.455 0.00 0.00 0.00 2.66
2380 4164 4.766891 TCAATGGAGAAGCTTTTAACCAGG 59.233 41.667 0.00 5.58 0.00 4.45
2514 4307 0.452987 CAATGAATGACACTGGGCCG 59.547 55.000 0.00 0.00 0.00 6.13
2523 4316 0.038166 ACACTGGGCCGTCAATCAAT 59.962 50.000 0.00 0.00 0.00 2.57
2526 4319 2.752354 CACTGGGCCGTCAATCAATAAA 59.248 45.455 0.00 0.00 0.00 1.40
2627 4420 2.388735 TCTCGAGGACTATGGCAATGT 58.611 47.619 13.56 0.00 0.00 2.71
2631 4424 3.449377 TCGAGGACTATGGCAATGTTGTA 59.551 43.478 0.00 0.00 0.00 2.41
2637 4433 4.662278 ACTATGGCAATGTTGTACAGGTT 58.338 39.130 0.00 0.00 0.00 3.50
2731 4527 1.210478 AGAACACTGTGCTTGGTGTCT 59.790 47.619 7.90 0.00 44.54 3.41
2748 4544 1.625818 GTCTGTCCATCTCCCACTGTT 59.374 52.381 0.00 0.00 0.00 3.16
2796 4592 4.329545 TTCAGCCCCGGTGTGCTC 62.330 66.667 7.35 0.00 35.12 4.26
2886 4682 3.037549 TGGGCCATTCCACATTAAATCC 58.962 45.455 0.00 0.00 36.21 3.01
2928 4724 3.279116 GTCAGTGGCGTTGCTGCA 61.279 61.111 0.00 0.00 36.28 4.41
2932 4728 1.227823 AGTGGCGTTGCTGCACTTA 60.228 52.632 0.00 0.00 36.28 2.24
3090 4886 3.355378 TGGCCATGTCAATCCTACAAAG 58.645 45.455 0.00 0.00 0.00 2.77
3123 4919 1.271926 GGCCTTGTGTATGACCTTGGT 60.272 52.381 0.00 0.00 0.00 3.67
3145 4941 2.717580 TACTGAATATGCCGGCTACG 57.282 50.000 29.70 11.09 40.55 3.51
3178 4974 1.619654 TGGTGATCAAGGTTTGGCAG 58.380 50.000 0.00 0.00 0.00 4.85
3272 5068 2.422597 CATAACGGTGCCACTCAAGAA 58.577 47.619 0.00 0.00 0.00 2.52
3275 5071 1.757682 ACGGTGCCACTCAAGAAAAA 58.242 45.000 0.00 0.00 0.00 1.94
3317 5113 0.539438 GTGACAAATGTGGGGCCAGA 60.539 55.000 4.39 0.00 0.00 3.86
3417 5213 4.593956 CCAAGGCTGGAGAAAAGATAACT 58.406 43.478 0.00 0.00 46.92 2.24
3449 5245 2.116533 TGAGCAGGCATCGCAATGG 61.117 57.895 0.00 0.00 33.19 3.16
3463 5259 1.203287 GCAATGGCAGGGAAAAGTCTC 59.797 52.381 0.00 0.00 40.72 3.36
3475 5271 3.838903 GGAAAAGTCTCTGGAGGGAAGTA 59.161 47.826 0.00 0.00 0.00 2.24
3516 5312 1.999735 CATGTCGTGCGTAGTCCAATT 59.000 47.619 0.00 0.00 0.00 2.32
3522 5318 2.451693 GCGTAGTCCAATTGTCGCA 58.548 52.632 17.34 0.00 42.54 5.10
3525 5321 1.390123 CGTAGTCCAATTGTCGCAGTG 59.610 52.381 4.43 0.00 0.00 3.66
3527 5323 1.210155 GTCCAATTGTCGCAGTGGC 59.790 57.895 4.43 0.00 0.00 5.01
3530 5326 3.055719 AATTGTCGCAGTGGCCGG 61.056 61.111 0.00 0.00 36.38 6.13
3536 5332 3.760035 CGCAGTGGCCGGTCTAGT 61.760 66.667 7.97 0.00 36.38 2.57
3537 5333 2.184579 GCAGTGGCCGGTCTAGTC 59.815 66.667 7.97 0.00 0.00 2.59
3547 5343 0.736053 CGGTCTAGTCTCTCCACTGC 59.264 60.000 0.00 0.00 0.00 4.40
3553 5349 4.642885 GTCTAGTCTCTCCACTGCTGTAAT 59.357 45.833 0.00 0.00 0.00 1.89
3554 5350 5.126384 GTCTAGTCTCTCCACTGCTGTAATT 59.874 44.000 0.00 0.00 0.00 1.40
3555 5351 4.899352 AGTCTCTCCACTGCTGTAATTT 57.101 40.909 0.00 0.00 0.00 1.82
3566 5362 6.037610 CCACTGCTGTAATTTGGAAGAGTATC 59.962 42.308 0.00 0.00 0.00 2.24
3567 5363 6.595326 CACTGCTGTAATTTGGAAGAGTATCA 59.405 38.462 0.00 0.00 37.82 2.15
3568 5364 6.595716 ACTGCTGTAATTTGGAAGAGTATCAC 59.404 38.462 0.00 0.00 37.82 3.06
3569 5365 6.472016 TGCTGTAATTTGGAAGAGTATCACA 58.528 36.000 0.00 0.00 37.82 3.58
3570 5366 7.112122 TGCTGTAATTTGGAAGAGTATCACAT 58.888 34.615 0.00 0.00 37.82 3.21
3579 5375 8.410673 TTGGAAGAGTATCACATATCTACTCC 57.589 38.462 5.56 0.00 41.38 3.85
3580 5376 7.526918 TGGAAGAGTATCACATATCTACTCCA 58.473 38.462 5.56 0.00 41.38 3.86
3583 5379 8.588290 AAGAGTATCACATATCTACTCCATCC 57.412 38.462 5.56 0.00 41.38 3.51
3584 5380 7.938686 AGAGTATCACATATCTACTCCATCCT 58.061 38.462 5.56 0.00 41.38 3.24
3585 5381 8.397957 AGAGTATCACATATCTACTCCATCCTT 58.602 37.037 5.56 0.00 41.38 3.36
3590 5615 8.783660 TCACATATCTACTCCATCCTTAAGTT 57.216 34.615 0.97 0.00 0.00 2.66
3633 5667 9.059023 ACTCTCTTAATTAGTAGGGTTTCCATT 57.941 33.333 0.00 0.00 34.83 3.16
3649 5683 9.719355 GGGTTTCCATTGTCTGTAAAATAATTT 57.281 29.630 0.00 0.00 0.00 1.82
