Multiple sequence alignment - TraesCS1B01G179100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G179100 chr1B 100.000 4595 0 0 1 4595 324777723 324782317 0.000000e+00 8486
1 TraesCS1B01G179100 chr1B 98.131 107 2 0 4068 4174 324781588 324781694 2.180000e-43 187
2 TraesCS1B01G179100 chr1B 98.131 107 2 0 3866 3972 324781790 324781896 2.180000e-43 187
3 TraesCS1B01G179100 chr1B 95.890 73 3 0 4002 4074 324781896 324781968 8.080000e-23 119
4 TraesCS1B01G179100 chr1A 92.337 3993 200 37 1 3948 292882690 292878759 0.000000e+00 5581
5 TraesCS1B01G179100 chr1A 93.976 83 5 0 4068 4150 292878841 292878759 4.830000e-25 126
6 TraesCS1B01G179100 chr1D 95.190 2162 95 7 831 2984 225059099 225061259 0.000000e+00 3408
7 TraesCS1B01G179100 chr1D 90.899 945 57 8 3023 3949 225061259 225062192 0.000000e+00 1242
8 TraesCS1B01G179100 chr1D 80.927 561 49 23 1 506 225003001 225003558 1.550000e-104 390
9 TraesCS1B01G179100 chr1D 87.742 310 32 3 468 776 225038709 225039013 1.570000e-94 357
10 TraesCS1B01G179100 chr4D 87.872 437 37 6 4172 4594 329286093 329286527 2.470000e-137 499
11 TraesCS1B01G179100 chr4D 96.341 82 3 0 805 886 18735311 18735392 8.020000e-28 135
12 TraesCS1B01G179100 chr4D 94.805 77 4 0 805 881 18734066 18734142 2.250000e-23 121
13 TraesCS1B01G179100 chr5D 87.150 428 47 5 4173 4595 71549873 71550297 3.220000e-131 479
14 TraesCS1B01G179100 chr5D 86.605 433 44 7 4172 4590 337687496 337687064 2.500000e-127 466
15 TraesCS1B01G179100 chr2B 86.499 437 46 3 4172 4595 78021438 78021874 6.960000e-128 468
16 TraesCS1B01G179100 chr2B 85.880 432 49 9 4172 4592 758379714 758380144 2.520000e-122 449
17 TraesCS1B01G179100 chr3D 86.374 433 49 8 4172 4595 134002594 134002163 9.000000e-127 464
18 TraesCS1B01G179100 chr2D 86.429 420 48 7 4182 4593 617629879 617629461 7.010000e-123 451
19 TraesCS1B01G179100 chr2D 85.417 432 46 11 4172 4590 639202784 639203211 2.540000e-117 433
20 TraesCS1B01G179100 chr2D 83.594 128 19 1 3947 4072 37515387 37515514 8.080000e-23 119
21 TraesCS1B01G179100 chr6B 85.616 438 49 5 4172 4595 495804594 495805031 9.070000e-122 448
22 TraesCS1B01G179100 chr4A 95.789 95 4 0 791 885 582505959 582505865 2.210000e-33 154
23 TraesCS1B01G179100 chr4B 97.561 82 2 0 804 885 30842666 30842747 1.720000e-29 141
24 TraesCS1B01G179100 chr4B 97.436 78 2 0 805 882 30841036 30841113 2.880000e-27 134
25 TraesCS1B01G179100 chr7D 83.969 131 13 3 3949 4072 14935590 14935719 8.080000e-23 119
26 TraesCS1B01G179100 chr5A 92.500 80 6 0 806 885 510463908 510463987 1.040000e-21 115
27 TraesCS1B01G179100 chr6D 92.405 79 5 1 806 884 306137321 306137398 1.350000e-20 111
28 TraesCS1B01G179100 chr7A 88.889 81 9 0 3991 4071 181698101 181698181 2.930000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G179100 chr1B 324777723 324782317 4594 False 2244.75 8486 98.0380 1 4595 4 chr1B.!!$F1 4594
1 TraesCS1B01G179100 chr1A 292878759 292882690 3931 True 2853.50 5581 93.1565 1 4150 2 chr1A.!!$R1 4149
2 TraesCS1B01G179100 chr1D 225059099 225062192 3093 False 2325.00 3408 93.0445 831 3949 2 chr1D.!!$F3 3118
3 TraesCS1B01G179100 chr1D 225003001 225003558 557 False 390.00 390 80.9270 1 506 1 chr1D.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
512 568 0.035630 CAAGCAGAGTAGGCCAAGCT 60.036 55.0 5.01 1.18 0.0 3.74 F
2121 2193 0.250467 ATTGACTGACTGCACCGCTT 60.250 50.0 0.00 0.00 0.0 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2431 2506 1.598601 GGCAACTGGCAACACAAAATG 59.401 47.619 0.00 0.0 46.17 2.32 R
4039 4147 0.028902 GCCTAAACCGGCGCTAAATG 59.971 55.000 7.64 0.0 40.79 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 8.073467 ACAAGAGAACTAAGAATCTTCTAGGG 57.927 38.462 0.00 0.00 36.28 3.53
100 101 8.431910 TTCTAGGGTAATAATCAGTGTATCCC 57.568 38.462 0.00 0.00 0.00 3.85
126 127 5.358298 AAAGTTGGTAATGACTTCTTCGC 57.642 39.130 0.00 0.00 35.17 4.70
157 158 7.960738 TCGTCGAAAGAATCAAATTGATAAACC 59.039 33.333 9.09 0.01 45.01 3.27
173 200 3.409026 AAACCTGAGTGTGTGGATCTC 57.591 47.619 0.00 0.00 0.00 2.75
187 214 2.548057 TGGATCTCGCAACAAAGTTCAC 59.452 45.455 0.00 0.00 0.00 3.18
211 238 8.276325 CACTCGGAAATAAAAAGATATTCCTCG 58.724 37.037 0.00 0.00 0.00 4.63
217 244 8.589701 AAATAAAAAGATATTCCTCGGTTGGT 57.410 30.769 0.00 0.00 0.00 3.67
221 248 2.103263 AGATATTCCTCGGTTGGTGCTC 59.897 50.000 0.00 0.00 0.00 4.26
239 266 0.454600 TCGAGTACCATGCGAGGAAC 59.545 55.000 0.69 0.00 0.00 3.62
266 293 4.647611 ACCATGAACTTGTAAATCGGTCA 58.352 39.130 0.00 0.00 0.00 4.02
275 302 2.032722 TGTAAATCGGTCACACAAACGC 60.033 45.455 0.00 0.00 0.00 4.84
326 353 6.752285 TTCCATCAGATGATATGAACTCCA 57.248 37.500 12.41 0.00 32.63 3.86
441 497 9.058424 GCAAAAATTACCTGTCGAATAGTAAAC 57.942 33.333 6.53 0.00 0.00 2.01
478 534 7.272037 ACTTTGTTCGAAAAGGTCACATATT 57.728 32.000 12.87 0.00 40.74 1.28
493 549 4.808895 TCACATATTCCTATGACACGCAAC 59.191 41.667 0.00 0.00 38.49 4.17
506 562 0.951040 ACGCAACAAGCAGAGTAGGC 60.951 55.000 0.00 0.00 46.13 3.93
512 568 0.035630 CAAGCAGAGTAGGCCAAGCT 60.036 55.000 5.01 1.18 0.00 3.74
516 572 0.321919 CAGAGTAGGCCAAGCTGCAA 60.322 55.000 5.01 0.00 0.00 4.08
523 579 0.893447 GGCCAAGCTGCAAAGAAGAT 59.107 50.000 0.00 0.00 0.00 2.40
538 594 7.039152 TGCAAAGAAGATAAATTGTGGGAATGA 60.039 33.333 0.00 0.00 0.00 2.57
541 597 8.421249 AAGAAGATAAATTGTGGGAATGACAA 57.579 30.769 0.00 0.00 37.70 3.18
544 600 7.161773 AGATAAATTGTGGGAATGACAAGTG 57.838 36.000 0.00 0.00 36.77 3.16
547 603 4.853924 ATTGTGGGAATGACAAGTGAAC 57.146 40.909 0.00 0.00 36.77 3.18
553 609 4.338118 TGGGAATGACAAGTGAACAGAAAC 59.662 41.667 0.00 0.00 0.00 2.78
562 618 5.470098 ACAAGTGAACAGAAACGCTATGATT 59.530 36.000 0.00 0.00 0.00 2.57
573 629 9.638300 CAGAAACGCTATGATTAAAGAACATAC 57.362 33.333 0.00 0.00 0.00 2.39
574 630 9.378551 AGAAACGCTATGATTAAAGAACATACA 57.621 29.630 0.00 0.00 0.00 2.29
578 634 9.547753 ACGCTATGATTAAAGAACATACAAGAT 57.452 29.630 0.00 0.00 0.00 2.40
596 652 7.383102 ACAAGATGTTGTAAAGCTTCATAGG 57.617 36.000 6.42 0.00 45.48 2.57
630 686 5.059161 TGAAAATATTCAGATGGAGGCTCG 58.941 41.667 8.69 0.00 40.59 5.03
634 690 0.685785 TTCAGATGGAGGCTCGCTCT 60.686 55.000 8.69 9.84 0.00 4.09
640 696 2.105930 GAGGCTCGCTCTCGCAAT 59.894 61.111 0.00 0.00 35.30 3.56
651 707 3.002656 CGCTCTCGCAATGACCATTAAAT 59.997 43.478 0.00 0.00 35.30 1.40
652 708 4.496341 CGCTCTCGCAATGACCATTAAATT 60.496 41.667 0.00 0.00 35.30 1.82
653 709 5.343249 GCTCTCGCAATGACCATTAAATTT 58.657 37.500 0.00 0.00 35.78 1.82
654 710 5.807011 GCTCTCGCAATGACCATTAAATTTT 59.193 36.000 0.00 0.00 35.78 1.82
655 711 6.311200 GCTCTCGCAATGACCATTAAATTTTT 59.689 34.615 0.00 0.00 35.78 1.94
733 789 7.412137 AAAAATACAAATTGTTGCAGAGCTC 57.588 32.000 5.27 5.27 38.39 4.09
734 790 5.710513 AATACAAATTGTTGCAGAGCTCA 57.289 34.783 17.77 0.00 38.39 4.26
742 798 2.615447 TGTTGCAGAGCTCAAAGTGAAG 59.385 45.455 17.77 0.00 0.00 3.02
744 800 0.520847 GCAGAGCTCAAAGTGAAGGC 59.479 55.000 17.77 1.40 0.00 4.35
754 810 3.069443 TCAAAGTGAAGGCCAAATTGTCC 59.931 43.478 5.01 0.00 0.00 4.02
755 811 2.380064 AGTGAAGGCCAAATTGTCCA 57.620 45.000 5.01 0.00 0.00 4.02
756 812 1.963515 AGTGAAGGCCAAATTGTCCAC 59.036 47.619 5.01 0.67 0.00 4.02
757 813 1.963515 GTGAAGGCCAAATTGTCCACT 59.036 47.619 5.01 0.00 0.00 4.00
758 814 2.029918 GTGAAGGCCAAATTGTCCACTC 60.030 50.000 5.01 0.00 0.00 3.51
760 816 0.482446 AGGCCAAATTGTCCACTCCA 59.518 50.000 5.01 0.00 0.00 3.86
763 819 2.354003 GGCCAAATTGTCCACTCCATTG 60.354 50.000 0.00 0.00 0.00 2.82
764 820 2.354003 GCCAAATTGTCCACTCCATTGG 60.354 50.000 0.00 0.00 39.02 3.16
788 845 7.120579 TGGAAAATAGTCGAGCACATACAAAAT 59.879 33.333 0.00 0.00 0.00 1.82
789 846 7.968405 GGAAAATAGTCGAGCACATACAAAATT 59.032 33.333 0.00 0.00 0.00 1.82
896 953 2.477863 GCGAATTTGCCTGTGGTACATC 60.478 50.000 6.38 0.00 44.52 3.06
897 954 2.223021 CGAATTTGCCTGTGGTACATCG 60.223 50.000 0.00 0.00 44.52 3.84
901 958 2.779755 TGCCTGTGGTACATCGAAAT 57.220 45.000 0.00 0.00 44.52 2.17
907 964 6.824196 TGCCTGTGGTACATCGAAATTTTATA 59.176 34.615 0.00 0.00 44.52 0.98
928 985 9.944663 TTTATATCTTTATTTGAACCACGATGC 57.055 29.630 0.00 0.00 0.00 3.91
1230 1287 2.363018 CCACGAGCTCTCCCTCCA 60.363 66.667 12.85 0.00 0.00 3.86
1260 1325 2.595655 GGCTCGCCCAACCCTAAT 59.404 61.111 0.00 0.00 0.00 1.73
1474 1539 2.816204 TGCACATGATTGGGTTTGTG 57.184 45.000 0.00 0.00 41.80 3.33
1479 1544 4.675510 CACATGATTGGGTTTGTGATAGC 58.324 43.478 0.00 0.00 41.50 2.97
1486 1551 4.634012 TGGGTTTGTGATAGCTTACAGT 57.366 40.909 0.00 0.00 0.00 3.55
1524 1592 5.231779 CACTACTTCAGCGAATCTCTCAATG 59.768 44.000 0.00 0.00 0.00 2.82
1606 1676 5.061179 ACATAGTATTGGTCGGTTATTGGC 58.939 41.667 0.00 0.00 0.00 4.52
1644 1714 3.569701 AGGAAAAACACACGATCAGCAAT 59.430 39.130 0.00 0.00 0.00 3.56
1676 1746 4.666512 AGTTGCCATGAAAGTTCCACTAT 58.333 39.130 0.00 0.00 0.00 2.12
