Multiple sequence alignment - TraesCS1B01G178100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G178100 chr1B 100.000 2542 0 0 1 2542 322723236 322725777 0.000000e+00 4695
1 TraesCS1B01G178100 chr1B 96.101 436 16 1 1089 1524 676248314 676247880 0.000000e+00 710
2 TraesCS1B01G178100 chr6A 88.897 1360 84 18 975 2320 256666558 256665252 0.000000e+00 1613
3 TraesCS1B01G178100 chr2B 95.192 832 27 4 984 1803 99952048 99952878 0.000000e+00 1303
4 TraesCS1B01G178100 chr2B 85.714 322 18 7 2027 2320 99953906 99954227 5.280000e-82 315
5 TraesCS1B01G178100 chr2B 94.253 87 3 2 1803 1888 99952936 99953021 5.710000e-27 132
6 TraesCS1B01G178100 chr2D 92.308 910 47 11 1414 2320 263486762 263487651 0.000000e+00 1271
7 TraesCS1B01G178100 chr2D 94.357 762 30 2 984 1735 63706405 63707163 0.000000e+00 1157
8 TraesCS1B01G178100 chr2D 91.216 444 20 4 751 1177 263479696 263480137 1.010000e-163 586
9 TraesCS1B01G178100 chr2D 86.054 294 24 6 2027 2320 63708874 63709150 1.480000e-77 300
10 TraesCS1B01G178100 chr2D 93.960 149 8 1 1250 1397 263485086 263485234 9.150000e-55 224
11 TraesCS1B01G178100 chr2D 83.471 121 10 8 245 360 118371128 118371013 1.240000e-18 104
12 TraesCS1B01G178100 chr2A 94.153 821 31 7 984 1794 65399477 65400290 0.000000e+00 1234
13 TraesCS1B01G178100 chr2A 90.943 265 22 2 706 969 497420936 497421199 3.110000e-94 355
14 TraesCS1B01G178100 chr2A 87.671 292 20 4 2027 2318 65401429 65401704 2.440000e-85 326
15 TraesCS1B01G178100 chr1D 92.667 300 22 0 414 713 223387752 223388051 1.400000e-117 433
16 TraesCS1B01G178100 chr1D 92.000 300 24 0 414 713 223347963 223348262 3.020000e-114 422
17 TraesCS1B01G178100 chr1D 88.122 362 24 6 1 361 223387392 223387735 1.820000e-111 412
18 TraesCS1B01G178100 chr5D 90.154 325 27 3 708 1030 3557705 3558026 3.910000e-113 418
19 TraesCS1B01G178100 chr5D 81.579 228 42 0 462 689 297996356 297996129 3.340000e-44 189
20 TraesCS1B01G178100 chr5D 80.417 240 47 0 450 689 2613991 2614230 1.550000e-42 183
21 TraesCS1B01G178100 chr5D 83.607 122 15 4 233 350 315479693 315479573 2.670000e-20 110
22 TraesCS1B01G178100 chr5D 83.607 122 15 4 233 350 394541434 394541554 2.670000e-20 110
23 TraesCS1B01G178100 chr1A 88.643 361 15 7 1 361 290344753 290345087 1.410000e-112 416
24 TraesCS1B01G178100 chr1A 89.037 301 30 3 409 709 290345099 290345396 1.110000e-98 370
25 TraesCS1B01G178100 chr1A 89.209 278 27 3 697 972 95531971 95532247 6.730000e-91 344
26 TraesCS1B01G178100 chr5A 91.635 263 19 2 709 970 700577499 700577239 6.690000e-96 361
27 TraesCS1B01G178100 chrUn 90.637 267 20 5 707 970 101400286 101400550 1.450000e-92 350
28 TraesCS1B01G178100 chrUn 89.888 267 20 3 706 970 101578171 101577910 1.130000e-88 337
29 TraesCS1B01G178100 chrUn 81.579 228 42 0 462 689 103116372 103116145 3.340000e-44 189
30 TraesCS1B01G178100 chr7D 90.875 263 19 3 707 964 150763002 150762740 5.200000e-92 348
31 TraesCS1B01G178100 chr7D 81.579 228 42 0 462 689 15073669 15073442 3.340000e-44 189
32 TraesCS1B01G178100 chr7D 80.417 240 47 0 450 689 117218236 117218475 1.550000e-42 183
33 TraesCS1B01G178100 chr7D 82.787 122 16 4 233 350 604870513 604870393 1.240000e-18 104
34 TraesCS1B01G178100 chr4A 90.909 264 17 4 707 969 741250626 741250883 5.200000e-92 348
35 TraesCS1B01G178100 chr4B 83.108 296 46 4 420 712 383651781 383652075 1.500000e-67 267
36 TraesCS1B01G178100 chr6D 83.607 122 15 4 233 350 8569406 8569286 2.670000e-20 110
37 TraesCS1B01G178100 chr3D 82.787 122 16 4 233 350 573677163 573677283 1.240000e-18 104
38 TraesCS1B01G178100 chr6B 81.203 133 18 6 223 349 646199544 646199413 1.610000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G178100 chr1B 322723236 322725777 2541 False 4695.000000 4695 100.000000 1 2542 1 chr1B.!!$F1 2541
1 TraesCS1B01G178100 chr6A 256665252 256666558 1306 True 1613.000000 1613 88.897000 975 2320 1 chr6A.!!$R1 1345
2 TraesCS1B01G178100 chr2B 99952048 99954227 2179 False 583.333333 1303 91.719667 984 2320 3 chr2B.!!$F1 1336
3 TraesCS1B01G178100 chr2D 263485086 263487651 2565 False 747.500000 1271 93.134000 1250 2320 2 chr2D.!!$F3 1070
4 TraesCS1B01G178100 chr2D 63706405 63709150 2745 False 728.500000 1157 90.205500 984 2320 2 chr2D.!!$F2 1336
5 TraesCS1B01G178100 chr2A 65399477 65401704 2227 False 780.000000 1234 90.912000 984 2318 2 chr2A.!!$F2 1334
6 TraesCS1B01G178100 chr1D 223387392 223388051 659 False 422.500000 433 90.394500 1 713 2 chr1D.!!$F2 712
7 TraesCS1B01G178100 chr1A 290344753 290345396 643 False 393.000000 416 88.840000 1 709 2 chr1A.!!$F2 708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
808 809 0.035056 CACCAACCTTGCTCTAGGGG 60.035 60.0 0.0 0.0 39.76 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2424 5874 0.032952 ACCGAGTTAGCAGAAACGCA 59.967 50.0 0.0 0.0 34.46 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 4.709886 AGAGTTTGTTTAACCACTTTGGCT 59.290 37.500 0.00 0.00 42.67 4.75
77 78 2.163818 TAACCACTTTGGCTGACGAG 57.836 50.000 0.00 0.00 42.67 4.18
78 79 0.180406 AACCACTTTGGCTGACGAGT 59.820 50.000 0.00 0.00 42.67 4.18
79 80 0.249911 ACCACTTTGGCTGACGAGTC 60.250 55.000 0.00 0.00 42.67 3.36
80 81 0.249868 CCACTTTGGCTGACGAGTCA 60.250 55.000 5.76 5.76 38.06 3.41
81 82 0.861837 CACTTTGGCTGACGAGTCAC 59.138 55.000 1.24 0.29 31.94 3.67
82 83 0.753262 ACTTTGGCTGACGAGTCACT 59.247 50.000 1.24 0.00 31.94 3.41
83 84 1.139058 ACTTTGGCTGACGAGTCACTT 59.861 47.619 1.24 0.00 31.94 3.16
84 85 2.213499 CTTTGGCTGACGAGTCACTTT 58.787 47.619 1.24 0.00 31.94 2.66
85 86 1.581934 TTGGCTGACGAGTCACTTTG 58.418 50.000 1.24 0.00 31.94 2.77
86 87 0.249868 TGGCTGACGAGTCACTTTGG 60.250 55.000 1.24 0.00 35.46 3.28
87 88 1.569479 GGCTGACGAGTCACTTTGGC 61.569 60.000 1.24 4.07 35.46 4.52
88 89 1.569479 GCTGACGAGTCACTTTGGCC 61.569 60.000 0.00 0.00 35.46 5.36
89 90 1.284982 CTGACGAGTCACTTTGGCCG 61.285 60.000 1.24 0.00 35.46 6.13
90 91 1.006571 GACGAGTCACTTTGGCCGA 60.007 57.895 0.00 0.00 0.00 5.54
91 92 0.389948 GACGAGTCACTTTGGCCGAT 60.390 55.000 0.00 0.00 0.00 4.18
92 93 0.670546 ACGAGTCACTTTGGCCGATG 60.671 55.000 0.00 0.15 0.00 3.84
93 94 1.361668 CGAGTCACTTTGGCCGATGG 61.362 60.000 10.52 1.73 0.00 3.51
112 113 5.180680 CGATGGGTCACTCGTAGATTATGTA 59.819 44.000 0.00 0.00 33.89 2.29
122 123 8.172484 CACTCGTAGATTATGTAGATGAGCTAC 58.828 40.741 9.28 9.28 42.80 3.58
146 147 2.052782 TCTCGGGTCTGATCGATTGA 57.947 50.000 0.00 0.00 34.77 2.57
168 169 7.979115 TGAGGTCGTGTTTTCTTTTTATTTG 57.021 32.000 0.00 0.00 0.00 2.32
190 191 5.769367 TGTATTAGTGTCCTGTATCGATGC 58.231 41.667 8.54 7.48 0.00 3.91
211 212 3.975035 GCCTTCAACTTGATTCACGTTTC 59.025 43.478 5.84 0.00 0.00 2.78
374 375 3.243336 GCGGTAGCATCCTAGTATTTCG 58.757 50.000 0.00 0.00 44.35 3.46
375 376 3.243336 CGGTAGCATCCTAGTATTTCGC 58.757 50.000 0.00 0.00 0.00 4.70
376 377 3.057456 CGGTAGCATCCTAGTATTTCGCT 60.057 47.826 0.00 0.00 0.00 4.93
377 378 4.487019 GGTAGCATCCTAGTATTTCGCTC 58.513 47.826 0.00 0.00 0.00 5.03
378 379 4.022242 GGTAGCATCCTAGTATTTCGCTCA 60.022 45.833 0.00 0.00 0.00 4.26
379 380 3.983741 AGCATCCTAGTATTTCGCTCAC 58.016 45.455 0.00 0.00 0.00 3.51
380 381 3.384789 AGCATCCTAGTATTTCGCTCACA 59.615 43.478 0.00 0.00 0.00 3.58
381 382 3.491267 GCATCCTAGTATTTCGCTCACAC 59.509 47.826 0.00 0.00 0.00 3.82
382 383 3.795623 TCCTAGTATTTCGCTCACACC 57.204 47.619 0.00 0.00 0.00 4.16
383 384 3.093814 TCCTAGTATTTCGCTCACACCA 58.906 45.455 0.00 0.00 0.00 4.17
384 385 3.512329 TCCTAGTATTTCGCTCACACCAA 59.488 43.478 0.00 0.00 0.00 3.67
385 386 3.865745 CCTAGTATTTCGCTCACACCAAG 59.134 47.826 0.00 0.00 0.00 3.61
386 387 3.402628 AGTATTTCGCTCACACCAAGT 57.597 42.857 0.00 0.00 0.00 3.16
395 396 3.737127 CACACCAAGTGCTTTGCAA 57.263 47.368 0.00 0.00 41.47 4.08
396 397 1.280066 CACACCAAGTGCTTTGCAAC 58.720 50.000 0.00 0.00 41.47 4.17
397 398 0.179140 ACACCAAGTGCTTTGCAACG 60.179 50.000 0.00 0.00 41.47 4.10
398 399 0.871163 CACCAAGTGCTTTGCAACGG 60.871 55.000 0.00 0.00 41.47 4.44
399 400 1.950630 CCAAGTGCTTTGCAACGGC 60.951 57.895 14.45 14.45 41.47 5.68
400 401 2.026014 AAGTGCTTTGCAACGGCG 59.974 55.556 4.80 4.80 45.35 6.46
401 402 3.483235 AAGTGCTTTGCAACGGCGG 62.483 57.895 13.24 0.00 45.35 6.13
402 403 4.264638 GTGCTTTGCAACGGCGGT 62.265 61.111 13.24 0.00 45.35 5.68
403 404 2.592001 TGCTTTGCAACGGCGGTA 60.592 55.556 13.24 0.00 45.35 4.02
404 405 2.175811 GCTTTGCAACGGCGGTAG 59.824 61.111 13.24 0.00 45.35 3.18
405 406 2.175811 CTTTGCAACGGCGGTAGC 59.824 61.111 13.24 12.20 45.35 3.58
443 444 5.933617 TGTTGGAGAGAATGATGATTAGGG 58.066 41.667 0.00 0.00 0.00 3.53
551 552 2.613691 GGTTTGCCGTATTCTTCTCGA 58.386 47.619 0.00 0.00 0.00 4.04
612 613 2.146342 CCAACGAGAAGTGTCAATGCT 58.854 47.619 0.00 0.00 0.00 3.79
665 666 0.620556 AAGCCTCATGGTGAACCGAT 59.379 50.000 0.00 0.00 39.43 4.18