3673 5707 5.902613 AGTTTGGACATGTAACATCCATG 57.097 39.130 11.53 0.00 42.09 3.66
3674 5708 4.158394 AGTTTGGACATGTAACATCCATGC 59.842 41.667 11.53 5.22 42.09 4.06
3675 5709 3.362870 TGGACATGTAACATCCATGCA 57.637 42.857 0.00 0.00 42.74 3.96
3678 5712 3.884693 GGACATGTAACATCCATGCATCA 59.115 43.478 0.00 0.00 42.74 3.07
3679 5713 4.521639 GGACATGTAACATCCATGCATCAT 59.478 41.667 0.00 0.00 42.74 2.45
3680 5714 5.335426 GGACATGTAACATCCATGCATCATC 60.335 44.000 0.00 0.00 42.74 2.92
3682 5716 4.167652 TGTAACATCCATGCATCATCCA 57.832 40.909 0.00 0.00 0.00 3.41
3683 5717 4.732065 TGTAACATCCATGCATCATCCAT 58.268 39.130 0.00 0.00 0.00 3.41
3684 5718 5.141910 TGTAACATCCATGCATCATCCATT 58.858 37.500 0.00 0.00 0.00 3.16
3685 5719 4.866508 AACATCCATGCATCATCCATTC 57.133 40.909 0.00 0.00 0.00 2.67
3686 5720 3.162666 ACATCCATGCATCATCCATTCC 58.837 45.455 0.00 0.00 0.00 3.01
3687 5721 3.181422 ACATCCATGCATCATCCATTCCT 60.181 43.478 0.00 0.00 0.00 3.36
3688 5722 4.043686 ACATCCATGCATCATCCATTCCTA 59.956 41.667 0.00 0.00 0.00 2.94
3690 5724 6.069264 ACATCCATGCATCATCCATTCCTATA 60.069 38.462 0.00 0.00 0.00 1.31
3691 5725 6.586015 TCCATGCATCATCCATTCCTATAT 57.414 37.500 0.00 0.00 0.00 0.86
3692 5726 7.695074 TCCATGCATCATCCATTCCTATATA 57.305 36.000 0.00 0.00 0.00 0.86
3693 5727 8.104838 TCCATGCATCATCCATTCCTATATAA 57.895 34.615 0.00 0.00 0.00 0.98
3694 5728 7.994911 TCCATGCATCATCCATTCCTATATAAC 59.005 37.037 0.00 0.00 0.00 1.89
3696 5730 6.662755 TGCATCATCCATTCCTATATAACCC 58.337 40.000 0.00 0.00 0.00 4.11
3697 5731 6.448061 TGCATCATCCATTCCTATATAACCCT 59.552 38.462 0.00 0.00 0.00 4.34
3698 5732 6.769822 GCATCATCCATTCCTATATAACCCTG 59.230 42.308 0.00 0.00 0.00 4.45
3751 5830 8.972458 TCAGATCATTTCATTTATCGGGTTTA 57.028 30.769 0.00 0.00 0.00 2.01
3761 5840 8.657074 TCATTTATCGGGTTTACTTACATCTG 57.343 34.615 0.00 0.00 0.00 2.90
3762 5841 8.262227 TCATTTATCGGGTTTACTTACATCTGT 58.738 33.333 0.00 0.00 0.00 3.41
3784 5863 1.135431 TGGAAACATGCAACGCTATGC 60.135 47.619 0.00 3.83 40.61 3.14
3800 5879 4.260375 CGCTATGCTGTTTGGATACTGAAC 60.260 45.833 0.00 0.00 35.02 3.18
3805 5884 3.189287 GCTGTTTGGATACTGAACTGTGG 59.811 47.826 0.00 0.00 35.94 4.17
3810 5889 3.750371 TGGATACTGAACTGTGGGTTTG 58.250 45.455 0.00 0.00 36.24 2.93
3811 5890 3.137544 TGGATACTGAACTGTGGGTTTGT 59.862 43.478 0.00 0.00 36.24 2.83
3814 5893 5.180680 GGATACTGAACTGTGGGTTTGTAAC 59.819 44.000 0.00 0.00 38.41 2.50
3832 5913 7.534085 TTGTAACCTATTGTCTTATGCTTCG 57.466 36.000 0.00 0.00 0.00 3.79
3844 5925 7.915508 TGTCTTATGCTTCGTATTATTTGTGG 58.084 34.615 0.00 0.00 0.00 4.17
3850 5931 7.015226 TGCTTCGTATTATTTGTGGATTCAG 57.985 36.000 0.00 0.00 0.00 3.02
3852 5933 6.371809 TTCGTATTATTTGTGGATTCAGCC 57.628 37.500 0.00 0.00 0.00 4.85
3914 5998 5.880332 GGATGTGCCTAACTAAAATGACTGA 59.120 40.000 0.00 0.00 0.00 3.41
3963 6047 4.037923 TCTGGAAGGTTTTGAGATTTGTGC 59.962 41.667 0.00 0.00 0.00 4.57
3993 6077 2.648059 GCCCATATGCTCTGAAGTTGT 58.352 47.619 0.00 0.00 0.00 3.32
4026 6110 2.436646 GTGGCATCCCAGTCCACG 60.437 66.667 0.00 0.00 43.18 4.94
4027 6111 3.716195 TGGCATCCCAGTCCACGG 61.716 66.667 0.00 0.00 35.79 4.94
4030 6114 2.591753 CATCCCAGTCCACGGCAT 59.408 61.111 0.00 0.00 0.00 4.40
4047 6131 2.097825 GCATGAAACAAGGGATGAGCT 58.902 47.619 0.00 0.00 0.00 4.09
4054 6138 2.636830 ACAAGGGATGAGCTGAATTCG 58.363 47.619 0.00 0.00 0.00 3.34
4070 6154 2.335316 TTCGTTGCCTTGTAACAGGT 57.665 45.000 0.00 0.00 36.15 4.00
4076 6161 3.290948 TGCCTTGTAACAGGTTCAGTT 57.709 42.857 0.00 0.00 36.15 3.16
4077 6162 2.948979 TGCCTTGTAACAGGTTCAGTTG 59.051 45.455 0.00 0.00 36.15 3.16
4089 6174 1.268079 GTTCAGTTGCTTGCCTTCTCC 59.732 52.381 0.00 0.00 0.00 3.71
4090 6175 0.767375 TCAGTTGCTTGCCTTCTCCT 59.233 50.000 0.00 0.00 0.00 3.69
