Multiple sequence alignment - TraesCS1B01G179300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G179300 chr1B 100.000 1970 0 0 952 2921 325297241 325299210 0.000000e+00 3639
1 TraesCS1B01G179300 chr1B 100.000 507 0 0 1 507 325296290 325296796 0.000000e+00 937
2 TraesCS1B01G179300 chr1B 91.086 359 25 5 1282 1640 612222931 612223282 2.040000e-131 479
3 TraesCS1B01G179300 chr1A 91.650 1964 117 14 959 2892 292746220 292744274 0.000000e+00 2675
4 TraesCS1B01G179300 chr1A 90.170 529 12 11 1 504 292746802 292746289 0.000000e+00 652
5 TraesCS1B01G179300 chr1A 91.150 226 20 0 1282 1507 97804967 97804742 1.020000e-79 307
6 TraesCS1B01G179300 chr1D 93.164 1697 68 20 989 2651 225431727 225433409 0.000000e+00 2447
7 TraesCS1B01G179300 chr1D 91.747 521 17 11 1 504 225431134 225431645 0.000000e+00 701
8 TraesCS1B01G179300 chr1D 87.019 208 12 2 2685 2892 225433411 225433603 1.360000e-53 220
9 TraesCS1B01G179300 chr5B 91.643 359 23 5 1282 1640 96016973 96016622 9.410000e-135 490
10 TraesCS1B01G179300 chr6B 93.030 330 16 5 1311 1640 713457822 713457500 2.630000e-130 475
11 TraesCS1B01G179300 chr7A 92.447 331 18 5 1310 1640 642102217 642101894 1.590000e-127 466
12 TraesCS1B01G179300 chr3B 92.145 331 19 5 1310 1640 52652193 52651870 7.380000e-126 460
13 TraesCS1B01G179300 chr4A 97.037 135 4 0 1310 1444 730989590 730989724 8.140000e-56 228


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G179300 chr1B 325296290 325299210 2920 False 2288.000000 3639 100.000000 1 2921 2 chr1B.!!$F2 2920
1 TraesCS1B01G179300 chr1A 292744274 292746802 2528 True 1663.500000 2675 90.910000 1 2892 2 chr1A.!!$R2 2891
2 TraesCS1B01G179300 chr1D 225431134 225433603 2469 False 1122.666667 2447 90.643333 1 2892 3 chr1D.!!$F1 2891

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 191 0.107831 ACTGCGGTTAAACCTGCTCA 59.892 50.0 0.0 0.0 38.17 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2111 2157 0.673985 TCCATCGTTCCATCTAGGCG 59.326 55.0 0.0 0.0 37.29 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 87 3.769739 TCATCCACCATACTATGCACC 57.230 47.619 0.00 0.00 0.00 5.01
92 96 4.077108 CCATACTATGCACCGGTAGTAGA 58.923 47.826 17.56 5.47 36.98 2.59
171 191 0.107831 ACTGCGGTTAAACCTGCTCA 59.892 50.000 0.00 0.00 38.17 4.26
172 192 1.271379 ACTGCGGTTAAACCTGCTCAT 60.271 47.619 0.00 0.00 38.17 2.90