1687 1757 6.491745 TGAAAGTTCCACTATTTATTGCACCA 59.508 34.615 0.00 0.00 0.00 4.17
1709 1779 2.336945 ATCATCCAAGCGCTGATTGA 57.663 45.000 12.58 12.82 29.71 2.57
1736 1806 6.353323 TGTCTTGTTCCATGTAAAGTTCAGA 58.647 36.000 0.00 0.00 0.00 3.27
1747 1817 6.431198 TGTAAAGTTCAGACTTGTTTGGTC 57.569 37.500 0.00 0.00 45.18 4.02
1761 1831 6.833933 ACTTGTTTGGTCAGGAGAAGTTAATT 59.166 34.615 0.00 0.00 0.00 1.40
1785 1855 3.971305 TGAAGGTCTCCCAACTTGAACTA 59.029 43.478 0.00 0.00 0.00 2.24
1892 1964 3.460825 TCCTGGCCTGTAATTTAGGTCT 58.539 45.455 3.32 0.00 40.60 3.85
2121 2193 0.250467 ATTGACTGACTGCACCGCTT 60.250 50.000 0.00 0.00 0.00 4.68
2162 2236 3.181476 GCACAACTGGAGGACAAATGTTT 60.181 43.478 0.00 0.00 0.00 2.83
2163 2237 4.680440 GCACAACTGGAGGACAAATGTTTT 60.680 41.667 0.00 0.00 0.00 2.43
2431 2506 5.625311 CCGACAGCATTCTTTGTAAAAGTTC 59.375 40.000 0.05 0.00 0.00 3.01
2435 2510 8.947055 ACAGCATTCTTTGTAAAAGTTCATTT 57.053 26.923 0.05 0.00 0.00 2.32
2477 2552 5.397447 CCAGATTAACCTTAGGCACCATGTA 60.397 44.000 0.00 0.00 0.00 2.29
2514 2589 4.641396 TGGGAAGATATAATTCAGTGCCG 58.359 43.478 3.33 0.00 0.00 5.69
2742 2819 8.995027 TCCCTTAAGCATGTTACAAATATGAT 57.005 30.769 0.00 0.00 32.37 2.45
2793 2870 5.619981 GCATATTTTGGTCAGTCACAAGGTC 60.620 44.000 0.00 0.00 0.00 3.85
2831 2909 4.345547 TCTGGTGGAATGTAGTACACAACA 59.654 41.667 4.80 7.48 41.55 3.33
2833 2911 5.626142 TGGTGGAATGTAGTACACAACATT 58.374 37.500 16.50 16.50 46.29 2.71
2887 2965 9.153721 CATTTTGCCAGAAGCTTTTATCATTTA 57.846 29.630 0.00 0.00 44.23 1.40
2892 2970 6.969473 GCCAGAAGCTTTTATCATTTACAGTC 59.031 38.462 0.00 0.00 38.99 3.51
2941 3019 6.624710 TTTTATTGTGGCGAATTTTCATCG 57.375 33.333 0.00 0.00 42.99 3.84
3049 3127 5.390251 CGATAGCCACATAAATTGCTAGCTG 60.390 44.000 17.23 7.07 39.78 4.24
3087 3165 5.220931 GGAAGGCACAACTTATATTGAGCTG 60.221 44.000 0.00 0.00 43.28 4.24
3120 3198 0.036010 ATCCGCCTCCACTGAACTTG 60.036 55.000 0.00 0.00 0.00 3.16
3142 3220 3.318017 ACACTCGGCGCTAAATATGATC 58.682 45.455 7.64 0.00 0.00 2.92
3164 3242 8.550376 TGATCATGTGTTATAATTCATGTGTCG 58.450 33.333 21.22 6.70 38.78 4.35
3181 3259 2.832129 TGTCGGAGCTATTCCTCAACTT 59.168 45.455 0.00 0.00 44.41 2.66
3207 3285 3.545703 GCACATACCTAACCTGAATGCT 58.454 45.455 0.00 0.00 0.00 3.79
3219 3313 5.876651 ACCTGAATGCTGTACAGATGATA 57.123 39.130 27.08 8.06 34.07 2.15
3364 3466 1.114722 CCTGCCCCTTGCTTTGTTGA 61.115 55.000 0.00 0.00 42.00 3.18
3376 3478 2.677765 TTTGTTGAAGCGCCGGGGTA 62.678 55.000 20.83 1.63 0.00 3.69
3442 3544 0.737715 GTTTTGGCCGTGTGTGCAAA 60.738 50.000 0.00 0.00 0.00 3.68
3443 3545 0.176680 TTTTGGCCGTGTGTGCAAAT 59.823 45.000 0.00 0.00 0.00 2.32
3491 3593 2.286713 CCTGCTCTATCGTCAGACTTCG 60.287 54.545 0.00 0.00 0.00 3.79
3513 3615 4.617530 CGTCCTCGAGTAATTTGGAACTCA 60.618 45.833 12.31 0.00 41.83 3.41
3545 3649 4.002982 GTGTGTCTTGGATGCACAATCTA 58.997 43.478 0.00 0.00 43.51 1.98
3548 3652 4.002982 TGTCTTGGATGCACAATCTACAC 58.997 43.478 0.00 0.00 35.43 2.90
3553 3657 6.595326 TCTTGGATGCACAATCTACACTTTAG 59.405 38.462 0.00 0.00 35.43 1.85
3570 3674 6.449698 CACTTTAGTGGCTTTGACAATCAAT 58.550 36.000 1.88 0.00 42.10 2.57
3611 3715 3.084039 TGATGTCTGGATGCTTGGTTTC 58.916 45.455 0.00 0.00 0.00 2.78
3618 3722 2.690497 TGGATGCTTGGTTTCGTTTTCA 59.310 40.909 0.00 0.00 0.00 2.69
3725 3831 4.075963 TGTGTACCACTAAGTTGGGAAC 57.924 45.455 0.00 0.00 41.49 3.62
3741 3847 5.523438 TGGGAACGTTAAAGCAAAAATCT 57.477 34.783 0.00 0.00 0.00 2.40
3767 3873 9.158233 TCTGGTTACTATGTTTACAAATACAGC 57.842 33.333 0.00 0.00 0.00 4.40
3793 3899 2.480419 GGAAGAACCACATCGACACAAG 59.520 50.000 0.00 0.00 38.79 3.16
3815 3923 6.266131 AGTTCTTTCCATGGATTGCCTATA 57.734 37.500 17.06 0.00 34.31 1.31
3871 3979 4.703897 TGACAACTAAAACCTCCAGTCAG 58.296 43.478 0.00 0.00 31.81 3.51
3872 3980 4.407621 TGACAACTAAAACCTCCAGTCAGA 59.592 41.667 0.00 0.00 31.81 3.27
3873 3981 4.704965 ACAACTAAAACCTCCAGTCAGAC 58.295 43.478 0.00 0.00 0.00 3.51
3874 3982 4.065789 CAACTAAAACCTCCAGTCAGACC 58.934 47.826 0.00 0.00 0.00 3.85
3875 3983 2.638363 ACTAAAACCTCCAGTCAGACCC 59.362 50.000 0.00 0.00 0.00 4.46
3876 3984 1.518367 AAAACCTCCAGTCAGACCCA 58.482 50.000 0.00 0.00 0.00 4.51
3877 3985 1.747444 AAACCTCCAGTCAGACCCAT 58.253 50.000 0.00 0.00 0.00 4.00
3878 3986 1.280457 AACCTCCAGTCAGACCCATC 58.720 55.000 0.00 0.00 0.00 3.51
3879 3987 0.117140 ACCTCCAGTCAGACCCATCA 59.883 55.000 0.00 0.00 0.00 3.07
3880 3988 1.274069 ACCTCCAGTCAGACCCATCAT 60.274 52.381 0.00 0.00 0.00 2.45
3881 3989 1.140452 CCTCCAGTCAGACCCATCATG 59.860 57.143 0.00 0.00 0.00 3.07
3882 3990 2.113807 CTCCAGTCAGACCCATCATGA 58.886 52.381 0.00 0.00 0.00 3.07
3883 3991 2.704596 CTCCAGTCAGACCCATCATGAT 59.295 50.000 1.18 1.18 0.00 2.45
3884 3992 2.436911 TCCAGTCAGACCCATCATGATG 59.563 50.000 25.97 25.97 38.51 3.07
3885 3993 2.172082 CCAGTCAGACCCATCATGATGT 59.828 50.000 29.23 15.53 37.11 3.06
3886 3994 3.203716 CAGTCAGACCCATCATGATGTG 58.796 50.000 29.23 22.85 37.11 3.21
3887 3995 1.945394 GTCAGACCCATCATGATGTGC 59.055 52.381 29.23 19.15 37.11 4.57
3888 3996 1.134007 TCAGACCCATCATGATGTGCC 60.134 52.381 29.23 14.76 37.11 5.01
3889 3997 0.184451 AGACCCATCATGATGTGCCC 59.816 55.000 29.23 16.21 37.11 5.36
3890 3998 0.106569 GACCCATCATGATGTGCCCA 60.107 55.000 29.23 0.00 37.11 5.36
3891 3999 0.106369 ACCCATCATGATGTGCCCAG 60.106 55.000 29.23 15.48 37.11 4.45
3892 4000 1.461091 CCCATCATGATGTGCCCAGC 61.461 60.000 29.23 0.00 37.11 4.85
3893 4001 1.652563 CATCATGATGTGCCCAGCG 59.347 57.895 24.87 0.00 34.23 5.18
3894 4002 2.191513 ATCATGATGTGCCCAGCGC 61.192 57.895 7.59 0.00 39.75 5.92
3895 4003 2.619941 ATCATGATGTGCCCAGCGCT 62.620 55.000 2.64 2.64 40.03 5.92
3896 4004 2.827190 ATGATGTGCCCAGCGCTG 60.827 61.111 30.52 30.52 40.03 5.18
3918 4026 3.406764 GAGTTCATCCATCATACCCTGC 58.593 50.000 0.00 0.00 0.00 4.85
3919 4027 2.779430 AGTTCATCCATCATACCCTGCA 59.221 45.455 0.00 0.00 0.00 4.41
3920 4028 3.144506 GTTCATCCATCATACCCTGCAG 58.855 50.000 6.78 6.78 0.00 4.41
3921 4029 2.693210 TCATCCATCATACCCTGCAGA 58.307 47.619 17.39 0.00 0.00 4.26
3922 4030 3.047857 TCATCCATCATACCCTGCAGAA 58.952 45.455 17.39 0.00 0.00 3.02
3923 4031 3.459227 TCATCCATCATACCCTGCAGAAA 59.541 43.478 17.39 0.00 0.00 2.52
3924 4032 4.105217 TCATCCATCATACCCTGCAGAAAT 59.895 41.667 17.39 2.18 0.00 2.17
3925 4033 3.824133 TCCATCATACCCTGCAGAAATG 58.176 45.455 17.39 14.96 0.00 2.32
3926 4034 2.295349 CCATCATACCCTGCAGAAATGC 59.705 50.000 17.39 0.00 0.00 3.56
3927 4035 3.220110 CATCATACCCTGCAGAAATGCT 58.780 45.455 17.39 4.46 35.49 3.79
3928 4036 2.923121 TCATACCCTGCAGAAATGCTC 58.077 47.619 17.39 0.00 35.49 4.26
3929 4037 1.600957 CATACCCTGCAGAAATGCTCG 59.399 52.381 17.39 0.00 35.49 5.03
3930 4038 0.901827 TACCCTGCAGAAATGCTCGA 59.098 50.000 17.39 0.00 35.49 4.04
3931 4039 0.254178 ACCCTGCAGAAATGCTCGAT 59.746 50.000 17.39 0.00 35.49 3.59
3932 4040 0.661552 CCCTGCAGAAATGCTCGATG 59.338 55.000 17.39 0.00 35.49 3.84
3933 4041 0.661552 CCTGCAGAAATGCTCGATGG 59.338 55.000 17.39 0.00 35.49 3.51
3934 4042 1.376543 CTGCAGAAATGCTCGATGGT 58.623 50.000 8.42 0.00 35.49 3.55
3935 4043 1.741706 CTGCAGAAATGCTCGATGGTT 59.258 47.619 8.42 0.00 35.49 3.67
3936 4044 2.161855 TGCAGAAATGCTCGATGGTTT 58.838 42.857 1.53 0.00 35.49 3.27
3937 4045 2.557924 TGCAGAAATGCTCGATGGTTTT 59.442 40.909 1.53 0.00 35.49 2.43
3938 4046 2.919229 GCAGAAATGCTCGATGGTTTTG 59.081 45.455 0.00 0.00 0.00 2.44
3939 4047 3.366273 GCAGAAATGCTCGATGGTTTTGA 60.366 43.478 0.00 0.00 0.00 2.69
3940 4048 4.409570 CAGAAATGCTCGATGGTTTTGAG 58.590 43.478 0.00 0.00 38.70 3.02
3941 4049 3.441572 AGAAATGCTCGATGGTTTTGAGG 59.558 43.478 0.00 0.00 36.48 3.86
3942 4050 2.496899 ATGCTCGATGGTTTTGAGGT 57.503 45.000 0.00 0.00 36.48 3.85
3943 4051 3.627395 ATGCTCGATGGTTTTGAGGTA 57.373 42.857 0.00 0.00 36.48 3.08
3944 4052 2.972625 TGCTCGATGGTTTTGAGGTAG 58.027 47.619 0.00 0.00 36.48 3.18
3945 4053 2.301870 TGCTCGATGGTTTTGAGGTAGT 59.698 45.455 0.00 0.00 36.48 2.73
3946 4054 3.244422 TGCTCGATGGTTTTGAGGTAGTT 60.244 43.478 0.00 0.00 36.48 2.24
3947 4055 4.020928 TGCTCGATGGTTTTGAGGTAGTTA 60.021 41.667 0.00 0.00 36.48 2.24
3948 4056 4.933400 GCTCGATGGTTTTGAGGTAGTTAA 59.067 41.667 0.00 0.00 36.48 2.01
3949 4057 5.063564 GCTCGATGGTTTTGAGGTAGTTAAG 59.936 44.000 0.00 0.00 36.48 1.85
3950 4058 6.349243 TCGATGGTTTTGAGGTAGTTAAGA 57.651 37.500 0.00 0.00 0.00 2.10
3951 4059 6.395629 TCGATGGTTTTGAGGTAGTTAAGAG 58.604 40.000 0.00 0.00 0.00 2.85
3952 4060 5.063564 CGATGGTTTTGAGGTAGTTAAGAGC 59.936 44.000 0.00 0.00 0.00 4.09
3953 4061 5.298989 TGGTTTTGAGGTAGTTAAGAGCA 57.701 39.130 0.00 0.00 0.00 4.26
3954 4062 5.876357 TGGTTTTGAGGTAGTTAAGAGCAT 58.124 37.500 0.00 0.00 0.00 3.79
3955 4063 5.938125 TGGTTTTGAGGTAGTTAAGAGCATC 59.062 40.000 0.00 0.00 0.00 3.91