4091 6176 0.879765 CAGTTGCTTGCCTTCTCCTG 59.120 55.000 0.00 0.00 0.00 3.86
4105 6190 5.760743 GCCTTCTCCTGAACTATTTGTATCC 59.239 44.000 0.00 0.00 0.00 2.59
4113 6198 6.599244 CCTGAACTATTTGTATCCTTTGCTCA 59.401 38.462 0.00 0.00 0.00 4.26
4115 6200 7.394016 TGAACTATTTGTATCCTTTGCTCAGA 58.606 34.615 0.00 0.00 0.00 3.27
4133 6218 4.067192 TCAGATTCCATGGTTATGCGATG 58.933 43.478 12.58 1.85 32.79 3.84
4134 6219 4.067192 CAGATTCCATGGTTATGCGATGA 58.933 43.478 12.58 0.00 35.64 2.92
4160 6245 8.134202 TGATTGTTCTCTCCTTTCACTATGTA 57.866 34.615 0.00 0.00 0.00 2.29
4174 6259 6.724893 TCACTATGTATTTGTAGCTAGGCA 57.275 37.500 0.00 0.00 0.00 4.75
4190 6275 0.034670 GGCAACAGGAGGAGCTGAAT 60.035 55.000 0.00 0.00 0.00 2.57
4191 6276 1.615384 GGCAACAGGAGGAGCTGAATT 60.615 52.381 0.00 0.00 0.00 2.17
4194 6279 3.008330 CAACAGGAGGAGCTGAATTCTG 58.992 50.000 7.05 7.51 0.00 3.02
4199 6284 4.161189 CAGGAGGAGCTGAATTCTGAAGTA 59.839 45.833 15.79 0.00 0.00 2.24
4200 6285 4.780021 AGGAGGAGCTGAATTCTGAAGTAA 59.220 41.667 15.79 0.00 0.00 2.24
4202 6287 5.526846 GGAGGAGCTGAATTCTGAAGTAATG 59.473 44.000 15.79 0.00 0.00 1.90
4207 6292 7.752686 GGAGCTGAATTCTGAAGTAATGTTTTC 59.247 37.037 15.79 0.00 0.00 2.29
4242 6327 4.717877 TGATCAATGACTGTTGTTGACCT 58.282 39.130 9.86 0.00 34.98 3.85
4255 6340 0.880278 TTGACCTCTGTTGCGAGTGC 60.880 55.000 0.00 0.00 43.20 4.40
4267 6352 1.278238 GCGAGTGCACACCTATACAC 58.722 55.000 21.04 0.00 42.15 2.90
4271 6356 3.318275 CGAGTGCACACCTATACACCTAT 59.682 47.826 21.04 0.00 33.46 2.57
4363 6451 5.371526 CCATGCCAATCTATAGTGTTCACT 58.628 41.667 10.33 10.33 0.00 3.41
4370 6458 7.492524 CCAATCTATAGTGTTCACTAGCTTCA 58.507 38.462 16.08 0.00 0.00 3.02
4381 6469 5.126396 TCACTAGCTTCATGTCCATATCG 57.874 43.478 0.00 0.00 0.00 2.92
4383 6471 1.788258 AGCTTCATGTCCATATCGCG 58.212 50.000 0.00 0.00 0.00 5.87
4384 6472 1.069204 AGCTTCATGTCCATATCGCGT 59.931 47.619 5.77 0.00 0.00 6.01
4393 6482 2.987149 GTCCATATCGCGTGTTGGATAG 59.013 50.000 22.51 2.69 40.22 2.08
4395 6484 3.057526 TCCATATCGCGTGTTGGATAGAG 60.058 47.826 18.11 2.05 33.40 2.43
4412 6501 7.459234 TGGATAGAGAGTCGGAATGAATACTA 58.541 38.462 0.00 0.00 0.00 1.82
4425 6514 9.698309 CGGAATGAATACTATCTTGACATACTT 57.302 33.333 0.00 0.00 0.00 2.24
4440 6564 2.408271 TACTTCTGAGCAATGCCCTG 57.592 50.000 0.00 0.00 0.00 4.45
4446 6570 0.332293 TGAGCAATGCCCTGGAATGA 59.668 50.000 0.00 0.00 0.00 2.57
4456 6580 2.941415 GCCCTGGAATGACACCTAACTG 60.941 54.545 0.00 0.00 0.00 3.16
4464 6588 3.981071 TGACACCTAACTGAGATTGGG 57.019 47.619 0.00 0.00 36.33 4.12
4466 6590 1.985159 ACACCTAACTGAGATTGGGCA 59.015 47.619 0.00 0.00 33.60 5.36
4495 6619 9.918630 AAAAGATCTTTGAATTAGTGGTGATTG 57.081 29.630 21.15 0.00 32.36 2.67
4504 6628 6.013725 TGAATTAGTGGTGATTGTGTCTACCT 60.014 38.462 0.00 0.00 32.52 3.08
4505 6629 5.818678 TTAGTGGTGATTGTGTCTACCTT 57.181 39.130 0.00 0.00 32.52 3.50
4506 6630 4.008074 AGTGGTGATTGTGTCTACCTTG 57.992 45.455 0.00 0.00 32.52 3.61
4507 6631 3.074412 GTGGTGATTGTGTCTACCTTGG 58.926 50.000 0.00 0.00 32.52 3.61
4508 6632 2.708861 TGGTGATTGTGTCTACCTTGGT 59.291 45.455 0.00 0.00 32.52 3.67
4509 6633 3.074412 GGTGATTGTGTCTACCTTGGTG 58.926 50.000 2.03 0.00 0.00 4.17
4510 6634 3.496160 GGTGATTGTGTCTACCTTGGTGT 60.496 47.826 2.03 0.00 0.00 4.16
4511 6635 4.262721 GGTGATTGTGTCTACCTTGGTGTA 60.263 45.833 2.03 0.00 0.00 2.90
4512 6636 4.929808 GTGATTGTGTCTACCTTGGTGTAG 59.070 45.833 2.03 0.00 39.67 2.74
4513 6637 3.396260 TTGTGTCTACCTTGGTGTAGC 57.604 47.619 2.03 0.00 38.46 3.58
4514 6638 2.321719 TGTGTCTACCTTGGTGTAGCA 58.678 47.619 2.03 0.00 38.46 3.49
4515 6639 2.903784 TGTGTCTACCTTGGTGTAGCAT 59.096 45.455 2.03 0.00 38.46 3.79
4516 6640 3.262420 GTGTCTACCTTGGTGTAGCATG 58.738 50.000 2.03 0.00 38.46 4.06
