Multiple sequence alignment - TraesCS1B01G174900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G174900 chr1B 100.000 3819 0 0 1 3819 315392017 315388199 0.000000e+00 7053.0
1 TraesCS1B01G174900 chr1B 74.217 415 89 14 159 563 171036478 171036072 1.420000e-34 158.0
2 TraesCS1B01G174900 chr1D 95.129 2217 63 20 696 2900 220419755 220421938 0.000000e+00 3454.0
3 TraesCS1B01G174900 chr1D 91.532 744 30 7 2927 3666 416295999 416296713 0.000000e+00 994.0
4 TraesCS1B01G174900 chr1D 82.670 352 47 9 233 579 490403409 490403067 2.230000e-77 300.0
5 TraesCS1B01G174900 chr1D 85.377 212 27 4 17 226 467617612 467617403 2.310000e-52 217.0
6 TraesCS1B01G174900 chr1D 100.000 31 0 0 2715 2745 220421817 220421847 1.480000e-04 58.4
7 TraesCS1B01G174900 chr1A 92.262 2171 93 27 774 2929 284320266 284322376 0.000000e+00 3009.0
8 TraesCS1B01G174900 chr1A 88.992 863 53 15 2929 3776 509773190 509772355 0.000000e+00 1029.0
9 TraesCS1B01G174900 chr1A 87.793 852 52 13 2929 3776 509489888 509489085 0.000000e+00 950.0
10 TraesCS1B01G174900 chr1A 87.808 853 51 10 2929 3776 509700405 509699601 0.000000e+00 950.0
11 TraesCS1B01G174900 chr1A 87.056 394 42 6 174 567 284282438 284282822 1.630000e-118 436.0
12 TraesCS1B01G174900 chr1A 83.500 200 30 3 16 213 361273971 361274169 2.340000e-42 183.0
13 TraesCS1B01G174900 chr1A 100.000 28 0 0 2718 2745 284322224 284322251 7.000000e-03 52.8
14 TraesCS1B01G174900 chr5D 87.640 1610 148 33 1093 2675 403155586 403154001 0.000000e+00 1823.0
15 TraesCS1B01G174900 chr5D 91.134 970 84 2 1078 2046 404188418 404189386 0.000000e+00 1314.0
16 TraesCS1B01G174900 chr5D 87.432 549 60 6 2117 2665 404189481 404190020 1.170000e-174 623.0
17 TraesCS1B01G174900 chr5D 79.008 262 33 13 318 579 391805727 391805966 3.950000e-35 159.0
18 TraesCS1B01G174900 chr5D 77.326 172 26 10 339 505 434028184 434028347 5.250000e-14 89.8
19 TraesCS1B01G174900 chr7B 94.118 901 28 4 2923 3819 107611359 107612238 0.000000e+00 1347.0
20 TraesCS1B01G174900 chr7B 86.161 896 106 14 1072 1958 535633821 535634707 0.000000e+00 952.0
21 TraesCS1B01G174900 chr5B 91.358 972 82 2 1076 2046 484645011 484644041 0.000000e+00 1328.0
22 TraesCS1B01G174900 chr5B 87.914 695 37 9 3127 3819 273445039 273444390 0.000000e+00 774.0
23 TraesCS1B01G174900 chr5B 87.432 549 48 11 2117 2665 484643945 484643418 2.520000e-171 612.0
24 TraesCS1B01G174900 chr5B 81.081 222 39 2 8 227 712875735 712875515 1.410000e-39 174.0
25 TraesCS1B01G174900 chr5A 91.349 971 80 4 1078 2046 510883705 510884673 0.000000e+00 1325.0
26 TraesCS1B01G174900 chr5A 90.900 956 83 4 1093 2046 510015622 510014669 0.000000e+00 1280.0
27 TraesCS1B01G174900 chr5A 87.085 542 49 11 2121 2662 510884776 510885296 9.130000e-166 593.0
28 TraesCS1B01G174900 chr2D 91.113 979 77 3 1072 2049 336653643 336654612 0.000000e+00 1317.0
29 TraesCS1B01G174900 chr2D 86.985 461 50 9 2114 2568 336654724 336655180 9.460000e-141 510.0
30 TraesCS1B01G174900 chr2D 100.000 31 0 0 175 205 175807217 175807187 1.480000e-04 58.4
31 TraesCS1B01G174900 chr2A 89.736 984 78 9 1072 2053 446998000 446998962 0.000000e+00 1236.0
32 TraesCS1B01G174900 chr2A 89.123 570 54 6 2114 2679 446999064 446999629 0.000000e+00 702.0
33 TraesCS1B01G174900 chr2A 81.375 349 59 4 235 582 197254909 197254566 2.910000e-71 279.0
34 TraesCS1B01G174900 chr2B 89.509 896 42 15 2927 3819 680085434 680084588 0.000000e+00 1086.0
35 TraesCS1B01G174900 chr2B 87.681 552 58 7 2114 2661 404183973 404184518 5.380000e-178 634.0
36 TraesCS1B01G174900 chr2B 83.395 271 39 4 313 582 777141510 777141245 2.950000e-61 246.0
37 TraesCS1B01G174900 chr3B 95.613 661 24 3 2929 3585 542493302 542492643 0.000000e+00 1055.0
38 TraesCS1B01G174900 chr3B 91.349 289 4 2 3532 3819 542492652 542492384 3.600000e-100 375.0
39 TraesCS1B01G174900 chr6B 88.616 896 49 7 2929 3819 563126087 563126934 0.000000e+00 1040.0
40 TraesCS1B01G174900 chr4A 87.556 900 60 10 2924 3819 248560704 248561555 0.000000e+00 994.0
41 TraesCS1B01G174900 chr6D 89.892 742 42 7 2929 3666 152998295 152997583 0.000000e+00 924.0
42 TraesCS1B01G174900 chr6D 95.181 83 4 0 2547 2629 97928800 97928718 8.610000e-27 132.0
43 TraesCS1B01G174900 chr6D 82.781 151 19 4 313 463 472265641 472265498 1.110000e-25 128.0
44 TraesCS1B01G174900 chr3D 90.116 688 40 6 3131 3817 602100895 602100235 0.000000e+00 869.0
45 TraesCS1B01G174900 chr6A 92.115 558 24 1 3262 3819 525006689 525007226 0.000000e+00 769.0
46 TraesCS1B01G174900 chr6A 81.988 694 119 6 1348 2038 117005165 117004475 5.500000e-163 584.0
47 TraesCS1B01G174900 chr6A 91.566 83 7 0 2547 2629 117004078 117003996 8.670000e-22 115.0
48 TraesCS1B01G174900 chr6A 90.361 83 8 0 2547 2629 117002226 117002144 4.030000e-20 110.0
49 TraesCS1B01G174900 chr4B 85.891 567 47 7 2924 3487 173316014 173315478 1.190000e-159 573.0
50 TraesCS1B01G174900 chr4B 90.476 336 12 6 3484 3819 173306823 173306508 3.530000e-115 425.0
51 TraesCS1B01G174900 chr4B 83.412 211 31 4 9 217 168186225 168186017 3.890000e-45 193.0
52 TraesCS1B01G174900 chr7A 90.537 391 15 3 3429 3819 8248411 8248779 7.370000e-137 497.0
53 TraesCS1B01G174900 chr7A 74.877 203 45 5 321 521 512150403 512150205 1.890000e-13 87.9
54 TraesCS1B01G174900 chr7D 76.152 369 68 14 313 668 603391433 603391072 3.920000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G174900 chr1B 315388199 315392017 3818 True 7053.000000 7053 100.000000 1 3819 1 chr1B.!!$R2 3818
1 TraesCS1B01G174900 chr1D 220419755 220421938 2183 False 1756.200000 3454 97.564500 696 2900 2 chr1D.!!$F2 2204
2 TraesCS1B01G174900 chr1D 416295999 416296713 714 False 994.000000 994 91.532000 2927 3666 1 chr1D.!!$F1 739
3 TraesCS1B01G174900 chr1A 284320266 284322376 2110 False 1530.900000 3009 96.131000 774 2929 2 chr1A.!!$F3 2155
4 TraesCS1B01G174900 chr1A 509772355 509773190 835 True 1029.000000 1029 88.992000 2929 3776 1 chr1A.!!$R3 847
5 TraesCS1B01G174900 chr1A 509489085 509489888 803 True 950.000000 950 87.793000 2929 3776 1 chr1A.!!$R1 847
6 TraesCS1B01G174900 chr1A 509699601 509700405 804 True 950.000000 950 87.808000 2929 3776 1 chr1A.!!$R2 847
7 TraesCS1B01G174900 chr5D 403154001 403155586 1585 True 1823.000000 1823 87.640000 1093 2675 1 chr5D.!!$R1 1582
8 TraesCS1B01G174900 chr5D 404188418 404190020 1602 False 968.500000 1314 89.283000 1078 2665 2 chr5D.!!$F3 1587
9 TraesCS1B01G174900 chr7B 107611359 107612238 879 False 1347.000000 1347 94.118000 2923 3819 1 chr7B.!!$F1 896
10 TraesCS1B01G174900 chr7B 535633821 535634707 886 False 952.000000 952 86.161000 1072 1958 1 chr7B.!!$F2 886
11 TraesCS1B01G174900 chr5B 484643418 484645011 1593 True 970.000000 1328 89.395000 1076 2665 2 chr5B.!!$R3 1589
12 TraesCS1B01G174900 chr5B 273444390 273445039 649 True 774.000000 774 87.914000 3127 3819 1 chr5B.!!$R1 692
13 TraesCS1B01G174900 chr5A 510014669 510015622 953 True 1280.000000 1280 90.900000 1093 2046 1 chr5A.!!$R1 953
14 TraesCS1B01G174900 chr5A 510883705 510885296 1591 False 959.000000 1325 89.217000 1078 2662 2 chr5A.!!$F1 1584
15 TraesCS1B01G174900 chr2D 336653643 336655180 1537 False 913.500000 1317 89.049000 1072 2568 2 chr2D.!!$F1 1496
16 TraesCS1B01G174900 chr2A 446998000 446999629 1629 False 969.000000 1236 89.429500 1072 2679 2 chr2A.!!$F1 1607
17 TraesCS1B01G174900 chr2B 680084588 680085434 846 True 1086.000000 1086 89.509000 2927 3819 1 chr2B.!!$R1 892
18 TraesCS1B01G174900 chr2B 404183973 404184518 545 False 634.000000 634 87.681000 2114 2661 1 chr2B.!!$F1 547
19 TraesCS1B01G174900 chr3B 542492384 542493302 918 True 715.000000 1055 93.481000 2929 3819 2 chr3B.!!$R1 890
20 TraesCS1B01G174900 chr6B 563126087 563126934 847 False 1040.000000 1040 88.616000 2929 3819 1 chr6B.!!$F1 890
21 TraesCS1B01G174900 chr4A 248560704 248561555 851 False 994.000000 994 87.556000 2924 3819 1 chr4A.!!$F1 895
22 TraesCS1B01G174900 chr6D 152997583 152998295 712 True 924.000000 924 89.892000 2929 3666 1 chr6D.!!$R2 737
23 TraesCS1B01G174900 chr3D 602100235 602100895 660 True 869.000000 869 90.116000 3131 3817 1 chr3D.!!$R1 686
24 TraesCS1B01G174900 chr6A 525006689 525007226 537 False 769.000000 769 92.115000 3262 3819 1 chr6A.!!$F1 557
25 TraesCS1B01G174900 chr6A 117002144 117005165 3021 True 269.666667 584 87.971667 1348 2629 3 chr6A.!!$R1 1281
26 TraesCS1B01G174900 chr4B 173315478 173316014 536 True 573.000000 573 85.891000 2924 3487 1 chr4B.!!$R3 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 0.035630 CCTCTGGTCCTCTGCTTTGG 60.036 60.000 0.0 0.0 0.00 3.28 F
56 57 0.035630 CTGGTCCTCTGCTTTGGGAG 60.036 60.000 0.0 0.0 0.00 4.30 F
58 59 0.035915 GGTCCTCTGCTTTGGGAGAC 60.036 60.000 0.0 0.0 35.01 3.36 F
588 589 0.039074 CGTCTCGAAGTTGTCAGGCT 60.039 55.000 0.0 0.0 0.00 4.58 F
731 732 0.172578 TAGCATTGGTCGTGGTCGAG 59.827 55.000 0.0 0.0 46.96 4.04 F
1048 1068 0.246635 GCTGGTTCTGCTTCTCCGTA 59.753 55.000 0.0 0.0 0.00 4.02 F
1367 1393 1.137872 CTCCTCTACGCCAAGCTCATT 59.862 52.381 0.0 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2024 2051 0.313987 CCTGTGTCTCGTACTGCACA 59.686 55.000 0.00 0.0 39.21 4.57 R
2047 2078 6.422701 GGTTTAAGCACATGCATACGTAGATA 59.577 38.462 6.64 0.0 45.16 1.98 R
2078 2162 2.679336 TGCATGAGATTGATGGAACGTG 59.321 45.455 0.00 0.0 0.00 4.49 R
2235 2384 1.424493 CGGCCATCTTCTGCTCGAAC 61.424 60.000 2.24 0.0 0.00 3.95 R
2686 2844 2.037902 TGACGAGTCTTGGCACCAAATA 59.962 45.455 3.29 0.0 35.33 1.40 R
2746 2944 2.158726 CGGGCCCTAAAGCAACCTAATA 60.159 50.000 22.43 0.0 0.00 0.98 R
2909 3170 4.231890 TGCCCTTTTTATATGGGGAGAACT 59.768 41.667 0.00 0.0 40.77 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.282838 TCCCAGTCACCTCCTCCA 58.717 61.111 0.00 0.00 0.00 3.86
18 19 1.790541 TCCCAGTCACCTCCTCCAT 59.209 57.895 0.00 0.00 0.00 3.41
19 20 0.618680 TCCCAGTCACCTCCTCCATG 60.619 60.000 0.00 0.00 0.00 3.66
20 21 0.618680 CCCAGTCACCTCCTCCATGA 60.619 60.000 0.00 0.00 0.00 3.07
21 22 0.829333 CCAGTCACCTCCTCCATGAG 59.171 60.000 0.00 0.00 0.00 2.90
22 23 0.177604 CAGTCACCTCCTCCATGAGC 59.822 60.000 0.00 0.00 0.00 4.26
23 24 1.142748 GTCACCTCCTCCATGAGCG 59.857 63.158 0.00 0.00 0.00 5.03
24 25 2.202987 CACCTCCTCCATGAGCGC 60.203 66.667 0.00 0.00 0.00 5.92
25 26 2.685017 ACCTCCTCCATGAGCGCA 60.685 61.111 11.47 0.00 0.00 6.09
26 27 2.108566 CCTCCTCCATGAGCGCAG 59.891 66.667 11.47 0.00 0.00 5.18
27 28 2.108566 CTCCTCCATGAGCGCAGG 59.891 66.667 11.47 6.51 0.00 4.85