3966 4074 2.581354 GAGCATCTCCAGCCGTGT 59.419 61.111 0.00 0.00 0.00 4.49
3967 4075 1.520342 GAGCATCTCCAGCCGTGTC 60.520 63.158 0.00 0.00 0.00 3.67
3968 4076 2.512515 GCATCTCCAGCCGTGTCC 60.513 66.667 0.00 0.00 0.00 4.02
3969 4077 2.187946 CATCTCCAGCCGTGTCCC 59.812 66.667 0.00 0.00 0.00 4.46
3970 4078 3.083997 ATCTCCAGCCGTGTCCCC 61.084 66.667 0.00 0.00 0.00 4.81
3984 4092 4.760047 CCCCGACACGCTCCCAAG 62.760 72.222 0.00 0.00 0.00 3.61
3985 4093 4.760047 CCCGACACGCTCCCAAGG 62.760 72.222 0.00 0.00 0.00 3.61
3986 4094 4.003788 CCGACACGCTCCCAAGGT 62.004 66.667 0.00 0.00 0.00 3.50
3987 4095 2.738521 CGACACGCTCCCAAGGTG 60.739 66.667 0.00 0.00 37.67 4.00
3988 4096 2.741092 GACACGCTCCCAAGGTGA 59.259 61.111 0.00 0.00 35.68 4.02
3989 4097 1.296715 GACACGCTCCCAAGGTGAT 59.703 57.895 0.00 0.00 35.68 3.06
3990 4098 0.321653 GACACGCTCCCAAGGTGATT 60.322 55.000 0.00 0.00 35.68 2.57
3991 4099 0.110486 ACACGCTCCCAAGGTGATTT 59.890 50.000 0.00 0.00 35.68 2.17
3992 4100 1.247567 CACGCTCCCAAGGTGATTTT 58.752 50.000 0.00 0.00 33.58 1.82
3993 4101 1.613437 CACGCTCCCAAGGTGATTTTT 59.387 47.619 0.00 0.00 33.58 1.94
4008 4116 1.655329 TTTTTAGTGTTGGCGGCCG 59.345 52.632 24.05 24.05 0.00 6.13
4009 4117 0.818445 TTTTTAGTGTTGGCGGCCGA 60.818 50.000 33.48 10.26 0.00 5.54
4010 4118 0.818445 TTTTAGTGTTGGCGGCCGAA 60.818 50.000 33.48 13.24 0.00 4.30
4011 4119 0.818445 TTTAGTGTTGGCGGCCGAAA 60.818 50.000 33.48 20.01 0.00 3.46
4012 4120 0.818445 TTAGTGTTGGCGGCCGAAAA 60.818 50.000 33.48 19.59 0.00 2.29
4013 4121 0.606944 TAGTGTTGGCGGCCGAAAAT 60.607 50.000 33.48 7.69 0.00 1.82
4014 4122 1.443702 GTGTTGGCGGCCGAAAATC 60.444 57.895 33.48 10.82 0.00 2.17
4015 4123 2.202427 GTTGGCGGCCGAAAATCG 60.202 61.111 33.48 0.00 40.07 3.34
4016 4124 2.358860 TTGGCGGCCGAAAATCGA 60.359 55.556 33.48 4.49 43.74 3.59
4017 4125 2.682876 TTGGCGGCCGAAAATCGAC 61.683 57.895 33.48 8.16 43.74 4.20
4018 4126 3.872728 GGCGGCCGAAAATCGACC 61.873 66.667 33.48 14.56 43.74 4.79
4019 4127 3.872728 GCGGCCGAAAATCGACCC 61.873 66.667 33.48 2.06 39.34 4.46
4020 4128 2.435234 CGGCCGAAAATCGACCCA 60.435 61.111 24.07 0.00 39.34 4.51
4021 4129 2.036006 CGGCCGAAAATCGACCCAA 61.036 57.895 24.07 0.00 39.34 4.12
4022 4130 1.373590 CGGCCGAAAATCGACCCAAT 61.374 55.000 24.07 0.00 39.34 3.16
4023 4131 0.380733 GGCCGAAAATCGACCCAATC 59.619 55.000 0.58 0.00 43.74 2.67
4035 4143 4.794648 CCAATCGCGCCCCCAAGA 62.795 66.667 0.00 0.00 0.00 3.02
4036 4144 2.516930 CAATCGCGCCCCCAAGAT 60.517 61.111 0.00 0.00 0.00 2.40
4037 4145 2.203209 AATCGCGCCCCCAAGATC 60.203 61.111 0.00 0.00 0.00 2.75
4038 4146 2.746375 AATCGCGCCCCCAAGATCT 61.746 57.895 0.00 0.00 0.00 2.75
4039 4147 2.666596 AATCGCGCCCCCAAGATCTC 62.667 60.000 0.00 0.00 0.00 2.75
4040 4148 4.161295 CGCGCCCCCAAGATCTCA 62.161 66.667 0.00 0.00 0.00 3.27
4041 4149 2.512896 GCGCCCCCAAGATCTCAT 59.487 61.111 0.00 0.00 0.00 2.90
4042 4150 1.152881 GCGCCCCCAAGATCTCATT 60.153 57.895 0.00 0.00 0.00 2.57
4043 4151 0.753111 GCGCCCCCAAGATCTCATTT 60.753 55.000 0.00 0.00 0.00 2.32
4044 4152 1.476833 GCGCCCCCAAGATCTCATTTA 60.477 52.381 0.00 0.00 0.00 1.40
4045 4153 2.498167 CGCCCCCAAGATCTCATTTAG 58.502 52.381 0.00 0.00 0.00 1.85
4046 4154 2.234143 GCCCCCAAGATCTCATTTAGC 58.766 52.381 0.00 0.00 0.00 3.09
4047 4155 2.498167 CCCCCAAGATCTCATTTAGCG 58.502 52.381 0.00 0.00 0.00 4.26
4048 4156 1.876156 CCCCAAGATCTCATTTAGCGC 59.124 52.381 0.00 0.00 0.00 5.92
4049 4157 1.876156 CCCAAGATCTCATTTAGCGCC 59.124 52.381 2.29 0.00 0.00 6.53
4050 4158 1.528586 CCAAGATCTCATTTAGCGCCG 59.471 52.381 2.29 0.00 0.00 6.46
4051 4159 1.528586 CAAGATCTCATTTAGCGCCGG 59.471 52.381 2.29 0.00 0.00 6.13
4052 4160 0.753262 AGATCTCATTTAGCGCCGGT 59.247 50.000 2.29 0.00 0.00 5.28
4053 4161 1.139058 AGATCTCATTTAGCGCCGGTT 59.861 47.619 2.29 0.00 0.00 4.44
4054 4162 1.940613 GATCTCATTTAGCGCCGGTTT 59.059 47.619 2.29 0.00 0.00 3.27
4055 4163 2.676632 TCTCATTTAGCGCCGGTTTA 57.323 45.000 2.29 0.00 0.00 2.01
4056 4164 2.546778 TCTCATTTAGCGCCGGTTTAG 58.453 47.619 2.29 0.00 0.00 1.85
4057 4165 1.597663 CTCATTTAGCGCCGGTTTAGG 59.402 52.381 2.29 0.00 0.00 2.69
4070 4178 3.416119 GGTTTAGGCCGAATTAACAGC 57.584 47.619 0.00 0.00 0.00 4.40
4071 4179 2.098607 GGTTTAGGCCGAATTAACAGCC 59.901 50.000 0.00 0.00 46.13 4.85
4086 4194 1.133884 ACAGCCAGACCCATCATGATG 60.134 52.381 25.97 25.97 38.51 3.07
4131 4239 1.600957 CATACCCTGCAGAAATGCTCG 59.399 52.381 17.39 0.00 35.49 5.03
4144 4252 2.496899 ATGCTCGATGGTTTTGAGGT 57.503 45.000 0.00 0.00 36.48 3.85
4151 4259 5.063564 GCTCGATGGTTTTGAGGTAGTTAAG 59.936 44.000 0.00 0.00 36.48 1.85
4152 4260 6.349243 TCGATGGTTTTGAGGTAGTTAAGA 57.651 37.500 0.00 0.00 0.00 2.10
4153 4261 6.395629 TCGATGGTTTTGAGGTAGTTAAGAG 58.604 40.000 0.00 0.00 0.00 2.85
4154 4262 5.063564 CGATGGTTTTGAGGTAGTTAAGAGC 59.936 44.000 0.00 0.00 0.00 4.09
4155 4263 5.298989 TGGTTTTGAGGTAGTTAAGAGCA 57.701 39.130 0.00 0.00 0.00 4.26
4156 4264 5.876357 TGGTTTTGAGGTAGTTAAGAGCAT 58.124 37.500 0.00 0.00 0.00 3.79
4157 4265 5.938125 TGGTTTTGAGGTAGTTAAGAGCATC 59.062 40.000 0.00 0.00 0.00 3.91
4168 4276 2.581354 GAGCATCTCCAGCCGTGT 59.419 61.111 0.00 0.00 0.00 4.49
4169 4277 1.520342 GAGCATCTCCAGCCGTGTC 60.520 63.158 0.00 0.00 0.00 3.67
4170 4278 2.512515 GCATCTCCAGCCGTGTCC 60.513 66.667 0.00 0.00 0.00 4.02
4171 4279 2.187946 CATCTCCAGCCGTGTCCC 59.812 66.667 0.00 0.00 0.00 4.46
4172 4280 3.083997 ATCTCCAGCCGTGTCCCC 61.084 66.667 0.00 0.00 0.00 4.81
4190 4298 3.872728 GGCGGCCGAAAATCGACC 61.873 66.667 33.48 14.56 43.74 4.79
4191 4299 3.872728 GCGGCCGAAAATCGACCC 61.873 66.667 33.48 2.06 39.34 4.46
4192 4300 2.435234 CGGCCGAAAATCGACCCA 60.435 61.111 24.07 0.00 39.34 4.51
4193 4301 2.461110 CGGCCGAAAATCGACCCAG 61.461 63.158 24.07 0.00 39.34 4.45
4194 4302 1.376812 GGCCGAAAATCGACCCAGT 60.377 57.895 0.58 0.00 43.74 4.00
4195 4303 1.366854 GGCCGAAAATCGACCCAGTC 61.367 60.000 0.58 0.00 43.74 3.51
4205 4313 4.974438 ACCCAGTCGAGCCCCCAA 62.974 66.667 0.00 0.00 0.00 4.12
4206 4314 4.101448 CCCAGTCGAGCCCCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
4207 4315 3.003173 CCAGTCGAGCCCCCAAGA 61.003 66.667 0.00 0.00 0.00 3.02
4208 4316 2.370445 CCAGTCGAGCCCCCAAGAT 61.370 63.158 0.00 0.00 0.00 2.40
4209 4317 1.144936 CAGTCGAGCCCCCAAGATC 59.855 63.158 0.00 0.00 0.00 2.75
4210 4318 1.002274 AGTCGAGCCCCCAAGATCT 59.998 57.895 0.00 0.00 0.00 2.75
4211 4319 1.045911 AGTCGAGCCCCCAAGATCTC 61.046 60.000 0.00 0.00 0.00 2.75
4212 4320 1.001631 TCGAGCCCCCAAGATCTCA 59.998 57.895 0.00 0.00 0.00 3.27
4213 4321 0.399091 TCGAGCCCCCAAGATCTCAT 60.399 55.000 0.00 0.00 0.00 2.90
4214 4322 0.471617 CGAGCCCCCAAGATCTCATT 59.528 55.000 0.00 0.00 0.00 2.57
4215 4323 1.133976 CGAGCCCCCAAGATCTCATTT 60.134 52.381 0.00 0.00 0.00 2.32
4216 4324 2.104792 CGAGCCCCCAAGATCTCATTTA 59.895 50.000 0.00 0.00 0.00 1.40
4217 4325 3.749226 GAGCCCCCAAGATCTCATTTAG 58.251 50.000 0.00 0.00 0.00 1.85
4218 4326 2.158549 AGCCCCCAAGATCTCATTTAGC 60.159 50.000 0.00 0.00 0.00 3.09
4219 4327 2.498167 CCCCCAAGATCTCATTTAGCG 58.502 52.381 0.00 0.00 0.00 4.26
4220 4328 1.876156 CCCCAAGATCTCATTTAGCGC 59.124 52.381 0.00 0.00 0.00 5.92
4221 4329 1.876156 CCCAAGATCTCATTTAGCGCC 59.124 52.381 2.29 0.00 0.00 6.53
4222 4330 1.528586 CCAAGATCTCATTTAGCGCCG 59.471 52.381 2.29 0.00 0.00 6.46
4223 4331 1.528586 CAAGATCTCATTTAGCGCCGG 59.471 52.381 2.29 0.00 0.00 6.13
4224 4332 0.753262 AGATCTCATTTAGCGCCGGT 59.247 50.000 2.29 0.00 0.00 5.28
4225 4333 1.139058 AGATCTCATTTAGCGCCGGTT 59.861 47.619 2.29 0.00 0.00 4.44
4226 4334 1.940613 GATCTCATTTAGCGCCGGTTT 59.059 47.619 2.29 0.00 0.00 3.27
4227 4335 2.676632 TCTCATTTAGCGCCGGTTTA 57.323 45.000 2.29 0.00 0.00 2.01
4228 4336 2.546778 TCTCATTTAGCGCCGGTTTAG 58.453 47.619 2.29 0.00 0.00 1.85
4229 4337 1.597663 CTCATTTAGCGCCGGTTTAGG 59.402 52.381 2.29 0.00 0.00 2.69
4243 4351 4.761235 GGTTTAGGCCGAATTAATAGCC 57.239 45.455 13.60 13.60 46.13 3.93
4247 4355 0.517316 GGCCGAATTAATAGCCAGCG 59.483 55.000 15.64 2.81 45.07 5.18
4248 4356 1.508632 GCCGAATTAATAGCCAGCGA 58.491 50.000 0.00 0.00 0.00 4.93
4249 4357 1.194772 GCCGAATTAATAGCCAGCGAC 59.805 52.381 0.00 0.00 0.00 5.19
4250 4358 1.798813 CCGAATTAATAGCCAGCGACC 59.201 52.381 0.00 0.00 0.00 4.79
4251 4359 1.798813 CGAATTAATAGCCAGCGACCC 59.201 52.381 0.00 0.00 0.00 4.46
4252 4360 2.152016 GAATTAATAGCCAGCGACCCC 58.848 52.381 0.00 0.00 0.00 4.95
4253 4361 0.034896 ATTAATAGCCAGCGACCCCG 59.965 55.000 0.00 0.00 39.16 5.73
4254 4362 1.044231 TTAATAGCCAGCGACCCCGA 61.044 55.000 0.00 0.00 38.22 5.14
4255 4363 1.461091 TAATAGCCAGCGACCCCGAG 61.461 60.000 0.00 0.00 38.22 4.63
4266 4374 4.778143 CCCCGAGCCGAACCCAAG 62.778 72.222 0.00 0.00 0.00 3.61
4303 4411 4.341502 GCGCCGGCAGAAGCAAAA 62.342 61.111 28.98 0.00 44.61 2.44