4517 6641 2.280628 GTCTACCTTGGTGTAGCATGC 58.719 52.381 10.51 10.51 38.46 4.06
4518 6642 2.093447 GTCTACCTTGGTGTAGCATGCT 60.093 50.000 25.99 25.99 38.46 3.79
4519 6643 2.093500 TCTACCTTGGTGTAGCATGCTG 60.093 50.000 30.42 12.97 38.46 4.41
4520 6644 0.962356 ACCTTGGTGTAGCATGCTGC 60.962 55.000 30.42 28.52 45.46 5.25
4521 6645 1.660560 CCTTGGTGTAGCATGCTGCC 61.661 60.000 30.42 25.85 46.52 4.85
4522 6646 0.961857 CTTGGTGTAGCATGCTGCCA 60.962 55.000 30.42 27.87 46.52 4.92
4523 6647 0.961857 TTGGTGTAGCATGCTGCCAG 60.962 55.000 30.42 0.00 46.52 4.85
4524 6648 2.768492 GGTGTAGCATGCTGCCAGC 61.768 63.158 30.42 27.46 46.52 4.85
4525 6649 2.820922 TGTAGCATGCTGCCAGCG 60.821 61.111 30.42 0.00 46.52 5.18
4526 6650 2.512286 GTAGCATGCTGCCAGCGA 60.512 61.111 30.42 5.06 46.52 4.93
4527 6651 2.108514 GTAGCATGCTGCCAGCGAA 61.109 57.895 30.42 4.21 46.52 4.70
4528 6652 1.377072 TAGCATGCTGCCAGCGAAA 60.377 52.632 30.42 3.38 46.52 3.46
4529 6653 1.371337 TAGCATGCTGCCAGCGAAAG 61.371 55.000 30.42 2.72 46.52 2.62
4530 6654 2.488355 CATGCTGCCAGCGAAAGG 59.512 61.111 12.80 0.00 46.26 3.11
4531 6655 2.034687 ATGCTGCCAGCGAAAGGT 59.965 55.556 12.80 0.00 46.26 3.50
4532 6656 1.604593 ATGCTGCCAGCGAAAGGTT 60.605 52.632 12.80 0.00 46.26 3.50
4533 6657 1.870055 ATGCTGCCAGCGAAAGGTTG 61.870 55.000 12.80 0.00 46.26 3.77
4534 6658 2.555547 GCTGCCAGCGAAAGGTTGT 61.556 57.895 0.00 0.00 41.81 3.32
4535 6659 1.283793 CTGCCAGCGAAAGGTTGTG 59.716 57.895 0.00 0.00 41.81 3.33
4536 6660 1.153066 TGCCAGCGAAAGGTTGTGA 60.153 52.632 0.00 0.00 41.81 3.58
4537 6661 1.165907 TGCCAGCGAAAGGTTGTGAG 61.166 55.000 0.00 0.00 41.81 3.51
4538 6662 1.166531 GCCAGCGAAAGGTTGTGAGT 61.167 55.000 0.00 0.00 41.81 3.41
4539 6663 1.308998 CCAGCGAAAGGTTGTGAGTT 58.691 50.000 0.00 0.00 41.81 3.01
4540 6664 1.002468 CCAGCGAAAGGTTGTGAGTTG 60.002 52.381 0.00 0.00 41.81 3.16
4541 6665 1.670811 CAGCGAAAGGTTGTGAGTTGT 59.329 47.619 0.00 0.00 41.81 3.32
4542 6666 2.097466 CAGCGAAAGGTTGTGAGTTGTT 59.903 45.455 0.00 0.00 41.81 2.83
4543 6667 3.311322 CAGCGAAAGGTTGTGAGTTGTTA 59.689 43.478 0.00 0.00 41.81 2.41
4544 6668 3.311596 AGCGAAAGGTTGTGAGTTGTTAC 59.688 43.478 0.00 0.00 40.01 2.50
4545 6669 3.547413 GCGAAAGGTTGTGAGTTGTTACC 60.547 47.826 0.00 0.00 0.00 2.85
4546 6670 3.302870 CGAAAGGTTGTGAGTTGTTACCG 60.303 47.826 0.00 0.00 34.09 4.02
4547 6671 2.994186 AGGTTGTGAGTTGTTACCGT 57.006 45.000 0.00 0.00 34.09 4.83
4548 6672 4.405116 AAGGTTGTGAGTTGTTACCGTA 57.595 40.909 0.00 0.00 34.09 4.02
4549 6673 4.612264 AGGTTGTGAGTTGTTACCGTAT 57.388 40.909 0.00 0.00 34.09 3.06
4550 6674 4.964593 AGGTTGTGAGTTGTTACCGTATT 58.035 39.130 0.00 0.00 34.09 1.89
4551 6675 4.992951 AGGTTGTGAGTTGTTACCGTATTC 59.007 41.667 0.00 0.00 34.09 1.75
4552 6676 4.992951 GGTTGTGAGTTGTTACCGTATTCT 59.007 41.667 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 3.023045 ATACGGTGCCTCCCTCCCT 62.023 63.158 0.00 0.00 0.00 4.20
54 55 2.446036 ATACGGTGCCTCCCTCCC 60.446 66.667 0.00 0.00 0.00 4.30
55 56 2.808206 CCATACGGTGCCTCCCTCC 61.808 68.421 0.00 0.00 0.00 4.30
56 57 1.122019 ATCCATACGGTGCCTCCCTC 61.122 60.000 0.00 0.00 0.00 4.30
131 139 0.176680 ATGATCTGGACGAGCCACAC 59.823 55.000 0.00 0.00 43.33 3.82
136 144 1.607509 CCATGGATGATCTGGACGAGC 60.608 57.143 5.56 0.00 31.38 5.03
255 311 4.448210 GGGACAAGATGTTTATAGCGGAA 58.552 43.478 0.00 0.00 0.00 4.30
385 450 7.489574 CATCTATGGAAAAAGAGGAAGCTAC 57.510 40.000 0.00 0.00 0.00 3.58
573 1799 1.293498 GCGCTGGTGGAGAGAAAGA 59.707 57.895 0.00 0.00 0.00 2.52
636 1863 0.537143 AGGATTCGGCAAAGCACACA 60.537 50.000 0.00 0.00 0.00 3.72
648 1875 5.059161 TCAAAGCATCAGGATTAGGATTCG 58.941 41.667 0.00 0.00 0.00 3.34
650 1877 7.909485 AAATCAAAGCATCAGGATTAGGATT 57.091 32.000 0.00 0.00 33.27 3.01