666 667 0.107508 AGCCTCATGGTGAACCGATG 60.108 55.000 0.00 1.05 39.43 3.84
673 674 1.974265 TGGTGAACCGATGCTTGAAA 58.026 45.000 0.00 0.00 39.43 2.69
677 678 3.243401 GGTGAACCGATGCTTGAAAAAGT 60.243 43.478 0.00 0.00 0.00 2.66
709 710 5.345741 CACCAATTCCACGATTTGCTTAAAG 59.654 40.000 0.00 0.00 0.00 1.85
713 714 6.817765 ATTCCACGATTTGCTTAAAGAGAA 57.182 33.333 0.00 0.00 0.00 2.87
714 715 6.627395 TTCCACGATTTGCTTAAAGAGAAA 57.373 33.333 0.00 0.00 0.00 2.52
715 716 6.627395 TCCACGATTTGCTTAAAGAGAAAA 57.373 33.333 0.00 0.00 37.31 2.29
716 717 7.033530 TCCACGATTTGCTTAAAGAGAAAAA 57.966 32.000 0.00 0.00 36.48 1.94
717 718 7.657336 TCCACGATTTGCTTAAAGAGAAAAAT 58.343 30.769 0.00 0.00 36.48 1.82
718 719 8.141268 TCCACGATTTGCTTAAAGAGAAAAATT 58.859 29.630 0.00 0.00 36.48 1.82
719 720 8.427774 CCACGATTTGCTTAAAGAGAAAAATTC 58.572 33.333 0.00 0.00 36.48 2.17
720 721 8.967218 CACGATTTGCTTAAAGAGAAAAATTCA 58.033 29.630 0.00 0.00 36.48 2.57
721 722 8.968242 ACGATTTGCTTAAAGAGAAAAATTCAC 58.032 29.630 0.00 0.00 36.48 3.18
722 723 9.185192 CGATTTGCTTAAAGAGAAAAATTCACT 57.815 29.630 0.00 0.00 36.48 3.41
726 727 9.950680 TTGCTTAAAGAGAAAAATTCACTACAG 57.049 29.630 0.00 0.00 30.22 2.74
727 728 8.567948 TGCTTAAAGAGAAAAATTCACTACAGG 58.432 33.333 0.00 0.00 30.22 4.00
728 729 8.568794 GCTTAAAGAGAAAAATTCACTACAGGT 58.431 33.333 0.00 0.00 30.22 4.00
730 731 7.511959 AAAGAGAAAAATTCACTACAGGTCC 57.488 36.000 0.00 0.00 30.22 4.46
731 732 6.441088 AGAGAAAAATTCACTACAGGTCCT 57.559 37.500 0.00 0.00 0.00 3.85
732 733 7.554959 AGAGAAAAATTCACTACAGGTCCTA 57.445 36.000 0.00 0.00 0.00 2.94
733 734 8.152023 AGAGAAAAATTCACTACAGGTCCTAT 57.848 34.615 0.00 0.00 0.00 2.57
734 735 8.606830 AGAGAAAAATTCACTACAGGTCCTATT 58.393 33.333 0.00 0.00 0.00 1.73
735 736 9.886132 GAGAAAAATTCACTACAGGTCCTATTA 57.114 33.333 0.00 0.00 0.00 0.98
736 737 9.668497 AGAAAAATTCACTACAGGTCCTATTAC 57.332 33.333 0.00 0.00 0.00 1.89
737 738 9.668497 GAAAAATTCACTACAGGTCCTATTACT 57.332 33.333 0.00 0.00 0.00 2.24
739 740 9.449719 AAAATTCACTACAGGTCCTATTACTTG 57.550 33.333 0.00 0.00 33.01 3.16
740 741 5.593679 TCACTACAGGTCCTATTACTTGC 57.406 43.478 0.00 0.00 30.00 4.01
741 742 4.097437 TCACTACAGGTCCTATTACTTGCG 59.903 45.833 0.00 0.00 30.00 4.85
742 743 2.311124 ACAGGTCCTATTACTTGCGC 57.689 50.000 0.00 0.00 30.00 6.09
743 744 1.831736 ACAGGTCCTATTACTTGCGCT 59.168 47.619 9.73 0.00 30.00 5.92
744 745 2.205074 CAGGTCCTATTACTTGCGCTG 58.795 52.381 9.73 3.92 0.00 5.18
745 746 1.139058 AGGTCCTATTACTTGCGCTGG 59.861 52.381 9.73 3.50 0.00 4.85
746 747 1.134491 GGTCCTATTACTTGCGCTGGT 60.134 52.381 9.73 10.06 0.00 4.00
747 748 1.933853 GTCCTATTACTTGCGCTGGTG 59.066 52.381 9.73 0.00 0.00 4.17
748 749 0.657840 CCTATTACTTGCGCTGGTGC 59.342 55.000 9.73 0.00 0.00 5.01
749 750 0.657840 CTATTACTTGCGCTGGTGCC 59.342 55.000 9.73 0.00 35.36 5.01
750 751 0.035915 TATTACTTGCGCTGGTGCCA 60.036 50.000 9.73 0.00 35.36 4.92
751 752 1.308069 ATTACTTGCGCTGGTGCCAG 61.308 55.000 9.73 13.59 46.15 4.85
760 761 2.859992 CTGGTGCCAGCTTTAGTCC 58.140 57.895 5.19 0.00 37.24 3.85
761 762 0.678048 CTGGTGCCAGCTTTAGTCCC 60.678 60.000 5.19 0.00 37.24 4.46
762 763 1.133809 TGGTGCCAGCTTTAGTCCCT 61.134 55.000 0.00 0.00 0.00 4.20
763 764 0.678048 GGTGCCAGCTTTAGTCCCTG 60.678 60.000 0.00 0.00 0.00 4.45
764 765 0.036875 GTGCCAGCTTTAGTCCCTGT 59.963 55.000 0.00 0.00 0.00 4.00
765 766 0.036732 TGCCAGCTTTAGTCCCTGTG 59.963 55.000 0.00 0.00 0.00 3.66
766 767 0.678048 GCCAGCTTTAGTCCCTGTGG 60.678 60.000 0.00 0.00 0.00 4.17
767 768 0.693049 CCAGCTTTAGTCCCTGTGGT 59.307 55.000 0.00 0.00 0.00 4.16
768 769 1.073923 CCAGCTTTAGTCCCTGTGGTT 59.926 52.381 0.00 0.00 0.00 3.67
769 770 2.304761 CCAGCTTTAGTCCCTGTGGTTA 59.695 50.000 0.00 0.00 0.00 2.85
770 771 3.335579 CAGCTTTAGTCCCTGTGGTTAC 58.664 50.000 0.00 0.00 0.00 2.50
771 772 2.976882 AGCTTTAGTCCCTGTGGTTACA 59.023 45.455 0.00 0.00 35.08 2.41
772 773 3.393278 AGCTTTAGTCCCTGTGGTTACAA 59.607 43.478 0.00 0.00 36.14 2.41
773 774 4.139038 GCTTTAGTCCCTGTGGTTACAAA 58.861 43.478 0.00 0.00 36.14 2.83
774 775 4.765339 GCTTTAGTCCCTGTGGTTACAAAT 59.235 41.667 0.00 0.00 36.14 2.32
775 776 5.941647 GCTTTAGTCCCTGTGGTTACAAATA 59.058 40.000 0.00 0.00 36.14 1.40
776 777 6.128090 GCTTTAGTCCCTGTGGTTACAAATAC 60.128 42.308 0.00 0.00 36.14 1.89
777 778 4.296621 AGTCCCTGTGGTTACAAATACC 57.703 45.455 0.00 0.00 36.14 2.73
778 779 3.009805 AGTCCCTGTGGTTACAAATACCC 59.990 47.826 0.00 0.00 36.14 3.69
779 780 2.027007 TCCCTGTGGTTACAAATACCCG 60.027 50.000 0.00 0.00 36.14 5.28
780 781 2.027007 CCCTGTGGTTACAAATACCCGA 60.027 50.000 0.00 0.00 36.14 5.14
781 782 3.559597 CCCTGTGGTTACAAATACCCGAA 60.560 47.826 0.00 0.00 36.14 4.30
782 783 4.073549 CCTGTGGTTACAAATACCCGAAA 58.926 43.478 0.00 0.00 36.14 3.46
783 784 4.703093 CCTGTGGTTACAAATACCCGAAAT 59.297 41.667 0.00 0.00 36.14 2.17
784 785 5.881443 CCTGTGGTTACAAATACCCGAAATA 59.119 40.000 0.00 0.00 36.14 1.40
785 786 6.183360 CCTGTGGTTACAAATACCCGAAATAC 60.183 42.308 0.00 0.00 36.14 1.89
786 787 6.236409 TGTGGTTACAAATACCCGAAATACA 58.764 36.000 0.00 0.00 34.66 2.29
787 788 6.372103 TGTGGTTACAAATACCCGAAATACAG 59.628 38.462 0.00 0.00 34.66 2.74
788 789 6.372381 GTGGTTACAAATACCCGAAATACAGT 59.628 38.462 0.00 0.00 34.66 3.55
789 790 6.594937 TGGTTACAAATACCCGAAATACAGTC 59.405 38.462 0.00 0.00 34.66 3.51
790 791 6.594937 GGTTACAAATACCCGAAATACAGTCA 59.405 38.462 0.00 0.00 0.00 3.41
791 792 7.413328 GGTTACAAATACCCGAAATACAGTCAC 60.413 40.741 0.00 0.00 0.00 3.67
792 793 4.939439 ACAAATACCCGAAATACAGTCACC 59.061 41.667 0.00 0.00 0.00 4.02
793 794 4.829872 AATACCCGAAATACAGTCACCA 57.170 40.909 0.00 0.00 0.00 4.17
794 795 4.829872 ATACCCGAAATACAGTCACCAA 57.170 40.909 0.00 0.00 0.00 3.67
795 796 2.774687 ACCCGAAATACAGTCACCAAC 58.225 47.619 0.00 0.00 0.00 3.77
796 797 2.081462 CCCGAAATACAGTCACCAACC 58.919 52.381 0.00 0.00 0.00 3.77
797 798 2.290071 CCCGAAATACAGTCACCAACCT 60.290 50.000 0.00 0.00 0.00 3.50
798 799 3.408634 CCGAAATACAGTCACCAACCTT 58.591 45.455 0.00 0.00 0.00 3.50
799 800 3.188460 CCGAAATACAGTCACCAACCTTG 59.812 47.826 0.00 0.00 0.00 3.61
800 801 3.364964 CGAAATACAGTCACCAACCTTGC 60.365 47.826 0.00 0.00 0.00 4.01
801 802 3.508845 AATACAGTCACCAACCTTGCT 57.491 42.857 0.00 0.00 0.00 3.91
802 803 2.543777 TACAGTCACCAACCTTGCTC 57.456 50.000 0.00 0.00 0.00 4.26
803 804 0.839946 ACAGTCACCAACCTTGCTCT 59.160 50.000 0.00 0.00 0.00 4.09
804 805 2.047061 ACAGTCACCAACCTTGCTCTA 58.953 47.619 0.00 0.00 0.00 2.43
805 806 2.037772 ACAGTCACCAACCTTGCTCTAG 59.962 50.000 0.00 0.00 0.00 2.43
806 807 1.625818 AGTCACCAACCTTGCTCTAGG 59.374 52.381 0.00 0.00 41.31 3.02
807 808 0.984230 TCACCAACCTTGCTCTAGGG 59.016 55.000 2.69 0.00 39.76 3.53
808 809 0.035056 CACCAACCTTGCTCTAGGGG 60.035 60.000 0.00 0.00 39.76 4.79
809 810 1.077429 CCAACCTTGCTCTAGGGGC 60.077 63.158 0.00 0.00 39.76 5.80
810 811 1.077429 CAACCTTGCTCTAGGGGCC 60.077 63.158 0.00 0.00 39.76 5.80
811 812 1.541368 AACCTTGCTCTAGGGGCCA 60.541 57.895 4.39 0.00 39.76 5.36
812 813 0.921256 AACCTTGCTCTAGGGGCCAT 60.921 55.000 4.39 0.00 39.76 4.40
813 814 1.348775 ACCTTGCTCTAGGGGCCATC 61.349 60.000 4.39 0.00 39.76 3.51
814 815 1.059006 CCTTGCTCTAGGGGCCATCT 61.059 60.000 4.39 3.73 0.00 2.90
815 816 1.722034 CTTGCTCTAGGGGCCATCTA 58.278 55.000 4.39 4.89 0.00 1.98
816 817 1.346068 CTTGCTCTAGGGGCCATCTAC 59.654 57.143 4.39 0.00 0.00 2.59
817 818 0.827925 TGCTCTAGGGGCCATCTACG 60.828 60.000 4.39 0.91 0.00 3.51
818 819 1.536943 GCTCTAGGGGCCATCTACGG 61.537 65.000 4.39 0.90 0.00 4.02
819 820 0.178958 CTCTAGGGGCCATCTACGGT 60.179 60.000 4.39 0.00 0.00 4.83
820 821 0.178970 TCTAGGGGCCATCTACGGTC 60.179 60.000 4.39 0.00 0.00 4.79
828 829 3.858247 GGCCATCTACGGTCCATTATAC 58.142 50.000 0.00 0.00 0.00 1.47
829 830 3.508762 GCCATCTACGGTCCATTATACG 58.491 50.000 0.00 0.00 0.00 3.06
830 831 3.675228 GCCATCTACGGTCCATTATACGG 60.675 52.174 0.00 0.00 0.00 4.02
831 832 3.508793 CCATCTACGGTCCATTATACGGT 59.491 47.826 0.00 0.00 35.04 4.83
832 833 4.021719 CCATCTACGGTCCATTATACGGTT 60.022 45.833 0.00 0.00 33.18 4.44
833 834 5.510179 CCATCTACGGTCCATTATACGGTTT 60.510 44.000 0.00 0.00 33.18 3.27
834 835 5.596836 TCTACGGTCCATTATACGGTTTT 57.403 39.130 0.00 0.00 33.18 2.43
835 836 5.350633 TCTACGGTCCATTATACGGTTTTG 58.649 41.667 0.00 0.00 33.18 2.44
836 837 3.941573 ACGGTCCATTATACGGTTTTGT 58.058 40.909 0.00 0.00 0.00 2.83
837 838 3.685756 ACGGTCCATTATACGGTTTTGTG 59.314 43.478 0.00 0.00 0.00 3.33
838 839 3.685756 CGGTCCATTATACGGTTTTGTGT 59.314 43.478 0.00 0.00 0.00 3.72
839 840 4.869297 CGGTCCATTATACGGTTTTGTGTA 59.131 41.667 0.00 0.00 0.00 2.90
840 841 5.220453 CGGTCCATTATACGGTTTTGTGTAC 60.220 44.000 0.00 0.00 0.00 2.90
841 842 5.220453 GGTCCATTATACGGTTTTGTGTACG 60.220 44.000 0.00 0.00 0.00 3.67
842 843 5.348451 GTCCATTATACGGTTTTGTGTACGT 59.652 40.000 0.00 0.00 42.71 3.57