173 193 1.812571 CTGCGGTTAAACCTGCTCATT 59.187 47.619 0.00 0.00 38.17 2.57
174 194 1.539388 TGCGGTTAAACCTGCTCATTG 59.461 47.619 0.00 0.00 38.17 2.82
175 195 1.732405 GCGGTTAAACCTGCTCATTGC 60.732 52.381 0.00 0.00 35.66 3.56
176 196 1.812571 CGGTTAAACCTGCTCATTGCT 59.187 47.619 0.00 0.00 35.66 3.91
177 197 2.228822 CGGTTAAACCTGCTCATTGCTT 59.771 45.455 0.00 0.00 35.66 3.91
178 198 3.670627 CGGTTAAACCTGCTCATTGCTTC 60.671 47.826 0.00 0.00 35.66 3.86
179 199 3.507622 GGTTAAACCTGCTCATTGCTTCT 59.492 43.478 0.00 0.00 43.37 2.85
180 200 4.379918 GGTTAAACCTGCTCATTGCTTCTC 60.380 45.833 0.00 0.00 43.37 2.87
264 294 7.969536 ATATATGTTAAGCTGTAGCCTGTTG 57.030 36.000 0.00 0.00 43.38 3.33
277 307 1.068954 GCCTGTTGCACTCAGTTAAGC 60.069 52.381 14.40 8.52 40.77 3.09
336 366 2.034558 GGGTGCAACATTGGATATTCCG 59.965 50.000 3.06 0.00 37.89 4.30
337 367 2.687935 GGTGCAACATTGGATATTCCGT 59.312 45.455 0.00 0.00 37.89 4.69
338 368 3.130340 GGTGCAACATTGGATATTCCGTT 59.870 43.478 0.00 0.00 37.89 4.44
339 369 4.351192 GTGCAACATTGGATATTCCGTTC 58.649 43.478 0.00 0.00 36.45 3.95
340 370 3.380004 TGCAACATTGGATATTCCGTTCC 59.620 43.478 0.00 0.00 40.17 3.62
366 397 8.850454 TTATTTTGTTCTTTCCTCGAAACTTG 57.150 30.769 0.00 0.00 0.00 3.16
504 541 0.260523 GTACCTCAGCTCCTCCTCCT 59.739 60.000 0.00 0.00 0.00 3.69
505 542 0.553819 TACCTCAGCTCCTCCTCCTC 59.446 60.000 0.00 0.00 0.00 3.71
985 1022 3.541713 CCCCTCTCGTGGCCTAGC 61.542 72.222 3.32 0.00 0.00 3.42
987 1024 2.496817 CCTCTCGTGGCCTAGCAC 59.503 66.667 3.32 0.00 0.00 4.40
993 1031 1.805945 CGTGGCCTAGCACGTCTTC 60.806 63.158 3.32 0.00 39.64 2.87
1019 1057 2.500910 AGATGAACTGCTCCTTCCTCAG 59.499 50.000 0.00 0.00 0.00 3.35
1023 1061 2.203983 TGCTCCTTCCTCAGGGCA 60.204 61.111 0.00 0.00 44.12 5.36
1108 1146 3.839432 CGCCTCTCCCCTCCGTTC 61.839 72.222 0.00 0.00 0.00 3.95
1121 1159 0.680280 TCCGTTCTCCTCTTCTCCCG 60.680 60.000 0.00 0.00 0.00 5.14
1478 1519 2.875684 GAACGCAGCGAGGAGGAGAC 62.876 65.000 24.65 0.00 0.00 3.36
1491 1532 4.500116 GAGACGCCGACAGCCTCC 62.500 72.222 0.00 0.00 38.78 4.30
1515 1556 3.749064 GCGACTGAGTCCGAGGCA 61.749 66.667 7.07 0.00 0.00 4.75
1922 1963 1.529948 CCCCCATCCGCGTCTAGTA 60.530 63.158 4.92 0.00 0.00 1.82
2094 2140 5.818336 AGCATCATCATCAAGAGACAAAGAG 59.182 40.000 0.00 0.00 0.00 2.85
2142 2188 0.172803 ACGATGGAAGGACTGCGTAC 59.827 55.000 0.00 0.00 0.00 3.67
2147 2193 0.100146 GGAAGGACTGCGTACGTAGG 59.900 60.000 31.98 17.10 32.04 3.18