651 1878 7.909485 AAAATCAAAGCATCAGGATTAGGAT 57.091 32.000 0.00 0.00 30.29 3.24
652 1879 7.722949 AAAAATCAAAGCATCAGGATTAGGA 57.277 32.000 0.00 0.00 30.29 2.94
673 1900 1.253100 GGCGGGACAAGATGGAAAAA 58.747 50.000 0.00 0.00 0.00 1.94
674 1901 0.610785 GGGCGGGACAAGATGGAAAA 60.611 55.000 0.00 0.00 0.00 2.29
675 1902 1.001393 GGGCGGGACAAGATGGAAA 60.001 57.895 0.00 0.00 0.00 3.13
677 1904 3.407967 GGGGCGGGACAAGATGGA 61.408 66.667 0.00 0.00 0.00 3.41
678 1905 4.856801 CGGGGCGGGACAAGATGG 62.857 72.222 0.00 0.00 0.00 3.51
685 1912 2.124445 AAAATAGCGGGGCGGGAC 60.124 61.111 0.00 0.00 0.00 4.46
686 1913 1.990160 ATCAAAATAGCGGGGCGGGA 61.990 55.000 0.00 0.00 0.00 5.14
688 1915 0.744281 AAATCAAAATAGCGGGGCGG 59.256 50.000 0.00 0.00 0.00 6.13
689 1916 2.577449 AAAATCAAAATAGCGGGGCG 57.423 45.000 0.00 0.00 0.00 6.13
760 2060 1.474879 GAAGGAAGTGACGGAGAGGAG 59.525 57.143 0.00 0.00 0.00 3.69
816 2121 2.106166 AAGCTGAGCTTCCATCTATGGG 59.894 50.000 15.01 0.00 46.77 4.00
834 2139 0.179113 CCTCCGCAAGAGAGAGAAGC 60.179 60.000 2.33 0.00 46.50 3.86
838 2143 0.248843 AAAGCCTCCGCAAGAGAGAG 59.751 55.000 2.33 0.00 46.50 3.20
930 2235 0.951040 GTTCTGTGCGGTTCTCCTGG 60.951 60.000 0.00 0.00 0.00 4.45
932 2237 0.468226 TTGTTCTGTGCGGTTCTCCT 59.532 50.000 0.00 0.00 0.00 3.69
933 2238 1.197721 CATTGTTCTGTGCGGTTCTCC 59.802 52.381 0.00 0.00 0.00 3.71
934 2239 1.873591 ACATTGTTCTGTGCGGTTCTC 59.126 47.619 0.00 0.00 0.00 2.87
935 2240 1.603802 CACATTGTTCTGTGCGGTTCT 59.396 47.619 0.00 0.00 40.03 3.01
1001 2326 1.233919 TAAATGCTGCGTGCTGAACA 58.766 45.000 2.69 0.00 43.37 3.18
1087 2413 6.180771 CAGAAAATGCTTCTTCCTCTTCTC 57.819 41.667 0.00 0.00 0.00 2.87
1107 2448 0.898326 TAAGCACGGTGGAGAGCAGA 60.898 55.000 10.60 0.00 0.00 4.26
1126 2467 3.018193 TGGTGGTGGTGGTGGTGT 61.018 61.111 0.00 0.00 0.00 4.16
1127 2468 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
1128 2469 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
1204 2545 5.306678 TGCTTCTTCCTCTTTCTCTTTCTCT 59.693 40.000 0.00 0.00 0.00 3.10
1205 2546 5.546526 TGCTTCTTCCTCTTTCTCTTTCTC 58.453 41.667 0.00 0.00 0.00 2.87
1207 2548 6.816134 AATGCTTCTTCCTCTTTCTCTTTC 57.184 37.500 0.00 0.00 0.00 2.62
1291 2882 0.035056 GAGGTGGTGGTGATGGAAGG 60.035 60.000 0.00 0.00 0.00 3.46
1443 3221 1.340017 GGTGGCCTCAAGAGCACAATA 60.340 52.381 3.32 0.00 0.00 1.90
1452 3230 3.691342 TCGACGGGTGGCCTCAAG 61.691 66.667 3.32 0.22 0.00 3.02
1453 3231 3.998672 GTCGACGGGTGGCCTCAA 61.999 66.667 3.32 0.00 0.00 3.02
1567 3345 1.441732 GCAAACCCGGTGAAGACGTT 61.442 55.000 0.00 0.00 0.00 3.99
1569 3347 2.613506 GGCAAACCCGGTGAAGACG 61.614 63.158 0.00 0.00 0.00 4.18
1608 3386 0.319900 TCTTGGACACGAGAGCAAGC 60.320 55.000 0.00 0.00 32.07 4.01
1614 3392 1.533033 TGCCCTCTTGGACACGAGA 60.533 57.895 7.32 0.00 35.78 4.04
1615 3393 1.079543 CTGCCCTCTTGGACACGAG 60.080 63.158 0.00 0.00 35.39 4.18
1617 3395 1.079543 CTCTGCCCTCTTGGACACG 60.080 63.158 0.00 0.00 35.39 4.49
1624 3402 0.886490 CGCACAAACTCTGCCCTCTT 60.886 55.000 0.00 0.00 0.00 2.85
1630 3408 4.389576 CGCCCGCACAAACTCTGC 62.390 66.667 0.00 0.00 0.00 4.26
1631 3409 2.058829 AAACGCCCGCACAAACTCTG 62.059 55.000 0.00 0.00 0.00 3.35
1673 3451 0.182537 TTCTTGGGTGTGAGTGGTGG 59.817 55.000 0.00 0.00 0.00 4.61
1701 3479 2.203126 CCGGCATCCCTCTTGAGC 60.203 66.667 0.00 0.00 0.00 4.26
1704 3482 1.750399 CAACCCGGCATCCCTCTTG 60.750 63.158 0.00 0.00 0.00 3.02
1705 3483 2.231380 ACAACCCGGCATCCCTCTT 61.231 57.895 0.00 0.00 0.00 2.85
1709 3487 3.995506 CTCCACAACCCGGCATCCC 62.996 68.421 0.00 0.00 0.00 3.85
1710 3488 2.438434 CTCCACAACCCGGCATCC 60.438 66.667 0.00 0.00 0.00 3.51
1720 3498 2.035449 CGTAGTTGGTGTCTCTCCACAA 59.965 50.000 0.00 0.00 37.06 3.33
1728 3506 1.585006 CTCGCCGTAGTTGGTGTCT 59.415 57.895 0.00 0.00 40.48 3.41