4304 4412 2.334653 CGCCGGCAGAAGCAAAAA 59.665 55.556 28.98 0.00 44.61 1.94
4305 4413 1.730547 CGCCGGCAGAAGCAAAAAG 60.731 57.895 28.98 0.37 44.61 2.27
4306 4414 1.373371 GCCGGCAGAAGCAAAAAGG 60.373 57.895 24.80 0.00 44.61 3.11
4307 4415 1.290009 CCGGCAGAAGCAAAAAGGG 59.710 57.895 0.00 0.00 44.61 3.95
4308 4416 1.290009 CGGCAGAAGCAAAAAGGGG 59.710 57.895 0.00 0.00 44.61 4.79
4309 4417 1.004560 GGCAGAAGCAAAAAGGGGC 60.005 57.895 0.00 0.00 44.61 5.80
4310 4418 1.373371 GCAGAAGCAAAAAGGGGCG 60.373 57.895 0.00 0.00 41.58 6.13
4311 4419 2.041153 CAGAAGCAAAAAGGGGCGT 58.959 52.632 0.00 0.00 34.54 5.68
4312 4420 0.318955 CAGAAGCAAAAAGGGGCGTG 60.319 55.000 0.00 0.00 34.54 5.34
4313 4421 0.755327 AGAAGCAAAAAGGGGCGTGT 60.755 50.000 0.00 0.00 34.54 4.49
4314 4422 0.104120 GAAGCAAAAAGGGGCGTGTT 59.896 50.000 0.00 0.00 34.54 3.32
4315 4423 0.179086 AAGCAAAAAGGGGCGTGTTG 60.179 50.000 0.00 0.00 34.54 3.33
4316 4424 2.243957 GCAAAAAGGGGCGTGTTGC 61.244 57.895 0.00 0.00 45.38 4.17
4326 4434 3.767230 CGTGTTGCCGCTCTGTCG 61.767 66.667 0.00 0.00 0.00 4.35
4335 4443 3.134792 GCTCTGTCGGCGAGAGGA 61.135 66.667 30.20 17.38 37.93 3.71
4336 4444 3.106552 CTCTGTCGGCGAGAGGAG 58.893 66.667 30.20 21.80 34.42 3.69
4337 4445 2.438614 TCTGTCGGCGAGAGGAGG 60.439 66.667 30.20 9.32 0.00 4.30
4338 4446 4.200283 CTGTCGGCGAGAGGAGGC 62.200 72.222 24.74 5.31 0.00 4.70
4343 4451 3.403558 GGCGAGAGGAGGCCCTTT 61.404 66.667 0.00 0.00 44.53 3.11
4344 4452 2.671682 GCGAGAGGAGGCCCTTTT 59.328 61.111 0.00 0.00 44.53 2.27
4345 4453 1.002011 GCGAGAGGAGGCCCTTTTT 60.002 57.895 0.00 0.00 44.53 1.94
4346 4454 1.027255 GCGAGAGGAGGCCCTTTTTC 61.027 60.000 0.00 0.00 44.53 2.29
4347 4455 0.393132 CGAGAGGAGGCCCTTTTTCC 60.393 60.000 0.00 0.00 44.53 3.13
4348 4456 0.393132 GAGAGGAGGCCCTTTTTCCG 60.393 60.000 0.00 0.00 44.53 4.30
4349 4457 2.035783 AGGAGGCCCTTTTTCCGC 59.964 61.111 0.00 0.00 40.78 5.54
4350 4458 3.068691 GGAGGCCCTTTTTCCGCC 61.069 66.667 0.00 0.00 43.35 6.13
4353 4461 3.299977 GGCCCTTTTTCCGCCGTT 61.300 61.111 0.00 0.00 31.92 4.44
4354 4462 2.732016 GCCCTTTTTCCGCCGTTT 59.268 55.556 0.00 0.00 0.00 3.60
4355 4463 1.372499 GCCCTTTTTCCGCCGTTTC 60.372 57.895 0.00 0.00 0.00 2.78
4356 4464 1.287815 CCCTTTTTCCGCCGTTTCC 59.712 57.895 0.00 0.00 0.00 3.13
4357 4465 1.176619 CCCTTTTTCCGCCGTTTCCT 61.177 55.000 0.00 0.00 0.00 3.36
4358 4466 0.240145 CCTTTTTCCGCCGTTTCCTC 59.760 55.000 0.00 0.00 0.00 3.71
4359 4467 0.240145 CTTTTTCCGCCGTTTCCTCC 59.760 55.000 0.00 0.00 0.00 4.30
4360 4468 0.465824 TTTTTCCGCCGTTTCCTCCA 60.466 50.000 0.00 0.00 0.00 3.86
4361 4469 0.465824 TTTTCCGCCGTTTCCTCCAA 60.466 50.000 0.00 0.00 0.00 3.53
4362 4470 1.167781 TTTCCGCCGTTTCCTCCAAC 61.168 55.000 0.00 0.00 0.00 3.77
4363 4471 2.032071 CCGCCGTTTCCTCCAACT 59.968 61.111 0.00 0.00 0.00 3.16
4364 4472 1.599797 CCGCCGTTTCCTCCAACTT 60.600 57.895 0.00 0.00 0.00 2.66
4365 4473 1.574702 CCGCCGTTTCCTCCAACTTC 61.575 60.000 0.00 0.00 0.00 3.01
4366 4474 1.574702 CGCCGTTTCCTCCAACTTCC 61.575 60.000 0.00 0.00 0.00 3.46
4367 4475 1.241990 GCCGTTTCCTCCAACTTCCC 61.242 60.000 0.00 0.00 0.00 3.97
4368 4476 0.608308 CCGTTTCCTCCAACTTCCCC 60.608 60.000 0.00 0.00 0.00 4.81
4369 4477 0.608308 CGTTTCCTCCAACTTCCCCC 60.608 60.000 0.00 0.00 0.00 5.40
4383 4491 4.806339 CCCCCTCGGCTTCCCTCT 62.806 72.222 0.00 0.00 0.00 3.69
4384 4492 3.157949 CCCCTCGGCTTCCCTCTC 61.158 72.222 0.00 0.00 0.00 3.20
4385 4493 2.364317 CCCTCGGCTTCCCTCTCA 60.364 66.667 0.00 0.00 0.00 3.27
4386 4494 1.764054 CCCTCGGCTTCCCTCTCAT 60.764 63.158 0.00 0.00 0.00 2.90
4387 4495 1.341156 CCCTCGGCTTCCCTCTCATT 61.341 60.000 0.00 0.00 0.00 2.57
4388 4496 0.105778 CCTCGGCTTCCCTCTCATTC 59.894 60.000 0.00 0.00 0.00 2.67
4389 4497 1.118838 CTCGGCTTCCCTCTCATTCT 58.881 55.000 0.00 0.00 0.00 2.40
4390 4498 1.068434 CTCGGCTTCCCTCTCATTCTC 59.932 57.143 0.00 0.00 0.00 2.87
4391 4499 0.105778 CGGCTTCCCTCTCATTCTCC 59.894 60.000 0.00 0.00 0.00 3.71
4392 4500 1.207791 GGCTTCCCTCTCATTCTCCA 58.792 55.000 0.00 0.00 0.00 3.86
4393 4501 1.773653 GGCTTCCCTCTCATTCTCCAT 59.226 52.381 0.00 0.00 0.00 3.41
4394 4502 2.174424 GGCTTCCCTCTCATTCTCCATT 59.826 50.000 0.00 0.00 0.00 3.16
4395 4503 3.475575 GCTTCCCTCTCATTCTCCATTC 58.524 50.000 0.00 0.00 0.00 2.67
4396 4504 3.747069 GCTTCCCTCTCATTCTCCATTCC 60.747 52.174 0.00 0.00 0.00 3.01
4397 4505 3.428063 TCCCTCTCATTCTCCATTCCT 57.572 47.619 0.00 0.00 0.00 3.36
4398 4506 3.312890 TCCCTCTCATTCTCCATTCCTC 58.687 50.000 0.00 0.00 0.00 3.71
4399 4507 2.371510 CCCTCTCATTCTCCATTCCTCC 59.628 54.545 0.00 0.00 0.00 4.30
4400 4508 2.371510 CCTCTCATTCTCCATTCCTCCC 59.628 54.545 0.00 0.00 0.00 4.30
4401 4509 2.036992 CTCTCATTCTCCATTCCTCCCG 59.963 54.545 0.00 0.00 0.00 5.14
4402 4510 0.469917 TCATTCTCCATTCCTCCCGC 59.530 55.000 0.00 0.00 0.00 6.13
4403 4511 0.536006 CATTCTCCATTCCTCCCGCC 60.536 60.000 0.00 0.00 0.00 6.13
4404 4512 0.988145 ATTCTCCATTCCTCCCGCCA 60.988 55.000 0.00 0.00 0.00 5.69
4405 4513 1.204786 TTCTCCATTCCTCCCGCCAA 61.205 55.000 0.00 0.00 0.00 4.52
4406 4514 0.988145 TCTCCATTCCTCCCGCCAAT 60.988 55.000 0.00 0.00 0.00 3.16
4407 4515 0.536006 CTCCATTCCTCCCGCCAATC 60.536 60.000 0.00 0.00 0.00 2.67
4408 4516 0.988145 TCCATTCCTCCCGCCAATCT 60.988 55.000 0.00 0.00 0.00 2.40
4409 4517 0.536006 CCATTCCTCCCGCCAATCTC 60.536 60.000 0.00 0.00 0.00 2.75
4410 4518 0.536006 CATTCCTCCCGCCAATCTCC 60.536 60.000 0.00 0.00 0.00 3.71
4411 4519 0.695803 ATTCCTCCCGCCAATCTCCT 60.696 55.000 0.00 0.00 0.00 3.69
4412 4520 1.338136 TTCCTCCCGCCAATCTCCTC 61.338 60.000 0.00 0.00 0.00 3.71
4413 4521 2.812619 CCTCCCGCCAATCTCCTCC 61.813 68.421 0.00 0.00 0.00 4.30
4414 4522 1.764054 CTCCCGCCAATCTCCTCCT 60.764 63.158 0.00 0.00 0.00 3.69
4415 4523 1.753368 CTCCCGCCAATCTCCTCCTC 61.753 65.000 0.00 0.00 0.00 3.71
4416 4524 2.812619 CCCGCCAATCTCCTCCTCC 61.813 68.421 0.00 0.00 0.00 4.30
4417 4525 2.812619 CCGCCAATCTCCTCCTCCC 61.813 68.421 0.00 0.00 0.00 4.30
4418 4526 1.764054 CGCCAATCTCCTCCTCCCT 60.764 63.158 0.00 0.00 0.00 4.20
4419 4527 1.341156 CGCCAATCTCCTCCTCCCTT 61.341 60.000 0.00 0.00 0.00 3.95
4420 4528 0.472044 GCCAATCTCCTCCTCCCTTC 59.528 60.000 0.00 0.00 0.00 3.46
4421 4529 1.135960 CCAATCTCCTCCTCCCTTCC 58.864 60.000 0.00 0.00 0.00 3.46
4422 4530 1.626350 CCAATCTCCTCCTCCCTTCCA 60.626 57.143 0.00 0.00 0.00 3.53
4423 4531 2.200081 CAATCTCCTCCTCCCTTCCAA 58.800 52.381 0.00 0.00 0.00 3.53
4424 4532 2.172293 CAATCTCCTCCTCCCTTCCAAG 59.828 54.545 0.00 0.00 0.00 3.61
4425 4533 0.793617 TCTCCTCCTCCCTTCCAAGT 59.206 55.000 0.00 0.00 0.00 3.16
4426 4534 1.199615 CTCCTCCTCCCTTCCAAGTC 58.800 60.000 0.00 0.00 0.00 3.01
4427 4535 0.614979 TCCTCCTCCCTTCCAAGTCG 60.615 60.000 0.00 0.00 0.00 4.18
4428 4536 1.617947 CCTCCTCCCTTCCAAGTCGG 61.618 65.000 0.00 0.00 0.00 4.79
4429 4537 2.245438 CTCCTCCCTTCCAAGTCGGC 62.245 65.000 0.00 0.00 33.14 5.54
4430 4538 2.269241 CTCCCTTCCAAGTCGGCC 59.731 66.667 0.00 0.00 33.14 6.13
4431 4539 3.665675 CTCCCTTCCAAGTCGGCCG 62.666 68.421 22.12 22.12 33.14 6.13
4434 4542 4.697756 CTTCCAAGTCGGCCGCCA 62.698 66.667 23.51 0.00 33.14 5.69
4435 4543 3.976701 CTTCCAAGTCGGCCGCCAT 62.977 63.158 23.51 0.00 33.14 4.40
4436 4544 4.776322 TCCAAGTCGGCCGCCATG 62.776 66.667 23.51 13.45 33.14 3.66
4448 4556 3.880846 GCCATGCCGCCGAAGAAG 61.881 66.667 0.00 0.00 0.00 2.85
4449 4557 2.436646 CCATGCCGCCGAAGAAGT 60.437 61.111 0.00 0.00 0.00 3.01
4450 4558 1.153449 CCATGCCGCCGAAGAAGTA 60.153 57.895 0.00 0.00 0.00 2.24
4451 4559 1.429148 CCATGCCGCCGAAGAAGTAC 61.429 60.000 0.00 0.00 0.00 2.73
4452 4560 0.739462 CATGCCGCCGAAGAAGTACA 60.739 55.000 0.00 0.00 0.00 2.90
4453 4561 0.178068 ATGCCGCCGAAGAAGTACAT 59.822 50.000 0.00 0.00 0.00 2.29
4454 4562 0.739462 TGCCGCCGAAGAAGTACATG 60.739 55.000 0.00 0.00 0.00 3.21
4455 4563 1.429148 GCCGCCGAAGAAGTACATGG 61.429 60.000 0.00 0.00 0.00 3.66
4456 4564 0.108329 CCGCCGAAGAAGTACATGGT 60.108 55.000 0.00 0.00 0.00 3.55
4457 4565 1.278238 CGCCGAAGAAGTACATGGTC 58.722 55.000 0.00 0.00 0.00 4.02
4458 4566 1.653151 GCCGAAGAAGTACATGGTCC 58.347 55.000 0.00 0.00 0.00 4.46
4459 4567 1.742750 GCCGAAGAAGTACATGGTCCC 60.743 57.143 0.00 0.00 0.00 4.46
4460 4568 1.134491 CCGAAGAAGTACATGGTCCCC 60.134 57.143 0.00 0.00 0.00 4.81
4461 4569 1.134491 CGAAGAAGTACATGGTCCCCC 60.134 57.143 0.00 0.00 0.00 5.40
4462 4570 0.909623 AAGAAGTACATGGTCCCCCG 59.090 55.000 0.00 0.00 0.00 5.73
4463 4571 1.153229 GAAGTACATGGTCCCCCGC 60.153 63.158 0.00 0.00 0.00 6.13
4464 4572 2.918230 GAAGTACATGGTCCCCCGCG 62.918 65.000 0.00 0.00 0.00 6.46
4506 4614 4.020617 CCACCCAGCCGAAGCAGA 62.021 66.667 0.00 0.00 43.56 4.26
4507 4615 2.435586 CACCCAGCCGAAGCAGAG 60.436 66.667 0.00 0.00 43.56 3.35
4508 4616 3.710722 ACCCAGCCGAAGCAGAGG 61.711 66.667 0.00 0.00 43.56 3.69