2148 2194 0.807496 GAAGGACTGCGTACGTAGGT 59.193 55.000 31.98 19.81 32.04 3.08
2149 2195 2.009774 GAAGGACTGCGTACGTAGGTA 58.990 52.381 31.98 11.09 32.04 3.08
2151 2197 1.208052 AGGACTGCGTACGTAGGTAGA 59.792 52.381 31.98 10.75 32.04 2.59
2153 2199 2.544685 GACTGCGTACGTAGGTAGAGA 58.455 52.381 31.98 6.64 32.04 3.10
2160 2206 4.036144 GCGTACGTAGGTAGAGAAAGGATT 59.964 45.833 17.90 0.00 0.00 3.01
2240 2286 1.139734 TCCTGCAGCTTCGATCGAC 59.860 57.895 19.26 7.54 0.00 4.20
2301 2351 4.267928 GTGAGGAATCAACGCTACATGTAC 59.732 45.833 0.08 0.00 0.00 2.90
2404 2454 2.813908 CCCTGTCCGTAGCGCAAC 60.814 66.667 11.47 0.00 0.00 4.17
2448 2499 3.863142 AATTCATCTCACTTGCCTTGC 57.137 42.857 0.00 0.00 0.00 4.01
2481 2539 4.697352 AGGATGTGTGCTTGATAACTGAAC 59.303 41.667 0.00 0.00 0.00 3.18
2488 2546 4.093556 GTGCTTGATAACTGAACAGGTAGC 59.906 45.833 8.00 8.00 37.51 3.58
2506 2585 0.100682 GCTGTGAGCATGCATCAAGG 59.899 55.000 21.98 15.37 41.89 3.61
2533 2612 8.831550 GGATTCTGGATTTCACTGATTTAGTAC 58.168 37.037 0.00 0.00 37.60 2.73
2536 2615 9.739276 TTCTGGATTTCACTGATTTAGTACAAT 57.261 29.630 0.00 0.00 37.60 2.71
2592 2671 7.525158 TTGGAGGGAGTAGAGGATTAAAATT 57.475 36.000 0.00 0.00 0.00 1.82
2675 2754 0.178068 GCCAGCCTCTTTGGATCGTA 59.822 55.000 0.00 0.00 37.96 3.43
2798 2877 8.581578 GGTATTTGGTCCACAGAAATAGAAAAA 58.418 33.333 0.00 0.00 0.00 1.94
2818 2897 9.559958 AGAAAAACATGTTGATCTTAATAAGCG 57.440 29.630 12.82 0.00 0.00 4.68
2828 2907 7.320443 TGATCTTAATAAGCGCAATCAAAGT 57.680 32.000 11.47 0.00 0.00 2.66
2829 2908 8.432110 TGATCTTAATAAGCGCAATCAAAGTA 57.568 30.769 11.47 0.00 0.00 2.24
2830 2909 8.888716 TGATCTTAATAAGCGCAATCAAAGTAA 58.111 29.630 11.47 0.00 0.00 2.24
2831 2910 9.374960 GATCTTAATAAGCGCAATCAAAGTAAG 57.625 33.333 11.47 7.38 0.00 2.34
2832 2911 7.186804 TCTTAATAAGCGCAATCAAAGTAAGC 58.813 34.615 11.47 0.00 0.00 3.09
2835 2914 3.674225 CGCAATCAAAGTAAGCGCA 57.326 47.368 11.47 0.00 41.95 6.09
2836 2915 1.962412 CGCAATCAAAGTAAGCGCAA 58.038 45.000 11.47 0.00 41.95 4.85
2837 2916 2.518949 CGCAATCAAAGTAAGCGCAAT 58.481 42.857 11.47 0.00 41.95 3.56
2838 2917 2.527487 CGCAATCAAAGTAAGCGCAATC 59.473 45.455 11.47 0.00 41.95 2.67
2839 2918 3.500982 GCAATCAAAGTAAGCGCAATCA 58.499 40.909 11.47 0.00 0.00 2.57
2840 2919 3.919804 GCAATCAAAGTAAGCGCAATCAA 59.080 39.130 11.47 0.00 0.00 2.57