28 29 4.166888 TCCTCCATGAGCGCAGGC 62.167 66.667 11.47 0.00 40.37 4.85
30 31 4.519437 CTCCATGAGCGCAGGCGA 62.519 66.667 18.96 0.00 46.35 5.54
31 32 4.819761 TCCATGAGCGCAGGCGAC 62.820 66.667 18.96 10.74 46.35 5.19
33 34 3.561213 CATGAGCGCAGGCGACAG 61.561 66.667 18.96 7.00 46.35 3.51
44 45 3.386237 GCGACAGCCTCTGGTCCT 61.386 66.667 0.00 0.00 35.51 3.85
45 46 2.888863 CGACAGCCTCTGGTCCTC 59.111 66.667 0.00 0.00 35.51 3.71
46 47 1.680651 CGACAGCCTCTGGTCCTCT 60.681 63.158 0.00 0.00 35.51 3.69
47 48 1.896694 GACAGCCTCTGGTCCTCTG 59.103 63.158 0.00 0.00 35.51 3.35
48 49 2.237534 GACAGCCTCTGGTCCTCTGC 62.238 65.000 0.00 0.00 35.51 4.26
49 50 1.988956 CAGCCTCTGGTCCTCTGCT 60.989 63.158 0.00 0.00 0.00 4.24
50 51 1.229464 AGCCTCTGGTCCTCTGCTT 60.229 57.895 0.00 0.00 0.00 3.91
51 52 0.839853 AGCCTCTGGTCCTCTGCTTT 60.840 55.000 0.00 0.00 0.00 3.51
52 53 0.676151 GCCTCTGGTCCTCTGCTTTG 60.676 60.000 0.00 0.00 0.00 2.77
53 54 0.035630 CCTCTGGTCCTCTGCTTTGG 60.036 60.000 0.00 0.00 0.00 3.28
54 55 0.035630 CTCTGGTCCTCTGCTTTGGG 60.036 60.000 0.00 0.00 0.00 4.12
55 56 0.473694 TCTGGTCCTCTGCTTTGGGA 60.474 55.000 0.00 0.00 0.00 4.37
56 57 0.035630 CTGGTCCTCTGCTTTGGGAG 60.036 60.000 0.00 0.00 0.00 4.30
57 58 0.473694 TGGTCCTCTGCTTTGGGAGA 60.474 55.000 0.00 0.00 37.58 3.71
58 59 0.035915 GGTCCTCTGCTTTGGGAGAC 60.036 60.000 0.00 0.00 35.01 3.36
59 60 0.390472 GTCCTCTGCTTTGGGAGACG 60.390 60.000 0.00 0.00 35.01 4.18
60 61 0.541998 TCCTCTGCTTTGGGAGACGA 60.542 55.000 0.00 0.00 35.01 4.20
61 62 0.390472 CCTCTGCTTTGGGAGACGAC 60.390 60.000 0.00 0.00 35.01 4.34
62 63 0.734253 CTCTGCTTTGGGAGACGACG 60.734 60.000 0.00 0.00 35.01 5.12
63 64 1.176619 TCTGCTTTGGGAGACGACGA 61.177 55.000 0.00 0.00 35.01 4.20
64 65 1.006571 TGCTTTGGGAGACGACGAC 60.007 57.895 0.00 0.00 0.00 4.34
65 66 1.006571 GCTTTGGGAGACGACGACA 60.007 57.895 0.00 0.00 0.00 4.35
66 67 1.282930 GCTTTGGGAGACGACGACAC 61.283 60.000 0.00 0.00 0.00 3.67
67 68 1.002250 CTTTGGGAGACGACGACACG 61.002 60.000 0.00 0.00 39.31 4.49
69 70 2.126965 GGGAGACGACGACACGTG 60.127 66.667 15.48 15.48 46.52 4.49
70 71 2.635899 GGAGACGACGACACGTGT 59.364 61.111 23.64 23.64 46.52 4.49
71 72 1.724929 GGAGACGACGACACGTGTG 60.725 63.158 28.82 19.89 46.52 3.82
72 73 1.724929 GAGACGACGACACGTGTGG 60.725 63.158 28.82 27.50 46.52 4.17
73 74 3.392440 GACGACGACACGTGTGGC 61.392 66.667 28.82 18.99 46.52 5.01
83 84 2.935955 CGTGTGGCGTGTTCCTTC 59.064 61.111 0.00 0.00 35.54 3.46
84 85 1.594293 CGTGTGGCGTGTTCCTTCT 60.594 57.895 0.00 0.00 35.54 2.85
85 86 1.157870 CGTGTGGCGTGTTCCTTCTT 61.158 55.000 0.00 0.00 35.54 2.52
86 87 0.307760 GTGTGGCGTGTTCCTTCTTG 59.692 55.000 0.00 0.00 0.00 3.02
87 88 0.179234 TGTGGCGTGTTCCTTCTTGA 59.821 50.000 0.00 0.00 0.00 3.02
88 89 1.305201 GTGGCGTGTTCCTTCTTGAA 58.695 50.000 0.00 0.00 0.00 2.69
89 90 1.264288 GTGGCGTGTTCCTTCTTGAAG 59.736 52.381 3.55 3.55 0.00 3.02
90 91 0.875059 GGCGTGTTCCTTCTTGAAGG 59.125 55.000 20.21 20.21 41.35 3.46
91 92 0.238553 GCGTGTTCCTTCTTGAAGGC 59.761 55.000 21.16 11.08 39.80 4.35
92 93 0.512952 CGTGTTCCTTCTTGAAGGCG 59.487 55.000 21.16 15.60 39.80 5.52
93 94 1.594331 GTGTTCCTTCTTGAAGGCGT 58.406 50.000 21.16 0.00 39.80 5.68
94 95 1.531578 GTGTTCCTTCTTGAAGGCGTC 59.468 52.381 21.16 14.47 39.80 5.19
95 96 0.790814 GTTCCTTCTTGAAGGCGTCG 59.209 55.000 21.16 1.77 39.80 5.12
96 97 0.320421 TTCCTTCTTGAAGGCGTCGG 60.320 55.000 21.16 1.85 39.80 4.79
97 98 2.391389 CCTTCTTGAAGGCGTCGGC 61.391 63.158 15.43 11.43 38.90 5.54
112 113 4.864334 GGCCGGGGACTGCTCATG 62.864 72.222 2.18 0.00 40.83 3.07
113 114 3.785859 GCCGGGGACTGCTCATGA 61.786 66.667 2.18 0.00 37.61 3.07
114 115 3.112205 GCCGGGGACTGCTCATGAT 62.112 63.158 2.18 0.00 37.61 2.45
115 116 1.227764 CCGGGGACTGCTCATGATG 60.228 63.158 0.00 0.00 0.00 3.07
116 117 1.227764 CGGGGACTGCTCATGATGG 60.228 63.158 0.00 0.00 0.00 3.51
117 118 1.918253 GGGGACTGCTCATGATGGT 59.082 57.895 0.00 0.00 0.00 3.55
118 119 0.465097 GGGGACTGCTCATGATGGTG 60.465 60.000 0.00 0.00 0.00 4.17
119 120 0.465097 GGGACTGCTCATGATGGTGG 60.465 60.000 0.00 0.00 0.00 4.61
120 121 0.543277 GGACTGCTCATGATGGTGGA 59.457 55.000 0.00 0.00 0.00 4.02
121 122 1.474677 GGACTGCTCATGATGGTGGAG 60.475 57.143 0.00 0.00 0.00 3.86
122 123 1.209019 GACTGCTCATGATGGTGGAGT 59.791 52.381 11.51 11.51 0.00 3.85
123 124 1.632409 ACTGCTCATGATGGTGGAGTT 59.368 47.619 0.00 0.00 0.00 3.01
124 125 2.014857 CTGCTCATGATGGTGGAGTTG 58.985 52.381 0.00 0.00 0.00 3.16
125 126 0.737219 GCTCATGATGGTGGAGTTGC 59.263 55.000 0.00 0.00 0.00 4.17
126 127 1.681166 GCTCATGATGGTGGAGTTGCT 60.681 52.381 0.00 0.00 0.00 3.91
127 128 2.014857 CTCATGATGGTGGAGTTGCTG 58.985 52.381 0.00 0.00 0.00 4.41
128 129 1.100510 CATGATGGTGGAGTTGCTGG 58.899 55.000 0.00 0.00 0.00 4.85
129 130 0.700564 ATGATGGTGGAGTTGCTGGT 59.299 50.000 0.00 0.00 0.00 4.00
130 131 0.250858 TGATGGTGGAGTTGCTGGTG 60.251 55.000 0.00 0.00 0.00 4.17
131 132 0.962356 GATGGTGGAGTTGCTGGTGG 60.962 60.000 0.00 0.00 0.00 4.61
132 133 1.719063 ATGGTGGAGTTGCTGGTGGT 61.719 55.000 0.00 0.00 0.00 4.16
133 134 1.152756 GGTGGAGTTGCTGGTGGTT 60.153 57.895 0.00 0.00 0.00 3.67
134 135 0.755327 GGTGGAGTTGCTGGTGGTTT 60.755 55.000 0.00 0.00 0.00 3.27
135 136 0.385390 GTGGAGTTGCTGGTGGTTTG 59.615 55.000 0.00 0.00 0.00 2.93
136 137 0.754957 TGGAGTTGCTGGTGGTTTGG 60.755 55.000 0.00 0.00 0.00 3.28
137 138 0.467290 GGAGTTGCTGGTGGTTTGGA 60.467 55.000 0.00 0.00 0.00 3.53
138 139 0.954452 GAGTTGCTGGTGGTTTGGAG 59.046 55.000 0.00 0.00 0.00 3.86
139 140 0.258774 AGTTGCTGGTGGTTTGGAGT 59.741 50.000 0.00 0.00 0.00 3.85
140 141 0.668535 GTTGCTGGTGGTTTGGAGTC 59.331 55.000 0.00 0.00 0.00 3.36
141 142 0.817634 TTGCTGGTGGTTTGGAGTCG 60.818 55.000 0.00 0.00 0.00 4.18
142 143 1.966451 GCTGGTGGTTTGGAGTCGG 60.966 63.158 0.00 0.00 0.00 4.79
143 144 1.966451 CTGGTGGTTTGGAGTCGGC 60.966 63.158 0.00 0.00 0.00 5.54
144 145 3.047877 GGTGGTTTGGAGTCGGCG 61.048 66.667 0.00 0.00 0.00 6.46
145 146 2.029964 GTGGTTTGGAGTCGGCGA 59.970 61.111 4.99 4.99 0.00 5.54
146 147 2.027625 GTGGTTTGGAGTCGGCGAG 61.028 63.158 11.20 0.00 0.00 5.03
147 148 2.204461 TGGTTTGGAGTCGGCGAGA 61.204 57.895 11.20 0.00 0.00 4.04
148 149 1.446272 GGTTTGGAGTCGGCGAGAG 60.446 63.158 11.20 0.00 0.00 3.20
149 150 1.585006 GTTTGGAGTCGGCGAGAGA 59.415 57.895 11.20 0.00 0.00 3.10
150 151 0.173708 GTTTGGAGTCGGCGAGAGAT 59.826 55.000 11.20 0.00 0.00 2.75
151 152 0.173481 TTTGGAGTCGGCGAGAGATG 59.827 55.000 11.20 0.00 0.00 2.90
152 153 1.667154 TTGGAGTCGGCGAGAGATGG 61.667 60.000 11.20 0.00 0.00 3.51
153 154 2.122167 GGAGTCGGCGAGAGATGGT 61.122 63.158 11.20 0.00 0.00 3.55
154 155 1.357334 GAGTCGGCGAGAGATGGTC 59.643 63.158 11.20 0.00 0.00 4.02
155 156 1.077357 AGTCGGCGAGAGATGGTCT 60.077 57.895 11.20 0.00 38.71 3.85
156 157 1.064946 GTCGGCGAGAGATGGTCTG 59.935 63.158 11.20 0.00 34.71 3.51
157 158 1.378646 TCGGCGAGAGATGGTCTGT 60.379 57.895 4.99 0.00 34.71 3.41
158 159 0.107361 TCGGCGAGAGATGGTCTGTA 60.107 55.000 4.99 0.00 34.71 2.74
159 160 0.309302 CGGCGAGAGATGGTCTGTAG 59.691 60.000 0.00 0.00 34.71 2.74
160 161 0.671251 GGCGAGAGATGGTCTGTAGG 59.329 60.000 0.00 0.00 34.71 3.18
161 162 1.394618 GCGAGAGATGGTCTGTAGGT 58.605 55.000 0.00 0.00 34.71 3.08
162 163 1.066303 GCGAGAGATGGTCTGTAGGTG 59.934 57.143 0.00 0.00 34.71 4.00
163 164 1.678627 CGAGAGATGGTCTGTAGGTGG 59.321 57.143 0.00 0.00 34.71 4.61
164 165 2.684038 CGAGAGATGGTCTGTAGGTGGA 60.684 54.545 0.00 0.00 34.71 4.02
165 166 2.955660 GAGAGATGGTCTGTAGGTGGAG 59.044 54.545 0.00 0.00 34.71 3.86
166 167 2.313342 AGAGATGGTCTGTAGGTGGAGT 59.687 50.000 0.00 0.00 32.57 3.85
167 168 2.428890 GAGATGGTCTGTAGGTGGAGTG 59.571 54.545 0.00 0.00 0.00 3.51
168 169 1.482593 GATGGTCTGTAGGTGGAGTGG 59.517 57.143 0.00 0.00 0.00 4.00
169 170 1.192146 TGGTCTGTAGGTGGAGTGGC 61.192 60.000 0.00 0.00 0.00 5.01
170 171 1.597461 GTCTGTAGGTGGAGTGGCC 59.403 63.158 0.00 0.00 37.10 5.36
171 172 0.905337 GTCTGTAGGTGGAGTGGCCT 60.905 60.000 3.32 0.00 38.81 5.19
172 173 0.904865 TCTGTAGGTGGAGTGGCCTG 60.905 60.000 3.32 0.00 36.38 4.85
173 174 0.904865 CTGTAGGTGGAGTGGCCTGA 60.905 60.000 3.32 0.00 36.38 3.86
174 175 1.192146 TGTAGGTGGAGTGGCCTGAC 61.192 60.000 3.32 0.00 36.38 3.51
175 176 1.157513 TAGGTGGAGTGGCCTGACA 59.842 57.895 3.32 0.00 36.38 3.58
176 177 0.252696 TAGGTGGAGTGGCCTGACAT 60.253 55.000 3.32 0.00 36.38 3.06
177 178 1.078143 GGTGGAGTGGCCTGACATC 60.078 63.158 3.32 0.00 37.63 3.06
178 179 1.557269 GGTGGAGTGGCCTGACATCT 61.557 60.000 3.32 0.00 37.63 2.90
179 180 1.195115 GTGGAGTGGCCTGACATCTA 58.805 55.000 3.32 0.00 37.63 1.98
180 181 1.134670 GTGGAGTGGCCTGACATCTAC 60.135 57.143 3.32 0.00 37.63 2.59
181 182 0.466124 GGAGTGGCCTGACATCTACC 59.534 60.000 3.32 0.00 0.00 3.18
182 183 0.103208 GAGTGGCCTGACATCTACCG 59.897 60.000 3.32 0.00 0.00 4.02
183 184 1.521681 GTGGCCTGACATCTACCGC 60.522 63.158 3.32 0.00 0.00 5.68
184 185 2.279517 GGCCTGACATCTACCGCG 60.280 66.667 0.00 0.00 0.00 6.46
185 186 2.494918 GCCTGACATCTACCGCGT 59.505 61.111 4.92 0.00 0.00 6.01
186 187 1.153628 GCCTGACATCTACCGCGTT 60.154 57.895 4.92 0.00 0.00 4.84
187 188 1.421410 GCCTGACATCTACCGCGTTG 61.421 60.000 4.92 0.00 0.00 4.10
188 189 0.172578 CCTGACATCTACCGCGTTGA 59.827 55.000 4.92 0.00 0.00 3.18
189 190 1.269166 CTGACATCTACCGCGTTGAC 58.731 55.000 4.92 0.00 0.00 3.18
190 191 0.455464 TGACATCTACCGCGTTGACG 60.455 55.000 4.92 0.00 43.27 4.35
191 192 0.179181 GACATCTACCGCGTTGACGA 60.179 55.000 4.92 0.00 43.02 4.20
192 193 0.455633 ACATCTACCGCGTTGACGAC 60.456 55.000 4.92 0.00 43.02 4.34
201 202 2.732658 GTTGACGACGGTGGGTCT 59.267 61.111 0.00 0.00 43.79 3.85
202 203 1.068585 GTTGACGACGGTGGGTCTT 59.931 57.895 0.00 0.00 43.79 3.01
203 204 1.068417 TTGACGACGGTGGGTCTTG 59.932 57.895 0.00 0.00 43.79 3.02
204 205 2.048503 GACGACGGTGGGTCTTGG 60.049 66.667 0.00 0.00 43.79 3.61
205 206 2.841044 ACGACGGTGGGTCTTGGT 60.841 61.111 0.00 0.00 43.79 3.67
206 207 2.357034 CGACGGTGGGTCTTGGTG 60.357 66.667 0.00 0.00 43.79 4.17
207 208 2.032071 GACGGTGGGTCTTGGTGG 59.968 66.667 0.00 0.00 42.62 4.61
208 209 4.265056 ACGGTGGGTCTTGGTGGC 62.265 66.667 0.00 0.00 0.00 5.01
209 210 4.263572 CGGTGGGTCTTGGTGGCA 62.264 66.667 0.00 0.00 0.00 4.92
210 211 2.440599 GGTGGGTCTTGGTGGCAT 59.559 61.111 0.00 0.00 0.00 4.40
211 212 1.978617 GGTGGGTCTTGGTGGCATG 60.979 63.158 0.00 0.00 0.00 4.06
212 213 1.978617 GTGGGTCTTGGTGGCATGG 60.979 63.158 0.00 0.00 0.00 3.66
213 214 2.440599 GGGTCTTGGTGGCATGGT 59.559 61.111 0.00 0.00 0.00 3.55
214 215 1.978617 GGGTCTTGGTGGCATGGTG 60.979 63.158 0.00 0.00 0.00 4.17