843 844 6.529829 GTCCATTATACGGTTTTGTGTACGTA 59.470 38.462 0.00 0.00 44.51 3.57
845 846 8.409371 TCCATTATACGGTTTTGTGTACGTATA 58.591 33.333 10.58 10.58 46.77 1.47
849 850 4.819769 ACGGTTTTGTGTACGTATATGGT 58.180 39.130 0.00 0.00 37.85 3.55
850 851 4.626604 ACGGTTTTGTGTACGTATATGGTG 59.373 41.667 0.00 0.00 37.85 4.17
851 852 4.863689 CGGTTTTGTGTACGTATATGGTGA 59.136 41.667 0.00 0.00 0.00 4.02
852 853 5.005012 CGGTTTTGTGTACGTATATGGTGAG 59.995 44.000 0.00 0.00 0.00 3.51
853 854 5.220529 GGTTTTGTGTACGTATATGGTGAGC 60.221 44.000 0.00 0.00 0.00 4.26
854 855 4.994907 TTGTGTACGTATATGGTGAGCT 57.005 40.909 0.00 0.00 0.00 4.09
855 856 4.301637 TGTGTACGTATATGGTGAGCTG 57.698 45.455 0.00 0.00 0.00 4.24
856 857 3.067601 TGTGTACGTATATGGTGAGCTGG 59.932 47.826 0.00 0.00 0.00 4.85
857 858 2.035449 TGTACGTATATGGTGAGCTGGC 59.965 50.000 0.00 0.00 0.00 4.85
858 859 1.414158 ACGTATATGGTGAGCTGGCT 58.586 50.000 0.00 0.00 0.00 4.75
859 860 1.341531 ACGTATATGGTGAGCTGGCTC 59.658 52.381 14.86 14.86 43.01 4.70
860 861 1.615883 CGTATATGGTGAGCTGGCTCT 59.384 52.381 20.97 5.86 43.12 4.09
861 862 2.820197 CGTATATGGTGAGCTGGCTCTA 59.180 50.000 20.97 7.71 43.12 2.43
862 863 3.119673 CGTATATGGTGAGCTGGCTCTAG 60.120 52.174 20.97 0.00 43.12 2.43
863 864 2.461300 TATGGTGAGCTGGCTCTAGT 57.539 50.000 20.97 9.05 43.12 2.57
864 865 1.118838 ATGGTGAGCTGGCTCTAGTC 58.881 55.000 20.97 10.25 43.12 2.59
865 866 0.251787 TGGTGAGCTGGCTCTAGTCA 60.252 55.000 20.97 11.89 43.12 3.41
866 867 0.898320 GGTGAGCTGGCTCTAGTCAA 59.102 55.000 20.97 0.00 43.12 3.18
867 868 1.404851 GGTGAGCTGGCTCTAGTCAAC 60.405 57.143 20.97 10.91 43.12 3.18
868 869 0.898320 TGAGCTGGCTCTAGTCAACC 59.102 55.000 20.97 0.00 43.12 3.77
869 870 0.179124 GAGCTGGCTCTAGTCAACCG 60.179 60.000 14.51 0.00 39.80 4.44
870 871 0.612174 AGCTGGCTCTAGTCAACCGA 60.612 55.000 0.00 0.00 0.00 4.69
871 872 0.461961 GCTGGCTCTAGTCAACCGAT 59.538 55.000 0.00 0.00 0.00 4.18
872 873 1.804372 GCTGGCTCTAGTCAACCGATG 60.804 57.143 0.00 0.00 0.00 3.84
873 874 0.175760 TGGCTCTAGTCAACCGATGC 59.824 55.000 0.00 0.00 0.00 3.91
874 875 0.530870 GGCTCTAGTCAACCGATGCC 60.531 60.000 0.00 0.00 0.00 4.40
875 876 0.175760 GCTCTAGTCAACCGATGCCA 59.824 55.000 0.00 0.00 0.00 4.92
876 877 1.405526 GCTCTAGTCAACCGATGCCAA 60.406 52.381 0.00 0.00 0.00 4.52
877 878 2.544685 CTCTAGTCAACCGATGCCAAG 58.455 52.381 0.00 0.00 0.00 3.61
878 879 1.899814 TCTAGTCAACCGATGCCAAGT 59.100 47.619 0.00 0.00 0.00 3.16
879 880 2.002586 CTAGTCAACCGATGCCAAGTG 58.997 52.381 0.00 0.00 0.00 3.16
880 881 0.108585 AGTCAACCGATGCCAAGTGT 59.891 50.000 0.00 0.00 0.00 3.55
881 882 0.238289 GTCAACCGATGCCAAGTGTG 59.762 55.000 0.00 0.00 0.00 3.82
882 883 1.081242 CAACCGATGCCAAGTGTGC 60.081 57.895 0.00 0.00 0.00 4.57
883 884 1.528076 AACCGATGCCAAGTGTGCA 60.528 52.632 0.00 0.00 43.97 4.57
889 890 1.624336 ATGCCAAGTGTGCATTGACT 58.376 45.000 0.01 0.00 46.91 3.41
890 891 0.669619 TGCCAAGTGTGCATTGACTG 59.330 50.000 0.01 0.00 32.85 3.51
891 892 4.542833 ATGCCAAGTGTGCATTGACTGC 62.543 50.000 0.01 0.73 46.91 4.40
899 900 3.411808 GCATTGACTGCCACATGTG 57.588 52.632 19.31 19.31 45.66 3.21
900 901 0.734942 GCATTGACTGCCACATGTGC 60.735 55.000 20.81 15.64 45.66 4.57
901 902 0.108992 CATTGACTGCCACATGTGCC 60.109 55.000 20.81 10.49 0.00 5.01
902 903 1.252904 ATTGACTGCCACATGTGCCC 61.253 55.000 20.81 13.31 0.00 5.36
903 904 2.282391 GACTGCCACATGTGCCCA 60.282 61.111 20.81 16.96 0.00 5.36
904 905 2.282674 ACTGCCACATGTGCCCAG 60.283 61.111 28.58 28.58 35.75 4.45
905 906 3.755628 CTGCCACATGTGCCCAGC 61.756 66.667 20.81 17.72 0.00 4.85
906 907 4.289101 TGCCACATGTGCCCAGCT 62.289 61.111 20.81 0.00 0.00 4.24
907 908 3.446570 GCCACATGTGCCCAGCTC 61.447 66.667 20.81 0.00 0.00 4.09
908 909 2.034532 CCACATGTGCCCAGCTCA 59.965 61.111 20.81 0.00 36.50 4.26
909 910 2.338015 CCACATGTGCCCAGCTCAC 61.338 63.158 20.81 0.00 34.91 3.51
910 911 1.303074 CACATGTGCCCAGCTCACT 60.303 57.895 13.94 0.00 34.91 3.41
911 912 1.002868 ACATGTGCCCAGCTCACTC 60.003 57.895 0.00 0.00 34.91 3.51
912 913 2.104859 CATGTGCCCAGCTCACTCG 61.105 63.158 5.71 0.00 34.91 4.18
913 914 2.285773 ATGTGCCCAGCTCACTCGA 61.286 57.895 5.71 0.00 34.91 4.04
914 915 1.830587 ATGTGCCCAGCTCACTCGAA 61.831 55.000 5.71 0.00 34.91 3.71
915 916 1.078848 GTGCCCAGCTCACTCGAAT 60.079 57.895 0.00 0.00 0.00 3.34
916 917 0.175760 GTGCCCAGCTCACTCGAATA 59.824 55.000 0.00 0.00 0.00 1.75
917 918 0.175760 TGCCCAGCTCACTCGAATAC 59.824 55.000 0.00 0.00 0.00 1.89
918 919 0.872021 GCCCAGCTCACTCGAATACG 60.872 60.000 0.00 0.00 41.26 3.06
919 920 0.872021 CCCAGCTCACTCGAATACGC 60.872 60.000 0.00 0.00 39.58 4.42
920 921 0.179137 CCAGCTCACTCGAATACGCA 60.179 55.000 0.00 0.00 39.58 5.24
921 922 1.536922 CCAGCTCACTCGAATACGCAT 60.537 52.381 0.00 0.00 39.58 4.73
922 923 1.520174 CAGCTCACTCGAATACGCATG 59.480 52.381 0.00 0.00 39.58 4.06
923 924 0.230769 GCTCACTCGAATACGCATGC 59.769 55.000 7.91 7.91 39.58 4.06
924 925 1.559831 CTCACTCGAATACGCATGCA 58.440 50.000 19.57 0.00 39.58 3.96
925 926 1.256376 CTCACTCGAATACGCATGCAC 59.744 52.381 19.57 2.33 39.58 4.57
926 927 0.043907 CACTCGAATACGCATGCACG 60.044 55.000 19.57 14.00 39.58 5.34
927 928 1.084037 CTCGAATACGCATGCACGC 60.084 57.895 19.57 0.00 39.58 5.34
928 929 1.751536 CTCGAATACGCATGCACGCA 61.752 55.000 19.57 0.00 39.58 5.24
929 930 1.366844 CGAATACGCATGCACGCAG 60.367 57.895 19.57 2.94 36.19 5.18
931 932 0.096976 GAATACGCATGCACGCAGTT 59.903 50.000 19.57 3.04 41.61 3.16
932 933 0.521291 AATACGCATGCACGCAGTTT 59.479 45.000 19.57 0.00 41.61 2.66
933 934 0.521291 ATACGCATGCACGCAGTTTT 59.479 45.000 19.57 0.00 41.61 2.43
934 935 0.309302 TACGCATGCACGCAGTTTTT 59.691 45.000 19.57 0.00 41.61 1.94
970 971 9.657419 CAAAATTGCCAGTAATTAAAAGATCCT 57.343 29.630 0.00 0.00 30.47 3.24
971 972 9.875691 AAAATTGCCAGTAATTAAAAGATCCTC 57.124 29.630 0.00 0.00 30.47 3.71
972 973 8.593945 AATTGCCAGTAATTAAAAGATCCTCA 57.406 30.769 0.00 0.00 0.00 3.86
973 974 8.593945 ATTGCCAGTAATTAAAAGATCCTCAA 57.406 30.769 0.00 0.00 0.00 3.02
974 975 8.415950 TTGCCAGTAATTAAAAGATCCTCAAA 57.584 30.769 0.00 0.00 0.00 2.69
975 976 7.826690 TGCCAGTAATTAAAAGATCCTCAAAC 58.173 34.615 0.00 0.00 0.00 2.93
976 977 7.093945 TGCCAGTAATTAAAAGATCCTCAAACC 60.094 37.037 0.00 0.00 0.00 3.27
977 978 7.630728 GCCAGTAATTAAAAGATCCTCAAACCC 60.631 40.741 0.00 0.00 0.00 4.11
978 979 7.147897 CCAGTAATTAAAAGATCCTCAAACCCC 60.148 40.741 0.00 0.00 0.00 4.95
979 980 5.914898 AATTAAAAGATCCTCAAACCCCG 57.085 39.130 0.00 0.00 0.00 5.73
982 983 2.513897 GATCCTCAAACCCCGCCG 60.514 66.667 0.00 0.00 0.00 6.46
1346 1357 0.741221 GCTCGTTCCTCTTCGGCAAT 60.741 55.000 0.00 0.00 0.00 3.56
1627 3163 2.758423 GCGTGAATTTAGGGACCCAATT 59.242 45.455 14.60 10.92 0.00 2.32
1711 3247 6.596309 ATTGAGTATGAGATGAGGCGATTA 57.404 37.500 0.00 0.00 0.00 1.75
1743 3279 5.350365 TCGGTGATAATTGGTCTTTTTCTCG 59.650 40.000 0.00 0.00 0.00 4.04
1778 3930 6.878389 GCACTAAATGGGAATTTTTGGATCAA 59.122 34.615 0.00 0.00 0.00 2.57
1888 4289 4.716784 AGAAGTATGGTGCATCACTTAGGA 59.283 41.667 0.00 0.00 34.40 2.94
1890 4291 5.636903 AGTATGGTGCATCACTTAGGATT 57.363 39.130 0.00 0.00 34.40 3.01
1893 4294 7.164122 AGTATGGTGCATCACTTAGGATTATG 58.836 38.462 0.00 0.00 34.40 1.90
1894 4295 5.372343 TGGTGCATCACTTAGGATTATGT 57.628 39.130 0.00 0.00 34.40 2.29
1895 4296 5.125356 TGGTGCATCACTTAGGATTATGTG 58.875 41.667 0.00 0.00 36.68 3.21
1896 4297 4.516698 GGTGCATCACTTAGGATTATGTGG 59.483 45.833 0.00 0.00 36.26 4.17
1897 4298 5.368145 GTGCATCACTTAGGATTATGTGGA 58.632 41.667 0.00 0.00 36.26 4.02
1898 4299 6.000219 GTGCATCACTTAGGATTATGTGGAT 59.000 40.000 0.00 0.00 36.26 3.41
1899 4300 6.488006 GTGCATCACTTAGGATTATGTGGATT 59.512 38.462 0.00 0.00 36.26 3.01
1900 4301 6.487668 TGCATCACTTAGGATTATGTGGATTG 59.512 38.462 0.00 0.00 36.26 2.67
1902 4303 7.229306 GCATCACTTAGGATTATGTGGATTGAA 59.771 37.037 0.00 0.00 36.26 2.69
1903 4304 9.293404 CATCACTTAGGATTATGTGGATTGAAT 57.707 33.333 0.00 0.00 36.26 2.57
1904 4305 9.872684 ATCACTTAGGATTATGTGGATTGAATT 57.127 29.630 0.00 0.00 36.26 2.17
1905 4306 9.123902 TCACTTAGGATTATGTGGATTGAATTG 57.876 33.333 0.00 0.00 36.26 2.32
1906 4307 9.123902 CACTTAGGATTATGTGGATTGAATTGA 57.876 33.333 0.00 0.00 33.53 2.57
1907 4308 9.872684 ACTTAGGATTATGTGGATTGAATTGAT 57.127 29.630 0.00 0.00 0.00 2.57
1909 4310 9.865152 TTAGGATTATGTGGATTGAATTGATGA 57.135 29.630 0.00 0.00 0.00 2.92
1910 4311 8.771521 AGGATTATGTGGATTGAATTGATGAA 57.228 30.769 0.00 0.00 0.00 2.57
1911 4312 9.375974 AGGATTATGTGGATTGAATTGATGAAT 57.624 29.630 0.00 0.00 0.00 2.57
1912 4313 9.991906 GGATTATGTGGATTGAATTGATGAATT 57.008 29.630 0.00 0.00 34.29 2.17
1918 4319 8.586744 TGTGGATTGAATTGATGAATTTGAGAA 58.413 29.630 0.00 0.00 31.58 2.87
1920 4321 8.036575 TGGATTGAATTGATGAATTTGAGAACC 58.963 33.333 0.00 0.00 31.58 3.62