2841 2920 4.385447 GCAATCAAAGTAAGCGCAATCAAA 59.615 37.500 11.47 0.00 0.00 2.69
2842 2921 5.443693 GCAATCAAAGTAAGCGCAATCAAAG 60.444 40.000 11.47 0.00 0.00 2.77
2907 2986 9.739276 ATTAGACCTTTGTATCACATTCTTTGA 57.261 29.630 0.00 0.00 0.00 2.69
2908 2987 9.567776 TTAGACCTTTGTATCACATTCTTTGAA 57.432 29.630 0.00 0.00 0.00 2.69
2909 2988 7.875971 AGACCTTTGTATCACATTCTTTGAAC 58.124 34.615 0.00 0.00 0.00 3.18
2910 2989 6.668323 ACCTTTGTATCACATTCTTTGAACG 58.332 36.000 0.00 0.00 0.00 3.95
2911 2990 6.262273 ACCTTTGTATCACATTCTTTGAACGT 59.738 34.615 0.00 0.00 0.00 3.99
2912 2991 7.442969 ACCTTTGTATCACATTCTTTGAACGTA 59.557 33.333 0.00 0.00 0.00 3.57
2913 2992 7.744715 CCTTTGTATCACATTCTTTGAACGTAC 59.255 37.037 0.00 0.00 0.00 3.67
2914 2993 6.384178 TGTATCACATTCTTTGAACGTACG 57.616 37.500 15.01 15.01 0.00 3.67
2915 2994 6.151004 TGTATCACATTCTTTGAACGTACGA 58.849 36.000 24.41 0.00 0.00 3.43
2916 2995 6.641723 TGTATCACATTCTTTGAACGTACGAA 59.358 34.615 24.41 2.51 0.00 3.85
2917 2996 6.721571 ATCACATTCTTTGAACGTACGAAT 57.278 33.333 24.41 10.35 0.00 3.34
2918 2997 6.533819 TCACATTCTTTGAACGTACGAATT 57.466 33.333 24.41 6.54 0.00 2.17
2919 2998 7.640616 TCACATTCTTTGAACGTACGAATTA 57.359 32.000 24.41 4.17 0.00 1.40
2920 2999 7.503991 TCACATTCTTTGAACGTACGAATTAC 58.496 34.615 24.41 8.41 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 87 7.223260 TCAAACACCCATATATCTACTACCG 57.777 40.000 0.00 0.00 0.00 4.02
92 96 6.772716 GGTCAGTCAATCAAACACCCATATAT 59.227 38.462 0.00 0.00 0.00 0.86
171 191 6.157645 TGATTAAGGAGGAAGAGAGAAGCAAT 59.842 38.462 0.00 0.00 0.00 3.56
172 192 5.485353 TGATTAAGGAGGAAGAGAGAAGCAA 59.515 40.000 0.00 0.00 0.00 3.91
173 193 5.026121 TGATTAAGGAGGAAGAGAGAAGCA 58.974 41.667 0.00 0.00 0.00 3.91
174 194 5.606348 TGATTAAGGAGGAAGAGAGAAGC 57.394 43.478 0.00 0.00 0.00 3.86
175 195 6.821160 GGTTTGATTAAGGAGGAAGAGAGAAG 59.179 42.308 0.00 0.00 0.00 2.85
176 196 6.272324 TGGTTTGATTAAGGAGGAAGAGAGAA 59.728 38.462 0.00 0.00 0.00 2.87
177 197 5.785423 TGGTTTGATTAAGGAGGAAGAGAGA 59.215 40.000 0.00 0.00 0.00 3.10
178 198 6.054860 TGGTTTGATTAAGGAGGAAGAGAG 57.945 41.667 0.00 0.00 0.00 3.20
179 199 6.642733 ATGGTTTGATTAAGGAGGAAGAGA 57.357 37.500 0.00 0.00 0.00 3.10
180 200 7.709149 AAATGGTTTGATTAAGGAGGAAGAG 57.291 36.000 0.00 0.00 0.00 2.85
264 294 0.790814 GACCGTGCTTAACTGAGTGC 59.209 55.000 0.00 0.00 0.00 4.40
336 366 7.198306 TCGAGGAAAGAACAAAATAAGGAAC 57.802 36.000 0.00 0.00 0.00 3.62