215 216 2.639327 GGTCTTGGTGGCATGGTGC 61.639 63.158 0.00 0.00 44.08 5.01
225 226 3.473147 GCATGGTGCAGATGAGTCT 57.527 52.632 9.40 0.00 44.26 3.24
226 227 1.297664 GCATGGTGCAGATGAGTCTC 58.702 55.000 9.40 0.00 44.26 3.36
227 228 1.134461 GCATGGTGCAGATGAGTCTCT 60.134 52.381 9.40 0.00 44.26 3.10
228 229 2.823984 CATGGTGCAGATGAGTCTCTC 58.176 52.381 0.65 0.00 30.42 3.20
229 230 1.928868 TGGTGCAGATGAGTCTCTCA 58.071 50.000 0.65 1.92 44.99 3.27
230 231 1.823610 TGGTGCAGATGAGTCTCTCAG 59.176 52.381 0.65 0.00 44.08 3.35
231 232 1.471327 GGTGCAGATGAGTCTCTCAGC 60.471 57.143 6.88 6.88 45.85 4.26
234 235 4.728058 GATGAGTCTCTCAGCGGC 57.272 61.111 0.65 0.00 44.08 6.53
235 236 1.299014 GATGAGTCTCTCAGCGGCG 60.299 63.158 0.51 0.51 44.08 6.46
236 237 2.676016 GATGAGTCTCTCAGCGGCGG 62.676 65.000 9.78 0.00 44.08 6.13
237 238 4.200283 GAGTCTCTCAGCGGCGGG 62.200 72.222 9.78 0.00 0.00 6.13
239 240 4.500116 GTCTCTCAGCGGCGGGTC 62.500 72.222 9.78 0.00 0.00 4.46
241 242 3.842923 CTCTCAGCGGCGGGTCAT 61.843 66.667 9.78 0.00 0.00 3.06
242 243 4.147449 TCTCAGCGGCGGGTCATG 62.147 66.667 9.78 0.00 0.00 3.07
251 252 3.891400 CGGGTCATGGCGGCATTG 61.891 66.667 23.47 17.12 0.00 2.82
252 253 2.755469 GGGTCATGGCGGCATTGT 60.755 61.111 23.47 0.00 0.00 2.71
253 254 2.491152 GGTCATGGCGGCATTGTG 59.509 61.111 23.47 13.47 0.00 3.33
254 255 2.202650 GTCATGGCGGCATTGTGC 60.203 61.111 23.47 8.76 44.08 4.57
264 265 2.552802 GCATTGTGCAGCTGAGTCT 58.447 52.632 20.43 0.00 44.26 3.24
265 266 0.447011 GCATTGTGCAGCTGAGTCTC 59.553 55.000 20.43 0.00 44.26 3.36
266 267 0.720027 CATTGTGCAGCTGAGTCTCG 59.280 55.000 20.43 0.00 0.00 4.04
267 268 0.390866 ATTGTGCAGCTGAGTCTCGG 60.391 55.000 20.43 4.11 0.00 4.63
276 277 4.933064 GAGTCTCGGCGGCGGATG 62.933 72.222 31.73 20.56 0.00 3.51
284 285 4.241555 GCGGCGGATGGTCTGGAT 62.242 66.667 9.78 0.00 0.00 3.41
285 286 2.280389 CGGCGGATGGTCTGGATG 60.280 66.667 0.00 0.00 0.00 3.51
286 287 2.111878 GGCGGATGGTCTGGATGG 59.888 66.667 0.00 0.00 0.00 3.51
287 288 2.443394 GGCGGATGGTCTGGATGGA 61.443 63.158 0.00 0.00 0.00 3.41
288 289 1.227674 GCGGATGGTCTGGATGGAC 60.228 63.158 0.00 0.00 35.66 4.02
289 290 1.068083 CGGATGGTCTGGATGGACG 59.932 63.158 0.00 0.00 37.12 4.79
290 291 1.391933 CGGATGGTCTGGATGGACGA 61.392 60.000 0.00 0.00 37.12 4.20
291 292 0.390860 GGATGGTCTGGATGGACGAG 59.609 60.000 0.00 0.00 37.12 4.18
292 293 0.249657 GATGGTCTGGATGGACGAGC 60.250 60.000 0.00 0.00 37.12 5.03
293 294 0.977627 ATGGTCTGGATGGACGAGCA 60.978 55.000 0.00 0.00 39.19 4.26
294 295 1.153549 GGTCTGGATGGACGAGCAC 60.154 63.158 0.00 0.00 37.12 4.40
295 296 1.591703 GTCTGGATGGACGAGCACA 59.408 57.895 0.00 0.00 0.00 4.57
296 297 0.459237 GTCTGGATGGACGAGCACAG 60.459 60.000 0.00 0.00 0.00 3.66
297 298 1.153489 CTGGATGGACGAGCACAGG 60.153 63.158 0.00 0.00 0.00 4.00
298 299 2.187946 GGATGGACGAGCACAGGG 59.812 66.667 0.00 0.00 0.00 4.45
299 300 2.512515 GATGGACGAGCACAGGGC 60.513 66.667 0.00 0.00 45.30 5.19
309 310 2.031919 CACAGGGCGGTTGTGCTA 59.968 61.111 3.11 0.00 39.43 3.49
310 311 1.377202 CACAGGGCGGTTGTGCTAT 60.377 57.895 3.11 0.00 39.43 2.97
311 312 0.960364 CACAGGGCGGTTGTGCTATT 60.960 55.000 3.11 0.00 39.43 1.73
312 313 0.251165 ACAGGGCGGTTGTGCTATTT 60.251 50.000 0.00 0.00 34.52 1.40
313 314 0.171007 CAGGGCGGTTGTGCTATTTG 59.829 55.000 0.00 0.00 34.52 2.32
314 315 0.965363 AGGGCGGTTGTGCTATTTGG 60.965 55.000 0.00 0.00 34.52 3.28
315 316 1.248101 GGGCGGTTGTGCTATTTGGT 61.248 55.000 0.00 0.00 34.52 3.67
316 317 0.109319 GGCGGTTGTGCTATTTGGTG 60.109 55.000 0.00 0.00 34.52 4.17
317 318 0.596082 GCGGTTGTGCTATTTGGTGT 59.404 50.000 0.00 0.00 0.00 4.16
318 319 1.401018 GCGGTTGTGCTATTTGGTGTC 60.401 52.381 0.00 0.00 0.00 3.67
319 320 1.136085 CGGTTGTGCTATTTGGTGTCG 60.136 52.381 0.00 0.00 0.00 4.35
320 321 1.877443 GGTTGTGCTATTTGGTGTCGT 59.123 47.619 0.00 0.00 0.00 4.34
321 322 2.350388 GGTTGTGCTATTTGGTGTCGTG 60.350 50.000 0.00 0.00 0.00 4.35
322 323 1.518325 TGTGCTATTTGGTGTCGTGG 58.482 50.000 0.00 0.00 0.00 4.94
323 324 1.202710 TGTGCTATTTGGTGTCGTGGT 60.203 47.619 0.00 0.00 0.00 4.16
324 325 1.196808 GTGCTATTTGGTGTCGTGGTG 59.803 52.381 0.00 0.00 0.00 4.17
325 326 1.070914 TGCTATTTGGTGTCGTGGTGA 59.929 47.619 0.00 0.00 0.00 4.02
334 335 2.635338 TCGTGGTGACGTCGACAG 59.365 61.111 17.16 10.90 46.20 3.51
335 336 3.097728 CGTGGTGACGTCGACAGC 61.098 66.667 17.16 17.78 40.91 4.40
336 337 2.027024 GTGGTGACGTCGACAGCA 59.973 61.111 22.13 22.13 42.16 4.41
337 338 2.016704 GTGGTGACGTCGACAGCAG 61.017 63.158 25.42 1.08 44.35 4.24
338 339 2.190841 TGGTGACGTCGACAGCAGA 61.191 57.895 22.13 4.45 40.10 4.26
339 340 1.213013 GGTGACGTCGACAGCAGAT 59.787 57.895 19.28 0.00 36.06 2.90
340 341 1.073216 GGTGACGTCGACAGCAGATG 61.073 60.000 19.28 0.00 36.06 2.90
341 342 0.109735 GTGACGTCGACAGCAGATGA 60.110 55.000 17.16 0.00 0.00 2.92
342 343 0.169009 TGACGTCGACAGCAGATGAG 59.831 55.000 17.16 0.00 0.00 2.90
343 344 0.448197 GACGTCGACAGCAGATGAGA 59.552 55.000 17.16 0.00 0.00 3.27
344 345 0.169230 ACGTCGACAGCAGATGAGAC 59.831 55.000 17.16 0.78 37.02 3.36
345 346 0.449786 CGTCGACAGCAGATGAGACT 59.550 55.000 17.16 0.00 37.69 3.24
346 347 1.793353 CGTCGACAGCAGATGAGACTG 60.793 57.143 17.16 0.00 37.69 3.51
347 348 0.813821 TCGACAGCAGATGAGACTGG 59.186 55.000 0.00 0.00 38.22 4.00
348 349 0.805322 CGACAGCAGATGAGACTGGC 60.805 60.000 0.00 0.00 38.22 4.85
349 350 0.248565 GACAGCAGATGAGACTGGCA 59.751 55.000 0.00 0.00 39.36 4.92
350 351 0.689055 ACAGCAGATGAGACTGGCAA 59.311 50.000 0.00 0.00 38.22 4.52
351 352 1.338864 ACAGCAGATGAGACTGGCAAG 60.339 52.381 0.00 0.00 38.22 4.01
352 353 1.066358 CAGCAGATGAGACTGGCAAGA 60.066 52.381 0.00 0.00 38.22 3.02
353 354 1.838715 AGCAGATGAGACTGGCAAGAT 59.161 47.619 0.00 0.00 38.22 2.40
354 355 2.158928 AGCAGATGAGACTGGCAAGATC 60.159 50.000 0.00 0.00 38.22 2.75
355 356 2.158928 GCAGATGAGACTGGCAAGATCT 60.159 50.000 0.00 0.00 38.22 2.75
356 357 3.069300 GCAGATGAGACTGGCAAGATCTA 59.931 47.826 0.00 0.00 38.22 1.98
357 358 4.262549 GCAGATGAGACTGGCAAGATCTAT 60.263 45.833 0.00 0.00 38.22 1.98
358 359 5.231702 CAGATGAGACTGGCAAGATCTATG 58.768 45.833 0.00 0.00 34.64 2.23
359 360 3.465742 TGAGACTGGCAAGATCTATGC 57.534 47.619 16.77 16.77 43.08 3.14
360 361 2.767960 TGAGACTGGCAAGATCTATGCA 59.232 45.455 22.72 12.92 45.60 3.96
361 362 3.198417 TGAGACTGGCAAGATCTATGCAA 59.802 43.478 22.72 15.32 45.60 4.08
362 363 4.141551 TGAGACTGGCAAGATCTATGCAAT 60.142 41.667 22.72 12.50 45.60 3.56
363 364 4.135306 AGACTGGCAAGATCTATGCAATG 58.865 43.478 22.72 16.34 45.60 2.82
364 365 4.132336 GACTGGCAAGATCTATGCAATGA 58.868 43.478 22.72 0.00 45.60 2.57
365 366 3.881688 ACTGGCAAGATCTATGCAATGAC 59.118 43.478 22.72 9.68 45.60 3.06
366 367 3.216800 TGGCAAGATCTATGCAATGACC 58.783 45.455 22.72 11.68 45.60 4.02
367 368 2.555757 GGCAAGATCTATGCAATGACCC 59.444 50.000 22.72 7.69 45.60 4.46
368 369 2.555757 GCAAGATCTATGCAATGACCCC 59.444 50.000 18.90 0.00 43.29 4.95
369 370 3.749954 GCAAGATCTATGCAATGACCCCT 60.750 47.826 18.90 0.00 43.29 4.79
370 371 4.070716 CAAGATCTATGCAATGACCCCTC 58.929 47.826 0.00 0.00 0.00 4.30
371 372 2.641815 AGATCTATGCAATGACCCCTCC 59.358 50.000 0.00 0.00 0.00 4.30
372 373 2.196742 TCTATGCAATGACCCCTCCT 57.803 50.000 0.00 0.00 0.00 3.69
373 374 1.770658 TCTATGCAATGACCCCTCCTG 59.229 52.381 0.00 0.00 0.00 3.86
374 375 1.770658 CTATGCAATGACCCCTCCTGA 59.229 52.381 0.00 0.00 0.00 3.86
375 376 1.002069 ATGCAATGACCCCTCCTGAA 58.998 50.000 0.00 0.00 0.00 3.02
376 377 0.329261 TGCAATGACCCCTCCTGAAG 59.671 55.000 0.00 0.00 0.00 3.02
377 378 0.620556 GCAATGACCCCTCCTGAAGA 59.379 55.000 0.00 0.00 0.00 2.87
378 379 1.213926 GCAATGACCCCTCCTGAAGAT 59.786 52.381 0.00 0.00 0.00 2.40
379 380 2.928334 CAATGACCCCTCCTGAAGATG 58.072 52.381 0.00 0.00 0.00 2.90
380 381 1.516110 ATGACCCCTCCTGAAGATGG 58.484 55.000 0.00 0.00 0.00 3.51
384 385 1.826024 CCCTCCTGAAGATGGGACG 59.174 63.158 0.00 0.00 42.11 4.79
385 386 1.690219 CCCTCCTGAAGATGGGACGG 61.690 65.000 0.00 0.00 42.11 4.79
386 387 1.144936 CTCCTGAAGATGGGACGGC 59.855 63.158 0.00 0.00 0.00 5.68
387 388 2.202932 CCTGAAGATGGGACGGCG 60.203 66.667 4.80 4.80 0.00 6.46
388 389 2.202932 CTGAAGATGGGACGGCGG 60.203 66.667 13.24 0.00 0.00 6.13
389 390 2.682136 TGAAGATGGGACGGCGGA 60.682 61.111 13.24 0.00 0.00 5.54
390 391 2.238847 CTGAAGATGGGACGGCGGAA 62.239 60.000 13.24 0.00 0.00 4.30
391 392 1.521681 GAAGATGGGACGGCGGAAG 60.522 63.158 13.24 0.00 0.00 3.46
392 393 1.956629 GAAGATGGGACGGCGGAAGA 61.957 60.000 13.24 0.00 0.00 2.87
393 394 1.338136 AAGATGGGACGGCGGAAGAT 61.338 55.000 13.24 0.00 0.00 2.40
394 395 1.595382 GATGGGACGGCGGAAGATG 60.595 63.158 13.24 0.00 0.00 2.90
395 396 2.996168 GATGGGACGGCGGAAGATGG 62.996 65.000 13.24 0.00 0.00 3.51
397 398 4.467084 GGACGGCGGAAGATGGCA 62.467 66.667 13.24 0.00 0.00 4.92
398 399 2.892425 GACGGCGGAAGATGGCAG 60.892 66.667 13.24 0.00 0.00 4.85
404 405 3.207669 GGAAGATGGCAGCGGCAG 61.208 66.667 11.88 0.00 42.43 4.85
405 406 2.124983 GAAGATGGCAGCGGCAGA 60.125 61.111 11.88 0.00 42.43 4.26
406 407 1.525535 GAAGATGGCAGCGGCAGAT 60.526 57.895 11.88 1.30 42.43 2.90
407 408 1.505477 GAAGATGGCAGCGGCAGATC 61.505 60.000 11.88 11.20 42.43 2.75
408 409 2.955022 AAGATGGCAGCGGCAGATCC 62.955 60.000 11.88 0.00 42.43 3.36
409 410 3.472943 GATGGCAGCGGCAGATCCT 62.473 63.158 11.88 0.00 42.43 3.24
410 411 2.104572 GATGGCAGCGGCAGATCCTA 62.105 60.000 11.88 0.00 42.43 2.94
411 412 2.280457 GGCAGCGGCAGATCCTAC 60.280 66.667 11.88 0.00 43.71 3.18
412 413 2.501128 GCAGCGGCAGATCCTACA 59.499 61.111 3.18 0.00 40.72 2.74
413 414 1.153369 GCAGCGGCAGATCCTACAA 60.153 57.895 3.18 0.00 40.72 2.41
414 415 1.432270 GCAGCGGCAGATCCTACAAC 61.432 60.000 3.18 0.00 40.72 3.32
415 416 1.141881 AGCGGCAGATCCTACAACG 59.858 57.895 1.45 0.00 0.00 4.10
416 417 1.153628 GCGGCAGATCCTACAACGT 60.154 57.895 0.00 0.00 0.00 3.99
417 418 1.421410 GCGGCAGATCCTACAACGTG 61.421 60.000 0.00 0.00 0.00 4.49
418 419 1.421410 CGGCAGATCCTACAACGTGC 61.421 60.000 0.00 0.00 0.00 5.34
419 420 1.421410 GGCAGATCCTACAACGTGCG 61.421 60.000 0.00 0.00 0.00 5.34
420 421 1.999051 CAGATCCTACAACGTGCGC 59.001 57.895 0.00 0.00 0.00 6.09
421 422 0.735978 CAGATCCTACAACGTGCGCA 60.736 55.000 5.66 5.66 0.00 6.09
422 423 0.175760 AGATCCTACAACGTGCGCAT 59.824 50.000 15.91 0.00 0.00 4.73
423 424 0.301687 GATCCTACAACGTGCGCATG 59.698 55.000 27.53 27.53 0.00 4.06
424 425 1.705337 ATCCTACAACGTGCGCATGC 61.705 55.000 28.93 7.91 43.20 4.06