4509 4617 4.479993 CCCAGCCGAAGCAGAGGG 62.480 72.222 0.00 0.00 43.56 4.30
4541 4649 4.986467 CCCCTGGGCATGTCTAAC 57.014 61.111 7.39 0.00 0.00 2.34
4542 4650 1.153168 CCCCTGGGCATGTCTAACG 60.153 63.158 7.39 0.00 0.00 3.18
4543 4651 1.819632 CCCTGGGCATGTCTAACGC 60.820 63.158 0.00 0.00 0.00 4.84
4544 4652 1.819632 CCTGGGCATGTCTAACGCC 60.820 63.158 0.00 0.00 45.47 5.68
4547 4655 3.395669 GGCATGTCTAACGCCGAC 58.604 61.111 0.00 0.00 35.79 4.79
4548 4656 1.153628 GGCATGTCTAACGCCGACT 60.154 57.895 0.00 0.00 35.79 4.18
4549 4657 1.421410 GGCATGTCTAACGCCGACTG 61.421 60.000 0.00 0.00 35.79 3.51
4550 4658 1.421410 GCATGTCTAACGCCGACTGG 61.421 60.000 0.00 0.00 38.77 4.00
4551 4659 0.172578 CATGTCTAACGCCGACTGGA 59.827 55.000 0.00 0.00 37.49 3.86
4552 4660 0.892755 ATGTCTAACGCCGACTGGAA 59.107 50.000 0.00 0.00 37.49 3.53
4553 4661 0.242825 TGTCTAACGCCGACTGGAAG 59.757 55.000 0.00 0.00 42.29 3.46
4554 4662 0.458025 GTCTAACGCCGACTGGAAGG 60.458 60.000 0.00 0.00 39.30 3.46
4563 4671 2.842320 GACTGGAAGGCGGAAGTTC 58.158 57.895 0.00 0.00 39.30 3.01
4564 4672 0.034896 GACTGGAAGGCGGAAGTTCA 59.965 55.000 5.01 0.00 39.30 3.18
4565 4673 0.035458 ACTGGAAGGCGGAAGTTCAG 59.965 55.000 5.01 1.36 39.30 3.02
4566 4674 1.301677 CTGGAAGGCGGAAGTTCAGC 61.302 60.000 18.39 18.39 36.84 4.26
4567 4675 2.391389 GGAAGGCGGAAGTTCAGCG 61.391 63.158 19.60 9.20 38.48 5.18
4568 4676 3.028366 GAAGGCGGAAGTTCAGCGC 62.028 63.158 19.60 17.48 38.48 5.92
4573 4681 4.388499 GGAAGTTCAGCGCCGGGA 62.388 66.667 2.29 0.00 0.00 5.14
4574 4682 2.815647 GAAGTTCAGCGCCGGGAG 60.816 66.667 2.29 0.00 0.00 4.30
4586 4694 4.394712 CGGGAGGCTGTCACCACC 62.395 72.222 0.00 0.00 39.56 4.61
4587 4695 4.394712 GGGAGGCTGTCACCACCG 62.395 72.222 0.00 0.00 41.08 4.94
4588 4696 3.311110 GGAGGCTGTCACCACCGA 61.311 66.667 0.00 0.00 30.33 4.69
4589 4697 2.048127 GAGGCTGTCACCACCGAC 60.048 66.667 0.00 0.00 36.40 4.79
4590 4698 2.842462 AGGCTGTCACCACCGACA 60.842 61.111 0.00 0.00 43.54 4.35
4594 4702 4.293648 TGTCACCACCGACAGGCG 62.294 66.667 0.00 0.00 40.94 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 7.676468 ACCCTAGAAGATTCTTAGTTCTCTTGT 59.324 37.037 0.00 0.00 38.70 3.16
100 101 7.481798 GCGAAGAAGTCATTACCAACTTTATTG 59.518 37.037 0.00 0.00 35.90 1.90
126 127 7.236474 TCAATTTGATTCTTTCGACGATTCAG 58.764 34.615 0.00 0.00 0.00 3.02
157 158 0.244721 TGCGAGATCCACACACTCAG 59.755 55.000 0.00 0.00 0.00 3.35
173 200 0.934496 TCCGAGTGAACTTTGTTGCG 59.066 50.000 0.00 0.00 0.00 4.85
187 214 7.441458 ACCGAGGAATATCTTTTTATTTCCGAG 59.559 37.037 0.00 0.00 0.00 4.63
204 231 1.079127 CGAGCACCAACCGAGGAAT 60.079 57.895 0.00 0.00 0.00 3.01
211 238 1.669440 TGGTACTCGAGCACCAACC 59.331 57.895 31.10 20.64 41.83 3.77
217 244 1.433471 CTCGCATGGTACTCGAGCA 59.567 57.895 13.61 2.58 42.28 4.26
221 248 0.866061 CGTTCCTCGCATGGTACTCG 60.866 60.000 0.00 0.00 0.00 4.18
239 266 4.651994 GATTTACAAGTTCATGGTCTGCG 58.348 43.478 0.00 0.00 0.00 5.18
266 293 2.450609 ATTCTACCTCGCGTTTGTGT 57.549 45.000 5.77 0.00 0.00 3.72
275 302 7.371936 CCTTCTTTACCATCTATTCTACCTCG 58.628 42.308 0.00 0.00 0.00 4.63
326 353 6.465948 TGCCATTTTAATCTTGCAGATTTGT 58.534 32.000 14.02 0.00 41.90 2.83
441 497 8.795786 TTTCGAACAAAGTTTGATGGATTAAG 57.204 30.769 22.23 4.14 0.00 1.85
478 534 1.270571 TGCTTGTTGCGTGTCATAGGA 60.271 47.619 0.00 0.00 46.63 2.94
493 549 0.035630 AGCTTGGCCTACTCTGCTTG 60.036 55.000 3.32 0.00 0.00 4.01
506 562 6.090358 CACAATTTATCTTCTTTGCAGCTTGG 59.910 38.462 0.00 0.00 0.00 3.61
512 568 6.662865 TTCCCACAATTTATCTTCTTTGCA 57.337 33.333 0.00 0.00 0.00 4.08
516 572 8.421249 TTGTCATTCCCACAATTTATCTTCTT 57.579 30.769 0.00 0.00 0.00 2.52
523 579 6.322456 TGTTCACTTGTCATTCCCACAATTTA 59.678 34.615 0.00 0.00 33.30 1.40
538 594 4.377021 TCATAGCGTTTCTGTTCACTTGT 58.623 39.130 0.00 0.00 0.00 3.16
541 597 7.602644 TCTTTAATCATAGCGTTTCTGTTCACT 59.397 33.333 0.00 0.00 0.00 3.41
544 600 8.227791 TGTTCTTTAATCATAGCGTTTCTGTTC 58.772 33.333 0.00 0.00 0.00 3.18
547 603 9.638300 GTATGTTCTTTAATCATAGCGTTTCTG 57.362 33.333 0.00 0.00 0.00 3.02
553 609 9.803130 CATCTTGTATGTTCTTTAATCATAGCG 57.197 33.333 0.00 0.00 0.00 4.26
573 629 7.383102 ACCTATGAAGCTTTACAACATCTTG 57.617 36.000 0.00 0.00 0.00 3.02
574 630 8.947115 GTTACCTATGAAGCTTTACAACATCTT 58.053 33.333 0.00 0.00 0.00 2.40
604 660 7.521871 AGCCTCCATCTGAATATTTTCATTC 57.478 36.000 0.00 0.00 40.95 2.67
670 726 9.678260 AGCTGAAAATATATGTTGAGAAGAGTT 57.322 29.630 6.31 0.00 0.00 3.01
712 768 5.710513 TGAGCTCTGCAACAATTTGTATT 57.289 34.783 16.19 0.00 34.90 1.89
713 769 5.710513 TTGAGCTCTGCAACAATTTGTAT 57.289 34.783 16.19 0.00 34.90 2.29
721 777 2.330440 TCACTTTGAGCTCTGCAACA 57.670 45.000 16.19 0.00 0.00 3.33
727 783 0.767375 TGGCCTTCACTTTGAGCTCT 59.233 50.000 16.19 0.00 0.00 4.09
728 784 1.609208 TTGGCCTTCACTTTGAGCTC 58.391 50.000 6.82 6.82 0.00 4.09
729 785 2.071778 TTTGGCCTTCACTTTGAGCT 57.928 45.000 3.32 0.00 0.00 4.09
730 786 3.062042 CAATTTGGCCTTCACTTTGAGC 58.938 45.455 3.32 0.00 0.00 4.26
731 787 4.301628 GACAATTTGGCCTTCACTTTGAG 58.698 43.478 3.32 0.00 0.00 3.02
732 788 3.069443 GGACAATTTGGCCTTCACTTTGA 59.931 43.478 14.40 0.00 44.12 2.69
733 789 3.392882 GGACAATTTGGCCTTCACTTTG 58.607 45.455 14.40 2.22 44.12 2.77
734 790 3.751479 GGACAATTTGGCCTTCACTTT 57.249 42.857 14.40 0.00 44.12 2.66
744 800 3.164268 TCCAATGGAGTGGACAATTTGG 58.836 45.455 0.00 0.00 42.97 3.28
754 810 4.034510 GCTCGACTATTTTCCAATGGAGTG 59.965 45.833 0.86 0.00 31.21 3.51
755 811 4.192317 GCTCGACTATTTTCCAATGGAGT 58.808 43.478 0.86 0.00 31.21 3.85
756 812 4.034510 GTGCTCGACTATTTTCCAATGGAG 59.965 45.833 0.86 0.00 31.21 3.86
757 813 3.938963 GTGCTCGACTATTTTCCAATGGA 59.061 43.478 0.00 0.00 0.00 3.41
758 814 3.689161 TGTGCTCGACTATTTTCCAATGG 59.311 43.478 0.00 0.00 0.00 3.16
760 816 6.112734 TGTATGTGCTCGACTATTTTCCAAT 58.887 36.000 0.00 0.00 0.00 3.16
763 819 6.417191 TTTGTATGTGCTCGACTATTTTCC 57.583 37.500 0.00 0.00 0.00 3.13
764 820 8.895932 AATTTTGTATGTGCTCGACTATTTTC 57.104 30.769 0.00 0.00 0.00 2.29
788 845 4.102367 GGGGGCATGGCATCTTTTATTTAA 59.898 41.667 22.06 0.00 0.00 1.52
789 846 3.645687 GGGGGCATGGCATCTTTTATTTA 59.354 43.478 22.06 0.00 0.00 1.40
791 848 2.049372 GGGGGCATGGCATCTTTTATT 58.951 47.619 22.06 0.00 0.00 1.40
792 849 1.062275 TGGGGGCATGGCATCTTTTAT 60.062 47.619 22.06 0.00 0.00 1.40
793 850 0.337773 TGGGGGCATGGCATCTTTTA 59.662 50.000 22.06 0.00 0.00 1.52
794 851 0.326808 ATGGGGGCATGGCATCTTTT 60.327 50.000 22.06 0.00 0.00 2.27
795 852 1.052124 CATGGGGGCATGGCATCTTT 61.052 55.000 22.06 0.00 0.00 2.52
796 853 1.458777 CATGGGGGCATGGCATCTT 60.459 57.895 22.06 7.54 0.00 2.40
797 854 2.200370 CATGGGGGCATGGCATCT 59.800 61.111 22.06 0.00 0.00 2.90
907 964 5.647658 TCAGCATCGTGGTTCAAATAAAGAT 59.352 36.000 0.00 0.00 0.00 2.40
917 974 4.122776 AGACATAATCAGCATCGTGGTTC 58.877 43.478 0.00 0.00 0.00 3.62
928 985 4.219507 AGGGCGATCAGTAGACATAATCAG 59.780 45.833 0.00 0.00 0.00 2.90
1019 1076 2.997584 CGGAGGAGGTGGGAGAGGA 61.998 68.421 0.00 0.00 0.00 3.71
1248 1305 0.927029 AGAGGGAATTAGGGTTGGGC 59.073 55.000 0.00 0.00 0.00 5.36
1260 1325 0.832135 ACGCTGTGGAGAAGAGGGAA 60.832 55.000 0.00 0.00 35.82 3.97
1474 1539 8.943909 AACCAACTAACATACTGTAAGCTATC 57.056 34.615 0.00 0.00 37.60 2.08
1479 1544 9.136952 GTAGTGAACCAACTAACATACTGTAAG 57.863 37.037 0.00 0.00 35.50 2.34
1486 1551 6.872020 GCTGAAGTAGTGAACCAACTAACATA 59.128 38.462 0.00 0.00 34.50 2.29
1524 1592 5.677091 GCTCATGACCAATTTGTATCACCAC 60.677 44.000 0.00 0.00 0.00 4.16
1606 1676 8.638565 GTGTTTTTCCTGAATATCAAAATGTCG 58.361 33.333 0.00 0.00 0.00 4.35
1676 1746 5.642919 GCTTGGATGATTTTGGTGCAATAAA 59.357 36.000 0.00 0.00 0.00 1.40
1736 1806 3.933861 ACTTCTCCTGACCAAACAAGT 57.066 42.857 0.00 0.00 0.00 3.16
1747 1817 6.234177 AGACCTTCACAATTAACTTCTCCTG 58.766 40.000 0.00 0.00 0.00 3.86
1785 1855 2.649831 CCACAAATCACTGGCAGCT 58.350 52.632 15.89 0.00 0.00 4.24
1806 1878 2.564062 CTCATTCACCAAGCACCCAATT 59.436 45.455 0.00 0.00 0.00 2.32
1892 1964 4.307432 CGCTCACTTGGTTCTAAAAGAGA 58.693 43.478 0.00 0.00 0.00 3.10
1975 2047 2.279582 ACGACAGGCGACAGATAAAG 57.720 50.000 0.22 0.00 44.57 1.85
1984 2056 3.520290 AAAGAATCATACGACAGGCGA 57.480 42.857 0.22 0.00 44.57 5.54
2121 2193 7.444183 AGTTGTGCTAAAATGAGTAGCTACAAA 59.556 33.333 25.28 13.25 43.65 2.83
2282 2356 8.628882 AAAACATTCTCCTAAAAGTTTCGTTG 57.371 30.769 0.00 0.00 0.00 4.10
2283 2357 8.463607 TGAAAACATTCTCCTAAAAGTTTCGTT 58.536 29.630 0.00 0.00 0.00 3.85
2390 2465 3.069016 TGTCGGTATGTCAACACAAGTCT 59.931 43.478 0.00 0.00 35.64 3.24
2431 2506 1.598601 GGCAACTGGCAACACAAAATG 59.401 47.619 0.00 0.00 46.17 2.32
2514 2589 9.490663 GTTGCACTAACACTAATCATATTTGAC 57.509 33.333 0.00 0.00 39.16 3.18
2679 2755 4.844349 AATGCTACCTATTGTGACCAGT 57.156 40.909 0.00 0.00 0.00 4.00
2783 2860 5.695851 ATTCACATTTCAGACCTTGTGAC 57.304 39.130 4.23 0.00 45.81 3.67