1740 3518 1.006805 GATGATGACTCCCTCGCCG 60.007 63.158 0.00 0.00 0.00 6.46
1746 3524 2.032620 ACTACACCGATGATGACTCCC 58.967 52.381 0.00 0.00 0.00 4.30
2154 3938 4.745125 TCTCGACTGAACTCAACATCAAAC 59.255 41.667 0.00 0.00 0.00 2.93
2173 3957 1.516386 CAATGACGACCGGGTCTCG 60.516 63.158 23.86 15.34 37.81 4.04
2174 3958 1.153628 CCAATGACGACCGGGTCTC 60.154 63.158 23.86 19.05 37.81 3.36
2258 4042 6.817641 CCATGGTGCAGAATTAGCAATAAAAA 59.182 34.615 2.57 0.00 44.64 1.94
2259 4043 6.070881 ACCATGGTGCAGAATTAGCAATAAAA 60.071 34.615 18.99 0.00 44.64 1.52
2268 4052 2.754552 GAGCAACCATGGTGCAGAATTA 59.245 45.455 29.08 0.00 37.41 1.40
2332 4116 3.064324 GCCGTTCCCAAGCTGCAT 61.064 61.111 1.02 0.00 0.00 3.96
2380 4164 3.375642 GCTTGGAGCTTGAGTTTGAAAC 58.624 45.455 0.00 0.00 38.45 2.78
2514 4307 8.127327 CCACTGATGTCAGATTTATTGATTGAC 58.873 37.037 16.41 0.00 46.59 3.18
2523 4316 5.101648 TGATGCCACTGATGTCAGATTTA 57.898 39.130 16.41 1.57 46.59 1.40
2526 4319 3.135895 TCATGATGCCACTGATGTCAGAT 59.864 43.478 16.41 0.00 46.59 2.90
2571 4364 5.104360 ACCAGCAGCTTTCCTATTTATCAGA 60.104 40.000 0.00 0.00 0.00 3.27
2624 4417 2.872842 GCCACGGTAACCTGTACAACAT 60.873 50.000 0.00 0.00 0.00 2.71
2627 4420 1.050204 AGCCACGGTAACCTGTACAA 58.950 50.000 0.00 0.00 0.00 2.41
2631 4424 0.036388 CATCAGCCACGGTAACCTGT 60.036 55.000 0.00 0.00 0.00 4.00
2637 4433 1.376683 GTTGCCATCAGCCACGGTA 60.377 57.895 0.00 0.00 42.71 4.02
2731 4527 0.036732 GCAACAGTGGGAGATGGACA 59.963 55.000 0.00 0.00 0.00 4.02
2796 4592 3.935203 CGGGTGCTAATATATCTGGCTTG 59.065 47.826 0.00 0.00 0.00 4.01
2886 4682 2.202570 GTCGACATGGACGTCCCG 60.203 66.667 31.19 25.39 37.93 5.14
2928 4724 3.390639 CAGGATGGGAGCTCTTGATAAGT 59.609 47.826 14.64 0.00 0.00 2.24
2932 4728 1.767681 GTCAGGATGGGAGCTCTTGAT 59.232 52.381 14.64 2.99 36.16 2.57
3090 4886 1.133668 ACAAGGCCTGGATCAATAGCC 60.134 52.381 16.25 3.49 44.20 3.93
3123 4919 4.219070 ACGTAGCCGGCATATTCAGTAATA 59.781 41.667 31.54 4.10 38.78 0.98
3145 4941 3.118629 TGATCACCAAGGAGAGCACATAC 60.119 47.826 0.30 0.00 0.00 2.39
3272 5068 3.953612 TCTGTTCACTGTGAATGGCTTTT 59.046 39.130 24.44 0.00 38.79 2.27
3275 5071 2.880890 GTTCTGTTCACTGTGAATGGCT 59.119 45.455 24.44 0.00 38.79 4.75
3317 5113 8.906867 CCATCTTCAGTGTGTATATGGAATTTT 58.093 33.333 0.00 0.00 35.48 1.82
3417 5213 0.320050 TGCTCACCGTCATGCTGTAA 59.680 50.000 0.00 0.00 0.00 2.41
3449 5245 1.339535 CCTCCAGAGACTTTTCCCTGC 60.340 57.143 0.00 0.00 0.00 4.85
3454 5250 5.187967 TGATACTTCCCTCCAGAGACTTTTC 59.812 44.000 0.00 0.00 0.00 2.29
3463 5259 1.415659 CCAGCTGATACTTCCCTCCAG 59.584 57.143 17.39 0.00 0.00 3.86
3491 5287 0.511221 ACTACGCACGACATGTTTGC 59.489 50.000 18.80 18.80 0.00 3.68
3492 5288 1.126113 GGACTACGCACGACATGTTTG 59.874 52.381 0.00 1.57 0.00 2.93
3522 5318 0.394625 GAGAGACTAGACCGGCCACT 60.395 60.000 0.00 0.78 0.00 4.00
3525 5321 1.076923 TGGAGAGACTAGACCGGCC 60.077 63.158 0.00 0.00 0.00 6.13
3527 5323 1.384525 CAGTGGAGAGACTAGACCGG 58.615 60.000 0.00 0.00 0.00 5.28
3530 5326 2.442413 ACAGCAGTGGAGAGACTAGAC 58.558 52.381 0.00 0.00 0.00 2.59
3536 5332 3.582647 TCCAAATTACAGCAGTGGAGAGA 59.417 43.478 0.00 0.00 33.43 3.10
3537 5333 3.942829 TCCAAATTACAGCAGTGGAGAG 58.057 45.455 0.00 0.00 33.43 3.20
3553 5349 8.861086 GGAGTAGATATGTGATACTCTTCCAAA 58.139 37.037 10.45 0.00 43.18 3.28
3554 5350 8.004801 TGGAGTAGATATGTGATACTCTTCCAA 58.995 37.037 10.45 0.00 43.18 3.53
3555 5351 7.526918 TGGAGTAGATATGTGATACTCTTCCA 58.473 38.462 10.45 0.00 43.18 3.53
3602 5627 9.892130 AAACCCTACTAATTAAGAGAGTCATTG 57.108 33.333 0.00 0.00 0.00 2.82
3612 5639 8.893727 CAGACAATGGAAACCCTACTAATTAAG 58.106 37.037 0.00 0.00 0.00 1.85
3617 5651 5.836024 ACAGACAATGGAAACCCTACTAA 57.164 39.130 0.00 0.00 0.00 2.24
3649 5683 6.127758 GCATGGATGTTACATGTCCAAACTTA 60.128 38.462 11.16 0.00 45.68 2.24