442 443 3.404978 CAATGTGCATTGTGGGACG 57.595 52.632 14.75 0.00 42.32 4.79
443 444 0.733566 CAATGTGCATTGTGGGACGC 60.734 55.000 14.75 0.00 42.32 5.19
444 445 1.876497 AATGTGCATTGTGGGACGCC 61.876 55.000 0.00 0.00 38.60 5.68
445 446 2.672996 GTGCATTGTGGGACGCCT 60.673 61.111 0.00 0.00 38.60 5.52
446 447 1.376683 GTGCATTGTGGGACGCCTA 60.377 57.895 0.00 0.00 38.60 3.93
447 448 1.078497 TGCATTGTGGGACGCCTAG 60.078 57.895 0.00 0.00 38.60 3.02
448 449 1.220749 GCATTGTGGGACGCCTAGA 59.779 57.895 0.00 0.00 38.60 2.43
449 450 1.090052 GCATTGTGGGACGCCTAGAC 61.090 60.000 0.00 0.00 38.60 2.59
450 451 0.462047 CATTGTGGGACGCCTAGACC 60.462 60.000 0.00 0.00 38.60 3.85
451 452 1.956629 ATTGTGGGACGCCTAGACCG 61.957 60.000 0.00 0.00 38.60 4.79
452 453 3.834799 GTGGGACGCCTAGACCGG 61.835 72.222 0.00 0.00 35.46 5.28
453 454 4.371417 TGGGACGCCTAGACCGGT 62.371 66.667 6.92 6.92 35.46 5.28
454 455 3.073101 GGGACGCCTAGACCGGTT 61.073 66.667 9.42 0.87 35.46 4.44
455 456 2.183555 GGACGCCTAGACCGGTTG 59.816 66.667 9.42 1.93 0.00 3.77
456 457 2.183555 GACGCCTAGACCGGTTGG 59.816 66.667 9.42 13.22 42.84 3.77
466 467 2.266055 CCGGTTGGTCCTCTCTGC 59.734 66.667 0.00 0.00 0.00 4.26
467 468 2.286523 CCGGTTGGTCCTCTCTGCT 61.287 63.158 0.00 0.00 0.00 4.24
468 469 1.674057 CGGTTGGTCCTCTCTGCTT 59.326 57.895 0.00 0.00 0.00 3.91
469 470 0.671781 CGGTTGGTCCTCTCTGCTTG 60.672 60.000 0.00 0.00 0.00 4.01
470 471 0.398318 GGTTGGTCCTCTCTGCTTGT 59.602 55.000 0.00 0.00 0.00 3.16
471 472 1.609320 GGTTGGTCCTCTCTGCTTGTC 60.609 57.143 0.00 0.00 0.00 3.18
472 473 1.070758 GTTGGTCCTCTCTGCTTGTCA 59.929 52.381 0.00 0.00 0.00 3.58
473 474 0.972134 TGGTCCTCTCTGCTTGTCAG 59.028 55.000 0.00 0.00 44.21 3.51
474 475 0.248843 GGTCCTCTCTGCTTGTCAGG 59.751 60.000 0.00 0.00 43.06 3.86
475 476 0.390998 GTCCTCTCTGCTTGTCAGGC 60.391 60.000 0.00 0.00 43.06 4.85
476 477 1.447489 CCTCTCTGCTTGTCAGGCG 60.447 63.158 2.15 0.00 43.06 5.52
477 478 1.447489 CTCTCTGCTTGTCAGGCGG 60.447 63.158 9.45 9.45 43.06 6.13
478 479 1.881903 CTCTCTGCTTGTCAGGCGGA 61.882 60.000 16.81 16.81 43.06 5.54
490 491 3.719214 GGCGGACGGCTTATTGAG 58.281 61.111 11.19 0.00 42.94 3.02
491 492 1.887707 GGCGGACGGCTTATTGAGG 60.888 63.158 11.19 0.00 42.94 3.86
492 493 2.534903 GCGGACGGCTTATTGAGGC 61.535 63.158 0.00 0.00 46.92 4.70
499 500 2.071778 GGCTTATTGAGGCCATTGGA 57.928 50.000 5.01 0.00 46.84 3.53
500 501 2.601905 GGCTTATTGAGGCCATTGGAT 58.398 47.619 5.01 0.00 46.84 3.41
501 502 2.967887 GGCTTATTGAGGCCATTGGATT 59.032 45.455 5.01 0.00 46.84 3.01
502 503 4.151883 GGCTTATTGAGGCCATTGGATTA 58.848 43.478 5.01 0.00 46.84 1.75
503 504 4.219288 GGCTTATTGAGGCCATTGGATTAG 59.781 45.833 5.01 0.00 46.84 1.73
504 505 5.072741 GCTTATTGAGGCCATTGGATTAGA 58.927 41.667 5.01 0.00 0.00 2.10
505 506 5.536161 GCTTATTGAGGCCATTGGATTAGAA 59.464 40.000 5.01 0.00 0.00 2.10
506 507 6.210185 GCTTATTGAGGCCATTGGATTAGAAT 59.790 38.462 5.01 0.34 0.00 2.40
507 508 7.528996 TTATTGAGGCCATTGGATTAGAATG 57.471 36.000 5.01 0.00 0.00 2.67
514 515 5.762825 CCATTGGATTAGAATGGTGTCTG 57.237 43.478 0.00 0.00 43.40 3.51
515 516 4.037208 CCATTGGATTAGAATGGTGTCTGC 59.963 45.833 0.00 0.00 43.40 4.26
516 517 4.574674 TTGGATTAGAATGGTGTCTGCT 57.425 40.909 0.00 0.00 0.00 4.24
517 518 3.877559 TGGATTAGAATGGTGTCTGCTG 58.122 45.455 0.00 0.00 0.00 4.41
518 519 3.519107 TGGATTAGAATGGTGTCTGCTGA 59.481 43.478 0.00 0.00 0.00 4.26
519 520 4.164796 TGGATTAGAATGGTGTCTGCTGAT 59.835 41.667 0.00 0.00 0.00 2.90
520 521 4.514441 GGATTAGAATGGTGTCTGCTGATG 59.486 45.833 0.00 0.00 0.00 3.07
521 522 1.747709 AGAATGGTGTCTGCTGATGC 58.252 50.000 0.00 0.00 40.20 3.91
554 555 6.308015 TGGCACATCTTTATACTTGTAGGT 57.692 37.500 0.00 0.00 0.00 3.08
555 556 6.112734 TGGCACATCTTTATACTTGTAGGTG 58.887 40.000 0.00 0.00 0.00 4.00
556 557 6.113411 GGCACATCTTTATACTTGTAGGTGT 58.887 40.000 0.00 0.00 32.41 4.16
557 558 7.093245 TGGCACATCTTTATACTTGTAGGTGTA 60.093 37.037 0.00 0.00 31.13 2.90
558 559 7.438459 GGCACATCTTTATACTTGTAGGTGTAG 59.562 40.741 0.00 0.00 31.13 2.74
559 560 7.042658 GCACATCTTTATACTTGTAGGTGTAGC 60.043 40.741 0.00 0.00 31.13 3.58
560 561 7.979537 CACATCTTTATACTTGTAGGTGTAGCA 59.020 37.037 0.00 0.00 31.13 3.49
561 562 8.537016 ACATCTTTATACTTGTAGGTGTAGCAA 58.463 33.333 0.00 0.00 30.55 3.91
562 563 8.818057 CATCTTTATACTTGTAGGTGTAGCAAC 58.182 37.037 0.00 0.00 0.00 4.17
563 564 8.130671 TCTTTATACTTGTAGGTGTAGCAACT 57.869 34.615 0.00 0.00 34.83 3.16
564 565 8.591072 TCTTTATACTTGTAGGTGTAGCAACTT 58.409 33.333 0.00 0.00 31.86 2.66
565 566 9.216117 CTTTATACTTGTAGGTGTAGCAACTTT 57.784 33.333 0.00 0.00 31.86 2.66
569 570 7.668525 ACTTGTAGGTGTAGCAACTTTATTC 57.331 36.000 0.00 0.00 31.86 1.75
570 571 6.367969 ACTTGTAGGTGTAGCAACTTTATTCG 59.632 38.462 0.00 0.00 31.86 3.34
571 572 5.786311 TGTAGGTGTAGCAACTTTATTCGT 58.214 37.500 0.00 0.00 31.86 3.85
572 573 5.865552 TGTAGGTGTAGCAACTTTATTCGTC 59.134 40.000 0.00 0.00 31.86 4.20
573 574 5.148651 AGGTGTAGCAACTTTATTCGTCT 57.851 39.130 0.00 0.00 0.00 4.18
574 575 5.169295 AGGTGTAGCAACTTTATTCGTCTC 58.831 41.667 0.00 0.00 0.00 3.36
575 576 4.031426 GGTGTAGCAACTTTATTCGTCTCG 59.969 45.833 0.00 0.00 0.00 4.04
576 577 4.855388 GTGTAGCAACTTTATTCGTCTCGA 59.145 41.667 0.00 0.00 0.00 4.04
586 587 2.417339 TTCGTCTCGAAGTTGTCAGG 57.583 50.000 0.40 0.00 41.05 3.86
587 588 0.039437 TCGTCTCGAAGTTGTCAGGC 60.039 55.000 0.00 0.00 31.06 4.85
588 589 0.039074 CGTCTCGAAGTTGTCAGGCT 60.039 55.000 0.00 0.00 0.00 4.58
589 590 1.704070 GTCTCGAAGTTGTCAGGCTC 58.296 55.000 0.00 0.00 0.00 4.70
590 591 1.271102 GTCTCGAAGTTGTCAGGCTCT 59.729 52.381 0.00 0.00 0.00 4.09
591 592 2.488545 GTCTCGAAGTTGTCAGGCTCTA 59.511 50.000 0.00 0.00 0.00 2.43
592 593 3.057456 GTCTCGAAGTTGTCAGGCTCTAA 60.057 47.826 0.00 0.00 0.00 2.10
593 594 3.764434 TCTCGAAGTTGTCAGGCTCTAAT 59.236 43.478 0.00 0.00 0.00 1.73
594 595 4.948004 TCTCGAAGTTGTCAGGCTCTAATA 59.052 41.667 0.00 0.00 0.00 0.98
595 596 5.417894 TCTCGAAGTTGTCAGGCTCTAATAA 59.582 40.000 0.00 0.00 0.00 1.40
596 597 6.032956 TCGAAGTTGTCAGGCTCTAATAAA 57.967 37.500 0.00 0.00 0.00 1.40
597 598 6.640518 TCGAAGTTGTCAGGCTCTAATAAAT 58.359 36.000 0.00 0.00 0.00 1.40
598 599 7.778083 TCGAAGTTGTCAGGCTCTAATAAATA 58.222 34.615 0.00 0.00 0.00 1.40
599 600 8.255206 TCGAAGTTGTCAGGCTCTAATAAATAA 58.745 33.333 0.00 0.00 0.00 1.40
600 601 8.879759 CGAAGTTGTCAGGCTCTAATAAATAAA 58.120 33.333 0.00 0.00 0.00 1.40
625 626 9.602568 AATTAATAAAAATGACTGCATGCATCA 57.397 25.926 22.97 24.26 34.26 3.07
626 627 8.637281 TTAATAAAAATGACTGCATGCATCAG 57.363 30.769 22.97 12.59 34.26 2.90
627 628 4.530710 AAAAATGACTGCATGCATCAGT 57.469 36.364 22.97 23.25 46.46 3.41
628 629 4.530710 AAAATGACTGCATGCATCAGTT 57.469 36.364 25.85 25.85 44.09 3.16
629 630 4.530710 AAATGACTGCATGCATCAGTTT 57.469 36.364 25.85 22.35 44.09 2.66
630 631 3.503827 ATGACTGCATGCATCAGTTTG 57.496 42.857 22.97 10.18 44.09 2.93
631 632 2.506444 TGACTGCATGCATCAGTTTGA 58.494 42.857 22.97 13.49 44.09 2.69
632 633 3.086282 TGACTGCATGCATCAGTTTGAT 58.914 40.909 22.97 8.65 44.09 2.57
633 634 5.907213 AATGACTGCATGCATCAGTTTGATG 60.907 40.000 22.97 13.34 44.27 3.07
641 642 1.404391 CATCAGTTTGATGCAGAGGGC 59.596 52.381 6.16 0.00 46.37 5.19
642 643 4.138179 CATCAGTTTGATGCAGAGGGCG 62.138 54.545 6.16 0.00 46.37 6.13
650 651 2.111251 GCAGAGGGCGGGGTAATC 59.889 66.667 0.00 0.00 0.00 1.75
651 652 2.444256 GCAGAGGGCGGGGTAATCT 61.444 63.158 0.00 0.00 0.00 2.40
652 653 1.984288 GCAGAGGGCGGGGTAATCTT 61.984 60.000 0.00 0.00 0.00 2.40
653 654 0.546598 CAGAGGGCGGGGTAATCTTT 59.453 55.000 0.00 0.00 0.00 2.52
654 655 0.837940 AGAGGGCGGGGTAATCTTTC 59.162 55.000 0.00 0.00 0.00 2.62
655 656 0.837940 GAGGGCGGGGTAATCTTTCT 59.162 55.000 0.00 0.00 0.00 2.52
656 657 1.212195 GAGGGCGGGGTAATCTTTCTT 59.788 52.381 0.00 0.00 0.00 2.52
657 658 1.639108 AGGGCGGGGTAATCTTTCTTT 59.361 47.619 0.00 0.00 0.00 2.52
658 659 2.042569 AGGGCGGGGTAATCTTTCTTTT 59.957 45.455 0.00 0.00 0.00 2.27
659 660 3.267551 AGGGCGGGGTAATCTTTCTTTTA 59.732 43.478 0.00 0.00 0.00 1.52
660 661 4.079385 AGGGCGGGGTAATCTTTCTTTTAT 60.079 41.667 0.00 0.00 0.00 1.40
661 662 5.133153 AGGGCGGGGTAATCTTTCTTTTATA 59.867 40.000 0.00 0.00 0.00 0.98
662 663 5.829391 GGGCGGGGTAATCTTTCTTTTATAA 59.171 40.000 0.00 0.00 0.00 0.98
663 664 6.321945 GGGCGGGGTAATCTTTCTTTTATAAA 59.678 38.462 0.00 0.00 0.00 1.40
664 665 7.147863 GGGCGGGGTAATCTTTCTTTTATAAAA 60.148 37.037 10.16 10.16 0.00 1.52
665 666 8.252417 GGCGGGGTAATCTTTCTTTTATAAAAA 58.748 33.333 11.62 0.00 0.00 1.94
682 683 2.961522 AAAATCCGTGTAAGTGCGTG 57.038 45.000 0.00 0.00 0.00 5.34
683 684 1.153353 AAATCCGTGTAAGTGCGTGG 58.847 50.000 0.00 0.00 0.00 4.94
684 685 1.296056 AATCCGTGTAAGTGCGTGGC 61.296 55.000 0.00 0.00 0.00 5.01
685 686 2.443260 ATCCGTGTAAGTGCGTGGCA 62.443 55.000 0.00 0.00 35.60 4.92
686 687 2.032634 CCGTGTAAGTGCGTGGCAT 61.033 57.895 0.00 0.00 41.91 4.40
687 688 1.573829 CCGTGTAAGTGCGTGGCATT 61.574 55.000 0.00 0.00 41.91 3.56
688 689 0.179225 CGTGTAAGTGCGTGGCATTC 60.179 55.000 0.00 0.00 41.91 2.67
689 690 0.179225 GTGTAAGTGCGTGGCATTCG 60.179 55.000 0.00 0.00 41.91 3.34
690 691 0.601576 TGTAAGTGCGTGGCATTCGT 60.602 50.000 0.00 0.00 41.91 3.85
691 692 0.515564 GTAAGTGCGTGGCATTCGTT 59.484 50.000 0.00 0.00 41.91 3.85
692 693 0.793861 TAAGTGCGTGGCATTCGTTC 59.206 50.000 0.00 0.00 41.91 3.95
693 694 1.163420 AAGTGCGTGGCATTCGTTCA 61.163 50.000 0.00 0.00 41.91 3.18
694 695 1.163420 AGTGCGTGGCATTCGTTCAA 61.163 50.000 0.00 0.00 41.91 2.69
731 732 0.172578 TAGCATTGGTCGTGGTCGAG 59.827 55.000 0.00 0.00 46.96 4.04
787 788 2.793278 TCGCTAGATAAGATTGCGCA 57.207 45.000 5.66 5.66 45.24 6.09
806 807 2.793933 GCACGAAGACTACCGGACATAC 60.794 54.545 9.46 0.00 0.00 2.39
811 812 4.421948 GAAGACTACCGGACATACAGTTG 58.578 47.826 9.46 0.00 0.00 3.16
900 911 7.711772 TCCTTCGACTCAGTAGATTAGTTAGAG 59.288 40.741 0.00 0.00 0.00 2.43
922 933 3.677601 CGAGATCGCGTTCTAGTAACAA 58.322 45.455 19.09 0.00 0.00 2.83
925 936 4.801891 AGATCGCGTTCTAGTAACAAACA 58.198 39.130 17.76 0.00 0.00 2.83
976 990 2.701551 ACCTGCTGTATATAAGGGCCA 58.298 47.619 6.18 0.00 33.87 5.36
1038 1058 3.797039 TCCAATCTAATCGCTGGTTCTG 58.203 45.455 0.00 0.00 0.00 3.02
1040 1060 3.201290 CAATCTAATCGCTGGTTCTGCT 58.799 45.455 0.00 0.00 0.00 4.24
1041 1061 3.550437 ATCTAATCGCTGGTTCTGCTT 57.450 42.857 0.00 0.00 0.00 3.91
1043 1063 2.497675 TCTAATCGCTGGTTCTGCTTCT 59.502 45.455 0.00 0.00 0.00 2.85
1044 1064 1.731720 AATCGCTGGTTCTGCTTCTC 58.268 50.000 0.00 0.00 0.00 2.87