337 367 7.811117 TTCGAGGAAAGAACAAAATAAGGAA 57.189 32.000 0.00 0.00 0.00 3.36
338 368 7.501225 AGTTTCGAGGAAAGAACAAAATAAGGA 59.499 33.333 0.00 0.00 31.87 3.36
339 369 7.649057 AGTTTCGAGGAAAGAACAAAATAAGG 58.351 34.615 0.00 0.00 31.87 2.69
340 370 8.958043 CAAGTTTCGAGGAAAGAACAAAATAAG 58.042 33.333 0.00 0.00 31.87 1.73
426 457 7.254932 GCACGCTAAAGATATTTCCATCTTCTT 60.255 37.037 0.00 0.00 43.01 2.52
428 459 6.366630 GCACGCTAAAGATATTTCCATCTTC 58.633 40.000 0.00 0.00 43.01 2.87
951 988 2.825836 GGGAGGATGGCGTGCAAG 60.826 66.667 0.00 0.00 0.00 4.01
952 989 4.424711 GGGGAGGATGGCGTGCAA 62.425 66.667 0.00 0.00 0.00 4.08
977 1014 2.656069 GGGAAGACGTGCTAGGCCA 61.656 63.158 5.01 0.00 0.00 5.36
980 1017 2.005960 CTCGGGGAAGACGTGCTAGG 62.006 65.000 0.00 0.00 0.00 3.02
985 1022 0.530744 TTCATCTCGGGGAAGACGTG 59.469 55.000 0.00 0.00 0.00 4.49
987 1024 0.818296 AGTTCATCTCGGGGAAGACG 59.182 55.000 0.00 0.00 0.00 4.18
993 1031 1.144936 GGAGCAGTTCATCTCGGGG 59.855 63.158 0.00 0.00 0.00 5.73
1102 1140 0.680280 CGGGAGAAGAGGAGAACGGA 60.680 60.000 0.00 0.00 0.00 4.69
1108 1146 1.040339 CAGGGACGGGAGAAGAGGAG 61.040 65.000 0.00 0.00 0.00 3.69
1121 1159 2.579684 GATCCACAGGACGCAGGGAC 62.580 65.000 0.00 0.00 32.98 4.46
1257 1298 4.506039 TCGTGTTCCGAGGAAGGA 57.494 55.556 4.57 0.91 41.60 3.36
1497 1538 3.749064 GCCTCGGACTCAGTCGCA 61.749 66.667 0.00 0.00 32.65 5.10
1503 1544 3.059982 CCAACTGCCTCGGACTCA 58.940 61.111 0.00 0.00 0.00 3.41
1507 1548 4.373116 GACGCCAACTGCCTCGGA 62.373 66.667 0.00 0.00 36.24 4.55
1510 1551 3.112709 GTCGACGCCAACTGCCTC 61.113 66.667 0.00 0.00 36.24 4.70
1524 1565 1.800315 GTCCATGGACACGTCGTCG 60.800 63.158 35.21 0.00 46.42 5.12
1536 1577 4.758251 TGCCACGCCGAGTCCATG 62.758 66.667 0.00 0.00 0.00 3.66
1905 1946 1.957562 CTACTAGACGCGGATGGGG 59.042 63.158 12.47 0.00 0.00 4.96
1993 2039 2.263741 GCGTGCATCCATCCATCCC 61.264 63.158 0.00 0.00 0.00 3.85
2068 2114 6.760298 TCTTTGTCTCTTGATGATGATGCTAC 59.240 38.462 0.00 0.00 0.00 3.58
2107 2153 2.230940 CGTTCCATCTAGGCGTGCG 61.231 63.158 0.00 0.00 37.29 5.34
2111 2157 0.673985 TCCATCGTTCCATCTAGGCG 59.326 55.000 0.00 0.00 37.29 5.52
2142 2188 3.550436 GCCGAATCCTTTCTCTACCTACG 60.550 52.174 0.00 0.00 0.00 3.51
2147 2193 2.981859 TGGCCGAATCCTTTCTCTAC 57.018 50.000 0.00 0.00 0.00 2.59
2148 2194 2.104792 CCATGGCCGAATCCTTTCTCTA 59.895 50.000 0.00 0.00 0.00 2.43