1922 4323 8.997621 ATTGAATTGATGAATTTGAGAACCTG 57.002 30.769 0.00 0.00 31.58 4.00
1927 4328 8.997621 ATTGATGAATTTGAGAACCTGATTTG 57.002 30.769 0.00 0.00 0.00 2.32
1928 4329 7.528996 TGATGAATTTGAGAACCTGATTTGT 57.471 32.000 0.00 0.00 0.00 2.83
1929 4330 8.634335 TGATGAATTTGAGAACCTGATTTGTA 57.366 30.769 0.00 0.00 0.00 2.41
1930 4331 9.246670 TGATGAATTTGAGAACCTGATTTGTAT 57.753 29.630 0.00 0.00 0.00 2.29
1931 4332 9.727627 GATGAATTTGAGAACCTGATTTGTATC 57.272 33.333 0.00 0.00 0.00 2.24
1932 4333 8.634335 TGAATTTGAGAACCTGATTTGTATCA 57.366 30.769 0.00 0.00 38.45 2.15
1935 4336 9.865321 AATTTGAGAACCTGATTTGTATCATTG 57.135 29.630 0.00 0.00 39.94 2.82
1936 4337 8.634335 TTTGAGAACCTGATTTGTATCATTGA 57.366 30.769 0.00 0.00 39.94 2.57
1937 4338 8.634335 TTGAGAACCTGATTTGTATCATTGAA 57.366 30.769 0.00 0.00 39.94 2.69
1938 4339 8.272545 TGAGAACCTGATTTGTATCATTGAAG 57.727 34.615 0.00 0.00 39.94 3.02
1939 4340 8.102676 TGAGAACCTGATTTGTATCATTGAAGA 58.897 33.333 0.00 0.00 39.94 2.87
1940 4341 8.868522 AGAACCTGATTTGTATCATTGAAGAA 57.131 30.769 0.00 0.00 39.94 2.52
1941 4342 8.954350 AGAACCTGATTTGTATCATTGAAGAAG 58.046 33.333 0.00 0.00 39.94 2.85
1942 4343 8.641498 AACCTGATTTGTATCATTGAAGAAGT 57.359 30.769 0.00 0.00 39.94 3.01
1943 4344 9.739276 AACCTGATTTGTATCATTGAAGAAGTA 57.261 29.630 0.00 0.00 39.94 2.24
1944 4345 9.911788 ACCTGATTTGTATCATTGAAGAAGTAT 57.088 29.630 0.00 0.00 39.94 2.12
1947 4348 9.904198 TGATTTGTATCATTGAAGAAGTATGGA 57.096 29.630 0.00 0.00 35.87 3.41
1981 4385 0.451383 TATGCTTGTTGCGGTGATGC 59.549 50.000 0.00 0.00 46.63 3.91
2124 5546 1.131126 CTGCAGTTTTCATACAGGGCG 59.869 52.381 5.25 0.00 0.00 6.13
2179 5613 6.944234 AGTTTTCTTTTCAGGTAGTTCTGG 57.056 37.500 0.00 0.00 35.58 3.86
2203 5637 3.791353 GGCTATAAATTTTGTCACGCTGC 59.209 43.478 0.00 0.00 0.00 5.25
2216 5650 1.857217 CACGCTGCAGCTTATCAGTAG 59.143 52.381 34.22 18.55 39.32 2.57
2299 5749 7.447238 CCTCTTGGAGACCTAATTGTTTTTACA 59.553 37.037 0.00 0.00 34.57 2.41
2322 5772 5.545658 TTTGATCGACAAATCACTTAGCC 57.454 39.130 8.47 0.00 42.57 3.93
2323 5773 3.531538 TGATCGACAAATCACTTAGCCC 58.468 45.455 0.00 0.00 30.76 5.19
2324 5774 2.396590 TCGACAAATCACTTAGCCCC 57.603 50.000 0.00 0.00 0.00 5.80
2325 5775 1.006832 CGACAAATCACTTAGCCCCG 58.993 55.000 0.00 0.00 0.00 5.73
2326 5776 0.733150 GACAAATCACTTAGCCCCGC 59.267 55.000 0.00 0.00 0.00 6.13
2327 5777 0.328258 ACAAATCACTTAGCCCCGCT 59.672 50.000 0.00 0.00 43.41 5.52
2328 5778 1.271926 ACAAATCACTTAGCCCCGCTT 60.272 47.619 0.00 0.00 40.44 4.68
2329 5779 1.133025 CAAATCACTTAGCCCCGCTTG 59.867 52.381 0.00 0.00 40.44 4.01
2330 5780 0.394352 AATCACTTAGCCCCGCTTGG 60.394 55.000 0.00 0.00 40.44 3.61
2331 5781 1.271840 ATCACTTAGCCCCGCTTGGA 61.272 55.000 0.00 0.00 40.44 3.53
2332 5782 1.002624 CACTTAGCCCCGCTTGGAA 60.003 57.895 0.00 0.00 40.44 3.53
2333 5783 0.394352 CACTTAGCCCCGCTTGGAAT 60.394 55.000 0.00 0.00 40.44 3.01
2334 5784 0.394352 ACTTAGCCCCGCTTGGAATG 60.394 55.000 0.00 0.00 40.44 2.67
2335 5785 1.728490 CTTAGCCCCGCTTGGAATGC 61.728 60.000 0.00 0.00 40.44 3.56
2336 5786 3.714487 TAGCCCCGCTTGGAATGCC 62.714 63.158 0.00 0.00 40.44 4.40
2338 5788 3.142838 CCCCGCTTGGAATGCCTG 61.143 66.667 0.00 0.00 35.39 4.85
2339 5789 2.361610 CCCGCTTGGAATGCCTGT 60.362 61.111 0.00 0.00 35.39 4.00
2340 5790 2.703798 CCCGCTTGGAATGCCTGTG 61.704 63.158 0.00 0.00 35.39 3.66
2341 5791 1.675310 CCGCTTGGAATGCCTGTGA 60.675 57.895 0.00 0.00 32.62 3.58
2342 5792 1.243342 CCGCTTGGAATGCCTGTGAA 61.243 55.000 0.00 0.00 32.62 3.18
2343 5793 0.597568 CGCTTGGAATGCCTGTGAAA 59.402 50.000 0.00 0.00 32.62 2.69
2344 5794 1.203052 CGCTTGGAATGCCTGTGAAAT 59.797 47.619 0.00 0.00 32.62 2.17
2345 5795 2.353011 CGCTTGGAATGCCTGTGAAATT 60.353 45.455 0.00 0.00 32.62 1.82
2346 5796 3.667360 GCTTGGAATGCCTGTGAAATTT 58.333 40.909 0.00 0.00 34.31 1.82
2347 5797 4.067192 GCTTGGAATGCCTGTGAAATTTT 58.933 39.130 0.00 0.00 34.31 1.82
2348 5798 5.237048 GCTTGGAATGCCTGTGAAATTTTA 58.763 37.500 0.00 0.00 34.31 1.52
2349 5799 5.120674 GCTTGGAATGCCTGTGAAATTTTAC 59.879 40.000 6.16 6.16 34.31 2.01
2350 5800 5.798125 TGGAATGCCTGTGAAATTTTACA 57.202 34.783 14.35 14.35 34.31 2.41
2351 5801 6.166984 TGGAATGCCTGTGAAATTTTACAA 57.833 33.333 15.67 3.28 34.31 2.41
2352 5802 6.586344 TGGAATGCCTGTGAAATTTTACAAA 58.414 32.000 15.67 6.32 34.31 2.83
2353 5803 7.222872 TGGAATGCCTGTGAAATTTTACAAAT 58.777 30.769 15.67 8.06 34.31 2.32
2354 5804 7.172875 TGGAATGCCTGTGAAATTTTACAAATG 59.827 33.333 15.67 9.12 34.31 2.32
2355 5805 7.173047 GGAATGCCTGTGAAATTTTACAAATGT 59.827 33.333 15.67 2.42 0.00 2.71
2356 5806 9.202273 GAATGCCTGTGAAATTTTACAAATGTA 57.798 29.630 15.67 8.21 0.00 2.29
2357 5807 9.553064 AATGCCTGTGAAATTTTACAAATGTAA 57.447 25.926 15.67 1.96 38.60 2.41
2358 5808 8.948631 TGCCTGTGAAATTTTACAAATGTAAA 57.051 26.923 15.67 13.28 45.55 2.01
2359 5809 8.821894 TGCCTGTGAAATTTTACAAATGTAAAC 58.178 29.630 15.67 7.24 46.48 2.01
2360 5810 9.040939 GCCTGTGAAATTTTACAAATGTAAACT 57.959 29.630 15.67 9.88 46.48 2.66
2387 5837 9.650714 ATTACACCTGTATATTACTGTAGTCCA 57.349 33.333 0.00 0.00 0.00 4.02
2401 5851 6.642683 CTGTAGTCCAGTAAAATACAACCG 57.357 41.667 0.00 0.00 36.37 4.44
2402 5852 5.481105 TGTAGTCCAGTAAAATACAACCGG 58.519 41.667 0.00 0.00 0.00 5.28
2403 5853 3.946606 AGTCCAGTAAAATACAACCGGG 58.053 45.455 6.32 0.00 0.00 5.73
2404 5854 3.328637 AGTCCAGTAAAATACAACCGGGT 59.671 43.478 6.32 0.00 0.00 5.28
2405 5855 4.531732 AGTCCAGTAAAATACAACCGGGTA 59.468 41.667 6.32 0.00 0.00 3.69
2406 5856 5.190330 AGTCCAGTAAAATACAACCGGGTAT 59.810 40.000 6.32 1.36 35.53 2.73
2407 5857 5.882000 GTCCAGTAAAATACAACCGGGTATT 59.118 40.000 6.32 8.38 43.82 1.89
2412 5862 4.968812 AAATACAACCGGGTATTTTCCG 57.031 40.909 17.98 0.00 46.46 4.30
2413 5863 1.736612 TACAACCGGGTATTTTCCGC 58.263 50.000 6.32 0.00 45.60 5.54
2414 5864 0.037160 ACAACCGGGTATTTTCCGCT 59.963 50.000 6.32 0.00 45.60 5.52
2415 5865 0.450184 CAACCGGGTATTTTCCGCTG 59.550 55.000 6.32 0.00 45.60 5.18
2416 5866 0.678684 AACCGGGTATTTTCCGCTGG 60.679 55.000 6.32 0.00 45.60 4.85
2417 5867 1.078001 CCGGGTATTTTCCGCTGGT 60.078 57.895 0.00 0.00 45.60 4.00
2418 5868 0.678684 CCGGGTATTTTCCGCTGGTT 60.679 55.000 0.00 0.00 45.60 3.67
2419 5869 0.450184 CGGGTATTTTCCGCTGGTTG 59.550 55.000 0.00 0.00 41.07 3.77
2420 5870 0.172578 GGGTATTTTCCGCTGGTTGC 59.827 55.000 0.00 0.00 38.57 4.17
2421 5871 0.885196 GGTATTTTCCGCTGGTTGCA 59.115 50.000 0.00 0.00 43.06 4.08
2422 5872 1.271102 GGTATTTTCCGCTGGTTGCAA 59.729 47.619 0.00 0.00 43.06 4.08
2423 5873 2.324860 GTATTTTCCGCTGGTTGCAAC 58.675 47.619 21.59 21.59 43.06 4.17
2424 5874 1.039856 ATTTTCCGCTGGTTGCAACT 58.960 45.000 27.64 2.11 43.06 3.16
2425 5875 0.102120 TTTTCCGCTGGTTGCAACTG 59.898 50.000 27.64 20.74 43.06 3.16
2426 5876 2.348605 TTTCCGCTGGTTGCAACTGC 62.349 55.000 27.64 26.92 43.06 4.40
2427 5877 4.688419 CCGCTGGTTGCAACTGCG 62.688 66.667 37.74 37.74 45.83 5.18
2428 5878 3.952675 CGCTGGTTGCAACTGCGT 61.953 61.111 37.02 0.00 45.83 5.24
2429 5879 2.412937 GCTGGTTGCAACTGCGTT 59.587 55.556 27.64 0.00 45.83 4.84
2430 5880 1.226945 GCTGGTTGCAACTGCGTTT 60.227 52.632 27.64 0.00 45.83 3.60
2431 5881 1.208642 GCTGGTTGCAACTGCGTTTC 61.209 55.000 27.64 10.78 45.83 2.78
2432 5882 0.381801 CTGGTTGCAACTGCGTTTCT 59.618 50.000 27.64 0.00 45.83 2.52
2433 5883 0.100325 TGGTTGCAACTGCGTTTCTG 59.900 50.000 27.64 0.00 45.83 3.02
2434 5884 1.208642 GGTTGCAACTGCGTTTCTGC 61.209 55.000 27.64 4.55 45.83 4.26
2435 5885 0.248621 GTTGCAACTGCGTTTCTGCT 60.249 50.000 22.36 0.00 45.83 4.24
2436 5886 1.002900 GTTGCAACTGCGTTTCTGCTA 60.003 47.619 22.36 0.00 45.83 3.49
2437 5887 1.304254 TGCAACTGCGTTTCTGCTAA 58.696 45.000 0.00 0.00 45.83 3.09
2438 5888 1.002900 TGCAACTGCGTTTCTGCTAAC 60.003 47.619 0.00 0.00 45.83 2.34
2439 5889 1.264288 GCAACTGCGTTTCTGCTAACT 59.736 47.619 0.00 0.00 35.36 2.24
2440 5890 2.663063 GCAACTGCGTTTCTGCTAACTC 60.663 50.000 0.00 0.00 35.36 3.01
2441 5891 1.419374 ACTGCGTTTCTGCTAACTCG 58.581 50.000 0.00 0.00 35.36 4.18
2442 5892 0.716108 CTGCGTTTCTGCTAACTCGG 59.284 55.000 0.00 0.00 35.36 4.63
2443 5893 0.032952 TGCGTTTCTGCTAACTCGGT 59.967 50.000 0.00 0.00 35.36 4.69
2444 5894 1.270274 TGCGTTTCTGCTAACTCGGTA 59.730 47.619 0.00 0.00 35.36 4.02
2445 5895 1.652619 GCGTTTCTGCTAACTCGGTAC 59.347 52.381 0.00 0.00 0.00 3.34
2446 5896 2.670509 GCGTTTCTGCTAACTCGGTACT 60.671 50.000 0.00 0.00 0.00 2.73
2447 5897 3.572584 CGTTTCTGCTAACTCGGTACTT 58.427 45.455 0.00 0.00 0.00 2.24
2448 5898 3.364023 CGTTTCTGCTAACTCGGTACTTG 59.636 47.826 0.00 0.00 0.00 3.16
2449 5899 3.587797 TTCTGCTAACTCGGTACTTGG 57.412 47.619 0.00 0.00 0.00 3.61
2450 5900 2.799017 TCTGCTAACTCGGTACTTGGA 58.201 47.619 0.00 0.00 0.00 3.53
2451 5901 2.490903 TCTGCTAACTCGGTACTTGGAC 59.509 50.000 0.00 0.00 0.00 4.02
2452 5902 1.547372 TGCTAACTCGGTACTTGGACC 59.453 52.381 0.00 0.00 36.00 4.46