1046 1066 2.097038 CGCTGGTTCTGCTTCTCCG 61.097 63.158 0.00 0.00 0.00 4.63
1047 1067 1.004440 GCTGGTTCTGCTTCTCCGT 60.004 57.895 0.00 0.00 0.00 4.69
1048 1068 0.246635 GCTGGTTCTGCTTCTCCGTA 59.753 55.000 0.00 0.00 0.00 4.02
1049 1069 1.997669 CTGGTTCTGCTTCTCCGTAC 58.002 55.000 0.00 0.00 0.00 3.67
1050 1070 1.272490 CTGGTTCTGCTTCTCCGTACA 59.728 52.381 0.00 0.00 0.00 2.90
1051 1071 1.689813 TGGTTCTGCTTCTCCGTACAA 59.310 47.619 0.00 0.00 0.00 2.41
1052 1072 2.067013 GGTTCTGCTTCTCCGTACAAC 58.933 52.381 0.00 0.00 0.00 3.32
1053 1073 2.067013 GTTCTGCTTCTCCGTACAACC 58.933 52.381 0.00 0.00 0.00 3.77
1304 1324 2.671070 CCCAAGATCACCGCCACT 59.329 61.111 0.00 0.00 0.00 4.00
1337 1363 2.368875 GTCAGACAAGAGGGACCTTGAA 59.631 50.000 10.21 0.00 44.66 2.69
1367 1393 1.137872 CTCCTCTACGCCAAGCTCATT 59.862 52.381 0.00 0.00 0.00 2.57
1537 1563 1.328986 GCTGGAGCTTAATCAGTTCGC 59.671 52.381 0.00 0.00 33.51 4.70
2024 2051 2.033757 CAGCTCAGCAAGGCCACT 59.966 61.111 5.01 0.00 0.00 4.00
2046 2077 1.810755 TGCAGTACGAGACACAGGTAG 59.189 52.381 0.00 0.00 0.00 3.18
2047 2078 1.811359 GCAGTACGAGACACAGGTAGT 59.189 52.381 0.00 0.00 0.00 2.73
2078 2162 3.976169 TGCATGTGCTTAAACCTTTGAC 58.024 40.909 6.55 0.00 42.66 3.18
2084 2168 4.033019 GTGCTTAAACCTTTGACACGTTC 58.967 43.478 0.00 0.00 0.00 3.95
2115 2254 4.937696 CATGCATGCATGTGTCAATTTT 57.062 36.364 40.30 13.68 46.20 1.82
2685 2843 2.717809 GAGTGCGCGTTCCTCGTTC 61.718 63.158 8.43 0.00 42.13 3.95
2686 2844 2.733593 GTGCGCGTTCCTCGTTCT 60.734 61.111 8.43 0.00 42.13 3.01
2716 2914 3.654414 CCAAGACTCGTCAGCTTAAGTT 58.346 45.455 4.02 0.00 0.00 2.66
2718 2916 5.227908 CCAAGACTCGTCAGCTTAAGTTTA 58.772 41.667 4.02 0.00 0.00 2.01
2721 2919 7.284351 CAAGACTCGTCAGCTTAAGTTTAAAG 58.716 38.462 4.02 0.00 0.00 1.85
2722 2920 6.746120 AGACTCGTCAGCTTAAGTTTAAAGA 58.254 36.000 4.02 0.00 0.00 2.52
2724 2922 7.169476 AGACTCGTCAGCTTAAGTTTAAAGAAC 59.831 37.037 4.02 0.00 0.00 3.01
2726 2924 8.139989 ACTCGTCAGCTTAAGTTTAAAGAACTA 58.860 33.333 4.02 0.00 0.00 2.24
2727 2925 9.141400 CTCGTCAGCTTAAGTTTAAAGAACTAT 57.859 33.333 4.02 0.00 0.00 2.12
2728 2926 8.922676 TCGTCAGCTTAAGTTTAAAGAACTATG 58.077 33.333 4.02 0.00 0.00 2.23
2729 2927 8.922676 CGTCAGCTTAAGTTTAAAGAACTATGA 58.077 33.333 4.02 0.00 0.00 2.15
2744 2942 9.927081 AAAGAACTATGAATATCCCAGATGTTT 57.073 29.630 0.00 0.00 0.00 2.83
2746 2944 9.927081 AGAACTATGAATATCCCAGATGTTTTT 57.073 29.630 0.00 0.00 0.00 1.94
2831 3031 5.654603 TGTCCACTATCAGTCGTGTTATT 57.345 39.130 0.00 0.00 0.00 1.40
2900 3159 9.893305 ACCTTTGATATTACAAGAAACTTTTCG 57.107 29.630 0.00 0.00 41.92 3.46
2901 3160 8.850452 CCTTTGATATTACAAGAAACTTTTCGC 58.150 33.333 0.00 0.00 41.92 4.70
2902 3161 9.393249 CTTTGATATTACAAGAAACTTTTCGCA 57.607 29.630 0.00 0.00 41.92 5.10
3187 4336 4.753662 ACCTCGTCGGGCCTGCTA 62.754 66.667 6.73 0.00 36.97 3.49
3336 4926 4.778143 GGGTTCCAGCGTCGCCAT 62.778 66.667 14.86 0.00 0.00 4.40
3349 4939 4.783621 GCCATCGGCCTGCTGTCA 62.784 66.667 0.00 0.00 44.06 3.58
3465 5055 3.197983 AGAAGCGGGTTGTAGCTATTCTT 59.802 43.478 0.00 0.00 43.78 2.52
3630 5268 3.435671 CGTCCGTCAAAGCCTATTCTTTT 59.564 43.478 0.00 0.00 34.31 2.27
3666 5304 3.659089 ATGCCACCGGTCGTAGCAC 62.659 63.158 17.53 0.00 36.06 4.40
3668 5306 3.379445 CCACCGGTCGTAGCACCT 61.379 66.667 2.59 0.00 33.77 4.00
3669 5307 2.048023 CCACCGGTCGTAGCACCTA 61.048 63.158 2.59 0.00 33.77 3.08
3670 5308 1.389609 CCACCGGTCGTAGCACCTAT 61.390 60.000 2.59 0.00 33.77 2.57
3671 5309 0.248907 CACCGGTCGTAGCACCTATG 60.249 60.000 2.59 0.00 33.77 2.23
3672 5310 0.682209 ACCGGTCGTAGCACCTATGT 60.682 55.000 0.00 0.00 33.77 2.29
3673 5311 0.248907 CCGGTCGTAGCACCTATGTG 60.249 60.000 0.00 0.00 45.65 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.618680 CATGGAGGAGGTGACTGGGA 60.619 60.000 0.00 0.00 44.43 4.37
3 4 0.177604 GCTCATGGAGGAGGTGACTG 59.822 60.000 0.00 0.00 44.43 3.51
5 6 1.142748 CGCTCATGGAGGAGGTGAC 59.857 63.158 0.00 0.00 35.41 3.67
8 9 2.685017 TGCGCTCATGGAGGAGGT 60.685 61.111 9.73 0.00 35.41 3.85
9 10 2.108566 CTGCGCTCATGGAGGAGG 59.891 66.667 9.73 0.00 35.41 4.30
13 14 4.519437 TCGCCTGCGCTCATGGAG 62.519 66.667 9.73 7.79 39.59 3.86
14 15 4.819761 GTCGCCTGCGCTCATGGA 62.820 66.667 9.73 0.00 39.59 3.41
16 17 3.561213 CTGTCGCCTGCGCTCATG 61.561 66.667 9.73 0.00 39.59 3.07
27 28 3.363844 GAGGACCAGAGGCTGTCGC 62.364 68.421 0.00 0.00 0.00 5.19
28 29 1.680651 AGAGGACCAGAGGCTGTCG 60.681 63.158 0.00 0.00 0.00 4.35
29 30 1.896694 CAGAGGACCAGAGGCTGTC 59.103 63.158 0.00 0.00 0.00 3.51
30 31 2.289532 GCAGAGGACCAGAGGCTGT 61.290 63.158 0.00 0.00 0.00 4.40
31 32 1.551908 AAGCAGAGGACCAGAGGCTG 61.552 60.000 0.00 0.00 0.00 4.85
32 33 0.839853 AAAGCAGAGGACCAGAGGCT 60.840 55.000 0.00 0.00 0.00 4.58
33 34 0.676151 CAAAGCAGAGGACCAGAGGC 60.676 60.000 0.00 0.00 0.00 4.70
34 35 0.035630 CCAAAGCAGAGGACCAGAGG 60.036 60.000 0.00 0.00 0.00 3.69
35 36 0.035630 CCCAAAGCAGAGGACCAGAG 60.036 60.000 0.00 0.00 0.00 3.35
36 37 0.473694 TCCCAAAGCAGAGGACCAGA 60.474 55.000 0.00 0.00 0.00 3.86
37 38 0.035630 CTCCCAAAGCAGAGGACCAG 60.036 60.000 0.00 0.00 0.00 4.00
38 39 0.473694 TCTCCCAAAGCAGAGGACCA 60.474 55.000 0.00 0.00 0.00 4.02
39 40 0.035915 GTCTCCCAAAGCAGAGGACC 60.036 60.000 0.00 0.00 0.00 4.46
40 41 0.390472 CGTCTCCCAAAGCAGAGGAC 60.390 60.000 0.00 0.00 0.00 3.85
41 42 0.541998 TCGTCTCCCAAAGCAGAGGA 60.542 55.000 0.00 0.00 32.45 3.71
42 43 0.390472 GTCGTCTCCCAAAGCAGAGG 60.390 60.000 0.00 0.00 0.00 3.69
43 44 0.734253 CGTCGTCTCCCAAAGCAGAG 60.734 60.000 0.00 0.00 0.00 3.35
44 45 1.176619 TCGTCGTCTCCCAAAGCAGA 61.177 55.000 0.00 0.00 0.00 4.26
45 46 1.009389 GTCGTCGTCTCCCAAAGCAG 61.009 60.000 0.00 0.00 0.00 4.24
46 47 1.006571 GTCGTCGTCTCCCAAAGCA 60.007 57.895 0.00 0.00 0.00 3.91
47 48 1.006571 TGTCGTCGTCTCCCAAAGC 60.007 57.895 0.00 0.00 0.00 3.51
48 49 1.002250 CGTGTCGTCGTCTCCCAAAG 61.002 60.000 0.00 0.00 0.00 2.77
49 50 1.008194 CGTGTCGTCGTCTCCCAAA 60.008 57.895 0.00 0.00 0.00 3.28
50 51 2.188829 ACGTGTCGTCGTCTCCCAA 61.189 57.895 0.00 0.00 40.04 4.12
51 52 2.592574 ACGTGTCGTCGTCTCCCA 60.593 61.111 0.00 0.00 40.04 4.37
52 53 2.126965 CACGTGTCGTCGTCTCCC 60.127 66.667 7.58 0.00 42.27 4.30
53 54 1.724929 CACACGTGTCGTCGTCTCC 60.725 63.158 20.49 0.00 42.27 3.71
54 55 1.724929 CCACACGTGTCGTCGTCTC 60.725 63.158 20.49 0.00 42.27 3.36
55 56 2.330393 CCACACGTGTCGTCGTCT 59.670 61.111 20.49 0.00 42.27 4.18
56 57 3.392440 GCCACACGTGTCGTCGTC 61.392 66.667 20.49 0.00 42.27 4.20
67 68 0.307760 CAAGAAGGAACACGCCACAC 59.692 55.000 0.00 0.00 0.00 3.82
68 69 0.179234 TCAAGAAGGAACACGCCACA 59.821 50.000 0.00 0.00 0.00 4.17
69 70 1.264288 CTTCAAGAAGGAACACGCCAC 59.736 52.381 1.86 0.00 34.87 5.01
70 71 1.593196 CTTCAAGAAGGAACACGCCA 58.407 50.000 1.86 0.00 34.87 5.69
80 81 3.169198 GCCGACGCCTTCAAGAAG 58.831 61.111 2.83 2.83 38.14 2.85
95 96 4.864334 CATGAGCAGTCCCCGGCC 62.864 72.222 0.00 0.00 31.47 6.13
96 97 3.112205 ATCATGAGCAGTCCCCGGC 62.112 63.158 0.09 0.00 0.00 6.13
97 98 1.227764 CATCATGAGCAGTCCCCGG 60.228 63.158 0.09 0.00 0.00 5.73
98 99 1.227764 CCATCATGAGCAGTCCCCG 60.228 63.158 0.09 0.00 0.00 5.73
99 100 0.465097 CACCATCATGAGCAGTCCCC 60.465 60.000 0.09 0.00 0.00 4.81
100 101 0.465097 CCACCATCATGAGCAGTCCC 60.465 60.000 0.09 0.00 0.00 4.46
101 102 0.543277 TCCACCATCATGAGCAGTCC 59.457 55.000 0.09 0.00 0.00 3.85
102 103 1.209019 ACTCCACCATCATGAGCAGTC 59.791 52.381 0.09 0.00 0.00 3.51
103 104 1.283347 ACTCCACCATCATGAGCAGT 58.717 50.000 0.09 0.00 0.00 4.40
104 105 2.014857 CAACTCCACCATCATGAGCAG 58.985 52.381 0.09 0.00 0.00 4.24
105 106 1.951895 GCAACTCCACCATCATGAGCA 60.952 52.381 0.09 0.00 0.00 4.26
106 107 0.737219 GCAACTCCACCATCATGAGC 59.263 55.000 0.09 0.00 0.00 4.26
107 108 2.014857 CAGCAACTCCACCATCATGAG 58.985 52.381 0.09 0.00 0.00 2.90
108 109 1.340308 CCAGCAACTCCACCATCATGA 60.340 52.381 0.00 0.00 0.00 3.07
109 110 1.100510 CCAGCAACTCCACCATCATG 58.899 55.000 0.00 0.00 0.00 3.07
110 111 0.700564 ACCAGCAACTCCACCATCAT 59.299 50.000 0.00 0.00 0.00 2.45
111 112 0.250858 CACCAGCAACTCCACCATCA 60.251 55.000 0.00 0.00 0.00 3.07
112 113 0.962356 CCACCAGCAACTCCACCATC 60.962 60.000 0.00 0.00 0.00 3.51
113 114 1.075482 CCACCAGCAACTCCACCAT 59.925 57.895 0.00 0.00 0.00 3.55
114 115 1.932156 AACCACCAGCAACTCCACCA 61.932 55.000 0.00 0.00 0.00 4.17
115 116 0.755327 AAACCACCAGCAACTCCACC 60.755 55.000 0.00 0.00 0.00 4.61
116 117 0.385390 CAAACCACCAGCAACTCCAC 59.615 55.000 0.00 0.00 0.00 4.02
117 118 0.754957 CCAAACCACCAGCAACTCCA 60.755 55.000 0.00 0.00 0.00 3.86
118 119 0.467290 TCCAAACCACCAGCAACTCC 60.467 55.000 0.00 0.00 0.00 3.85
119 120 0.954452 CTCCAAACCACCAGCAACTC 59.046 55.000 0.00 0.00 0.00 3.01
120 121 0.258774 ACTCCAAACCACCAGCAACT 59.741 50.000 0.00 0.00 0.00 3.16
121 122 0.668535 GACTCCAAACCACCAGCAAC 59.331 55.000 0.00 0.00 0.00 4.17
122 123 0.817634 CGACTCCAAACCACCAGCAA 60.818 55.000 0.00 0.00 0.00 3.91
123 124 1.227823 CGACTCCAAACCACCAGCA 60.228 57.895 0.00 0.00 0.00 4.41
124 125 1.966451 CCGACTCCAAACCACCAGC 60.966 63.158 0.00 0.00 0.00 4.85
125 126 1.966451 GCCGACTCCAAACCACCAG 60.966 63.158 0.00 0.00 0.00 4.00
126 127 2.112297 GCCGACTCCAAACCACCA 59.888 61.111 0.00 0.00 0.00 4.17
127 128 3.047877 CGCCGACTCCAAACCACC 61.048 66.667 0.00 0.00 0.00 4.61
128 129 2.027625 CTCGCCGACTCCAAACCAC 61.028 63.158 0.00 0.00 0.00 4.16
129 130 2.154798 CTCTCGCCGACTCCAAACCA 62.155 60.000 0.00 0.00 0.00 3.67
130 131 1.446272 CTCTCGCCGACTCCAAACC 60.446 63.158 0.00 0.00 0.00 3.27
131 132 0.173708 ATCTCTCGCCGACTCCAAAC 59.826 55.000 0.00 0.00 0.00 2.93
132 133 0.173481 CATCTCTCGCCGACTCCAAA 59.827 55.000 0.00 0.00 0.00 3.28
133 134 1.667154 CCATCTCTCGCCGACTCCAA 61.667 60.000 0.00 0.00 0.00 3.53
134 135 2.121538 CCATCTCTCGCCGACTCCA 61.122 63.158 0.00 0.00 0.00 3.86
135 136 2.065906 GACCATCTCTCGCCGACTCC 62.066 65.000 0.00 0.00 0.00 3.85
136 137 1.098712 AGACCATCTCTCGCCGACTC 61.099 60.000 0.00 0.00 0.00 3.36
137 138 1.077357 AGACCATCTCTCGCCGACT 60.077 57.895 0.00 0.00 0.00 4.18
138 139 1.064946 CAGACCATCTCTCGCCGAC 59.935 63.158 0.00 0.00 0.00 4.79
139 140 0.107361 TACAGACCATCTCTCGCCGA 60.107 55.000 0.00 0.00 0.00 5.54
140 141 0.309302 CTACAGACCATCTCTCGCCG 59.691 60.000 0.00 0.00 0.00 6.46
141 142 0.671251 CCTACAGACCATCTCTCGCC 59.329 60.000 0.00 0.00 0.00 5.54
142 143 1.066303 CACCTACAGACCATCTCTCGC 59.934 57.143 0.00 0.00 0.00 5.03
143 144 1.678627 CCACCTACAGACCATCTCTCG 59.321 57.143 0.00 0.00 0.00 4.04
144 145 2.955660 CTCCACCTACAGACCATCTCTC 59.044 54.545 0.00 0.00 0.00 3.20