3659 5693 4.521256 TGGATGATGCATGGATGTTACATG 59.479 41.667 2.46 0.00 46.45 3.21
3660 5694 4.732065 TGGATGATGCATGGATGTTACAT 58.268 39.130 2.46 1.24 0.00 2.29
3663 5697 4.768448 GGAATGGATGATGCATGGATGTTA 59.232 41.667 2.46 0.00 0.00 2.41
3665 5699 3.162666 GGAATGGATGATGCATGGATGT 58.837 45.455 2.46 0.00 0.00 3.06
3673 5707 6.769822 CAGGGTTATATAGGAATGGATGATGC 59.230 42.308 0.00 0.00 0.00 3.91
3674 5708 7.865820 ACAGGGTTATATAGGAATGGATGATG 58.134 38.462 0.00 0.00 0.00 3.07
3675 5709 8.993424 GTACAGGGTTATATAGGAATGGATGAT 58.007 37.037 0.00 0.00 0.00 2.45
3678 5712 8.990693 AAGTACAGGGTTATATAGGAATGGAT 57.009 34.615 0.00 0.00 0.00 3.41
3679 5713 8.656806 CAAAGTACAGGGTTATATAGGAATGGA 58.343 37.037 0.00 0.00 0.00 3.41
3680 5714 8.656806 TCAAAGTACAGGGTTATATAGGAATGG 58.343 37.037 0.00 0.00 0.00 3.16
3737 5816 8.433421 ACAGATGTAAGTAAACCCGATAAATG 57.567 34.615 0.00 0.00 0.00 2.32
3741 5820 7.506599 TCCATACAGATGTAAGTAAACCCGATA 59.493 37.037 0.00 0.00 33.76 2.92
3745 5824 7.608761 TGTTTCCATACAGATGTAAGTAAACCC 59.391 37.037 11.40 0.00 33.33 4.11
3751 5830 6.179756 TGCATGTTTCCATACAGATGTAAGT 58.820 36.000 0.00 0.00 33.76 2.24
3761 5840 2.919666 AGCGTTGCATGTTTCCATAC 57.080 45.000 0.00 0.00 0.00 2.39
3762 5841 3.243035 GCATAGCGTTGCATGTTTCCATA 60.243 43.478 8.77 0.00 42.31 2.74
3772 5851 0.240678 CCAAACAGCATAGCGTTGCA 59.759 50.000 14.95 0.00 45.23 4.08
3773 5852 0.521291 TCCAAACAGCATAGCGTTGC 59.479 50.000 5.86 5.86 43.09 4.17
3778 5857 4.878397 AGTTCAGTATCCAAACAGCATAGC 59.122 41.667 0.00 0.00 0.00 2.97
3784 5863 3.753272 CCCACAGTTCAGTATCCAAACAG 59.247 47.826 0.00 0.00 0.00 3.16
3810 5889 8.813643 ATACGAAGCATAAGACAATAGGTTAC 57.186 34.615 0.00 0.00 0.00 2.50
3818 5897 8.394877 CCACAAATAATACGAAGCATAAGACAA 58.605 33.333 0.00 0.00 0.00 3.18
3819 5898 7.766738 TCCACAAATAATACGAAGCATAAGACA 59.233 33.333 0.00 0.00 0.00 3.41
3820 5899 8.138365 TCCACAAATAATACGAAGCATAAGAC 57.862 34.615 0.00 0.00 0.00 3.01
3822 5901 9.599322 GAATCCACAAATAATACGAAGCATAAG 57.401 33.333 0.00 0.00 0.00 1.73
3832 5913 6.919662 CACATGGCTGAATCCACAAATAATAC 59.080 38.462 0.00 0.00 39.25 1.89
3911 5993 7.731882 ATCTGCATCTAATTCAGTGAATCAG 57.268 36.000 18.52 18.01 30.29 2.90
3944 6028 8.593492 AAATAAGCACAAATCTCAAAACCTTC 57.407 30.769 0.00 0.00 0.00 3.46
3963 6047 5.700832 TCAGAGCATATGGGCGTAAAATAAG 59.299 40.000 4.56 0.00 39.27 1.73
3993 6077 2.762887 TGCCACATTCTTGAAACACCAA 59.237 40.909 0.00 0.00 0.00 3.67
4026 6110 1.135721 GCTCATCCCTTGTTTCATGCC 59.864 52.381 0.00 0.00 0.00 4.40
4027 6111 2.097825 AGCTCATCCCTTGTTTCATGC 58.902 47.619 0.00 0.00 0.00 4.06
4030 6114 3.507162 TTCAGCTCATCCCTTGTTTCA 57.493 42.857 0.00 0.00 0.00 2.69
4047 6131 3.252215 CCTGTTACAAGGCAACGAATTCA 59.748 43.478 6.22 0.00 46.39 2.57
4054 6138 2.949644 ACTGAACCTGTTACAAGGCAAC 59.050 45.455 1.73 0.00 41.46 4.17
4070 6154 1.143684 AGGAGAAGGCAAGCAACTGAA 59.856 47.619 0.00 0.00 0.00 3.02
4076 6161 0.767375 AGTTCAGGAGAAGGCAAGCA 59.233 50.000 0.00 0.00 33.63 3.91
4077 6162 2.770164 TAGTTCAGGAGAAGGCAAGC 57.230 50.000 0.00 0.00 33.63 4.01
4089 6174 7.550551 TCTGAGCAAAGGATACAAATAGTTCAG 59.449 37.037 0.00 0.00 41.41 3.02
4090 6175 7.394016 TCTGAGCAAAGGATACAAATAGTTCA 58.606 34.615 0.00 0.00 41.41 3.18
4091 6176 7.849804 TCTGAGCAAAGGATACAAATAGTTC 57.150 36.000 0.00 0.00 41.41 3.01
4105 6190 5.735354 GCATAACCATGGAATCTGAGCAAAG 60.735 44.000 21.47 0.00 32.36 2.77
4113 6198 4.356405 TCATCGCATAACCATGGAATCT 57.644 40.909 21.47 2.03 32.36 2.40
4115 6200 4.654915 TCATCATCGCATAACCATGGAAT 58.345 39.130 21.47 8.72 32.36 3.01
4133 6218 7.768120 ACATAGTGAAAGGAGAGAACAATCATC 59.232 37.037 0.00 0.00 0.00 2.92
4134 6219 7.628234 ACATAGTGAAAGGAGAGAACAATCAT 58.372 34.615 0.00 0.00 0.00 2.45