2793 2870 5.491070 TCCACCAGACTATTCACATTTCAG 58.509 41.667 0.00 0.00 0.00 3.02
2831 2909 0.251742 TTTGTGCTGCTAGCCCCAAT 60.252 50.000 13.29 0.00 41.51 3.16
2833 2911 1.303561 CTTTGTGCTGCTAGCCCCA 60.304 57.895 13.29 6.27 41.51 4.96
2887 2965 3.305199 GCTAACAGAGTAACACCGACTGT 60.305 47.826 0.00 0.00 42.40 3.55
2892 2970 4.056050 AGTTTGCTAACAGAGTAACACCG 58.944 43.478 13.46 0.00 36.70 4.94
2941 3019 0.535335 TTCGTACCAGAGCATCACCC 59.465 55.000 0.00 0.00 37.82 4.61
3025 3103 4.692625 AGCTAGCAATTTATGTGGCTATCG 59.307 41.667 18.83 0.00 38.11 2.92
3049 3127 3.879892 GTGCCTTCCAAATAGAGATGACC 59.120 47.826 0.00 0.00 0.00 4.02
3105 3183 1.202698 AGTGTCAAGTTCAGTGGAGGC 60.203 52.381 0.00 0.00 0.00 4.70
3120 3198 2.739292 TCATATTTAGCGCCGAGTGTC 58.261 47.619 2.29 0.00 0.00 3.67
3142 3220 7.245419 TCCGACACATGAATTATAACACATG 57.755 36.000 21.71 21.71 43.56 3.21
3164 3242 4.195416 CCTTGAAGTTGAGGAATAGCTCC 58.805 47.826 0.00 0.00 45.81 4.70
3181 3259 3.178046 TCAGGTTAGGTATGTGCCTTGA 58.822 45.455 0.00 0.00 39.94 3.02
3219 3313 5.821470 CCATCTGCACATGAAGAATAGAGTT 59.179 40.000 3.19 0.00 32.47 3.01
3364 3466 4.446413 CGAACTACCCCGGCGCTT 62.446 66.667 7.64 0.00 0.00 4.68
3442 3544 9.730705 TGTTTCAGTAAATCATCTCAGAGAAAT 57.269 29.630 3.63 0.00 0.00 2.17
3443 3545 9.212641 CTGTTTCAGTAAATCATCTCAGAGAAA 57.787 33.333 3.63 0.00 0.00 2.52
3491 3593 4.817517 TGAGTTCCAAATTACTCGAGGAC 58.182 43.478 18.41 0.00 42.88 3.85
3513 3615 4.330944 TCCAAGACACACGTTTGATACT 57.669 40.909 9.03 2.24 0.00 2.12
3545 3649 4.887071 TGATTGTCAAAGCCACTAAAGTGT 59.113 37.500 9.17 0.00 44.21 3.55
3548 3652 7.951530 AAATTGATTGTCAAAGCCACTAAAG 57.048 32.000 0.00 0.00 40.12 1.85
3553 3657 7.092716 ACTCATAAATTGATTGTCAAAGCCAC 58.907 34.615 0.00 0.00 40.12 5.01
3570 3674 8.659925 ACATCAAAATGCAACAAACTCATAAA 57.340 26.923 0.00 0.00 36.26 1.40
3725 3831 7.360361 AGTAACCAGAGATTTTTGCTTTAACG 58.640 34.615 0.00 0.00 0.00 3.18
3741 3847 9.158233 GCTGTATTTGTAAACATAGTAACCAGA 57.842 33.333 0.00 0.00 0.00 3.86
3767 3873 2.932614 GTCGATGTGGTTCTTCCTCATG 59.067 50.000 6.23 0.00 46.43 3.07
3793 3899 5.474876 CCTATAGGCAATCCATGGAAAGAAC 59.525 44.000 20.67 8.55 33.74 3.01
3815 3923 2.513738 TGTTTAATCTGCCCCTATGCCT 59.486 45.455 0.00 0.00 0.00 4.75
3820 3928 3.308832 CCTTGGTGTTTAATCTGCCCCTA 60.309 47.826 0.00 0.00 0.00 3.53
3821 3929 2.557452 CCTTGGTGTTTAATCTGCCCCT 60.557 50.000 0.00 0.00 0.00 4.79
3822 3930 1.824852 CCTTGGTGTTTAATCTGCCCC 59.175 52.381 0.00 0.00 0.00 5.80
3823 3931 2.492088 GTCCTTGGTGTTTAATCTGCCC 59.508 50.000 0.00 0.00 0.00 5.36
3824 3932 3.153919 TGTCCTTGGTGTTTAATCTGCC 58.846 45.455 0.00 0.00 0.00 4.85
3825 3933 4.846779 TTGTCCTTGGTGTTTAATCTGC 57.153 40.909 0.00 0.00 0.00 4.26
3826 3934 8.184192 GTCATATTGTCCTTGGTGTTTAATCTG 58.816 37.037 0.00 0.00 0.00 2.90
3827 3935 7.888021 TGTCATATTGTCCTTGGTGTTTAATCT 59.112 33.333 0.00 0.00 0.00 2.40
3871 3979 0.106569 TGGGCACATCATGATGGGTC 60.107 55.000 32.91 31.76 45.66 4.46
3872 3980 0.106369 CTGGGCACATCATGATGGGT 60.106 55.000 32.91 15.25 43.92 4.51
3873 3981 1.461091 GCTGGGCACATCATGATGGG 61.461 60.000 33.31 31.75 44.83 4.00
3874 3982 1.792118 CGCTGGGCACATCATGATGG 61.792 60.000 33.31 24.03 42.91 3.51
3875 3983 1.652563 CGCTGGGCACATCATGATG 59.347 57.895 29.95 29.95 44.15 3.07
3876 3984 2.191513 GCGCTGGGCACATCATGAT 61.192 57.895 12.19 1.18 42.87 2.45
3877 3985 2.825387 GCGCTGGGCACATCATGA 60.825 61.111 12.19 0.00 42.87 3.07
3889 3997 3.805267 GGATGAACTCCAGCGCTG 58.195 61.111 30.52 30.52 44.26 5.18
3896 4004 3.808618 GCAGGGTATGATGGATGAACTCC 60.809 52.174 0.00 0.00 45.19 3.85
3897 4005 3.181451 TGCAGGGTATGATGGATGAACTC 60.181 47.826 0.00 0.00 0.00 3.01
3898 4006 2.779430 TGCAGGGTATGATGGATGAACT 59.221 45.455 0.00 0.00 0.00 3.01
3899 4007 3.144506 CTGCAGGGTATGATGGATGAAC 58.855 50.000 5.57 0.00 0.00 3.18
3900 4008 3.047857 TCTGCAGGGTATGATGGATGAA 58.952 45.455 15.13 0.00 0.00 2.57
3901 4009 2.693210 TCTGCAGGGTATGATGGATGA 58.307 47.619 15.13 0.00 0.00 2.92
3902 4010 3.497103 TTCTGCAGGGTATGATGGATG 57.503 47.619 15.13 0.00 0.00 3.51
3903 4011 4.404640 CATTTCTGCAGGGTATGATGGAT 58.595 43.478 15.13 0.00 0.00 3.41
3904 4012 3.824133 CATTTCTGCAGGGTATGATGGA 58.176 45.455 15.13 0.00 0.00 3.41
3918 4026 4.409570 CTCAAAACCATCGAGCATTTCTG 58.590 43.478 0.00 0.00 0.00 3.02
3919 4027 3.441572 CCTCAAAACCATCGAGCATTTCT 59.558 43.478 0.00 0.00 0.00 2.52
3920 4028 3.191371 ACCTCAAAACCATCGAGCATTTC 59.809 43.478 0.00 0.00 0.00 2.17
3921 4029 3.157087 ACCTCAAAACCATCGAGCATTT 58.843 40.909 0.00 0.00 0.00 2.32
3922 4030 2.795329 ACCTCAAAACCATCGAGCATT 58.205 42.857 0.00 0.00 0.00 3.56
3923 4031 2.496899 ACCTCAAAACCATCGAGCAT 57.503 45.000 0.00 0.00 0.00 3.79
3924 4032 2.301870 ACTACCTCAAAACCATCGAGCA 59.698 45.455 0.00 0.00 0.00 4.26
3925 4033 2.973945 ACTACCTCAAAACCATCGAGC 58.026 47.619 0.00 0.00 0.00 5.03
3926 4034 6.395629 TCTTAACTACCTCAAAACCATCGAG 58.604 40.000 0.00 0.00 0.00 4.04
3927 4035 6.349243 TCTTAACTACCTCAAAACCATCGA 57.651 37.500 0.00 0.00 0.00 3.59
3928 4036 5.063564 GCTCTTAACTACCTCAAAACCATCG 59.936 44.000 0.00 0.00 0.00 3.84
3929 4037 5.938125 TGCTCTTAACTACCTCAAAACCATC 59.062 40.000 0.00 0.00 0.00 3.51
3930 4038 5.876357 TGCTCTTAACTACCTCAAAACCAT 58.124 37.500 0.00 0.00 0.00 3.55
3931 4039 5.298989 TGCTCTTAACTACCTCAAAACCA 57.701 39.130 0.00 0.00 0.00 3.67
3932 4040 6.174049 AGATGCTCTTAACTACCTCAAAACC 58.826 40.000 0.00 0.00 0.00 3.27
3933 4041 6.314152 GGAGATGCTCTTAACTACCTCAAAAC 59.686 42.308 0.00 0.00 0.00 2.43
3934 4042 6.013725 TGGAGATGCTCTTAACTACCTCAAAA 60.014 38.462 0.00 0.00 0.00 2.44
3935 4043 5.483937 TGGAGATGCTCTTAACTACCTCAAA 59.516 40.000 0.00 0.00 0.00 2.69
3936 4044 5.023452 TGGAGATGCTCTTAACTACCTCAA 58.977 41.667 0.00 0.00 0.00 3.02
3937 4045 4.610333 TGGAGATGCTCTTAACTACCTCA 58.390 43.478 0.00 0.00 0.00 3.86
3938 4046 4.500716 GCTGGAGATGCTCTTAACTACCTC 60.501 50.000 0.00 0.00 0.00 3.85
3939 4047 3.386402 GCTGGAGATGCTCTTAACTACCT 59.614 47.826 0.00 0.00 0.00 3.08
3940 4048 3.493524 GGCTGGAGATGCTCTTAACTACC 60.494 52.174 0.00 0.00 0.00 3.18
3941 4049 3.723260 GGCTGGAGATGCTCTTAACTAC 58.277 50.000 0.00 0.00 0.00 2.73
3942 4050 2.362397 CGGCTGGAGATGCTCTTAACTA 59.638 50.000 0.00 0.00 0.00 2.24
3943 4051 1.137872 CGGCTGGAGATGCTCTTAACT 59.862 52.381 0.00 0.00 0.00 2.24
3944 4052 1.134670 ACGGCTGGAGATGCTCTTAAC 60.135 52.381 0.00 0.00 0.00 2.01
3945 4053 1.134699 CACGGCTGGAGATGCTCTTAA 60.135 52.381 0.00 0.00 0.00 1.85
3946 4054 0.461548 CACGGCTGGAGATGCTCTTA 59.538 55.000 0.00 0.00 0.00 2.10
3947 4055 1.220206 CACGGCTGGAGATGCTCTT 59.780 57.895 0.00 0.00 0.00 2.85
3948 4056 1.954362 GACACGGCTGGAGATGCTCT 61.954 60.000 0.00 0.00 0.00 4.09
3949 4057 1.520342 GACACGGCTGGAGATGCTC 60.520 63.158 0.00 0.00 0.00 4.26
3950 4058 2.581354 GACACGGCTGGAGATGCT 59.419 61.111 0.00 0.00 0.00 3.79
3951 4059 2.512515 GGACACGGCTGGAGATGC 60.513 66.667 0.00 0.00 0.00 3.91
3952 4060 2.187946 GGGACACGGCTGGAGATG 59.812 66.667 0.00 0.00 0.00 2.90
3953 4061 3.083997 GGGGACACGGCTGGAGAT 61.084 66.667 0.00 0.00 0.00 2.75
3967 4075 4.760047 CTTGGGAGCGTGTCGGGG 62.760 72.222 0.00 0.00 0.00 5.73
3968 4076 4.760047 CCTTGGGAGCGTGTCGGG 62.760 72.222 0.00 0.00 0.00 5.14
3969 4077 4.003788 ACCTTGGGAGCGTGTCGG 62.004 66.667 0.00 0.00 0.00 4.79
3970 4078 2.507110 ATCACCTTGGGAGCGTGTCG 62.507 60.000 0.00 0.00 0.00 4.35
3971 4079 0.321653 AATCACCTTGGGAGCGTGTC 60.322 55.000 0.00 0.00 0.00 3.67
3972 4080 0.110486 AAATCACCTTGGGAGCGTGT 59.890 50.000 0.00 0.00 0.00 4.49
3973 4081 1.247567 AAAATCACCTTGGGAGCGTG 58.752 50.000 0.00 0.00 0.00 5.34
3974 4082 1.995376 AAAAATCACCTTGGGAGCGT 58.005 45.000 0.00 0.00 0.00 5.07
3990 4098 0.818445 TCGGCCGCCAACACTAAAAA 60.818 50.000 23.51 0.00 0.00 1.94
3991 4099 0.818445 TTCGGCCGCCAACACTAAAA 60.818 50.000 23.51 1.64 0.00 1.52
3992 4100 0.818445 TTTCGGCCGCCAACACTAAA 60.818 50.000 23.51 10.50 0.00 1.85
3993 4101 0.818445 TTTTCGGCCGCCAACACTAA 60.818 50.000 23.51 3.41 0.00 2.24
3994 4102 0.606944 ATTTTCGGCCGCCAACACTA 60.607 50.000 23.51 0.00 0.00 2.74
3995 4103 1.862602 GATTTTCGGCCGCCAACACT 61.863 55.000 23.51 0.00 0.00 3.55
3996 4104 1.443702 GATTTTCGGCCGCCAACAC 60.444 57.895 23.51 9.48 0.00 3.32
3997 4105 2.958576 GATTTTCGGCCGCCAACA 59.041 55.556 23.51 3.68 0.00 3.33
3998 4106 2.202427 CGATTTTCGGCCGCCAAC 60.202 61.111 23.51 9.60 36.00 3.77
3999 4107 2.358860 TCGATTTTCGGCCGCCAA 60.359 55.556 23.51 16.11 40.88 4.52
4000 4108 3.122323 GTCGATTTTCGGCCGCCA 61.122 61.111 23.51 6.50 38.79 5.69
4005 4113 3.918102 GATTGGGTCGATTTTCGGC 57.082 52.632 0.00 0.00 44.91 5.54
4018 4126 4.794648 TCTTGGGGGCGCGATTGG 62.795 66.667 12.10 0.00 0.00 3.16
4019 4127 2.516930 ATCTTGGGGGCGCGATTG 60.517 61.111 12.10 0.00 0.00 2.67