2453 5903 1.547372 GCTAACTCGGTACTTGGACCA 59.453 52.381 2.65 0.00 39.72 4.02
2454 5904 2.416972 GCTAACTCGGTACTTGGACCAG 60.417 54.545 2.65 2.07 39.72 4.00
2455 5905 2.005370 AACTCGGTACTTGGACCAGA 57.995 50.000 2.65 0.42 39.72 3.86
2456 5906 2.233305 ACTCGGTACTTGGACCAGAT 57.767 50.000 2.65 0.00 39.72 2.90
2457 5907 2.100989 ACTCGGTACTTGGACCAGATC 58.899 52.381 2.65 0.00 39.72 2.75
2458 5908 2.100197 CTCGGTACTTGGACCAGATCA 58.900 52.381 2.65 0.00 39.72 2.92
2459 5909 1.822990 TCGGTACTTGGACCAGATCAC 59.177 52.381 2.65 0.00 39.72 3.06
2460 5910 1.548719 CGGTACTTGGACCAGATCACA 59.451 52.381 2.65 0.00 39.72 3.58
2461 5911 2.417379 CGGTACTTGGACCAGATCACAG 60.417 54.545 2.65 0.00 39.72 3.66
2462 5912 2.832129 GGTACTTGGACCAGATCACAGA 59.168 50.000 0.00 0.00 39.51 3.41
2463 5913 3.260884 GGTACTTGGACCAGATCACAGAA 59.739 47.826 0.00 0.00 39.51 3.02
2464 5914 3.409026 ACTTGGACCAGATCACAGAAC 57.591 47.619 0.00 0.00 0.00 3.01
2465 5915 2.039084 ACTTGGACCAGATCACAGAACC 59.961 50.000 0.00 0.00 0.00 3.62
2466 5916 1.728323 TGGACCAGATCACAGAACCA 58.272 50.000 0.00 0.00 0.00 3.67
2467 5917 2.054021 TGGACCAGATCACAGAACCAA 58.946 47.619 0.00 0.00 0.00 3.67
2468 5918 2.441375 TGGACCAGATCACAGAACCAAA 59.559 45.455 0.00 0.00 0.00 3.28
2469 5919 3.077359 GGACCAGATCACAGAACCAAAG 58.923 50.000 0.00 0.00 0.00 2.77
2470 5920 2.485814 GACCAGATCACAGAACCAAAGC 59.514 50.000 0.00 0.00 0.00 3.51
2471 5921 2.158623 ACCAGATCACAGAACCAAAGCA 60.159 45.455 0.00 0.00 0.00 3.91
2472 5922 2.227388 CCAGATCACAGAACCAAAGCAC 59.773 50.000 0.00 0.00 0.00 4.40
2473 5923 2.096069 CAGATCACAGAACCAAAGCACG 60.096 50.000 0.00 0.00 0.00 5.34
2474 5924 0.593128 ATCACAGAACCAAAGCACGC 59.407 50.000 0.00 0.00 0.00 5.34
2475 5925 1.369209 CACAGAACCAAAGCACGCG 60.369 57.895 3.53 3.53 0.00 6.01
2476 5926 2.427410 CAGAACCAAAGCACGCGC 60.427 61.111 5.73 0.00 38.99 6.86
2477 5927 4.012895 AGAACCAAAGCACGCGCG 62.013 61.111 30.96 30.96 45.49 6.86
2478 5928 4.307908 GAACCAAAGCACGCGCGT 62.308 61.111 32.73 32.73 45.49 6.01
2479 5929 4.307908 AACCAAAGCACGCGCGTC 62.308 61.111 35.61 26.23 45.49 5.19
2481 5931 4.088762 CCAAAGCACGCGCGTCAT 62.089 61.111 35.61 22.01 45.49 3.06
2482 5932 2.866510 CAAAGCACGCGCGTCATG 60.867 61.111 35.61 23.63 45.49 3.07
2483 5933 3.041351 AAAGCACGCGCGTCATGA 61.041 55.556 35.61 0.00 45.49 3.07
2484 5934 3.015293 AAAGCACGCGCGTCATGAG 62.015 57.895 35.61 22.76 45.49 2.90
2490 5940 4.210304 GCGCGTCATGAGCCGAAC 62.210 66.667 16.56 1.91 37.43 3.95
2491 5941 3.902063 CGCGTCATGAGCCGAACG 61.902 66.667 9.68 4.12 38.13 3.95
2493 5943 3.554692 CGTCATGAGCCGAACGCC 61.555 66.667 0.00 0.00 38.78 5.68
2494 5944 2.434185 GTCATGAGCCGAACGCCA 60.434 61.111 0.00 0.00 38.78 5.69
2495 5945 1.815421 GTCATGAGCCGAACGCCAT 60.815 57.895 0.00 0.00 38.78 4.40
2496 5946 1.815003 TCATGAGCCGAACGCCATG 60.815 57.895 0.00 12.38 42.69 3.66
2497 5947 1.815003 CATGAGCCGAACGCCATGA 60.815 57.895 0.00 0.00 43.38 3.07
2498 5948 1.522355 ATGAGCCGAACGCCATGAG 60.522 57.895 0.00 0.00 38.78 2.90
2499 5949 3.567797 GAGCCGAACGCCATGAGC 61.568 66.667 0.00 0.00 38.78 4.26
2502 5952 2.892425 CCGAACGCCATGAGCCTC 60.892 66.667 0.00 0.00 38.78 4.70
2503 5953 3.257561 CGAACGCCATGAGCCTCG 61.258 66.667 0.00 2.92 38.78 4.63
2504 5954 2.892425 GAACGCCATGAGCCTCGG 60.892 66.667 0.00 0.00 38.78 4.63
2505 5955 3.371097 GAACGCCATGAGCCTCGGA 62.371 63.158 0.00 0.00 38.78 4.55
2506 5956 3.665675 AACGCCATGAGCCTCGGAC 62.666 63.158 0.00 0.00 38.78 4.79
2508 5958 3.838271 GCCATGAGCCTCGGACGA 61.838 66.667 0.00 0.00 34.35 4.20
2509 5959 2.415010 CCATGAGCCTCGGACGAG 59.585 66.667 14.39 14.39 41.63 4.18
2510 5960 2.279120 CATGAGCCTCGGACGAGC 60.279 66.667 15.78 11.22 40.69 5.03
2511 5961 2.755876 ATGAGCCTCGGACGAGCA 60.756 61.111 15.78 9.23 40.69 4.26
2512 5962 2.351244 ATGAGCCTCGGACGAGCAA 61.351 57.895 15.78 5.44 40.69 3.91
2513 5963 2.507324 GAGCCTCGGACGAGCAAC 60.507 66.667 15.78 7.68 40.69 4.17
2514 5964 2.992114 AGCCTCGGACGAGCAACT 60.992 61.111 15.78 9.68 40.69 3.16
2515 5965 2.811317 GCCTCGGACGAGCAACTG 60.811 66.667 15.78 3.68 40.69 3.16
2516 5966 2.811317 CCTCGGACGAGCAACTGC 60.811 66.667 15.78 0.00 40.69 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.676635 CCACATCAGGGTGCACCAG 60.677 63.158 35.78 26.70 43.89 4.00
71 72 1.300620 CGGCCAAAGTGACTCGTCA 60.301 57.895 2.24 0.00 37.24 4.35
77 78 1.303317 ACCCATCGGCCAAAGTGAC 60.303 57.895 2.24 0.00 0.00 3.67
78 79 1.002624 GACCCATCGGCCAAAGTGA 60.003 57.895 2.24 0.00 0.00 3.41
79 80 1.303236 TGACCCATCGGCCAAAGTG 60.303 57.895 2.24 0.00 0.00 3.16
80 81 1.303317 GTGACCCATCGGCCAAAGT 60.303 57.895 2.24 0.00 0.00 2.66
81 82 1.002134 AGTGACCCATCGGCCAAAG 60.002 57.895 2.24 0.00 0.00 2.77
82 83 1.002624 GAGTGACCCATCGGCCAAA 60.003 57.895 2.24 0.00 0.00 3.28
83 84 2.668632 GAGTGACCCATCGGCCAA 59.331 61.111 2.24 0.00 0.00 4.52
84 85 3.770040 CGAGTGACCCATCGGCCA 61.770 66.667 2.24 0.00 35.33 5.36
85 86 2.351336 CTACGAGTGACCCATCGGCC 62.351 65.000 0.00 0.00 43.12 6.13
86 87 1.065928 CTACGAGTGACCCATCGGC 59.934 63.158 0.00 0.00 43.12 5.54
87 88 1.319541 ATCTACGAGTGACCCATCGG 58.680 55.000 0.00 0.00 43.12 4.18
88 89 4.023107 ACATAATCTACGAGTGACCCATCG 60.023 45.833 0.00 0.00 44.36 3.84
89 90 5.455056 ACATAATCTACGAGTGACCCATC 57.545 43.478 0.00 0.00 0.00 3.51
90 91 6.304624 TCTACATAATCTACGAGTGACCCAT 58.695 40.000 0.00 0.00 0.00 4.00
91 92 5.687780 TCTACATAATCTACGAGTGACCCA 58.312 41.667 0.00 0.00 0.00 4.51
92 93 6.430308 TCATCTACATAATCTACGAGTGACCC 59.570 42.308 0.00 0.00 0.00 4.46
93 94 7.436430 TCATCTACATAATCTACGAGTGACC 57.564 40.000 0.00 0.00 0.00 4.02
112 113 2.814919 CCCGAGATTACGTAGCTCATCT 59.185 50.000 20.51 14.79 0.00 2.90
122 123 1.871676 TCGATCAGACCCGAGATTACG 59.128 52.381 0.00 0.00 0.00 3.18
168 169 5.047943 AGGCATCGATACAGGACACTAATAC 60.048 44.000 0.00 0.00 0.00 1.89
190 191 5.168526 TGAAACGTGAATCAAGTTGAAGG 57.831 39.130 14.72 2.02 36.34 3.46
361 362 3.704566 TGGTGTGAGCGAAATACTAGGAT 59.295 43.478 0.00 0.00 0.00 3.24
362 363 3.093814 TGGTGTGAGCGAAATACTAGGA 58.906 45.455 0.00 0.00 0.00 2.94
363 364 3.520290 TGGTGTGAGCGAAATACTAGG 57.480 47.619 0.00 0.00 0.00 3.02
364 365 4.495422 ACTTGGTGTGAGCGAAATACTAG 58.505 43.478 0.00 0.00 0.00 2.57
365 366 4.530710 ACTTGGTGTGAGCGAAATACTA 57.469 40.909 0.00 0.00 0.00 1.82
366 367 3.402628 ACTTGGTGTGAGCGAAATACT 57.597 42.857 0.00 0.00 0.00 2.12
378 379 0.179140 CGTTGCAAAGCACTTGGTGT 60.179 50.000 0.00 0.00 38.71 4.16
379 380 0.871163 CCGTTGCAAAGCACTTGGTG 60.871 55.000 0.00 0.00 38.71 4.17
380 381 1.437160 CCGTTGCAAAGCACTTGGT 59.563 52.632 0.00 0.00 38.71 3.67
381 382 1.950630 GCCGTTGCAAAGCACTTGG 60.951 57.895 15.84 4.81 38.71 3.61
382 383 2.295052 CGCCGTTGCAAAGCACTTG 61.295 57.895 19.45 2.99 38.71 3.16
383 384 2.026014 CGCCGTTGCAAAGCACTT 59.974 55.556 19.45 0.00 38.71 3.16
384 385 3.964875 CCGCCGTTGCAAAGCACT 61.965 61.111 19.45 0.00 38.71 4.40
385 386 2.780149 CTACCGCCGTTGCAAAGCAC 62.780 60.000 19.45 8.17 38.71 4.40
386 387 2.592001 TACCGCCGTTGCAAAGCA 60.592 55.556 19.45 1.30 37.32 3.91
387 388 2.175811 CTACCGCCGTTGCAAAGC 59.824 61.111 0.00 6.68 37.32 3.51
388 389 2.175811 GCTACCGCCGTTGCAAAG 59.824 61.111 0.00 2.09 40.05 2.77
389 390 2.592001 TGCTACCGCCGTTGCAAA 60.592 55.556 11.28 0.00 45.71 3.68
393 394 4.388499 AGGGTGCTACCGCCGTTG 62.388 66.667 0.00 0.00 42.73 4.10
394 395 4.078516 GAGGGTGCTACCGCCGTT 62.079 66.667 0.00 0.00 42.73 4.44
398 399 0.608308 AAAAAGGAGGGTGCTACCGC 60.608 55.000 0.00 0.00 39.83 5.68
399 400 3.644861 AAAAAGGAGGGTGCTACCG 57.355 52.632 0.00 0.00 39.83 4.02
437 438 2.041701 GCACAAATCCATGCCCCTAAT 58.958 47.619 0.00 0.00 35.73 1.73
440 441 4.039042 GCACAAATCCATGCCCCT 57.961 55.556 0.00 0.00 35.73 4.79
460 461 3.617263 GTGAGCGAAATACTAGGGTGTTG 59.383 47.826 0.00 0.00 0.00 3.33
551 552 4.608170 AGGGTTGGTGGATCAATATGTT 57.392 40.909 0.00 0.00 0.00 2.71
582 583 3.620374 CACTTCTCGTTGGATTGATGAGG 59.380 47.826 0.00 0.00 32.30 3.86
612 613 0.036388 GGATTGGCTCAACCTCGACA 60.036 55.000 0.00 0.00 40.22 4.35
665 666 1.754226 GGACCACCACTTTTTCAAGCA 59.246 47.619 0.00 0.00 32.57 3.91
666 667 1.754226 TGGACCACCACTTTTTCAAGC 59.246 47.619 0.00 0.00 41.77 4.01
695 696 8.968242 GTGAATTTTTCTCTTTAAGCAAATCGT 58.032 29.630 0.00 0.00 0.00 3.73
696 697 9.185192 AGTGAATTTTTCTCTTTAAGCAAATCG 57.815 29.630 0.00 0.00 29.85 3.34
709 710 8.794335 AATAGGACCTGTAGTGAATTTTTCTC 57.206 34.615 3.53 0.00 0.00 2.87
713 714 9.449719 CAAGTAATAGGACCTGTAGTGAATTTT 57.550 33.333 3.53 0.00 0.00 1.82
714 715 7.553044 GCAAGTAATAGGACCTGTAGTGAATTT 59.447 37.037 3.53 0.00 0.00 1.82
715 716 7.048512 GCAAGTAATAGGACCTGTAGTGAATT 58.951 38.462 3.53 0.00 0.00 2.17
716 717 6.583562 GCAAGTAATAGGACCTGTAGTGAAT 58.416 40.000 3.53 0.00 0.00 2.57
717 718 5.393787 CGCAAGTAATAGGACCTGTAGTGAA 60.394 44.000 3.53 0.00 0.00 3.18