2149 2195 1.133976 CCATGGCCGAATCCTTTCTCT 60.134 52.381 0.00 0.00 0.00 3.10
2151 2197 0.753111 GCCATGGCCGAATCCTTTCT 60.753 55.000 27.24 0.00 34.56 2.52
2153 2199 1.039233 CAGCCATGGCCGAATCCTTT 61.039 55.000 33.14 8.45 43.17 3.11
2160 2206 3.094062 GCTAGACAGCCATGGCCGA 62.094 63.158 33.14 13.26 42.37 5.54
2404 2454 9.933723 ATTTTCTTGTGGATTTCCTAGAAATTG 57.066 29.630 15.94 0.00 37.86 2.32
2481 2539 0.392060 TGCATGCTCACAGCTACCTG 60.392 55.000 20.33 0.00 42.97 4.00
2488 2546 0.738975 CCCTTGATGCATGCTCACAG 59.261 55.000 20.33 16.48 0.00 3.66
2506 2585 6.830838 ACTAAATCAGTGAAATCCAGAATCCC 59.169 38.462 0.00 0.00 35.62 3.85
2565 2644 2.777459 TCCTCTACTCCCTCCAATCC 57.223 55.000 0.00 0.00 0.00 3.01
2612 2691 1.412710 TGCAATCCTACGATCAGGGAC 59.587 52.381 0.00 0.00 36.26 4.46
2651 2730 2.753043 CAAAGAGGCTGGCCGCAT 60.753 61.111 18.87 13.29 41.67 4.73
2713 2792 6.866010 TTTGTGCATGCACTCCTATTATAG 57.134 37.500 41.43 0.00 46.30 1.31
2741 2820 9.773328 TTTCAAGATTCTCGCATTTTACTATTG 57.227 29.630 0.00 0.00 0.00 1.90
2742 2821 9.774742 GTTTCAAGATTCTCGCATTTTACTATT 57.225 29.630 0.00 0.00 0.00 1.73
2745 2824 7.440523 AGTTTCAAGATTCTCGCATTTTACT 57.559 32.000 0.00 0.00 0.00 2.24
2756 2835 6.782494 ACCAAATACCCAAGTTTCAAGATTCT 59.218 34.615 0.00 0.00 0.00 2.40
2798 2877 6.435430 TTGCGCTTATTAAGATCAACATGT 57.565 33.333 9.73 0.00 0.00 3.21
2818 2897 3.500982 TGATTGCGCTTACTTTGATTGC 58.499 40.909 9.73 0.00 0.00 3.56
2828 2907 5.933187 TGACTTTACTTTGATTGCGCTTA 57.067 34.783 9.73 0.00 0.00 3.09
2829 2908 4.829064 TGACTTTACTTTGATTGCGCTT 57.171 36.364 9.73 0.00 0.00 4.68
2830 2909 4.829064 TTGACTTTACTTTGATTGCGCT 57.171 36.364 9.73 0.00 0.00 5.92
2831 2910 4.148174 GGTTTGACTTTACTTTGATTGCGC 59.852 41.667 0.00 0.00 0.00 6.09
2832 2911 5.277825 TGGTTTGACTTTACTTTGATTGCG 58.722 37.500 0.00 0.00 0.00 4.85
2833 2912 8.863049 CATATGGTTTGACTTTACTTTGATTGC 58.137 33.333 0.00 0.00 0.00 3.56
2892 2971 6.621737 TCGTACGTTCAAAGAATGTGATAC 57.378 37.500 16.05 4.71 28.31 2.24
2893 2972 7.821595 ATTCGTACGTTCAAAGAATGTGATA 57.178 32.000 16.05 0.00 28.31 2.15
2894 2973 6.721571 ATTCGTACGTTCAAAGAATGTGAT 57.278 33.333 16.05 2.22 28.31 3.06
2895 2974 6.533819 AATTCGTACGTTCAAAGAATGTGA 57.466 33.333 16.05 2.45 32.59 3.58
2896 2975 7.686105 GTAATTCGTACGTTCAAAGAATGTG 57.314 36.000 16.05 0.35 32.59 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.