4020 4128 2.203209 GATCTTGGGGGCGCGATT 60.203 61.111 12.10 0.00 0.00 3.34
4021 4129 3.164269 AGATCTTGGGGGCGCGAT 61.164 61.111 12.10 0.00 0.00 4.58
4022 4130 3.849951 GAGATCTTGGGGGCGCGA 61.850 66.667 12.10 0.00 0.00 5.87
4023 4131 2.947938 AATGAGATCTTGGGGGCGCG 62.948 60.000 0.00 0.00 0.00 6.86
4024 4132 0.753111 AAATGAGATCTTGGGGGCGC 60.753 55.000 0.00 0.00 0.00 6.53
4025 4133 2.498167 CTAAATGAGATCTTGGGGGCG 58.502 52.381 0.00 0.00 0.00 6.13
4026 4134 2.234143 GCTAAATGAGATCTTGGGGGC 58.766 52.381 0.00 0.00 0.00 5.80
4027 4135 2.498167 CGCTAAATGAGATCTTGGGGG 58.502 52.381 0.00 0.00 0.00 5.40
4028 4136 1.876156 GCGCTAAATGAGATCTTGGGG 59.124 52.381 0.00 0.00 0.00 4.96
4029 4137 1.876156 GGCGCTAAATGAGATCTTGGG 59.124 52.381 7.64 0.00 0.00 4.12
4030 4138 1.528586 CGGCGCTAAATGAGATCTTGG 59.471 52.381 7.64 0.00 0.00 3.61
4031 4139 1.528586 CCGGCGCTAAATGAGATCTTG 59.471 52.381 7.64 0.00 0.00 3.02
4032 4140 1.139058 ACCGGCGCTAAATGAGATCTT 59.861 47.619 7.64 0.00 0.00 2.40
4033 4141 0.753262 ACCGGCGCTAAATGAGATCT 59.247 50.000 7.64 0.00 0.00 2.75
4034 4142 1.583054 AACCGGCGCTAAATGAGATC 58.417 50.000 7.64 0.00 0.00 2.75
4035 4143 2.038387 AAACCGGCGCTAAATGAGAT 57.962 45.000 7.64 0.00 0.00 2.75
4036 4144 2.546778 CTAAACCGGCGCTAAATGAGA 58.453 47.619 7.64 0.00 0.00 3.27
4037 4145 1.597663 CCTAAACCGGCGCTAAATGAG 59.402 52.381 7.64 0.00 0.00 2.90
4038 4146 1.658994 CCTAAACCGGCGCTAAATGA 58.341 50.000 7.64 0.00 0.00 2.57
4039 4147 0.028902 GCCTAAACCGGCGCTAAATG 59.971 55.000 7.64 0.00 40.79 2.32
4040 4148 2.400911 GCCTAAACCGGCGCTAAAT 58.599 52.632 7.64 0.00 40.79 1.40
4041 4149 3.893572 GCCTAAACCGGCGCTAAA 58.106 55.556 7.64 0.00 40.79 1.85
4050 4158 3.416119 GCTGTTAATTCGGCCTAAACC 57.584 47.619 0.00 0.00 34.02 3.27
4057 4165 0.733150 GGTCTGGCTGTTAATTCGGC 59.267 55.000 0.00 0.00 38.81 5.54
4058 4166 1.339631 TGGGTCTGGCTGTTAATTCGG 60.340 52.381 0.00 0.00 0.00 4.30
4059 4167 2.107950 TGGGTCTGGCTGTTAATTCG 57.892 50.000 0.00 0.00 0.00 3.34
4060 4168 3.620488 TGATGGGTCTGGCTGTTAATTC 58.380 45.455 0.00 0.00 0.00 2.17
4061 4169 3.737559 TGATGGGTCTGGCTGTTAATT 57.262 42.857 0.00 0.00 0.00 1.40
4062 4170 3.202818 TCATGATGGGTCTGGCTGTTAAT 59.797 43.478 0.00 0.00 0.00 1.40
4063 4171 2.575735 TCATGATGGGTCTGGCTGTTAA 59.424 45.455 0.00 0.00 0.00 2.01
4064 4172 2.195727 TCATGATGGGTCTGGCTGTTA 58.804 47.619 0.00 0.00 0.00 2.41
4065 4173 0.994247 TCATGATGGGTCTGGCTGTT 59.006 50.000 0.00 0.00 0.00 3.16
4066 4174 1.133884 CATCATGATGGGTCTGGCTGT 60.134 52.381 25.37 0.00 35.24 4.40
4067 4175 1.133884 ACATCATGATGGGTCTGGCTG 60.134 52.381 33.31 11.65 42.91 4.85
4068 4176 1.133884 CACATCATGATGGGTCTGGCT 60.134 52.381 33.31 12.16 42.91 4.75
4069 4177 1.315690 CACATCATGATGGGTCTGGC 58.684 55.000 33.31 0.00 42.91 4.85
4070 4178 1.315690 GCACATCATGATGGGTCTGG 58.684 55.000 32.91 18.16 43.92 3.86
4071 4179 1.315690 GGCACATCATGATGGGTCTG 58.684 55.000 32.91 24.07 43.20 3.51
4072 4180 0.184451 GGGCACATCATGATGGGTCT 59.816 55.000 34.78 15.36 45.67 3.85
4073 4181 0.106569 TGGGCACATCATGATGGGTC 60.107 55.000 32.91 31.76 45.66 4.46
4131 4239 5.938125 TGCTCTTAACTACCTCAAAACCATC 59.062 40.000 0.00 0.00 0.00 3.51
4144 4252 2.362397 CGGCTGGAGATGCTCTTAACTA 59.638 50.000 0.00 0.00 0.00 2.24
4151 4259 1.520342 GACACGGCTGGAGATGCTC 60.520 63.158 0.00 0.00 0.00 4.26
4152 4260 2.581354 GACACGGCTGGAGATGCT 59.419 61.111 0.00 0.00 0.00 3.79
4153 4261 2.512515 GGACACGGCTGGAGATGC 60.513 66.667 0.00 0.00 0.00 3.91
4154 4262 2.187946 GGGACACGGCTGGAGATG 59.812 66.667 0.00 0.00 0.00 2.90
4155 4263 3.083997 GGGGACACGGCTGGAGAT 61.084 66.667 0.00 0.00 0.00 2.75
4177 4285 2.087344 GACTGGGTCGATTTTCGGC 58.913 57.895 0.00 0.00 44.91 5.54
4188 4296 4.974438 TTGGGGGCTCGACTGGGT 62.974 66.667 0.00 0.00 0.00 4.51
4189 4297 4.101448 CTTGGGGGCTCGACTGGG 62.101 72.222 0.00 0.00 0.00 4.45
4190 4298 2.317149 GATCTTGGGGGCTCGACTGG 62.317 65.000 0.00 0.00 0.00 4.00
4191 4299 1.144936 GATCTTGGGGGCTCGACTG 59.855 63.158 0.00 0.00 0.00 3.51
4192 4300 1.002274 AGATCTTGGGGGCTCGACT 59.998 57.895 0.00 0.00 0.00 4.18
4193 4301 1.330655 TGAGATCTTGGGGGCTCGAC 61.331 60.000 0.00 0.00 0.00 4.20
4194 4302 0.399091 ATGAGATCTTGGGGGCTCGA 60.399 55.000 0.00 0.00 0.00 4.04
4195 4303 0.471617 AATGAGATCTTGGGGGCTCG 59.528 55.000 0.00 0.00 0.00 5.03
4196 4304 2.744352 AAATGAGATCTTGGGGGCTC 57.256 50.000 0.00 0.00 0.00 4.70
4197 4305 2.158549 GCTAAATGAGATCTTGGGGGCT 60.159 50.000 0.00 0.00 0.00 5.19
4198 4306 2.234143 GCTAAATGAGATCTTGGGGGC 58.766 52.381 0.00 0.00 0.00 5.80
4199 4307 2.498167 CGCTAAATGAGATCTTGGGGG 58.502 52.381 0.00 0.00 0.00 5.40
4200 4308 1.876156 GCGCTAAATGAGATCTTGGGG 59.124 52.381 0.00 0.00 0.00 4.96
4201 4309 1.876156 GGCGCTAAATGAGATCTTGGG 59.124 52.381 7.64 0.00 0.00 4.12
4202 4310 1.528586 CGGCGCTAAATGAGATCTTGG 59.471 52.381 7.64 0.00 0.00 3.61
4203 4311 1.528586 CCGGCGCTAAATGAGATCTTG 59.471 52.381 7.64 0.00 0.00 3.02
4204 4312 1.139058 ACCGGCGCTAAATGAGATCTT 59.861 47.619 7.64 0.00 0.00 2.40
4205 4313 0.753262 ACCGGCGCTAAATGAGATCT 59.247 50.000 7.64 0.00 0.00 2.75
4206 4314 1.583054 AACCGGCGCTAAATGAGATC 58.417 50.000 7.64 0.00 0.00 2.75
4207 4315 2.038387 AAACCGGCGCTAAATGAGAT 57.962 45.000 7.64 0.00 0.00 2.75
4208 4316 2.546778 CTAAACCGGCGCTAAATGAGA 58.453 47.619 7.64 0.00 0.00 3.27
4209 4317 1.597663 CCTAAACCGGCGCTAAATGAG 59.402 52.381 7.64 0.00 0.00 2.90
4210 4318 1.658994 CCTAAACCGGCGCTAAATGA 58.341 50.000 7.64 0.00 0.00 2.57
4211 4319 0.028902 GCCTAAACCGGCGCTAAATG 59.971 55.000 7.64 0.00 40.79 2.32
4212 4320 2.400911 GCCTAAACCGGCGCTAAAT 58.599 52.632 7.64 0.00 40.79 1.40
4213 4321 3.893572 GCCTAAACCGGCGCTAAA 58.106 55.556 7.64 0.00 40.79 1.85
4222 4330 4.139038 TGGCTATTAATTCGGCCTAAACC 58.861 43.478 19.96 0.00 44.36 3.27
4223 4331 4.320275 GCTGGCTATTAATTCGGCCTAAAC 60.320 45.833 19.96 9.08 44.36 2.01
4224 4332 3.818773 GCTGGCTATTAATTCGGCCTAAA 59.181 43.478 19.96 0.00 44.36 1.85
4225 4333 3.408634 GCTGGCTATTAATTCGGCCTAA 58.591 45.455 19.96 0.00 44.36 2.69
4226 4334 2.611971 CGCTGGCTATTAATTCGGCCTA 60.612 50.000 19.96 0.00 44.36 3.93
4227 4335 1.878102 CGCTGGCTATTAATTCGGCCT 60.878 52.381 19.96 0.00 44.36 5.19
4228 4336 0.517316 CGCTGGCTATTAATTCGGCC 59.483 55.000 15.43 15.43 44.31 6.13
4229 4337 1.194772 GTCGCTGGCTATTAATTCGGC 59.805 52.381 0.00 0.00 0.00 5.54
4230 4338 1.798813 GGTCGCTGGCTATTAATTCGG 59.201 52.381 0.00 0.00 0.00 4.30
4231 4339 1.798813 GGGTCGCTGGCTATTAATTCG 59.201 52.381 0.00 0.00 0.00 3.34
4232 4340 2.152016 GGGGTCGCTGGCTATTAATTC 58.848 52.381 0.00 0.00 0.00 2.17
4233 4341 1.542547 CGGGGTCGCTGGCTATTAATT 60.543 52.381 0.00 0.00 0.00 1.40
4234 4342 0.034896 CGGGGTCGCTGGCTATTAAT 59.965 55.000 0.00 0.00 0.00 1.40
4235 4343 1.044231 TCGGGGTCGCTGGCTATTAA 61.044 55.000 0.00 0.00 36.13 1.40
4236 4344 1.456145 TCGGGGTCGCTGGCTATTA 60.456 57.895 0.00 0.00 36.13 0.98
4237 4345 2.762459 TCGGGGTCGCTGGCTATT 60.762 61.111 0.00 0.00 36.13 1.73
4238 4346 3.227276 CTCGGGGTCGCTGGCTAT 61.227 66.667 0.00 0.00 36.13 2.97
4249 4357 4.778143 CTTGGGTTCGGCTCGGGG 62.778 72.222 0.00 0.00 0.00 5.73
4286 4394 3.839642 TTTTTGCTTCTGCCGGCGC 62.840 57.895 23.90 19.58 38.71 6.53
4287 4395 1.730547 CTTTTTGCTTCTGCCGGCG 60.731 57.895 23.90 16.91 38.71 6.46
4288 4396 1.373371 CCTTTTTGCTTCTGCCGGC 60.373 57.895 22.73 22.73 38.71 6.13
4289 4397 1.290009 CCCTTTTTGCTTCTGCCGG 59.710 57.895 0.00 0.00 38.71 6.13
4290 4398 1.290009 CCCCTTTTTGCTTCTGCCG 59.710 57.895 0.00 0.00 38.71 5.69
4291 4399 1.004560 GCCCCTTTTTGCTTCTGCC 60.005 57.895 0.00 0.00 38.71 4.85
4292 4400 1.373371 CGCCCCTTTTTGCTTCTGC 60.373 57.895 0.00 0.00 40.20 4.26
4293 4401 0.318955 CACGCCCCTTTTTGCTTCTG 60.319 55.000 0.00 0.00 0.00 3.02
4294 4402 0.755327 ACACGCCCCTTTTTGCTTCT 60.755 50.000 0.00 0.00 0.00 2.85
4295 4403 0.104120 AACACGCCCCTTTTTGCTTC 59.896 50.000 0.00 0.00 0.00 3.86
4296 4404 0.179086 CAACACGCCCCTTTTTGCTT 60.179 50.000 0.00 0.00 0.00 3.91
4297 4405 1.441311 CAACACGCCCCTTTTTGCT 59.559 52.632 0.00 0.00 0.00 3.91
4298 4406 2.243957 GCAACACGCCCCTTTTTGC 61.244 57.895 0.00 0.00 36.14 3.68
4299 4407 4.026226 GCAACACGCCCCTTTTTG 57.974 55.556 0.00 0.00 32.94 2.44
4309 4417 3.767230 CGACAGAGCGGCAACACG 61.767 66.667 1.45 0.00 0.00 4.49
4310 4418 3.414700 CCGACAGAGCGGCAACAC 61.415 66.667 1.45 0.00 45.38 3.32
4318 4426 3.119709 CTCCTCTCGCCGACAGAGC 62.120 68.421 0.00 0.00 36.77 4.09
4319 4427 2.477176 CCTCCTCTCGCCGACAGAG 61.477 68.421 0.00 0.00 37.70 3.35
4320 4428 2.438614 CCTCCTCTCGCCGACAGA 60.439 66.667 0.00 0.00 0.00 3.41
4321 4429 4.200283 GCCTCCTCTCGCCGACAG 62.200 72.222 0.00 0.00 0.00 3.51
4326 4434 2.485780 AAAAAGGGCCTCCTCTCGCC 62.486 60.000 6.46 0.00 44.07 5.54
4327 4435 1.002011 AAAAAGGGCCTCCTCTCGC 60.002 57.895 6.46 0.00 44.07 5.03
4328 4436 0.393132 GGAAAAAGGGCCTCCTCTCG 60.393 60.000 6.46 0.00 44.07 4.04