718 719 4.097437 CGCAAGTAATAGGACCTGTAGTGA 59.903 45.833 3.53 0.00 0.00 3.41
719 720 4.360563 CGCAAGTAATAGGACCTGTAGTG 58.639 47.826 3.53 0.00 0.00 2.74
720 721 3.181478 GCGCAAGTAATAGGACCTGTAGT 60.181 47.826 0.30 0.00 41.68 2.73
721 722 3.068307 AGCGCAAGTAATAGGACCTGTAG 59.932 47.826 11.47 0.00 41.68 2.74
722 723 3.028850 AGCGCAAGTAATAGGACCTGTA 58.971 45.455 11.47 0.00 41.68 2.74
723 724 1.831736 AGCGCAAGTAATAGGACCTGT 59.168 47.619 11.47 0.00 41.68 4.00
724 725 2.205074 CAGCGCAAGTAATAGGACCTG 58.795 52.381 11.47 0.00 41.68 4.00
725 726 1.139058 CCAGCGCAAGTAATAGGACCT 59.861 52.381 11.47 0.00 41.68 3.85
726 727 1.134491 ACCAGCGCAAGTAATAGGACC 60.134 52.381 11.47 0.00 41.68 4.46
727 728 1.933853 CACCAGCGCAAGTAATAGGAC 59.066 52.381 11.47 0.00 41.68 3.85
728 729 1.742411 GCACCAGCGCAAGTAATAGGA 60.742 52.381 11.47 0.00 41.68 2.94
729 730 0.657840 GCACCAGCGCAAGTAATAGG 59.342 55.000 11.47 0.19 41.68 2.57
730 731 0.657840 GGCACCAGCGCAAGTAATAG 59.342 55.000 11.47 0.00 43.41 1.73
731 732 0.035915 TGGCACCAGCGCAAGTAATA 60.036 50.000 11.47 0.00 43.41 0.98
732 733 1.303236 TGGCACCAGCGCAAGTAAT 60.303 52.632 11.47 0.00 43.41 1.89
733 734 1.965930 CTGGCACCAGCGCAAGTAA 60.966 57.895 11.47 0.00 43.41 2.24
734 735 2.358615 CTGGCACCAGCGCAAGTA 60.359 61.111 11.47 0.00 43.41 2.24
742 743 0.678048 GGGACTAAAGCTGGCACCAG 60.678 60.000 12.54 12.54 46.15 4.00
743 744 1.133809 AGGGACTAAAGCTGGCACCA 61.134 55.000 0.00 0.00 36.02 4.17
744 745 0.678048 CAGGGACTAAAGCTGGCACC 60.678 60.000 0.00 0.00 36.02 5.01
745 746 0.036875 ACAGGGACTAAAGCTGGCAC 59.963 55.000 0.00 0.00 36.02 5.01
746 747 0.036732 CACAGGGACTAAAGCTGGCA 59.963 55.000 0.00 0.00 36.02 4.92
747 748 0.678048 CCACAGGGACTAAAGCTGGC 60.678 60.000 0.00 0.00 36.02 4.85
748 749 0.693049 ACCACAGGGACTAAAGCTGG 59.307 55.000 0.00 0.00 36.02 4.85
749 750 2.568623 AACCACAGGGACTAAAGCTG 57.431 50.000 0.00 0.00 36.02 4.24
750 751 2.976882 TGTAACCACAGGGACTAAAGCT 59.023 45.455 0.00 0.00 36.02 3.74
751 752 3.412237 TGTAACCACAGGGACTAAAGC 57.588 47.619 0.00 0.00 36.02 3.51
752 753 6.373495 GGTATTTGTAACCACAGGGACTAAAG 59.627 42.308 0.00 0.00 34.81 1.85
753 754 6.240145 GGTATTTGTAACCACAGGGACTAAA 58.760 40.000 0.00 0.00 34.81 1.85
754 755 5.280624 GGGTATTTGTAACCACAGGGACTAA 60.281 44.000 0.00 0.00 38.87 2.24
755 756 4.225717 GGGTATTTGTAACCACAGGGACTA 59.774 45.833 0.00 0.00 38.87 2.59
756 757 3.009805 GGGTATTTGTAACCACAGGGACT 59.990 47.826 0.00 0.00 38.87 3.85
757 758 3.349927 GGGTATTTGTAACCACAGGGAC 58.650 50.000 0.00 0.00 38.87 4.46
758 759 2.027007 CGGGTATTTGTAACCACAGGGA 60.027 50.000 0.00 0.00 38.87 4.20
759 760 2.027007 TCGGGTATTTGTAACCACAGGG 60.027 50.000 0.00 0.00 38.87 4.45
760 761 3.337694 TCGGGTATTTGTAACCACAGG 57.662 47.619 0.00 0.00 38.87 4.00
761 762 5.890424 ATTTCGGGTATTTGTAACCACAG 57.110 39.130 0.00 0.00 38.87 3.66
762 763 6.236409 TGTATTTCGGGTATTTGTAACCACA 58.764 36.000 0.00 0.00 38.87 4.17
763 764 6.372381 ACTGTATTTCGGGTATTTGTAACCAC 59.628 38.462 0.00 0.00 38.87 4.16
764 765 6.474630 ACTGTATTTCGGGTATTTGTAACCA 58.525 36.000 0.00 0.00 38.87 3.67
765 766 6.594937 TGACTGTATTTCGGGTATTTGTAACC 59.405 38.462 0.00 0.00 36.19 2.85
766 767 7.413328 GGTGACTGTATTTCGGGTATTTGTAAC 60.413 40.741 0.00 0.00 0.00 2.50
767 768 6.594937 GGTGACTGTATTTCGGGTATTTGTAA 59.405 38.462 0.00 0.00 0.00 2.41
768 769 6.108015 GGTGACTGTATTTCGGGTATTTGTA 58.892 40.000 0.00 0.00 0.00 2.41
769 770 4.939439 GGTGACTGTATTTCGGGTATTTGT 59.061 41.667 0.00 0.00 0.00 2.83
770 771 4.938832 TGGTGACTGTATTTCGGGTATTTG 59.061 41.667 0.00 0.00 0.00 2.32
771 772 5.168647 TGGTGACTGTATTTCGGGTATTT 57.831 39.130 0.00 0.00 0.00 1.40
772 773 4.829872 TGGTGACTGTATTTCGGGTATT 57.170 40.909 0.00 0.00 0.00 1.89
773 774 4.510571 GTTGGTGACTGTATTTCGGGTAT 58.489 43.478 0.00 0.00 0.00 2.73
774 775 3.306919 GGTTGGTGACTGTATTTCGGGTA 60.307 47.826 0.00 0.00 0.00 3.69
775 776 2.551504 GGTTGGTGACTGTATTTCGGGT 60.552 50.000 0.00 0.00 0.00 5.28
776 777 2.081462 GGTTGGTGACTGTATTTCGGG 58.919 52.381 0.00 0.00 0.00 5.14
777 778 3.053831 AGGTTGGTGACTGTATTTCGG 57.946 47.619 0.00 0.00 0.00 4.30
778 779 3.364964 GCAAGGTTGGTGACTGTATTTCG 60.365 47.826 0.00 0.00 0.00 3.46
779 780 3.821033 AGCAAGGTTGGTGACTGTATTTC 59.179 43.478 0.00 0.00 37.53 2.17
780 781 3.821033 GAGCAAGGTTGGTGACTGTATTT 59.179 43.478 0.00 0.00 39.30 1.40
781 782 3.073062 AGAGCAAGGTTGGTGACTGTATT 59.927 43.478 0.00 0.00 39.30 1.89
782 783 2.639839 AGAGCAAGGTTGGTGACTGTAT 59.360 45.455 0.00 0.00 39.30 2.29
783 784 2.047061 AGAGCAAGGTTGGTGACTGTA 58.953 47.619 0.00 0.00 39.30 2.74
784 785 0.839946 AGAGCAAGGTTGGTGACTGT 59.160 50.000 0.00 0.00 39.30 3.55
785 786 2.613977 CCTAGAGCAAGGTTGGTGACTG 60.614 54.545 0.00 0.00 39.30 3.51
786 787 1.625818 CCTAGAGCAAGGTTGGTGACT 59.374 52.381 0.00 0.00 39.30 3.41
787 788 1.339151 CCCTAGAGCAAGGTTGGTGAC 60.339 57.143 0.00 0.00 39.30 3.67
788 789 0.984230 CCCTAGAGCAAGGTTGGTGA 59.016 55.000 0.00 0.00 39.30 4.02
789 790 0.035056 CCCCTAGAGCAAGGTTGGTG 60.035 60.000 0.00 0.00 39.30 4.17
790 791 1.853250 GCCCCTAGAGCAAGGTTGGT 61.853 60.000 0.00 0.00 42.35 3.67
791 792 1.077429 GCCCCTAGAGCAAGGTTGG 60.077 63.158 0.00 0.00 34.56 3.77
792 793 1.077429 GGCCCCTAGAGCAAGGTTG 60.077 63.158 0.00 0.00 34.56 3.77
793 794 0.921256 ATGGCCCCTAGAGCAAGGTT 60.921 55.000 0.00 0.00 34.56 3.50
794 795 1.308216 ATGGCCCCTAGAGCAAGGT 60.308 57.895 0.00 0.00 34.56 3.50
795 796 1.059006 AGATGGCCCCTAGAGCAAGG 61.059 60.000 0.00 0.00 36.30 3.61
796 797 1.346068 GTAGATGGCCCCTAGAGCAAG 59.654 57.143 0.00 0.00 0.00 4.01
797 798 1.424638 GTAGATGGCCCCTAGAGCAA 58.575 55.000 0.00 0.00 0.00 3.91
798 799 0.827925 CGTAGATGGCCCCTAGAGCA 60.828 60.000 0.00 0.00 0.00 4.26
799 800 1.536943 CCGTAGATGGCCCCTAGAGC 61.537 65.000 0.00 0.00 0.00 4.09
800 801 0.178958 ACCGTAGATGGCCCCTAGAG 60.179 60.000 0.00 0.00 0.00 2.43
801 802 0.178970 GACCGTAGATGGCCCCTAGA 60.179 60.000 0.00 0.00 0.00 2.43
802 803 1.186267 GGACCGTAGATGGCCCCTAG 61.186 65.000 0.00 0.00 0.00 3.02
803 804 1.152398 GGACCGTAGATGGCCCCTA 60.152 63.158 0.00 0.00 0.00 3.53
804 805 2.446036 GGACCGTAGATGGCCCCT 60.446 66.667 0.00 0.00 0.00 4.79
805 806 1.705997 AATGGACCGTAGATGGCCCC 61.706 60.000 0.00 0.00 0.00 5.80
806 807 1.053424 TAATGGACCGTAGATGGCCC 58.947 55.000 0.00 0.00 0.00 5.80
807 808 3.675228 CGTATAATGGACCGTAGATGGCC 60.675 52.174 0.00 0.00 0.00 5.36
808 809 3.508762 CGTATAATGGACCGTAGATGGC 58.491 50.000 0.00 0.00 0.00 4.40
809 810 3.508793 ACCGTATAATGGACCGTAGATGG 59.491 47.826 6.41 6.41 0.00 3.51
810 811 4.778534 ACCGTATAATGGACCGTAGATG 57.221 45.455 0.00 0.00 0.00 2.90
811 812 5.796424 AAACCGTATAATGGACCGTAGAT 57.204 39.130 0.00 0.00 0.00 1.98
812 813 5.105392 ACAAAACCGTATAATGGACCGTAGA 60.105 40.000 0.00 0.00 0.00 2.59
813 814 5.005971 CACAAAACCGTATAATGGACCGTAG 59.994 44.000 0.00 0.00 0.00 3.51
814 815 4.869297 CACAAAACCGTATAATGGACCGTA 59.131 41.667 0.00 0.00 0.00 4.02
815 816 3.685756 CACAAAACCGTATAATGGACCGT 59.314 43.478 0.00 0.00 0.00 4.83
816 817 3.685756 ACACAAAACCGTATAATGGACCG 59.314 43.478 0.00 0.00 0.00 4.79
817 818 5.220453 CGTACACAAAACCGTATAATGGACC 60.220 44.000 0.00 0.00 0.00 4.46
818 819 5.348451 ACGTACACAAAACCGTATAATGGAC 59.652 40.000 0.00 0.00 0.00 4.02
819 820 5.477510 ACGTACACAAAACCGTATAATGGA 58.522 37.500 0.00 0.00 0.00 3.41
820 821 5.783100 ACGTACACAAAACCGTATAATGG 57.217 39.130 0.00 0.00 0.00 3.16
821 822 9.998381 CATATACGTACACAAAACCGTATAATG 57.002 33.333 12.83 9.09 45.94 1.90
822 823 9.195411 CCATATACGTACACAAAACCGTATAAT 57.805 33.333 12.83 2.70 45.94 1.28
823 824 8.194104 ACCATATACGTACACAAAACCGTATAA 58.806 33.333 12.83 0.90 45.94 0.98
824 825 7.647318 CACCATATACGTACACAAAACCGTATA 59.353 37.037 11.64 11.64 46.49 1.47
825 826 6.476380 CACCATATACGTACACAAAACCGTAT 59.524 38.462 0.00 8.37 45.39 3.06
826 827 5.804473 CACCATATACGTACACAAAACCGTA 59.196 40.000 0.00 0.00 39.74 4.02
827 828 4.626604 CACCATATACGTACACAAAACCGT 59.373 41.667 0.00 0.00 37.33 4.83
828 829 4.863689 TCACCATATACGTACACAAAACCG 59.136 41.667 0.00 0.00 0.00 4.44
829 830 5.220529 GCTCACCATATACGTACACAAAACC 60.221 44.000 0.00 0.00 0.00 3.27
830 831 5.579511 AGCTCACCATATACGTACACAAAAC 59.420 40.000 0.00 0.00 0.00 2.43
831 832 5.579119 CAGCTCACCATATACGTACACAAAA 59.421 40.000 0.00 0.00 0.00 2.44
832 833 5.106442 CAGCTCACCATATACGTACACAAA 58.894 41.667 0.00 0.00 0.00 2.83
833 834 4.440940 CCAGCTCACCATATACGTACACAA 60.441 45.833 0.00 0.00 0.00 3.33
834 835 3.067601 CCAGCTCACCATATACGTACACA 59.932 47.826 0.00 0.00 0.00 3.72
835 836 3.639538 CCAGCTCACCATATACGTACAC 58.360 50.000 0.00 0.00 0.00 2.90
836 837 2.035449 GCCAGCTCACCATATACGTACA 59.965 50.000 0.00 0.00 0.00 2.90
837 838 2.296471 AGCCAGCTCACCATATACGTAC 59.704 50.000 0.00 0.00 0.00 3.67
838 839 2.557056 GAGCCAGCTCACCATATACGTA 59.443 50.000 14.70 0.00 42.31 3.57
839 840 1.341531 GAGCCAGCTCACCATATACGT 59.658 52.381 14.70 0.00 42.31 3.57