4160 6245 3.370953 CCTCCTGTTGCCTAGCTACAAAT 60.371 47.826 5.44 0.00 42.66 2.32
4174 6259 2.909006 TCAGAATTCAGCTCCTCCTGTT 59.091 45.455 8.44 0.00 34.47 3.16
4190 6275 8.902540 TCTGCTAAGAAAACATTACTTCAGAA 57.097 30.769 0.00 0.00 28.74 3.02
4191 6276 7.604164 CCTCTGCTAAGAAAACATTACTTCAGA 59.396 37.037 0.00 0.00 30.03 3.27
4194 6279 7.674471 ACCTCTGCTAAGAAAACATTACTTC 57.326 36.000 0.00 0.00 30.03 3.01
4199 6284 6.959639 TCAAACCTCTGCTAAGAAAACATT 57.040 33.333 0.00 0.00 30.03 2.71
4200 6285 6.716628 TGATCAAACCTCTGCTAAGAAAACAT 59.283 34.615 0.00 0.00 30.03 2.71
4202 6287 6.560253 TGATCAAACCTCTGCTAAGAAAAC 57.440 37.500 0.00 0.00 30.03 2.43
4207 6292 5.879223 AGTCATTGATCAAACCTCTGCTAAG 59.121 40.000 13.09 0.00 0.00 2.18
4310 6395 9.760660 GCACAGATTCACAACTATAAGTAAAAG 57.239 33.333 0.00 0.00 0.00 2.27
4311 6396 9.278978 TGCACAGATTCACAACTATAAGTAAAA 57.721 29.630 0.00 0.00 0.00 1.52
4312 6397 8.840833 TGCACAGATTCACAACTATAAGTAAA 57.159 30.769 0.00 0.00 0.00 2.01
4322 6410 1.270274 TGGCATGCACAGATTCACAAC 59.730 47.619 21.36 0.00 0.00 3.32
4352 6440 5.187772 TGGACATGAAGCTAGTGAACACTAT 59.812 40.000 13.85 1.45 42.44 2.12
4355 6443 3.664107 TGGACATGAAGCTAGTGAACAC 58.336 45.455 0.00 0.00 0.00 3.32
4363 6451 2.296190 ACGCGATATGGACATGAAGCTA 59.704 45.455 15.93 0.00 0.00 3.32
4370 6458 1.138069 TCCAACACGCGATATGGACAT 59.862 47.619 15.93 0.00 37.05 3.06
4381 6469 1.534175 CCGACTCTCTATCCAACACGC 60.534 57.143 0.00 0.00 0.00 5.34
4383 6471 4.098044 TCATTCCGACTCTCTATCCAACAC 59.902 45.833 0.00 0.00 0.00 3.32
4384 6472 4.278310 TCATTCCGACTCTCTATCCAACA 58.722 43.478 0.00 0.00 0.00 3.33
4393 6482 7.806014 GTCAAGATAGTATTCATTCCGACTCTC 59.194 40.741 0.00 0.00 0.00 3.20
4395 6484 7.426410 TGTCAAGATAGTATTCATTCCGACTC 58.574 38.462 0.00 0.00 0.00 3.36
4412 6501 5.296283 GCATTGCTCAGAAGTATGTCAAGAT 59.704 40.000 0.16 0.00 0.00 2.40
4425 6514 0.627451 ATTCCAGGGCATTGCTCAGA 59.373 50.000 11.86 4.15 0.00 3.27
4426 6515 0.744874 CATTCCAGGGCATTGCTCAG 59.255 55.000 11.86 2.02 0.00 3.35
4440 6564 4.878397 CCAATCTCAGTTAGGTGTCATTCC 59.122 45.833 0.00 0.00 0.00 3.01
4446 6570 1.985159 TGCCCAATCTCAGTTAGGTGT 59.015 47.619 0.00 0.00 0.00 4.16
4456 6580 7.775120 TCAAAGATCTTTTATTGCCCAATCTC 58.225 34.615 18.16 0.00 32.50 2.75
4464 6588 9.860898 ACCACTAATTCAAAGATCTTTTATTGC 57.139 29.630 23.33 0.00 0.00 3.56
4495 6619 3.262420 CATGCTACACCAAGGTAGACAC 58.738 50.000 4.63 0.00 42.68 3.67
4513 6637 1.870055 AACCTTTCGCTGGCAGCATG 61.870 55.000 35.94 22.33 42.58 4.06
4514 6638 1.604593 AACCTTTCGCTGGCAGCAT 60.605 52.632 35.94 13.10 42.58 3.79
4515 6639 2.203337 AACCTTTCGCTGGCAGCA 60.203 55.556 35.94 21.62 42.58 4.41
4516 6640 2.256461 CAACCTTTCGCTGGCAGC 59.744 61.111 29.22 29.22 38.02 5.25
4517 6641 1.165907 TCACAACCTTTCGCTGGCAG 61.166 55.000 10.94 10.94 0.00 4.85
4518 6642 1.153066 TCACAACCTTTCGCTGGCA 60.153 52.632 0.00 0.00 0.00 4.92
4519 6643 1.166531 ACTCACAACCTTTCGCTGGC 61.167 55.000 0.00 0.00 0.00 4.85
4520 6644 1.002468 CAACTCACAACCTTTCGCTGG 60.002 52.381 0.00 0.00 0.00 4.85
4521 6645 1.670811 ACAACTCACAACCTTTCGCTG 59.329 47.619 0.00 0.00 0.00 5.18
4522 6646 2.038387 ACAACTCACAACCTTTCGCT 57.962 45.000 0.00 0.00 0.00 4.93
4523 6647 2.844122 AACAACTCACAACCTTTCGC 57.156 45.000 0.00 0.00 0.00 4.70
4524 6648 3.302870 CGGTAACAACTCACAACCTTTCG 60.303 47.826 0.00 0.00 0.00 3.46
4525 6649 3.624410 ACGGTAACAACTCACAACCTTTC 59.376 43.478 0.00 0.00 0.00 2.62
4526 6650 3.613030 ACGGTAACAACTCACAACCTTT 58.387 40.909 0.00 0.00 0.00 3.11
4527 6651 3.271055 ACGGTAACAACTCACAACCTT 57.729 42.857 0.00 0.00 0.00 3.50
4528 6652 2.994186 ACGGTAACAACTCACAACCT 57.006 45.000 0.00 0.00 0.00 3.50
4529 6653 4.992951 AGAATACGGTAACAACTCACAACC 59.007 41.667 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.