145 146 2.313342 ACTCCACCTACAGACCATCTCT 59.687 50.000 0.00 0.00 0.00 3.10
146 147 2.428890 CACTCCACCTACAGACCATCTC 59.571 54.545 0.00 0.00 0.00 2.75
147 148 2.461695 CACTCCACCTACAGACCATCT 58.538 52.381 0.00 0.00 0.00 2.90
148 149 1.482593 CCACTCCACCTACAGACCATC 59.517 57.143 0.00 0.00 0.00 3.51
149 150 1.573108 CCACTCCACCTACAGACCAT 58.427 55.000 0.00 0.00 0.00 3.55
150 151 1.192146 GCCACTCCACCTACAGACCA 61.192 60.000 0.00 0.00 0.00 4.02
151 152 1.597461 GCCACTCCACCTACAGACC 59.403 63.158 0.00 0.00 0.00 3.85
152 153 0.905337 AGGCCACTCCACCTACAGAC 60.905 60.000 5.01 0.00 37.29 3.51
153 154 0.904865 CAGGCCACTCCACCTACAGA 60.905 60.000 5.01 0.00 37.29 3.41
154 155 0.904865 TCAGGCCACTCCACCTACAG 60.905 60.000 5.01 0.00 37.29 2.74
155 156 1.157513 TCAGGCCACTCCACCTACA 59.842 57.895 5.01 0.00 37.29 2.74
156 157 1.192146 TGTCAGGCCACTCCACCTAC 61.192 60.000 5.01 0.00 37.29 3.18
157 158 0.252696 ATGTCAGGCCACTCCACCTA 60.253 55.000 5.01 0.00 37.29 3.08
158 159 1.539869 ATGTCAGGCCACTCCACCT 60.540 57.895 5.01 0.00 37.29 4.00
159 160 1.078143 GATGTCAGGCCACTCCACC 60.078 63.158 5.01 0.00 37.29 4.61
160 161 1.134670 GTAGATGTCAGGCCACTCCAC 60.135 57.143 5.01 0.00 37.29 4.02
161 162 1.195115 GTAGATGTCAGGCCACTCCA 58.805 55.000 5.01 0.00 37.29 3.86
162 163 0.466124 GGTAGATGTCAGGCCACTCC 59.534 60.000 5.01 0.00 0.00 3.85
163 164 0.103208 CGGTAGATGTCAGGCCACTC 59.897 60.000 5.01 0.00 0.00 3.51
164 165 1.961180 GCGGTAGATGTCAGGCCACT 61.961 60.000 5.01 0.00 0.00 4.00
165 166 1.521681 GCGGTAGATGTCAGGCCAC 60.522 63.158 5.01 0.00 0.00 5.01
166 167 2.900273 GCGGTAGATGTCAGGCCA 59.100 61.111 5.01 0.00 0.00 5.36
167 168 2.279517 CGCGGTAGATGTCAGGCC 60.280 66.667 0.00 0.00 0.00 5.19
168 169 1.153628 AACGCGGTAGATGTCAGGC 60.154 57.895 12.47 0.00 0.00 4.85
169 170 0.172578 TCAACGCGGTAGATGTCAGG 59.827 55.000 12.47 0.00 0.00 3.86
170 171 1.269166 GTCAACGCGGTAGATGTCAG 58.731 55.000 12.47 0.00 0.00 3.51
171 172 0.455464 CGTCAACGCGGTAGATGTCA 60.455 55.000 12.47 0.00 0.00 3.58
172 173 0.179181 TCGTCAACGCGGTAGATGTC 60.179 55.000 12.47 0.00 39.60 3.06
173 174 0.455633 GTCGTCAACGCGGTAGATGT 60.456 55.000 12.47 0.00 39.60 3.06
174 175 1.461317 CGTCGTCAACGCGGTAGATG 61.461 60.000 12.47 10.18 45.76 2.90
175 176 1.226211 CGTCGTCAACGCGGTAGAT 60.226 57.895 12.47 0.00 45.76 1.98
176 177 2.174107 CGTCGTCAACGCGGTAGA 59.826 61.111 12.47 0.71 45.76 2.59
184 185 1.068585 AAGACCCACCGTCGTCAAC 59.931 57.895 0.00 0.00 46.92 3.18
185 186 1.068417 CAAGACCCACCGTCGTCAA 59.932 57.895 0.00 0.00 46.92 3.18
186 187 2.732016 CAAGACCCACCGTCGTCA 59.268 61.111 0.00 0.00 46.92 4.35
187 188 2.048503 CCAAGACCCACCGTCGTC 60.049 66.667 0.00 0.00 46.92 4.20
188 189 2.841044 ACCAAGACCCACCGTCGT 60.841 61.111 0.00 0.00 46.92 4.34
189 190 2.357034 CACCAAGACCCACCGTCG 60.357 66.667 0.00 0.00 46.92 5.12
190 191 2.032071 CCACCAAGACCCACCGTC 59.968 66.667 0.00 0.00 42.32 4.79
191 192 4.265056 GCCACCAAGACCCACCGT 62.265 66.667 0.00 0.00 0.00 4.83
192 193 3.567579 ATGCCACCAAGACCCACCG 62.568 63.158 0.00 0.00 0.00 4.94
193 194 1.978617 CATGCCACCAAGACCCACC 60.979 63.158 0.00 0.00 0.00 4.61
194 195 1.978617 CCATGCCACCAAGACCCAC 60.979 63.158 0.00 0.00 0.00 4.61
195 196 2.440147 CCATGCCACCAAGACCCA 59.560 61.111 0.00 0.00 0.00 4.51
196 197 1.978617 CACCATGCCACCAAGACCC 60.979 63.158 0.00 0.00 0.00 4.46
197 198 2.639327 GCACCATGCCACCAAGACC 61.639 63.158 0.00 0.00 37.42 3.85
198 199 1.870055 CTGCACCATGCCACCAAGAC 61.870 60.000 0.00 0.00 44.23 3.01
199 200 1.604308 CTGCACCATGCCACCAAGA 60.604 57.895 0.00 0.00 44.23 3.02
200 201 0.968901 ATCTGCACCATGCCACCAAG 60.969 55.000 0.00 0.00 44.23 3.61
201 202 1.077086 ATCTGCACCATGCCACCAA 59.923 52.632 0.00 0.00 44.23 3.67
202 203 1.679641 CATCTGCACCATGCCACCA 60.680 57.895 0.00 0.00 44.23 4.17
203 204 1.378911 TCATCTGCACCATGCCACC 60.379 57.895 0.00 0.00 44.23 4.61
204 205 0.679002 ACTCATCTGCACCATGCCAC 60.679 55.000 0.00 0.00 44.23 5.01
205 206 0.393402 GACTCATCTGCACCATGCCA 60.393 55.000 0.00 0.00 44.23 4.92
206 207 0.107312 AGACTCATCTGCACCATGCC 60.107 55.000 0.00 0.00 44.23 4.40
207 208 1.134461 AGAGACTCATCTGCACCATGC 60.134 52.381 5.02 0.00 45.29 4.06
208 209 2.167900 TGAGAGACTCATCTGCACCATG 59.832 50.000 5.02 0.00 35.39 3.66
209 210 2.431419 CTGAGAGACTCATCTGCACCAT 59.569 50.000 5.02 0.00 39.92 3.55
210 211 1.823610 CTGAGAGACTCATCTGCACCA 59.176 52.381 5.02 0.00 39.92 4.17
211 212 1.471327 GCTGAGAGACTCATCTGCACC 60.471 57.143 19.34 1.94 39.92 5.01
212 213 1.798446 CGCTGAGAGACTCATCTGCAC 60.798 57.143 21.71 2.54 39.92 4.57
213 214 0.455005 CGCTGAGAGACTCATCTGCA 59.545 55.000 21.71 0.00 39.92 4.41
214 215 0.248990 CCGCTGAGAGACTCATCTGC 60.249 60.000 5.02 12.71 39.92 4.26
215 216 0.248990 GCCGCTGAGAGACTCATCTG 60.249 60.000 5.02 5.12 39.92 2.90
216 217 1.723608 CGCCGCTGAGAGACTCATCT 61.724 60.000 5.02 0.00 39.92 2.90
217 218 1.299014 CGCCGCTGAGAGACTCATC 60.299 63.158 5.02 0.44 39.92 2.92
218 219 2.780094 CCGCCGCTGAGAGACTCAT 61.780 63.158 5.02 0.00 39.92 2.90
219 220 3.443925 CCGCCGCTGAGAGACTCA 61.444 66.667 5.02 0.00 38.25 3.41
220 221 4.200283 CCCGCCGCTGAGAGACTC 62.200 72.222 0.00 0.00 0.00 3.36
222 223 4.500116 GACCCGCCGCTGAGAGAC 62.500 72.222 0.00 0.00 0.00 3.36
224 225 3.842923 ATGACCCGCCGCTGAGAG 61.843 66.667 0.00 0.00 0.00 3.20
225 226 4.147449 CATGACCCGCCGCTGAGA 62.147 66.667 0.00 0.00 0.00 3.27
234 235 3.891400 CAATGCCGCCATGACCCG 61.891 66.667 0.00 0.00 0.00 5.28
235 236 2.755469 ACAATGCCGCCATGACCC 60.755 61.111 0.00 0.00 0.00 4.46
236 237 2.491152 CACAATGCCGCCATGACC 59.509 61.111 0.00 0.00 0.00 4.02
237 238 2.202650 GCACAATGCCGCCATGAC 60.203 61.111 0.00 0.00 37.42 3.06
238 239 2.675772 TGCACAATGCCGCCATGA 60.676 55.556 0.00 0.00 44.23 3.07
239 240 2.202690 CTGCACAATGCCGCCATG 60.203 61.111 0.00 0.00 44.23 3.66
240 241 4.137872 GCTGCACAATGCCGCCAT 62.138 61.111 5.98 0.00 45.88 4.40
244 245 2.249557 GACTCAGCTGCACAATGCCG 62.250 60.000 9.47 0.00 44.23 5.69
245 246 0.959372 AGACTCAGCTGCACAATGCC 60.959 55.000 9.47 0.00 44.23 4.40
246 247 0.447011 GAGACTCAGCTGCACAATGC 59.553 55.000 9.47 0.00 45.29 3.56
247 248 0.720027 CGAGACTCAGCTGCACAATG 59.280 55.000 9.47 0.00 0.00 2.82
248 249 0.390866 CCGAGACTCAGCTGCACAAT 60.391 55.000 9.47 0.00 0.00 2.71
249 250 1.005748 CCGAGACTCAGCTGCACAA 60.006 57.895 9.47 0.00 0.00 3.33
250 251 2.653115 CCGAGACTCAGCTGCACA 59.347 61.111 9.47 0.00 0.00 4.57
251 252 2.813042 GCCGAGACTCAGCTGCAC 60.813 66.667 9.47 2.59 0.00 4.57
252 253 4.426112 CGCCGAGACTCAGCTGCA 62.426 66.667 9.47 0.00 0.00 4.41
259 260 4.933064 CATCCGCCGCCGAGACTC 62.933 72.222 0.00 0.00 36.29 3.36
267 268 4.241555 ATCCAGACCATCCGCCGC 62.242 66.667 0.00 0.00 0.00 6.53
268 269 2.280389 CATCCAGACCATCCGCCG 60.280 66.667 0.00 0.00 0.00 6.46
269 270 2.111878 CCATCCAGACCATCCGCC 59.888 66.667 0.00 0.00 0.00 6.13
270 271 1.227674 GTCCATCCAGACCATCCGC 60.228 63.158 0.00 0.00 0.00 5.54
271 272 1.068083 CGTCCATCCAGACCATCCG 59.932 63.158 0.00 0.00 32.91 4.18
272 273 0.390860 CTCGTCCATCCAGACCATCC 59.609 60.000 0.00 0.00 32.91 3.51
273 274 0.249657 GCTCGTCCATCCAGACCATC 60.250 60.000 0.00 0.00 32.91 3.51
274 275 0.977627 TGCTCGTCCATCCAGACCAT 60.978 55.000 0.00 0.00 32.91 3.55
275 276 1.609210 TGCTCGTCCATCCAGACCA 60.609 57.895 0.00 0.00 32.91 4.02
276 277 1.153549 GTGCTCGTCCATCCAGACC 60.154 63.158 0.00 0.00 32.91 3.85
277 278 0.459237 CTGTGCTCGTCCATCCAGAC 60.459 60.000 0.00 0.00 0.00 3.51
278 279 1.607801 CCTGTGCTCGTCCATCCAGA 61.608 60.000 0.00 0.00 0.00 3.86
279 280 1.153489 CCTGTGCTCGTCCATCCAG 60.153 63.158 0.00 0.00 0.00 3.86
280 281 2.659063 CCCTGTGCTCGTCCATCCA 61.659 63.158 0.00 0.00 0.00 3.41
281 282 2.187946 CCCTGTGCTCGTCCATCC 59.812 66.667 0.00 0.00 0.00 3.51
282 283 2.512515 GCCCTGTGCTCGTCCATC 60.513 66.667 0.00 0.00 36.87 3.51
283 284 4.457496 CGCCCTGTGCTCGTCCAT 62.457 66.667 0.00 0.00 38.05 3.41
286 287 4.681978 AACCGCCCTGTGCTCGTC 62.682 66.667 0.00 0.00 38.05 4.20
287 288 4.988598 CAACCGCCCTGTGCTCGT 62.989 66.667 0.00 0.00 38.05 4.18
288 289 4.988598 ACAACCGCCCTGTGCTCG 62.989 66.667 0.00 0.00 38.05 5.03
289 290 3.357079 CACAACCGCCCTGTGCTC 61.357 66.667 0.00 0.00 37.93 4.26
292 293 0.960364 AATAGCACAACCGCCCTGTG 60.960 55.000 5.64 5.64 45.71 3.66
293 294 0.251165 AAATAGCACAACCGCCCTGT 60.251 50.000 0.00 0.00 0.00 4.00
294 295 0.171007 CAAATAGCACAACCGCCCTG 59.829 55.000 0.00 0.00 0.00 4.45
295 296 0.965363 CCAAATAGCACAACCGCCCT 60.965 55.000 0.00 0.00 0.00 5.19
296 297 1.248101 ACCAAATAGCACAACCGCCC 61.248 55.000 0.00 0.00 0.00 6.13
297 298 0.109319 CACCAAATAGCACAACCGCC 60.109 55.000 0.00 0.00 0.00 6.13
298 299 0.596082 ACACCAAATAGCACAACCGC 59.404 50.000 0.00 0.00 0.00 5.68
299 300 1.136085 CGACACCAAATAGCACAACCG 60.136 52.381 0.00 0.00 0.00 4.44
300 301 1.877443 ACGACACCAAATAGCACAACC 59.123 47.619 0.00 0.00 0.00 3.77
301 302 2.350388 CCACGACACCAAATAGCACAAC 60.350 50.000 0.00 0.00 0.00 3.32
302 303 1.876799 CCACGACACCAAATAGCACAA 59.123 47.619 0.00 0.00 0.00 3.33
303 304 1.202710 ACCACGACACCAAATAGCACA 60.203 47.619 0.00 0.00 0.00 4.57
304 305 1.196808 CACCACGACACCAAATAGCAC 59.803 52.381 0.00 0.00 0.00 4.40
305 306 1.070914 TCACCACGACACCAAATAGCA 59.929 47.619 0.00 0.00 0.00 3.49
306 307 1.463444 GTCACCACGACACCAAATAGC 59.537 52.381 0.00 0.00 44.69 2.97
319 320 2.016704 CTGCTGTCGACGTCACCAC 61.017 63.158 17.16 9.22 0.00 4.16
320 321 1.524008 ATCTGCTGTCGACGTCACCA 61.524 55.000 17.16 10.04 0.00 4.17
321 322 1.073216 CATCTGCTGTCGACGTCACC 61.073 60.000 17.16 5.41 0.00 4.02
322 323 0.109735 TCATCTGCTGTCGACGTCAC 60.110 55.000 17.16 13.04 0.00 3.67
323 324 0.169009 CTCATCTGCTGTCGACGTCA 59.831 55.000 17.16 10.03 0.00 4.35
324 325 0.448197 TCTCATCTGCTGTCGACGTC 59.552 55.000 11.62 5.18 0.00 4.34
325 326 0.169230 GTCTCATCTGCTGTCGACGT 59.831 55.000 11.62 0.00 0.00 4.34
326 327 0.449786 AGTCTCATCTGCTGTCGACG 59.550 55.000 11.62 7.05 34.11 5.12
327 328 1.468908 CCAGTCTCATCTGCTGTCGAC 60.469 57.143 9.11 9.11 34.47 4.20
328 329 0.813821 CCAGTCTCATCTGCTGTCGA 59.186 55.000 0.00 0.00 34.47 4.20
329 330 0.805322 GCCAGTCTCATCTGCTGTCG 60.805 60.000 0.00 0.00 34.47 4.35
330 331 0.248565 TGCCAGTCTCATCTGCTGTC 59.751 55.000 0.00 0.00 34.47 3.51
331 332 0.689055 TTGCCAGTCTCATCTGCTGT 59.311 50.000 0.00 0.00 34.47 4.40
332 333 1.066358 TCTTGCCAGTCTCATCTGCTG 60.066 52.381 0.00 0.00 34.47 4.41
333 334 1.273759 TCTTGCCAGTCTCATCTGCT 58.726 50.000 0.00 0.00 34.47 4.24
334 335 2.158928 AGATCTTGCCAGTCTCATCTGC 60.159 50.000 0.00 0.00 34.47 4.26