840 841 1.615883 AGAGCCAGCTCACCATATACG 59.384 52.381 21.06 0.00 44.99 3.06
841 842 3.829601 ACTAGAGCCAGCTCACCATATAC 59.170 47.826 21.06 0.00 44.99 1.47
842 843 4.082845 GACTAGAGCCAGCTCACCATATA 58.917 47.826 21.06 3.52 44.99 0.86
843 844 2.896685 GACTAGAGCCAGCTCACCATAT 59.103 50.000 21.06 2.49 44.99 1.78
844 845 2.311463 GACTAGAGCCAGCTCACCATA 58.689 52.381 21.06 4.54 44.99 2.74
845 846 1.118838 GACTAGAGCCAGCTCACCAT 58.881 55.000 21.06 3.56 44.99 3.55
846 847 0.251787 TGACTAGAGCCAGCTCACCA 60.252 55.000 21.06 10.03 44.99 4.17
847 848 0.898320 TTGACTAGAGCCAGCTCACC 59.102 55.000 21.06 7.78 44.99 4.02
848 849 1.404851 GGTTGACTAGAGCCAGCTCAC 60.405 57.143 21.06 9.31 44.99 3.51
849 850 0.898320 GGTTGACTAGAGCCAGCTCA 59.102 55.000 21.06 6.96 44.99 4.26
850 851 0.179124 CGGTTGACTAGAGCCAGCTC 60.179 60.000 11.78 11.78 43.03 4.09
851 852 0.612174 TCGGTTGACTAGAGCCAGCT 60.612 55.000 0.00 0.00 0.00 4.24
852 853 0.461961 ATCGGTTGACTAGAGCCAGC 59.538 55.000 0.00 0.00 0.00 4.85
853 854 1.804372 GCATCGGTTGACTAGAGCCAG 60.804 57.143 0.00 0.00 0.00 4.85
854 855 0.175760 GCATCGGTTGACTAGAGCCA 59.824 55.000 0.00 0.00 0.00 4.75
855 856 0.530870 GGCATCGGTTGACTAGAGCC 60.531 60.000 0.00 0.00 0.00 4.70
856 857 0.175760 TGGCATCGGTTGACTAGAGC 59.824 55.000 0.00 0.00 32.91 4.09
857 858 2.093973 ACTTGGCATCGGTTGACTAGAG 60.094 50.000 9.80 1.09 38.36 2.43
858 859 1.899814 ACTTGGCATCGGTTGACTAGA 59.100 47.619 9.80 0.00 38.36 2.43
859 860 2.002586 CACTTGGCATCGGTTGACTAG 58.997 52.381 2.42 2.42 41.46 2.57
860 861 1.346395 ACACTTGGCATCGGTTGACTA 59.654 47.619 0.00 0.00 32.91 2.59
861 862 0.108585 ACACTTGGCATCGGTTGACT 59.891 50.000 0.00 0.00 32.91 3.41
862 863 0.238289 CACACTTGGCATCGGTTGAC 59.762 55.000 0.00 0.00 0.00 3.18
863 864 1.514678 GCACACTTGGCATCGGTTGA 61.515 55.000 0.00 0.00 0.00 3.18
864 865 1.081242 GCACACTTGGCATCGGTTG 60.081 57.895 0.00 0.00 0.00 3.77
865 866 1.528076 TGCACACTTGGCATCGGTT 60.528 52.632 0.00 0.00 36.11 4.44
866 867 2.112928 TGCACACTTGGCATCGGT 59.887 55.556 0.00 0.00 36.11 4.69
871 872 0.669619 CAGTCAATGCACACTTGGCA 59.330 50.000 5.96 0.00 46.66 4.92
872 873 3.484524 CAGTCAATGCACACTTGGC 57.515 52.632 0.00 0.00 0.00 4.52
882 883 3.411808 GCACATGTGGCAGTCAATG 57.588 52.632 26.55 0.00 0.00 2.82
891 892 2.034532 TGAGCTGGGCACATGTGG 59.965 61.111 26.55 11.38 0.00 4.17
892 893 1.303074 AGTGAGCTGGGCACATGTG 60.303 57.895 21.83 21.83 38.70 3.21
893 894 1.002868 GAGTGAGCTGGGCACATGT 60.003 57.895 6.78 0.00 38.70 3.21
894 895 2.104859 CGAGTGAGCTGGGCACATG 61.105 63.158 6.78 0.00 38.70 3.21
895 896 1.830587 TTCGAGTGAGCTGGGCACAT 61.831 55.000 6.78 0.00 38.70 3.21
896 897 1.830587 ATTCGAGTGAGCTGGGCACA 61.831 55.000 6.78 0.00 38.70 4.57
897 898 0.175760 TATTCGAGTGAGCTGGGCAC 59.824 55.000 0.00 0.00 36.53 5.01
898 899 0.175760 GTATTCGAGTGAGCTGGGCA 59.824 55.000 0.00 0.00 0.00 5.36
899 900 0.872021 CGTATTCGAGTGAGCTGGGC 60.872 60.000 0.00 0.00 39.71 5.36
900 901 0.872021 GCGTATTCGAGTGAGCTGGG 60.872 60.000 0.00 0.00 39.71 4.45
901 902 0.179137 TGCGTATTCGAGTGAGCTGG 60.179 55.000 0.00 0.00 39.71 4.85
902 903 1.520174 CATGCGTATTCGAGTGAGCTG 59.480 52.381 0.00 3.97 39.71 4.24
903 904 1.845266 CATGCGTATTCGAGTGAGCT 58.155 50.000 9.89 0.00 39.71 4.09
904 905 0.230769 GCATGCGTATTCGAGTGAGC 59.769 55.000 0.00 0.00 39.71 4.26
905 906 1.256376 GTGCATGCGTATTCGAGTGAG 59.744 52.381 14.09 0.00 39.71 3.51
906 907 1.277326 GTGCATGCGTATTCGAGTGA 58.723 50.000 14.09 0.00 39.71 3.41
907 908 0.043907 CGTGCATGCGTATTCGAGTG 60.044 55.000 14.09 0.00 39.71 3.51
908 909 1.752501 GCGTGCATGCGTATTCGAGT 61.753 55.000 16.43 0.00 39.71 4.18
909 910 1.084037 GCGTGCATGCGTATTCGAG 60.084 57.895 16.43 0.00 39.71 4.04
910 911 1.751536 CTGCGTGCATGCGTATTCGA 61.752 55.000 25.05 5.56 39.71 3.71
911 912 1.366844 CTGCGTGCATGCGTATTCG 60.367 57.895 25.05 12.91 37.81 3.34
912 913 0.096976 AACTGCGTGCATGCGTATTC 59.903 50.000 25.05 0.00 37.81 1.75
913 914 0.521291 AAACTGCGTGCATGCGTATT 59.479 45.000 25.05 15.91 37.81 1.89
914 915 0.521291 AAAACTGCGTGCATGCGTAT 59.479 45.000 25.05 14.73 37.81 3.06
915 916 0.309302 AAAAACTGCGTGCATGCGTA 59.691 45.000 25.05 8.57 37.81 4.42
916 917 1.065600 AAAAACTGCGTGCATGCGT 59.934 47.368 25.05 21.35 37.81 5.24
917 918 3.920738 AAAAACTGCGTGCATGCG 58.079 50.000 25.05 20.74 37.81 4.73
944 945 9.657419 AGGATCTTTTAATTACTGGCAATTTTG 57.343 29.630 0.00 0.00 30.84 2.44
945 946 9.875691 GAGGATCTTTTAATTACTGGCAATTTT 57.124 29.630 0.00 0.00 30.84 1.82
946 947 9.034800 TGAGGATCTTTTAATTACTGGCAATTT 57.965 29.630 0.00 0.00 34.92 1.82
947 948 8.593945 TGAGGATCTTTTAATTACTGGCAATT 57.406 30.769 0.00 0.00 34.92 2.32
948 949 8.593945 TTGAGGATCTTTTAATTACTGGCAAT 57.406 30.769 0.00 0.00 34.92 3.56
949 950 8.303876 GTTTGAGGATCTTTTAATTACTGGCAA 58.696 33.333 0.00 0.00 34.92 4.52
950 951 7.093945 GGTTTGAGGATCTTTTAATTACTGGCA 60.094 37.037 0.00 0.00 34.92 4.92
951 952 7.258441 GGTTTGAGGATCTTTTAATTACTGGC 58.742 38.462 0.00 0.00 34.92 4.85
952 953 7.147897 GGGGTTTGAGGATCTTTTAATTACTGG 60.148 40.741 0.00 0.00 34.92 4.00
953 954 7.415206 CGGGGTTTGAGGATCTTTTAATTACTG 60.415 40.741 0.00 0.00 34.92 2.74
954 955 6.602009 CGGGGTTTGAGGATCTTTTAATTACT 59.398 38.462 0.00 0.00 34.92 2.24
955 956 6.679638 GCGGGGTTTGAGGATCTTTTAATTAC 60.680 42.308 0.00 0.00 34.92 1.89
956 957 5.358725 GCGGGGTTTGAGGATCTTTTAATTA 59.641 40.000 0.00 0.00 34.92 1.40
957 958 4.159693 GCGGGGTTTGAGGATCTTTTAATT 59.840 41.667 0.00 0.00 34.92 1.40
958 959 3.699538 GCGGGGTTTGAGGATCTTTTAAT 59.300 43.478 0.00 0.00 34.92 1.40
959 960 3.086282 GCGGGGTTTGAGGATCTTTTAA 58.914 45.455 0.00 0.00 34.92 1.52
960 961 2.619590 GGCGGGGTTTGAGGATCTTTTA 60.620 50.000 0.00 0.00 34.92 1.52
961 962 1.545841 GCGGGGTTTGAGGATCTTTT 58.454 50.000 0.00 0.00 34.92 2.27
962 963 0.323451 GGCGGGGTTTGAGGATCTTT 60.323 55.000 0.00 0.00 34.92 2.52
963 964 1.303282 GGCGGGGTTTGAGGATCTT 59.697 57.895 0.00 0.00 34.92 2.40
964 965 2.998949 GGCGGGGTTTGAGGATCT 59.001 61.111 0.00 0.00 34.92 2.75
965 966 2.513897 CGGCGGGGTTTGAGGATC 60.514 66.667 0.00 0.00 0.00 3.36
966 967 4.796495 GCGGCGGGGTTTGAGGAT 62.796 66.667 9.78 0.00 0.00 3.24
1011 1012 0.036448 TCGTGGTCTCCTTCTCGTCT 59.964 55.000 0.00 0.00 0.00 4.18
1041 1042 1.532868 CCGGTGAACTTGAAGAGCTTG 59.467 52.381 0.00 0.00 0.00 4.01
1321 1332 2.214181 GAAGAGGAACGAGCGCTCCA 62.214 60.000 30.66 0.00 33.08 3.86
1475 3011 3.284449 GCGTTGGTGTCGGCCTTT 61.284 61.111 0.00 0.00 0.00 3.11
1525 3061 0.745468 CTCCTACTTGCGGAGGTACC 59.255 60.000 2.73 2.73 43.47 3.34
1539 3075 1.289231 ACCTCACATGAGCTCCTCCTA 59.711 52.381 12.15 0.00 40.75 2.94
1627 3163 8.789825 ACTCTCGAACAAGATAGTAGTAAGAA 57.210 34.615 0.00 0.00 0.00 2.52
1711 3247 7.227049 AGACCAATTATCACCGAAAATTTGT 57.773 32.000 0.00 0.00 0.00 2.83
1778 3930 7.554118 CCTCATTCCACACAATTCAGTAAGTAT 59.446 37.037 0.00 0.00 0.00 2.12
1893 4294 8.866956 GTTCTCAAATTCATCAATTCAATCCAC 58.133 33.333 0.00 0.00 30.37 4.02
1894 4295 8.036575 GGTTCTCAAATTCATCAATTCAATCCA 58.963 33.333 0.00 0.00 30.37 3.41
1895 4296 8.255905 AGGTTCTCAAATTCATCAATTCAATCC 58.744 33.333 0.00 0.00 30.37 3.01
1896 4297 9.084164 CAGGTTCTCAAATTCATCAATTCAATC 57.916 33.333 0.00 0.00 30.37 2.67
1897 4298 8.809066 TCAGGTTCTCAAATTCATCAATTCAAT 58.191 29.630 0.00 0.00 30.37 2.57
1898 4299 8.180706 TCAGGTTCTCAAATTCATCAATTCAA 57.819 30.769 0.00 0.00 30.37 2.69
1899 4300 7.764141 TCAGGTTCTCAAATTCATCAATTCA 57.236 32.000 0.00 0.00 30.37 2.57
1900 4301 9.649167 AAATCAGGTTCTCAAATTCATCAATTC 57.351 29.630 0.00 0.00 30.37 2.17
1902 4303 8.591072 ACAAATCAGGTTCTCAAATTCATCAAT 58.409 29.630 0.00 0.00 0.00 2.57
1903 4304 7.954835 ACAAATCAGGTTCTCAAATTCATCAA 58.045 30.769 0.00 0.00 0.00 2.57
1904 4305 7.528996 ACAAATCAGGTTCTCAAATTCATCA 57.471 32.000 0.00 0.00 0.00 3.07
1905 4306 9.727627 GATACAAATCAGGTTCTCAAATTCATC 57.272 33.333 0.00 0.00 31.93 2.92
1906 4307 9.246670 TGATACAAATCAGGTTCTCAAATTCAT 57.753 29.630 0.00 0.00 37.20 2.57
1907 4308 8.634335 TGATACAAATCAGGTTCTCAAATTCA 57.366 30.769 0.00 0.00 37.20 2.57
1909 4310 9.865321 CAATGATACAAATCAGGTTCTCAAATT 57.135 29.630 0.00 0.00 45.17 1.82
1910 4311 9.246670 TCAATGATACAAATCAGGTTCTCAAAT 57.753 29.630 0.00 0.00 45.17 2.32
1911 4312 8.634335 TCAATGATACAAATCAGGTTCTCAAA 57.366 30.769 0.00 0.00 45.17 2.69
1912 4313 8.634335 TTCAATGATACAAATCAGGTTCTCAA 57.366 30.769 0.00 0.00 45.17 3.02
1915 4316 8.868522 TTCTTCAATGATACAAATCAGGTTCT 57.131 30.769 0.00 0.00 45.17 3.01
1918 4319 9.911788 ATACTTCTTCAATGATACAAATCAGGT 57.088 29.630 0.00 0.00 45.17 4.00
1932 4333 9.293404 CCACATATCAATCCATACTTCTTCAAT 57.707 33.333 0.00 0.00 0.00 2.57
1934 4335 7.805163 ACCACATATCAATCCATACTTCTTCA 58.195 34.615 0.00 0.00 0.00 3.02
1935 4336 8.153550 AGACCACATATCAATCCATACTTCTTC 58.846 37.037 0.00 0.00 0.00 2.87