4329 4437 0.393132 CGGAAAAAGGGCCTCCTCTC 60.393 60.000 6.46 1.04 44.07 3.20
4330 4438 1.685820 CGGAAAAAGGGCCTCCTCT 59.314 57.895 6.46 0.00 44.07 3.69
4331 4439 2.046864 GCGGAAAAAGGGCCTCCTC 61.047 63.158 6.46 3.48 44.07 3.71
4333 4441 3.068691 GGCGGAAAAAGGGCCTCC 61.069 66.667 6.46 2.26 43.52 4.30
4334 4442 3.440415 CGGCGGAAAAAGGGCCTC 61.440 66.667 6.46 0.00 44.68 4.70
4335 4443 3.802852 AACGGCGGAAAAAGGGCCT 62.803 57.895 13.24 0.00 44.68 5.19
4336 4444 2.758770 GAAACGGCGGAAAAAGGGCC 62.759 60.000 13.24 0.00 43.42 5.80
4337 4445 1.372499 GAAACGGCGGAAAAAGGGC 60.372 57.895 13.24 0.00 0.00 5.19
4338 4446 1.176619 AGGAAACGGCGGAAAAAGGG 61.177 55.000 13.24 0.00 0.00 3.95
4339 4447 0.240145 GAGGAAACGGCGGAAAAAGG 59.760 55.000 13.24 0.00 0.00 3.11
4340 4448 0.240145 GGAGGAAACGGCGGAAAAAG 59.760 55.000 13.24 0.00 0.00 2.27
4341 4449 0.465824 TGGAGGAAACGGCGGAAAAA 60.466 50.000 13.24 0.00 0.00 1.94
4342 4450 0.465824 TTGGAGGAAACGGCGGAAAA 60.466 50.000 13.24 0.00 0.00 2.29
4343 4451 1.148723 TTGGAGGAAACGGCGGAAA 59.851 52.632 13.24 0.00 0.00 3.13
4344 4452 1.598685 GTTGGAGGAAACGGCGGAA 60.599 57.895 13.24 0.00 0.00 4.30
4345 4453 2.031465 GTTGGAGGAAACGGCGGA 59.969 61.111 13.24 0.00 0.00 5.54
4346 4454 1.574702 GAAGTTGGAGGAAACGGCGG 61.575 60.000 13.24 0.00 35.13 6.13
4347 4455 1.574702 GGAAGTTGGAGGAAACGGCG 61.575 60.000 4.80 4.80 35.13 6.46
4348 4456 1.241990 GGGAAGTTGGAGGAAACGGC 61.242 60.000 0.00 0.00 35.13 5.68
4349 4457 0.608308 GGGGAAGTTGGAGGAAACGG 60.608 60.000 0.00 0.00 35.13 4.44
4350 4458 0.608308 GGGGGAAGTTGGAGGAAACG 60.608 60.000 0.00 0.00 35.13 3.60
4351 4459 3.358554 GGGGGAAGTTGGAGGAAAC 57.641 57.895 0.00 0.00 0.00 2.78
4366 4474 4.806339 AGAGGGAAGCCGAGGGGG 62.806 72.222 0.00 0.00 39.58 5.40
4367 4475 3.157949 GAGAGGGAAGCCGAGGGG 61.158 72.222 0.00 0.00 0.00 4.79
4368 4476 1.341156 AATGAGAGGGAAGCCGAGGG 61.341 60.000 0.00 0.00 0.00 4.30
4369 4477 0.105778 GAATGAGAGGGAAGCCGAGG 59.894 60.000 0.00 0.00 0.00 4.63
4370 4478 1.068434 GAGAATGAGAGGGAAGCCGAG 59.932 57.143 0.00 0.00 0.00 4.63
4371 4479 1.115467 GAGAATGAGAGGGAAGCCGA 58.885 55.000 0.00 0.00 0.00 5.54
4372 4480 0.105778 GGAGAATGAGAGGGAAGCCG 59.894 60.000 0.00 0.00 0.00 5.52
4373 4481 1.207791 TGGAGAATGAGAGGGAAGCC 58.792 55.000 0.00 0.00 0.00 4.35
4374 4482 3.475575 GAATGGAGAATGAGAGGGAAGC 58.524 50.000 0.00 0.00 0.00 3.86
4375 4483 3.715834 AGGAATGGAGAATGAGAGGGAAG 59.284 47.826 0.00 0.00 0.00 3.46
4376 4484 3.713764 GAGGAATGGAGAATGAGAGGGAA 59.286 47.826 0.00 0.00 0.00 3.97
4377 4485 3.312890 GAGGAATGGAGAATGAGAGGGA 58.687 50.000 0.00 0.00 0.00 4.20
4378 4486 2.371510 GGAGGAATGGAGAATGAGAGGG 59.628 54.545 0.00 0.00 0.00 4.30
4379 4487 2.371510 GGGAGGAATGGAGAATGAGAGG 59.628 54.545 0.00 0.00 0.00 3.69
4380 4488 2.036992 CGGGAGGAATGGAGAATGAGAG 59.963 54.545 0.00 0.00 0.00 3.20
4381 4489 2.042464 CGGGAGGAATGGAGAATGAGA 58.958 52.381 0.00 0.00 0.00 3.27
4382 4490 1.542108 GCGGGAGGAATGGAGAATGAG 60.542 57.143 0.00 0.00 0.00 2.90
4383 4491 0.469917 GCGGGAGGAATGGAGAATGA 59.530 55.000 0.00 0.00 0.00 2.57
4384 4492 0.536006 GGCGGGAGGAATGGAGAATG 60.536 60.000 0.00 0.00 0.00 2.67
4385 4493 0.988145 TGGCGGGAGGAATGGAGAAT 60.988 55.000 0.00 0.00 0.00 2.40
4386 4494 1.204786 TTGGCGGGAGGAATGGAGAA 61.205 55.000 0.00 0.00 0.00 2.87
4387 4495 0.988145 ATTGGCGGGAGGAATGGAGA 60.988 55.000 0.00 0.00 0.00 3.71
4388 4496 0.536006 GATTGGCGGGAGGAATGGAG 60.536 60.000 0.00 0.00 0.00 3.86
4389 4497 0.988145 AGATTGGCGGGAGGAATGGA 60.988 55.000 0.00 0.00 0.00 3.41
4390 4498 0.536006 GAGATTGGCGGGAGGAATGG 60.536 60.000 0.00 0.00 0.00 3.16
4391 4499 0.536006 GGAGATTGGCGGGAGGAATG 60.536 60.000 0.00 0.00 0.00 2.67
4392 4500 0.695803 AGGAGATTGGCGGGAGGAAT 60.696 55.000 0.00 0.00 0.00 3.01
4393 4501 1.306997 AGGAGATTGGCGGGAGGAA 60.307 57.895 0.00 0.00 0.00 3.36
4394 4502 1.762460 GAGGAGATTGGCGGGAGGA 60.762 63.158 0.00 0.00 0.00 3.71
4395 4503 2.812619 GGAGGAGATTGGCGGGAGG 61.813 68.421 0.00 0.00 0.00 4.30
4396 4504 1.753368 GAGGAGGAGATTGGCGGGAG 61.753 65.000 0.00 0.00 0.00 4.30
4397 4505 1.762460 GAGGAGGAGATTGGCGGGA 60.762 63.158 0.00 0.00 0.00 5.14
4398 4506 2.812619 GGAGGAGGAGATTGGCGGG 61.813 68.421 0.00 0.00 0.00 6.13
4399 4507 2.812619 GGGAGGAGGAGATTGGCGG 61.813 68.421 0.00 0.00 0.00 6.13
4400 4508 1.341156 AAGGGAGGAGGAGATTGGCG 61.341 60.000 0.00 0.00 0.00 5.69
4401 4509 0.472044 GAAGGGAGGAGGAGATTGGC 59.528 60.000 0.00 0.00 0.00 4.52
4402 4510 1.135960 GGAAGGGAGGAGGAGATTGG 58.864 60.000 0.00 0.00 0.00 3.16
4403 4511 1.885049 TGGAAGGGAGGAGGAGATTG 58.115 55.000 0.00 0.00 0.00 2.67
4404 4512 2.226013 ACTTGGAAGGGAGGAGGAGATT 60.226 50.000 0.00 0.00 0.00 2.40
4405 4513 1.367848 ACTTGGAAGGGAGGAGGAGAT 59.632 52.381 0.00 0.00 0.00 2.75
4406 4514 0.793617 ACTTGGAAGGGAGGAGGAGA 59.206 55.000 0.00 0.00 0.00 3.71
4407 4515 1.199615 GACTTGGAAGGGAGGAGGAG 58.800 60.000 0.00 0.00 0.00 3.69
4408 4516 0.614979 CGACTTGGAAGGGAGGAGGA 60.615 60.000 0.00 0.00 0.00 3.71
4409 4517 1.617947 CCGACTTGGAAGGGAGGAGG 61.618 65.000 0.00 0.00 42.00 4.30
4410 4518 1.901085 CCGACTTGGAAGGGAGGAG 59.099 63.158 0.00 0.00 42.00 3.69
4411 4519 2.291043 GCCGACTTGGAAGGGAGGA 61.291 63.158 0.00 0.00 42.00 3.71
4412 4520 2.269241 GCCGACTTGGAAGGGAGG 59.731 66.667 0.00 0.00 42.00 4.30
4413 4521 2.269241 GGCCGACTTGGAAGGGAG 59.731 66.667 0.00 0.00 42.00 4.30
4414 4522 3.702048 CGGCCGACTTGGAAGGGA 61.702 66.667 24.07 0.00 42.00 4.20
4417 4525 3.976701 ATGGCGGCCGACTTGGAAG 62.977 63.158 34.65 0.00 42.00 3.46
4418 4526 4.028490 ATGGCGGCCGACTTGGAA 62.028 61.111 34.65 12.52 42.00 3.53
4419 4527 4.776322 CATGGCGGCCGACTTGGA 62.776 66.667 33.48 15.42 42.00 3.53
4431 4539 3.880846 CTTCTTCGGCGGCATGGC 61.881 66.667 9.69 9.69 40.44 4.40
4432 4540 1.153449 TACTTCTTCGGCGGCATGG 60.153 57.895 10.53 0.00 0.00 3.66
4433 4541 0.739462 TGTACTTCTTCGGCGGCATG 60.739 55.000 10.53 0.00 0.00 4.06
4434 4542 0.178068 ATGTACTTCTTCGGCGGCAT 59.822 50.000 10.53 0.00 0.00 4.40
4435 4543 0.739462 CATGTACTTCTTCGGCGGCA 60.739 55.000 10.53 0.00 0.00 5.69
4436 4544 1.429148 CCATGTACTTCTTCGGCGGC 61.429 60.000 7.21 0.00 0.00 6.53
4437 4545 0.108329 ACCATGTACTTCTTCGGCGG 60.108 55.000 7.21 0.00 0.00 6.13
4438 4546 1.278238 GACCATGTACTTCTTCGGCG 58.722 55.000 0.00 0.00 0.00 6.46
4439 4547 1.653151 GGACCATGTACTTCTTCGGC 58.347 55.000 0.00 0.00 0.00 5.54
4440 4548 2.311124 GGGACCATGTACTTCTTCGG 57.689 55.000 0.00 0.00 0.00 4.30
4489 4597 3.965539 CTCTGCTTCGGCTGGGTGG 62.966 68.421 0.00 0.00 42.37 4.61
4490 4598 2.435586 CTCTGCTTCGGCTGGGTG 60.436 66.667 0.00 0.00 42.37 4.61
4491 4599 3.710722 CCTCTGCTTCGGCTGGGT 61.711 66.667 0.00 0.00 42.37 4.51
4492 4600 4.479993 CCCTCTGCTTCGGCTGGG 62.480 72.222 0.00 0.00 42.37 4.45
4524 4632 1.153168 CGTTAGACATGCCCAGGGG 60.153 63.158 7.91 3.48 38.57 4.79
4525 4633 1.819632 GCGTTAGACATGCCCAGGG 60.820 63.158 0.00 0.00 0.00 4.45
4526 4634 3.813596 GCGTTAGACATGCCCAGG 58.186 61.111 0.00 0.00 0.00 4.45
4531 4639 1.421410 CCAGTCGGCGTTAGACATGC 61.421 60.000 6.85 0.00 40.84 4.06
4532 4640 0.172578 TCCAGTCGGCGTTAGACATG 59.827 55.000 6.85 0.00 40.84 3.21
4533 4641 0.892755 TTCCAGTCGGCGTTAGACAT 59.107 50.000 6.85 0.00 40.84 3.06
4534 4642 0.242825 CTTCCAGTCGGCGTTAGACA 59.757 55.000 6.85 0.00 40.84 3.41
4535 4643 0.458025 CCTTCCAGTCGGCGTTAGAC 60.458 60.000 6.85 0.00 38.81 2.59
4536 4644 1.888018 CCTTCCAGTCGGCGTTAGA 59.112 57.895 6.85 0.00 0.00 2.10
4537 4645 1.810030 GCCTTCCAGTCGGCGTTAG 60.810 63.158 6.85 0.00 36.45 2.34
4538 4646 2.263540 GCCTTCCAGTCGGCGTTA 59.736 61.111 6.85 0.00 36.45 3.18
4542 4650 4.388499 TTCCGCCTTCCAGTCGGC 62.388 66.667 0.00 0.00 42.65 5.54
4543 4651 2.125512 CTTCCGCCTTCCAGTCGG 60.126 66.667 0.00 0.00 44.16 4.79
4544 4652 1.004918 AACTTCCGCCTTCCAGTCG 60.005 57.895 0.00 0.00 0.00 4.18
4545 4653 0.034896 TGAACTTCCGCCTTCCAGTC 59.965 55.000 0.00 0.00 0.00 3.51
4546 4654 0.035458 CTGAACTTCCGCCTTCCAGT 59.965 55.000 0.00 0.00 0.00 4.00
4547 4655 1.301677 GCTGAACTTCCGCCTTCCAG 61.302 60.000 0.00 0.00 0.00 3.86
4548 4656 1.302511 GCTGAACTTCCGCCTTCCA 60.303 57.895 0.00 0.00 0.00 3.53
4549 4657 2.391389 CGCTGAACTTCCGCCTTCC 61.391 63.158 0.10 0.00 0.00 3.46
4550 4658 3.028366 GCGCTGAACTTCCGCCTTC 62.028 63.158 0.00 0.00 41.72 3.46
4551 4659 3.050275 GCGCTGAACTTCCGCCTT 61.050 61.111 0.00 0.00 41.72 4.35
4556 4664 4.388499 TCCCGGCGCTGAACTTCC 62.388 66.667 20.25 0.00 0.00 3.46
4557 4665 2.815647 CTCCCGGCGCTGAACTTC 60.816 66.667 20.25 0.00 0.00 3.01
4558 4666 4.394712 CCTCCCGGCGCTGAACTT 62.395 66.667 20.25 0.00 0.00 2.66
4568 4676 4.394712 GTGGTGACAGCCTCCCGG 62.395 72.222 1.47 0.00 44.46 5.73
4577 4685 4.293648 CGCCTGTCGGTGGTGACA 62.294 66.667 0.00 0.00 46.15 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.