335 336 3.823281 AGATCTTGCCAGTCTCATCTG 57.177 47.619 0.00 0.00 35.45 2.90
336 337 4.262549 GCATAGATCTTGCCAGTCTCATCT 60.263 45.833 15.07 0.00 33.95 2.90
337 338 3.995705 GCATAGATCTTGCCAGTCTCATC 59.004 47.826 15.07 0.00 33.95 2.92
338 339 3.390311 TGCATAGATCTTGCCAGTCTCAT 59.610 43.478 20.15 0.00 39.39 2.90
339 340 2.767960 TGCATAGATCTTGCCAGTCTCA 59.232 45.455 20.15 4.51 39.39 3.27
340 341 3.465742 TGCATAGATCTTGCCAGTCTC 57.534 47.619 20.15 0.99 39.39 3.36
341 342 3.920231 TTGCATAGATCTTGCCAGTCT 57.080 42.857 20.15 0.00 39.39 3.24
342 343 4.024218 GTCATTGCATAGATCTTGCCAGTC 60.024 45.833 20.15 9.32 39.39 3.51
343 344 3.881688 GTCATTGCATAGATCTTGCCAGT 59.118 43.478 20.15 8.91 39.39 4.00
344 345 3.252701 GGTCATTGCATAGATCTTGCCAG 59.747 47.826 20.15 13.09 39.39 4.85
345 346 3.216800 GGTCATTGCATAGATCTTGCCA 58.783 45.455 20.15 13.53 39.39 4.92
346 347 2.555757 GGGTCATTGCATAGATCTTGCC 59.444 50.000 20.15 9.64 39.39 4.52
347 348 2.555757 GGGGTCATTGCATAGATCTTGC 59.444 50.000 17.68 17.68 40.55 4.01
348 349 4.070716 GAGGGGTCATTGCATAGATCTTG 58.929 47.826 0.00 0.32 0.00 3.02
349 350 3.073650 GGAGGGGTCATTGCATAGATCTT 59.926 47.826 0.00 0.00 0.00 2.40
350 351 2.641815 GGAGGGGTCATTGCATAGATCT 59.358 50.000 0.00 0.00 0.00 2.75
351 352 2.641815 AGGAGGGGTCATTGCATAGATC 59.358 50.000 0.00 0.00 0.00 2.75
352 353 2.374504 CAGGAGGGGTCATTGCATAGAT 59.625 50.000 0.00 0.00 0.00 1.98
353 354 1.770658 CAGGAGGGGTCATTGCATAGA 59.229 52.381 0.00 0.00 0.00 1.98
354 355 1.770658 TCAGGAGGGGTCATTGCATAG 59.229 52.381 0.00 0.00 0.00 2.23
355 356 1.891933 TCAGGAGGGGTCATTGCATA 58.108 50.000 0.00 0.00 0.00 3.14
356 357 1.002069 TTCAGGAGGGGTCATTGCAT 58.998 50.000 0.00 0.00 0.00 3.96
357 358 0.329261 CTTCAGGAGGGGTCATTGCA 59.671 55.000 0.00 0.00 0.00 4.08
358 359 0.620556 TCTTCAGGAGGGGTCATTGC 59.379 55.000 0.00 0.00 0.00 3.56
359 360 2.422519 CCATCTTCAGGAGGGGTCATTG 60.423 54.545 0.00 0.00 41.74 2.82
360 361 1.849039 CCATCTTCAGGAGGGGTCATT 59.151 52.381 0.00 0.00 41.74 2.57
361 362 1.516110 CCATCTTCAGGAGGGGTCAT 58.484 55.000 0.00 0.00 41.74 3.06
362 363 3.012153 CCATCTTCAGGAGGGGTCA 57.988 57.895 0.00 0.00 41.74 4.02
366 367 1.826024 CGTCCCATCTTCAGGAGGG 59.174 63.158 0.00 0.00 44.73 4.30
367 368 1.826024 CCGTCCCATCTTCAGGAGG 59.174 63.158 0.00 0.00 37.70 4.30
368 369 1.144936 GCCGTCCCATCTTCAGGAG 59.855 63.158 0.00 0.00 31.17 3.69
369 370 2.721167 CGCCGTCCCATCTTCAGGA 61.721 63.158 0.00 0.00 0.00 3.86
370 371 2.202932 CGCCGTCCCATCTTCAGG 60.203 66.667 0.00 0.00 0.00 3.86
371 372 2.202932 CCGCCGTCCCATCTTCAG 60.203 66.667 0.00 0.00 0.00 3.02
372 373 2.238847 CTTCCGCCGTCCCATCTTCA 62.239 60.000 0.00 0.00 0.00 3.02
373 374 1.521681 CTTCCGCCGTCCCATCTTC 60.522 63.158 0.00 0.00 0.00 2.87
374 375 1.338136 ATCTTCCGCCGTCCCATCTT 61.338 55.000 0.00 0.00 0.00 2.40
375 376 1.762460 ATCTTCCGCCGTCCCATCT 60.762 57.895 0.00 0.00 0.00 2.90
376 377 1.595382 CATCTTCCGCCGTCCCATC 60.595 63.158 0.00 0.00 0.00 3.51
377 378 2.505982 CATCTTCCGCCGTCCCAT 59.494 61.111 0.00 0.00 0.00 4.00
378 379 3.781307 CCATCTTCCGCCGTCCCA 61.781 66.667 0.00 0.00 0.00 4.37
380 381 4.467084 TGCCATCTTCCGCCGTCC 62.467 66.667 0.00 0.00 0.00 4.79
381 382 2.892425 CTGCCATCTTCCGCCGTC 60.892 66.667 0.00 0.00 0.00 4.79
387 388 2.955022 ATCTGCCGCTGCCATCTTCC 62.955 60.000 0.00 0.00 36.33 3.46
388 389 1.505477 GATCTGCCGCTGCCATCTTC 61.505 60.000 0.00 0.00 36.33 2.87
389 390 1.525535 GATCTGCCGCTGCCATCTT 60.526 57.895 0.00 0.00 36.33 2.40
390 391 2.110627 GATCTGCCGCTGCCATCT 59.889 61.111 0.00 0.00 36.33 2.90
391 392 2.104572 TAGGATCTGCCGCTGCCATC 62.105 60.000 0.00 0.00 43.43 3.51
392 393 2.142761 TAGGATCTGCCGCTGCCAT 61.143 57.895 0.00 0.00 43.43 4.40
393 394 2.763710 TAGGATCTGCCGCTGCCA 60.764 61.111 0.00 0.00 43.43 4.92
394 395 2.280457 GTAGGATCTGCCGCTGCC 60.280 66.667 0.00 0.00 43.43 4.85
395 396 1.153369 TTGTAGGATCTGCCGCTGC 60.153 57.895 0.00 0.00 43.43 5.25
396 397 1.148157 CGTTGTAGGATCTGCCGCTG 61.148 60.000 0.00 0.00 43.43 5.18
397 398 1.141881 CGTTGTAGGATCTGCCGCT 59.858 57.895 0.00 0.00 43.43 5.52
398 399 1.153628 ACGTTGTAGGATCTGCCGC 60.154 57.895 0.00 0.00 43.43 6.53
399 400 1.421410 GCACGTTGTAGGATCTGCCG 61.421 60.000 0.00 0.00 43.43 5.69
400 401 1.421410 CGCACGTTGTAGGATCTGCC 61.421 60.000 0.00 0.00 0.00 4.85
401 402 1.999051 CGCACGTTGTAGGATCTGC 59.001 57.895 0.00 0.00 0.00 4.26
402 403 0.735978 TGCGCACGTTGTAGGATCTG 60.736 55.000 5.66 0.00 0.00 2.90
403 404 0.175760 ATGCGCACGTTGTAGGATCT 59.824 50.000 14.90 0.00 0.00 2.75
404 405 0.301687 CATGCGCACGTTGTAGGATC 59.698 55.000 14.90 0.00 0.00 3.36
405 406 1.705337 GCATGCGCACGTTGTAGGAT 61.705 55.000 14.90 0.00 38.36 3.24
406 407 2.387445 GCATGCGCACGTTGTAGGA 61.387 57.895 14.90 0.00 38.36 2.94
407 408 2.098298 GCATGCGCACGTTGTAGG 59.902 61.111 14.90 0.00 38.36 3.18
408 409 2.859580 TGCATGCGCACGTTGTAG 59.140 55.556 14.90 0.00 45.36 2.74
425 426 1.586028 GCGTCCCACAATGCACATT 59.414 52.632 0.00 0.00 0.00 2.71
426 427 2.342650 GGCGTCCCACAATGCACAT 61.343 57.895 0.00 0.00 32.61 3.21
427 428 2.118233 TAGGCGTCCCACAATGCACA 62.118 55.000 0.00 0.00 32.61 4.57
428 429 1.369091 CTAGGCGTCCCACAATGCAC 61.369 60.000 0.00 0.00 32.61 4.57
429 430 1.078497 CTAGGCGTCCCACAATGCA 60.078 57.895 0.00 0.00 32.61 3.96
430 431 1.090052 GTCTAGGCGTCCCACAATGC 61.090 60.000 0.00 0.00 0.00 3.56
431 432 0.462047 GGTCTAGGCGTCCCACAATG 60.462 60.000 0.00 0.00 0.00 2.82
432 433 1.905512 GGTCTAGGCGTCCCACAAT 59.094 57.895 0.00 0.00 0.00 2.71
433 434 2.642254 CGGTCTAGGCGTCCCACAA 61.642 63.158 0.00 0.00 0.00 3.33
434 435 3.066190 CGGTCTAGGCGTCCCACA 61.066 66.667 0.00 0.00 0.00 4.17
435 436 3.834799 CCGGTCTAGGCGTCCCAC 61.835 72.222 0.00 0.00 0.00 4.61
436 437 3.892104 AACCGGTCTAGGCGTCCCA 62.892 63.158 8.04 0.00 33.69 4.37
437 438 3.073101 AACCGGTCTAGGCGTCCC 61.073 66.667 8.04 0.00 33.69 4.46
438 439 2.183555 CAACCGGTCTAGGCGTCC 59.816 66.667 8.04 0.00 33.69 4.79
439 440 2.183555 CCAACCGGTCTAGGCGTC 59.816 66.667 8.04 0.00 33.69 5.19
440 441 2.602568 ACCAACCGGTCTAGGCGT 60.603 61.111 8.04 0.00 44.71 5.68
449 450 1.831652 AAGCAGAGAGGACCAACCGG 61.832 60.000 0.00 0.00 44.74 5.28
450 451 0.671781 CAAGCAGAGAGGACCAACCG 60.672 60.000 0.00 0.00 44.74 4.44
451 452 0.398318 ACAAGCAGAGAGGACCAACC 59.602 55.000 0.00 0.00 39.35 3.77
452 453 1.070758 TGACAAGCAGAGAGGACCAAC 59.929 52.381 0.00 0.00 0.00 3.77
453 454 1.423584 TGACAAGCAGAGAGGACCAA 58.576 50.000 0.00 0.00 0.00 3.67
454 455 3.147826 TGACAAGCAGAGAGGACCA 57.852 52.632 0.00 0.00 0.00 4.02
463 464 3.114616 CGTCCGCCTGACAAGCAG 61.115 66.667 0.00 0.00 44.71 4.24
464 465 4.680237 CCGTCCGCCTGACAAGCA 62.680 66.667 0.00 0.00 44.71 3.91
466 467 2.501223 TAAGCCGTCCGCCTGACAAG 62.501 60.000 2.37 0.00 44.71 3.16
467 468 1.895020 ATAAGCCGTCCGCCTGACAA 61.895 55.000 2.37 0.00 44.71 3.18
468 469 1.895020 AATAAGCCGTCCGCCTGACA 61.895 55.000 2.37 0.00 44.71 3.58
469 470 1.153429 AATAAGCCGTCCGCCTGAC 60.153 57.895 0.00 0.00 40.81 3.51
470 471 1.153449 CAATAAGCCGTCCGCCTGA 60.153 57.895 0.00 0.00 38.78 3.86
471 472 1.153449 TCAATAAGCCGTCCGCCTG 60.153 57.895 0.00 0.00 38.78 4.85
472 473 1.144057 CTCAATAAGCCGTCCGCCT 59.856 57.895 0.00 0.00 38.78 5.52
473 474 1.887707 CCTCAATAAGCCGTCCGCC 60.888 63.158 0.00 0.00 38.78 6.13
474 475 2.534903 GCCTCAATAAGCCGTCCGC 61.535 63.158 0.00 0.00 37.98 5.54
475 476 1.887707 GGCCTCAATAAGCCGTCCG 60.888 63.158 0.00 0.00 39.87 4.79
476 477 4.142780 GGCCTCAATAAGCCGTCC 57.857 61.111 0.00 0.00 39.87 4.79
481 482 5.072741 TCTAATCCAATGGCCTCAATAAGC 58.927 41.667 3.32 0.00 0.00 3.09
482 483 7.309621 CCATTCTAATCCAATGGCCTCAATAAG 60.310 40.741 3.32 0.00 42.99 1.73
483 484 6.494491 CCATTCTAATCCAATGGCCTCAATAA 59.506 38.462 3.32 0.00 42.99 1.40
484 485 6.012113 CCATTCTAATCCAATGGCCTCAATA 58.988 40.000 3.32 0.00 42.99 1.90
485 486 4.836736 CCATTCTAATCCAATGGCCTCAAT 59.163 41.667 3.32 0.00 42.99 2.57
486 487 4.217510 CCATTCTAATCCAATGGCCTCAA 58.782 43.478 3.32 0.00 42.99 3.02
487 488 3.836146 CCATTCTAATCCAATGGCCTCA 58.164 45.455 3.32 0.00 42.99 3.86
493 494 4.885907 AGCAGACACCATTCTAATCCAATG 59.114 41.667 0.00 0.00 0.00 2.82
494 495 4.885907 CAGCAGACACCATTCTAATCCAAT 59.114 41.667 0.00 0.00 0.00 3.16
495 496 4.019411 TCAGCAGACACCATTCTAATCCAA 60.019 41.667 0.00 0.00 0.00 3.53
496 497 3.519107 TCAGCAGACACCATTCTAATCCA 59.481 43.478 0.00 0.00 0.00 3.41
497 498 4.142609 TCAGCAGACACCATTCTAATCC 57.857 45.455 0.00 0.00 0.00 3.01
498 499 4.024218 GCATCAGCAGACACCATTCTAATC 60.024 45.833 0.00 0.00 41.58 1.75
499 500 3.881688 GCATCAGCAGACACCATTCTAAT 59.118 43.478 0.00 0.00 41.58 1.73
500 501 3.273434 GCATCAGCAGACACCATTCTAA 58.727 45.455 0.00 0.00 41.58 2.10
501 502 2.910199 GCATCAGCAGACACCATTCTA 58.090 47.619 0.00 0.00 41.58 2.10
502 503 1.747709 GCATCAGCAGACACCATTCT 58.252 50.000 0.00 0.00 41.58 2.40
521 522 1.389555 AGATGTGCCATGCATGACTG 58.610 50.000 28.31 12.47 41.91 3.51
522 523 2.139323 AAGATGTGCCATGCATGACT 57.861 45.000 28.31 12.99 41.91 3.41
523 524 2.953466 AAAGATGTGCCATGCATGAC 57.047 45.000 28.31 17.77 41.91 3.06
524 525 5.379187 AGTATAAAGATGTGCCATGCATGA 58.621 37.500 28.31 8.35 41.91 3.07
525 526 5.700722 AGTATAAAGATGTGCCATGCATG 57.299 39.130 20.19 20.19 41.91 4.06
526 527 5.595542 ACAAGTATAAAGATGTGCCATGCAT 59.404 36.000 0.00 0.00 41.91 3.96
527 528 4.949238 ACAAGTATAAAGATGTGCCATGCA 59.051 37.500 0.00 0.00 35.60 3.96
528 529 5.505173 ACAAGTATAAAGATGTGCCATGC 57.495 39.130 0.00 0.00 0.00 4.06
529 530 6.767902 ACCTACAAGTATAAAGATGTGCCATG 59.232 38.462 0.00 0.00 0.00 3.66
530 531 6.767902 CACCTACAAGTATAAAGATGTGCCAT 59.232 38.462 0.00 0.00 0.00 4.40
531 532 6.112734 CACCTACAAGTATAAAGATGTGCCA 58.887 40.000 0.00 0.00 0.00 4.92
532 533 6.113411 ACACCTACAAGTATAAAGATGTGCC 58.887 40.000 0.00 0.00 0.00 5.01
533 534 7.042658 GCTACACCTACAAGTATAAAGATGTGC 60.043 40.741 0.00 0.00 0.00 4.57
534 535 7.979537 TGCTACACCTACAAGTATAAAGATGTG 59.020 37.037 0.00 0.00 0.00 3.21
535 536 8.074613 TGCTACACCTACAAGTATAAAGATGT 57.925 34.615 0.00 0.00 0.00 3.06
536 537 8.818057 GTTGCTACACCTACAAGTATAAAGATG 58.182 37.037 0.00 0.00 0.00 2.90
537 538 8.759782 AGTTGCTACACCTACAAGTATAAAGAT 58.240 33.333 0.13 0.00 0.00 2.40
538 539 8.130671 AGTTGCTACACCTACAAGTATAAAGA 57.869 34.615 0.13 0.00 0.00 2.52
539 540 8.773404 AAGTTGCTACACCTACAAGTATAAAG 57.227 34.615 0.13 0.00 0.00 1.85
543 544 9.379791 GAATAAAGTTGCTACACCTACAAGTAT 57.620 33.333 0.13 0.00 0.00 2.12
544 545 7.543172 CGAATAAAGTTGCTACACCTACAAGTA 59.457 37.037 0.13 0.00 0.00 2.24