1936 4337 8.038862 AGACCACATATCAATCCATACTTCTT 57.961 34.615 0.00 0.00 0.00 2.52
1937 4338 7.623999 AGACCACATATCAATCCATACTTCT 57.376 36.000 0.00 0.00 0.00 2.85
1938 4339 9.950496 ATAAGACCACATATCAATCCATACTTC 57.050 33.333 0.00 0.00 0.00 3.01
1939 4340 9.730705 CATAAGACCACATATCAATCCATACTT 57.269 33.333 0.00 0.00 0.00 2.24
1940 4341 7.826252 GCATAAGACCACATATCAATCCATACT 59.174 37.037 0.00 0.00 0.00 2.12
1941 4342 7.826252 AGCATAAGACCACATATCAATCCATAC 59.174 37.037 0.00 0.00 0.00 2.39
1942 4343 7.921304 AGCATAAGACCACATATCAATCCATA 58.079 34.615 0.00 0.00 0.00 2.74
1943 4344 6.787170 AGCATAAGACCACATATCAATCCAT 58.213 36.000 0.00 0.00 0.00 3.41
1944 4345 6.191657 AGCATAAGACCACATATCAATCCA 57.808 37.500 0.00 0.00 0.00 3.41
1945 4346 6.488006 ACAAGCATAAGACCACATATCAATCC 59.512 38.462 0.00 0.00 0.00 3.01
1946 4347 7.502120 ACAAGCATAAGACCACATATCAATC 57.498 36.000 0.00 0.00 0.00 2.67
1947 4348 7.682741 GCAACAAGCATAAGACCACATATCAAT 60.683 37.037 0.00 0.00 44.79 2.57
2124 5546 0.391661 TCAGACATCCGCTTTGCCTC 60.392 55.000 0.00 0.00 0.00 4.70
2179 5613 4.793216 CAGCGTGACAAAATTTATAGCCAC 59.207 41.667 0.00 0.00 0.00 5.01
2216 5650 2.285220 CACACGATACAATGCAGTAGCC 59.715 50.000 0.00 0.00 41.13 3.93
2321 5771 3.142838 CAGGCATTCCAAGCGGGG 61.143 66.667 0.00 0.00 37.22 5.73
2322 5772 2.361610 ACAGGCATTCCAAGCGGG 60.362 61.111 0.00 0.00 38.37 6.13
2323 5773 1.243342 TTCACAGGCATTCCAAGCGG 61.243 55.000 0.00 0.00 33.74 5.52
2324 5774 0.597568 TTTCACAGGCATTCCAAGCG 59.402 50.000 0.00 0.00 33.74 4.68
2325 5775 3.323751 AATTTCACAGGCATTCCAAGC 57.676 42.857 0.00 0.00 33.74 4.01
2326 5776 6.222389 TGTAAAATTTCACAGGCATTCCAAG 58.778 36.000 0.00 0.00 33.74 3.61
2327 5777 6.166984 TGTAAAATTTCACAGGCATTCCAA 57.833 33.333 0.00 0.00 33.74 3.53
2328 5778 5.798125 TGTAAAATTTCACAGGCATTCCA 57.202 34.783 0.00 0.00 33.74 3.53
2329 5779 7.173047 ACATTTGTAAAATTTCACAGGCATTCC 59.827 33.333 0.00 0.00 0.00 3.01
2330 5780 8.086851 ACATTTGTAAAATTTCACAGGCATTC 57.913 30.769 0.00 0.00 0.00 2.67
2331 5781 9.553064 TTACATTTGTAAAATTTCACAGGCATT 57.447 25.926 0.74 0.00 37.54 3.56
2332 5782 9.553064 TTTACATTTGTAAAATTTCACAGGCAT 57.447 25.926 12.28 0.00 44.63 4.40
2333 5783 8.948631 TTTACATTTGTAAAATTTCACAGGCA 57.051 26.923 12.28 0.00 44.63 4.75
2361 5811 9.650714 TGGACTACAGTAATATACAGGTGTAAT 57.349 33.333 0.00 0.00 33.76 1.89
2362 5812 9.128404 CTGGACTACAGTAATATACAGGTGTAA 57.872 37.037 0.00 0.00 42.42 2.41
2363 5813 8.687292 CTGGACTACAGTAATATACAGGTGTA 57.313 38.462 0.00 0.00 42.42 2.90
2364 5814 7.584122 CTGGACTACAGTAATATACAGGTGT 57.416 40.000 0.00 0.00 42.42 4.16
2379 5829 5.481105 CCGGTTGTATTTTACTGGACTACA 58.519 41.667 0.00 0.00 42.32 2.74
2380 5830 4.872124 CCCGGTTGTATTTTACTGGACTAC 59.128 45.833 0.00 0.00 42.32 2.73
2381 5831 4.531732 ACCCGGTTGTATTTTACTGGACTA 59.468 41.667 0.00 0.00 42.32 2.59
2382 5832 3.328637 ACCCGGTTGTATTTTACTGGACT 59.671 43.478 0.00 0.00 42.32 3.85
2383 5833 3.678289 ACCCGGTTGTATTTTACTGGAC 58.322 45.455 0.00 0.00 42.32 4.02
2384 5834 5.697082 ATACCCGGTTGTATTTTACTGGA 57.303 39.130 0.00 0.00 42.32 3.86
2385 5835 6.762702 AAATACCCGGTTGTATTTTACTGG 57.237 37.500 17.98 0.00 44.82 4.00
2392 5842 2.684374 GCGGAAAATACCCGGTTGTATT 59.316 45.455 9.55 9.55 46.55 1.89
2393 5843 2.291365 GCGGAAAATACCCGGTTGTAT 58.709 47.619 0.00 0.00 46.55 2.29
2394 5844 1.736612 GCGGAAAATACCCGGTTGTA 58.263 50.000 0.00 0.00 46.55 2.41
2395 5845 2.558617 GCGGAAAATACCCGGTTGT 58.441 52.632 0.00 0.00 46.55 3.32
2399 5849 0.678684 AACCAGCGGAAAATACCCGG 60.679 55.000 0.00 0.00 46.55 5.73
2401 5851 0.172578 GCAACCAGCGGAAAATACCC 59.827 55.000 1.50 0.00 0.00 3.69
2402 5852 3.713936 GCAACCAGCGGAAAATACC 57.286 52.632 1.50 0.00 0.00 2.73
2423 5873 0.716108 CCGAGTTAGCAGAAACGCAG 59.284 55.000 0.00 0.00 34.46 5.18
2424 5874 0.032952 ACCGAGTTAGCAGAAACGCA 59.967 50.000 0.00 0.00 34.46 5.24
2425 5875 1.652619 GTACCGAGTTAGCAGAAACGC 59.347 52.381 0.00 0.00 34.46 4.84
2426 5876 3.213249 AGTACCGAGTTAGCAGAAACG 57.787 47.619 0.00 0.00 34.46 3.60
2427 5877 3.678548 CCAAGTACCGAGTTAGCAGAAAC 59.321 47.826 0.00 0.00 0.00 2.78
2428 5878 3.575256 TCCAAGTACCGAGTTAGCAGAAA 59.425 43.478 0.00 0.00 0.00 2.52
2429 5879 3.057033 GTCCAAGTACCGAGTTAGCAGAA 60.057 47.826 0.00 0.00 0.00 3.02
2430 5880 2.490903 GTCCAAGTACCGAGTTAGCAGA 59.509 50.000 0.00 0.00 0.00 4.26
2431 5881 2.416972 GGTCCAAGTACCGAGTTAGCAG 60.417 54.545 0.00 0.00 0.00 4.24
2432 5882 1.547372 GGTCCAAGTACCGAGTTAGCA 59.453 52.381 0.00 0.00 0.00 3.49
2433 5883 1.547372 TGGTCCAAGTACCGAGTTAGC 59.453 52.381 0.00 0.00 42.91 3.09
2434 5884 3.087031 TCTGGTCCAAGTACCGAGTTAG 58.913 50.000 0.00 0.00 42.91 2.34
2435 5885 3.159213 TCTGGTCCAAGTACCGAGTTA 57.841 47.619 0.00 0.00 42.91 2.24
2436 5886 2.005370 TCTGGTCCAAGTACCGAGTT 57.995 50.000 0.00 0.00 42.91 3.01
2437 5887 2.100989 GATCTGGTCCAAGTACCGAGT 58.899 52.381 0.00 0.00 42.91 4.18
2438 5888 2.100197 TGATCTGGTCCAAGTACCGAG 58.900 52.381 0.00 0.00 42.91 4.63
2439 5889 1.822990 GTGATCTGGTCCAAGTACCGA 59.177 52.381 0.00 0.00 42.91 4.69
2440 5890 1.548719 TGTGATCTGGTCCAAGTACCG 59.451 52.381 0.00 0.00 42.91 4.02
2441 5891 2.832129 TCTGTGATCTGGTCCAAGTACC 59.168 50.000 0.00 0.00 40.19 3.34
2442 5892 4.246458 GTTCTGTGATCTGGTCCAAGTAC 58.754 47.826 0.00 0.00 0.00 2.73
2443 5893 3.260884 GGTTCTGTGATCTGGTCCAAGTA 59.739 47.826 0.00 0.00 0.00 2.24
2444 5894 2.039084 GGTTCTGTGATCTGGTCCAAGT 59.961 50.000 0.00 0.00 0.00 3.16
2445 5895 2.038952 TGGTTCTGTGATCTGGTCCAAG 59.961 50.000 0.00 0.00 0.00 3.61
2446 5896 2.054021 TGGTTCTGTGATCTGGTCCAA 58.946 47.619 0.00 0.00 0.00 3.53
2447 5897 1.728323 TGGTTCTGTGATCTGGTCCA 58.272 50.000 0.00 0.00 0.00 4.02
2448 5898 2.859165 TTGGTTCTGTGATCTGGTCC 57.141 50.000 0.00 0.00 0.00 4.46
2449 5899 2.485814 GCTTTGGTTCTGTGATCTGGTC 59.514 50.000 0.00 0.00 0.00 4.02
2450 5900 2.158623 TGCTTTGGTTCTGTGATCTGGT 60.159 45.455 0.00 0.00 0.00 4.00
2451 5901 2.227388 GTGCTTTGGTTCTGTGATCTGG 59.773 50.000 0.00 0.00 0.00 3.86
2452 5902 2.096069 CGTGCTTTGGTTCTGTGATCTG 60.096 50.000 0.00 0.00 0.00 2.90
2453 5903 2.146342 CGTGCTTTGGTTCTGTGATCT 58.854 47.619 0.00 0.00 0.00 2.75
2454 5904 1.400242 GCGTGCTTTGGTTCTGTGATC 60.400 52.381 0.00 0.00 0.00 2.92
2455 5905 0.593128 GCGTGCTTTGGTTCTGTGAT 59.407 50.000 0.00 0.00 0.00 3.06
2456 5906 1.771073 CGCGTGCTTTGGTTCTGTGA 61.771 55.000 0.00 0.00 0.00 3.58
2457 5907 1.369209 CGCGTGCTTTGGTTCTGTG 60.369 57.895 0.00 0.00 0.00 3.66
2458 5908 3.022287 CGCGTGCTTTGGTTCTGT 58.978 55.556 0.00 0.00 0.00 3.41
2459 5909 2.427410 GCGCGTGCTTTGGTTCTG 60.427 61.111 15.02 0.00 38.39 3.02
2460 5910 4.012895 CGCGCGTGCTTTGGTTCT 62.013 61.111 24.19 0.00 39.65 3.01
2461 5911 4.307908 ACGCGCGTGCTTTGGTTC 62.308 61.111 37.37 0.00 39.65 3.62
2462 5912 4.307908 GACGCGCGTGCTTTGGTT 62.308 61.111 42.90 12.81 39.65 3.67
2464 5914 4.088762 ATGACGCGCGTGCTTTGG 62.089 61.111 42.90 6.65 39.65 3.28
2465 5915 2.866510 CATGACGCGCGTGCTTTG 60.867 61.111 42.90 25.70 39.65 2.77
2466 5916 3.015293 CTCATGACGCGCGTGCTTT 62.015 57.895 42.90 16.55 39.65 3.51
2467 5917 3.481903 CTCATGACGCGCGTGCTT 61.482 61.111 42.90 24.52 39.65 3.91
2473 5923 4.210304 GTTCGGCTCATGACGCGC 62.210 66.667 5.73 0.00 45.91 6.86
2474 5924 3.902063 CGTTCGGCTCATGACGCG 61.902 66.667 3.53 3.53 45.91 6.01
2477 5927 1.815421 ATGGCGTTCGGCTCATGAC 60.815 57.895 18.41 0.00 42.94 3.06
2478 5928 1.815003 CATGGCGTTCGGCTCATGA 60.815 57.895 18.41 0.00 45.42 3.07
2479 5929 1.769098 CTCATGGCGTTCGGCTCATG 61.769 60.000 18.41 14.31 44.67 3.07
2480 5930 1.522355 CTCATGGCGTTCGGCTCAT 60.522 57.895 18.41 3.41 42.94 2.90
2481 5931 2.125552 CTCATGGCGTTCGGCTCA 60.126 61.111 18.41 1.10 42.94 4.26
2482 5932 3.567797 GCTCATGGCGTTCGGCTC 61.568 66.667 18.41 1.36 42.94 4.70
2485 5935 2.892425 GAGGCTCATGGCGTTCGG 60.892 66.667 10.25 0.00 44.18 4.30
2486 5936 3.257561 CGAGGCTCATGGCGTTCG 61.258 66.667 15.95 13.12 44.18 3.95
2487 5937 2.892425 CCGAGGCTCATGGCGTTC 60.892 66.667 15.95 0.00 44.18 3.95
2488 5938 3.390521 TCCGAGGCTCATGGCGTT 61.391 61.111 15.95 0.00 44.18 4.84
2489 5939 4.148825 GTCCGAGGCTCATGGCGT 62.149 66.667 15.95 0.00 44.18 5.68
2491 5941 3.781770 CTCGTCCGAGGCTCATGGC 62.782 68.421 15.95 5.42 38.51 4.40
2492 5942 2.415010 CTCGTCCGAGGCTCATGG 59.585 66.667 15.95 8.74 38.51 3.66
2493 5943 2.279120 GCTCGTCCGAGGCTCATG 60.279 66.667 15.95 4.95 42.19 3.07
2494 5944 2.351244 TTGCTCGTCCGAGGCTCAT 61.351 57.895 15.95 0.00 42.19 2.90
2495 5945 2.989253 TTGCTCGTCCGAGGCTCA 60.989 61.111 15.95 5.29 42.19 4.26
2496 5946 2.507324 GTTGCTCGTCCGAGGCTC 60.507 66.667 17.50 3.87 42.19 4.70
2497 5947 2.992114 AGTTGCTCGTCCGAGGCT 60.992 61.111 17.50 0.00 42.19 4.58
2498 5948 2.811317 CAGTTGCTCGTCCGAGGC 60.811 66.667 17.50 10.58 42.19 4.70
2499 5949 2.811317 GCAGTTGCTCGTCCGAGG 60.811 66.667 17.50 2.67 42.19 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.