545 546 6.367969 CGAATAAAGTTGCTACACCTACAAGT 59.632 38.462 0.13 0.00 0.00 3.16
546 547 6.367969 ACGAATAAAGTTGCTACACCTACAAG 59.632 38.462 0.13 0.00 0.00 3.16
547 548 6.225318 ACGAATAAAGTTGCTACACCTACAA 58.775 36.000 0.13 0.00 0.00 2.41
548 549 5.786311 ACGAATAAAGTTGCTACACCTACA 58.214 37.500 0.13 0.00 0.00 2.74
549 550 6.098017 AGACGAATAAAGTTGCTACACCTAC 58.902 40.000 0.13 0.00 0.00 3.18
550 551 6.276832 AGACGAATAAAGTTGCTACACCTA 57.723 37.500 0.13 0.00 0.00 3.08
551 552 5.148651 AGACGAATAAAGTTGCTACACCT 57.851 39.130 0.13 0.00 0.00 4.00
552 553 4.031426 CGAGACGAATAAAGTTGCTACACC 59.969 45.833 0.13 0.00 0.00 4.16
553 554 4.855388 TCGAGACGAATAAAGTTGCTACAC 59.145 41.667 0.13 0.00 31.06 2.90
554 555 5.050644 TCGAGACGAATAAAGTTGCTACA 57.949 39.130 0.13 0.00 31.06 2.74
555 556 5.572126 ACTTCGAGACGAATAAAGTTGCTAC 59.428 40.000 7.03 0.00 44.85 3.58
556 557 5.706916 ACTTCGAGACGAATAAAGTTGCTA 58.293 37.500 7.03 0.00 44.85 3.49
557 558 4.557205 ACTTCGAGACGAATAAAGTTGCT 58.443 39.130 7.03 0.00 44.85 3.91
558 559 4.905412 ACTTCGAGACGAATAAAGTTGC 57.095 40.909 7.03 0.00 44.85 4.17
559 560 6.074516 TGACAACTTCGAGACGAATAAAGTTG 60.075 38.462 22.75 22.75 45.14 3.16
560 561 5.981315 TGACAACTTCGAGACGAATAAAGTT 59.019 36.000 7.03 5.34 44.85 2.66
561 562 5.526115 TGACAACTTCGAGACGAATAAAGT 58.474 37.500 7.03 4.62 44.85 2.66
562 563 5.061064 CCTGACAACTTCGAGACGAATAAAG 59.939 44.000 7.03 0.00 44.85 1.85
563 564 4.921515 CCTGACAACTTCGAGACGAATAAA 59.078 41.667 7.03 0.00 44.85 1.40
564 565 4.482386 CCTGACAACTTCGAGACGAATAA 58.518 43.478 7.03 0.00 44.85 1.40
565 566 3.672511 GCCTGACAACTTCGAGACGAATA 60.673 47.826 7.03 0.00 44.85 1.75
566 567 2.927014 GCCTGACAACTTCGAGACGAAT 60.927 50.000 7.03 0.00 44.85 3.34
567 568 1.602165 GCCTGACAACTTCGAGACGAA 60.602 52.381 6.43 6.43 43.75 3.85
568 569 0.039437 GCCTGACAACTTCGAGACGA 60.039 55.000 0.00 0.00 0.00 4.20
569 570 0.039074 AGCCTGACAACTTCGAGACG 60.039 55.000 0.00 0.00 0.00 4.18
570 571 1.271102 AGAGCCTGACAACTTCGAGAC 59.729 52.381 0.00 0.00 0.00 3.36
571 572 1.621992 AGAGCCTGACAACTTCGAGA 58.378 50.000 0.00 0.00 0.00 4.04
572 573 3.577649 TTAGAGCCTGACAACTTCGAG 57.422 47.619 0.00 0.00 0.00 4.04
573 574 5.654603 TTATTAGAGCCTGACAACTTCGA 57.345 39.130 0.00 0.00 0.00 3.71
574 575 6.910536 ATTTATTAGAGCCTGACAACTTCG 57.089 37.500 0.00 0.00 0.00 3.79
599 600 9.602568 TGATGCATGCAGTCATTTTTATTAATT 57.397 25.926 26.69 2.00 0.00 1.40
600 601 9.256477 CTGATGCATGCAGTCATTTTTATTAAT 57.744 29.630 26.69 2.43 0.00 1.40
601 602 8.252417 ACTGATGCATGCAGTCATTTTTATTAA 58.748 29.630 26.69 0.00 42.62 1.40
602 603 7.774134 ACTGATGCATGCAGTCATTTTTATTA 58.226 30.769 26.69 0.68 42.62 0.98
603 604 6.636705 ACTGATGCATGCAGTCATTTTTATT 58.363 32.000 26.69 3.90 42.62 1.40
604 605 6.216801 ACTGATGCATGCAGTCATTTTTAT 57.783 33.333 26.69 4.49 42.62 1.40
605 606 5.648178 ACTGATGCATGCAGTCATTTTTA 57.352 34.783 26.69 2.97 42.62 1.52
606 607 4.530710 ACTGATGCATGCAGTCATTTTT 57.469 36.364 26.69 6.16 42.62 1.94
607 608 4.530710 AACTGATGCATGCAGTCATTTT 57.469 36.364 26.69 18.75 45.27 1.82
608 609 4.021807 TCAAACTGATGCATGCAGTCATTT 60.022 37.500 26.69 22.39 45.27 2.32
609 610 3.508402 TCAAACTGATGCATGCAGTCATT 59.492 39.130 26.69 18.58 45.27 2.57
610 611 3.086282 TCAAACTGATGCATGCAGTCAT 58.914 40.909 26.69 9.13 45.27 3.06
611 612 2.506444 TCAAACTGATGCATGCAGTCA 58.494 42.857 26.69 24.30 45.27 3.41
612 613 3.435566 CATCAAACTGATGCATGCAGTC 58.564 45.455 26.69 21.41 46.37 3.51
613 614 3.503827 CATCAAACTGATGCATGCAGT 57.496 42.857 26.69 15.72 46.37 4.40
622 623 1.760192 GCCCTCTGCATCAAACTGAT 58.240 50.000 0.00 0.00 37.65 2.90
623 624 0.674581 CGCCCTCTGCATCAAACTGA 60.675 55.000 0.00 0.00 41.33 3.41
624 625 1.651240 CCGCCCTCTGCATCAAACTG 61.651 60.000 0.00 0.00 41.33 3.16
625 626 1.377725 CCGCCCTCTGCATCAAACT 60.378 57.895 0.00 0.00 41.33 2.66
626 627 2.409870 CCCGCCCTCTGCATCAAAC 61.410 63.158 0.00 0.00 41.33 2.93
627 628 2.045045 CCCGCCCTCTGCATCAAA 60.045 61.111 0.00 0.00 41.33 2.69
628 629 4.113815 CCCCGCCCTCTGCATCAA 62.114 66.667 0.00 0.00 41.33 2.57
629 630 3.993865 TACCCCGCCCTCTGCATCA 62.994 63.158 0.00 0.00 41.33 3.07
630 631 2.056906 ATTACCCCGCCCTCTGCATC 62.057 60.000 0.00 0.00 41.33 3.91
631 632 2.056906 GATTACCCCGCCCTCTGCAT 62.057 60.000 0.00 0.00 41.33 3.96
632 633 2.690881 ATTACCCCGCCCTCTGCA 60.691 61.111 0.00 0.00 41.33 4.41
633 634 1.984288 AAGATTACCCCGCCCTCTGC 61.984 60.000 0.00 0.00 0.00 4.26
634 635 0.546598 AAAGATTACCCCGCCCTCTG 59.453 55.000 0.00 0.00 0.00 3.35
635 636 0.837940 GAAAGATTACCCCGCCCTCT 59.162 55.000 0.00 0.00 0.00 3.69
636 637 0.837940 AGAAAGATTACCCCGCCCTC 59.162 55.000 0.00 0.00 0.00 4.30
637 638 1.296002 AAGAAAGATTACCCCGCCCT 58.704 50.000 0.00 0.00 0.00 5.19
638 639 2.139323 AAAGAAAGATTACCCCGCCC 57.861 50.000 0.00 0.00 0.00 6.13
639 640 6.947644 TTATAAAAGAAAGATTACCCCGCC 57.052 37.500 0.00 0.00 0.00 6.13
662 663 2.031508 CCACGCACTTACACGGATTTTT 60.032 45.455 0.00 0.00 0.00 1.94
663 664 1.533731 CCACGCACTTACACGGATTTT 59.466 47.619 0.00 0.00 0.00 1.82
664 665 1.153353 CCACGCACTTACACGGATTT 58.847 50.000 0.00 0.00 0.00 2.17
665 666 1.296056 GCCACGCACTTACACGGATT 61.296 55.000 0.00 0.00 0.00 3.01
666 667 1.740296 GCCACGCACTTACACGGAT 60.740 57.895 0.00 0.00 0.00 4.18
667 668 2.356553 GCCACGCACTTACACGGA 60.357 61.111 0.00 0.00 0.00 4.69
668 669 1.573829 AATGCCACGCACTTACACGG 61.574 55.000 0.00 0.00 43.04 4.94
669 670 0.179225 GAATGCCACGCACTTACACG 60.179 55.000 0.00 0.00 43.04 4.49
670 671 0.179225 CGAATGCCACGCACTTACAC 60.179 55.000 0.00 0.00 43.04 2.90
671 672 0.601576 ACGAATGCCACGCACTTACA 60.602 50.000 0.00 0.00 43.04 2.41
672 673 0.515564 AACGAATGCCACGCACTTAC 59.484 50.000 0.00 0.00 43.04 2.34
673 674 0.793861 GAACGAATGCCACGCACTTA 59.206 50.000 0.00 0.00 43.04 2.24
674 675 1.163420 TGAACGAATGCCACGCACTT 61.163 50.000 0.00 0.00 43.04 3.16
675 676 1.163420 TTGAACGAATGCCACGCACT 61.163 50.000 0.00 0.00 43.04 4.40
676 677 0.317436 TTTGAACGAATGCCACGCAC 60.317 50.000 0.00 0.00 43.04 5.34
677 678 0.382158 TTTTGAACGAATGCCACGCA 59.618 45.000 0.00 0.00 44.86 5.24
678 679 1.482278 TTTTTGAACGAATGCCACGC 58.518 45.000 0.00 0.00 0.00 5.34
703 704 1.924524 CGACCAATGCTACACTTACGG 59.075 52.381 0.00 0.00 0.00 4.02
705 706 2.671396 CCACGACCAATGCTACACTTAC 59.329 50.000 0.00 0.00 0.00 2.34
787 788 2.681848 CTGTATGTCCGGTAGTCTTCGT 59.318 50.000 0.00 0.00 0.00 3.85
806 807 4.542735 GGGAATTAACAACGGAACAACTG 58.457 43.478 0.00 0.00 0.00 3.16
922 933 5.054477 CCCGATGATAGATACCGTTTTGTT 58.946 41.667 0.00 0.00 0.00 2.83
925 936 3.070446 TGCCCGATGATAGATACCGTTTT 59.930 43.478 0.00 0.00 0.00 2.43
976 990 2.597510 GGGTGTGGCGAGCCTTTT 60.598 61.111 15.75 0.00 36.94 2.27
1014 1028 4.636206 AGAACCAGCGATTAGATTGGAAAC 59.364 41.667 0.00 0.00 34.76 2.78
1038 1058 1.154197 GGTTGGTTGTACGGAGAAGC 58.846 55.000 0.00 0.00 0.00 3.86
1040 1060 2.028748 GCTAGGTTGGTTGTACGGAGAA 60.029 50.000 0.00 0.00 0.00 2.87
1041 1061 1.547372 GCTAGGTTGGTTGTACGGAGA 59.453 52.381 0.00 0.00 0.00 3.71
1043 1063 0.609662 GGCTAGGTTGGTTGTACGGA 59.390 55.000 0.00 0.00 0.00 4.69
1044 1064 0.322322 TGGCTAGGTTGGTTGTACGG 59.678 55.000 0.00 0.00 0.00 4.02
1046 1066 2.565834 TCTCTGGCTAGGTTGGTTGTAC 59.434 50.000 0.00 0.00 0.00 2.90
1047 1067 2.897350 TCTCTGGCTAGGTTGGTTGTA 58.103 47.619 0.00 0.00 0.00 2.41
1048 1068 1.729586 TCTCTGGCTAGGTTGGTTGT 58.270 50.000 0.00 0.00 0.00 3.32
1049 1069 2.739932 CGATCTCTGGCTAGGTTGGTTG 60.740 54.545 0.00 0.00 0.00 3.77
1050 1070 1.482593 CGATCTCTGGCTAGGTTGGTT 59.517 52.381 0.00 0.00 0.00 3.67
1051 1071 1.115467 CGATCTCTGGCTAGGTTGGT 58.885 55.000 0.00 0.00 0.00 3.67
1052 1072 1.067821 GACGATCTCTGGCTAGGTTGG 59.932 57.143 0.00 0.00 0.00 3.77
1053 1073 1.268794 CGACGATCTCTGGCTAGGTTG 60.269 57.143 0.00 0.00 0.00 3.77
1337 1363 2.124693 GTAGAGGAGGAGCTGCGCT 61.125 63.158 9.73 2.68 43.88 5.92
1454 1480 3.969976 CCTTGAAGATCTCCTCCATGGTA 59.030 47.826 12.58 0.00 37.07 3.25
1537 1563 1.269166 GGCGTTGTAGATGACGAGTG 58.731 55.000 0.00 0.00 41.53 3.51
2024 2051 0.313987 CCTGTGTCTCGTACTGCACA 59.686 55.000 0.00 0.00 39.21 4.57
2046 2077 7.281484 GTTTAAGCACATGCATACGTAGATAC 58.719 38.462 6.64 0.00 45.16 2.24
2047 2078 6.422701 GGTTTAAGCACATGCATACGTAGATA 59.577 38.462 6.64 0.00 45.16 1.98
2078 2162 2.679336 TGCATGAGATTGATGGAACGTG 59.321 45.455 0.00 0.00 0.00 4.49
2084 2168 3.942130 ATGCATGCATGAGATTGATGG 57.058 42.857 31.74 0.00 35.03 3.51
2115 2254 3.734463 TGATTCTTGAACCTACACGCAA 58.266 40.909 0.00 0.00 0.00 4.85
2235 2384 1.424493 CGGCCATCTTCTGCTCGAAC 61.424 60.000 2.24 0.00 0.00 3.95
2544 2702 2.850130 TTGTACACCCCGGCCACT 60.850 61.111 2.24 0.00 0.00 4.00
2685 2843 2.673368 GACGAGTCTTGGCACCAAATAG 59.327 50.000 3.29 0.00 35.33 1.73
2686 2844 2.037902 TGACGAGTCTTGGCACCAAATA 59.962 45.455 3.29 0.00 35.33 1.40
2718 2916 9.927081 AAACATCTGGGATATTCATAGTTCTTT 57.073 29.630 0.00 0.00 0.00 2.52
2730 2928 8.860088 GCAACCTAATAAAAACATCTGGGATAT 58.140 33.333 0.00 0.00 0.00 1.63
2731 2929 8.058847 AGCAACCTAATAAAAACATCTGGGATA 58.941 33.333 0.00 0.00 0.00 2.59
2732 2930 6.897413 AGCAACCTAATAAAAACATCTGGGAT 59.103 34.615 0.00 0.00 0.00 3.85
2733 2931 6.252995 AGCAACCTAATAAAAACATCTGGGA 58.747 36.000 0.00 0.00 0.00 4.37
2734 2932 6.530019 AGCAACCTAATAAAAACATCTGGG 57.470 37.500 0.00 0.00 0.00 4.45
2735 2933 9.573133 CTAAAGCAACCTAATAAAAACATCTGG 57.427 33.333 0.00 0.00 0.00 3.86
2736 2934 9.573133 CCTAAAGCAACCTAATAAAAACATCTG 57.427 33.333 0.00 0.00 0.00 2.90
2738 2936 7.491372 GCCCTAAAGCAACCTAATAAAAACATC 59.509 37.037 0.00 0.00 0.00 3.06
2743 2941 4.712829 GGGCCCTAAAGCAACCTAATAAAA 59.287 41.667 17.04 0.00 0.00 1.52
2744 2942 4.283337 GGGCCCTAAAGCAACCTAATAAA 58.717 43.478 17.04 0.00 0.00 1.40
2746 2944 2.158726 CGGGCCCTAAAGCAACCTAATA 60.159 50.000 22.43 0.00 0.00 0.98
2780 2978 9.664332 CATCTGGGATATCCATAGTTCTTTAAG 57.336 37.037 23.27 3.53 46.01 1.85
2794 2994 5.041191 AGTGGACAAACATCTGGGATATC 57.959 43.478 0.00 0.00 0.00 1.63
2831 3031 7.936584 ACAATACTTCAGGAAAATGTTCGAAA 58.063 30.769 0.00 0.00 34.28 3.46
2907 3168 5.661312 GCCCTTTTTATATGGGGAGAACTTT 59.339 40.000 0.00 0.00 40.77 2.66
2909 3170 4.231890 TGCCCTTTTTATATGGGGAGAACT 59.768 41.667 0.00 0.00 40.77 3.01
2916 3177 4.827284 AGATCGTTGCCCTTTTTATATGGG 59.173 41.667 0.00 0.00 42.83 4.00
3187 4336 4.406173 CCGTGAGCTGCGACGTCT 62.406 66.667 20.51 0.00 33.66 4.18
3685 5323 2.099427 GCTACAACCGTCAACCCAAAAA 59.901 45.455 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.